BLASTX nr result

ID: Forsythia22_contig00060384 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Forsythia22_contig00060384
         (295 letters)

Database: ./nr 
           69,698,275 sequences; 24,982,196,650 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|YP_004222366.1| hypothetical protein BevumaM_p133 [Beta vulg...    56   3e-12
gb|KJB06854.1| hypothetical protein B456_001G165200 [Gossypium r...    65   2e-08

>ref|YP_004222366.1| hypothetical protein BevumaM_p133 [Beta vulgaris subsp. maritima]
           gi|346683239|ref|YP_004842171.1| hypothetical protein
           BemaM_p127 [Beta macrocarpa]
           gi|317905598|emb|CBX33217.1| hypothetical protein [Beta
           vulgaris subsp. maritima] gi|319439881|emb|CBX33312.1|
           hypothetical protein [Beta vulgaris subsp. maritima]
           gi|320148035|emb|CBJ20699.1| hypothetical protein [Beta
           vulgaris subsp. maritima] gi|345500157|emb|CBX24976.1|
           hypothetical protein [Beta macrocarpa]
           gi|384977917|emb|CBL54141.1| hypothetical protein
           (mitochondrion) [Beta vulgaris subsp. maritima]
          Length = 125

 Score = 56.2 bits (134), Expect(2) = 3e-12
 Identities = 24/30 (80%), Positives = 24/30 (80%)
 Frame = +2

Query: 206 GTEPARGGFTIQCFDPLGYIHPYPHKGLSL 295
           G EPARGGFTI C DPLGYI PYP  GLSL
Sbjct: 29  GIEPARGGFTIHCLDPLGYIRPYPRTGLSL 58



 Score = 41.6 bits (96), Expect(2) = 3e-12
 Identities = 19/29 (65%), Positives = 21/29 (72%)
 Frame = +3

Query: 132 LQKKFFLGLSCFSETNGPFINGRTWGLNP 218
           L KK FLGL C   TNGPFI+GRT G+ P
Sbjct: 4   LLKKCFLGLLCVFVTNGPFIDGRTTGIEP 32


>gb|KJB06854.1| hypothetical protein B456_001G165200 [Gossypium raimondii]
          Length = 70

 Score = 65.1 bits (157), Expect = 2e-08
 Identities = 35/63 (55%), Positives = 35/63 (55%)
 Frame = +2

Query: 107 MSLKASR*LAEKILSRFVLFFRNKWSIY*WENMGTEPARGGFTIQCFDPLGYIHPYPHKG 286
           M LKASR LAEK                     G EPARGGFTI C DPLGYI PYPH G
Sbjct: 1   MRLKASRLLAEKCFLGLSCVSVTNGPFIDGRTTGIEPARGGFTIHCLDPLGYIRPYPHTG 60

Query: 287 LSL 295
           LSL
Sbjct: 61  LSL 63


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