BLASTX nr result

ID: Forsythia22_contig00059939 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Forsythia22_contig00059939
         (373 letters)

Database: ./nr 
           69,698,275 sequences; 24,982,196,650 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_010325540.1| PREDICTED: uncharacterized protein LOC101259...    66   8e-09
ref|XP_009613280.1| PREDICTED: F-box protein At5g03100-like [Nic...    60   6e-07
ref|XP_009795792.1| PREDICTED: F-box protein At5g03100-like [Nic...    60   7e-07
ref|XP_004244414.1| PREDICTED: F-box/LRR-repeat protein At3g0336...    60   7e-07
ref|XP_006358603.1| PREDICTED: probable F-box protein At1g60180-...    58   2e-06
ref|XP_009783054.1| PREDICTED: F-box protein At5g03100-like [Nic...    57   4e-06
ref|XP_009613272.1| PREDICTED: F-box protein At5g03100-like [Nic...    57   4e-06
ref|XP_009804226.1| PREDICTED: putative F-box/LRR-repeat protein...    56   8e-06
ref|XP_009804225.1| PREDICTED: putative F-box/LRR-repeat protein...    56   8e-06

>ref|XP_010325540.1| PREDICTED: uncharacterized protein LOC101259278 isoform X1 [Solanum
           lycopersicum]
          Length = 407

 Score = 66.2 bits (160), Expect = 8e-09
 Identities = 43/113 (38%), Positives = 60/113 (53%), Gaps = 3/113 (2%)
 Frame = -1

Query: 370 GWISPPSSWKHFVVNAHLDKLDTLGIVRLLHSSPIVETVIINRTRVGCSVLLRHLC---S 200
           GW  PPSSWK   ++ HL +LD  GI   L SS  +ET++I+       +LL++      
Sbjct: 265 GWQPPPSSWKFLQLHVHLKQLDFPGICCFLQSSSDLETLVIDGYEKSRDLLLKYTNKDEQ 324

Query: 199 TGRGKICRAGARFPRLKTVKICGHTGVGILCEPTVELIKLLLENADVLEKIII 41
           T R +       FP LKT+KI   +G        + L+K LL++A VLEK II
Sbjct: 325 TRRFETHDFNCSFPHLKTIKILNFSG------SAMPLVKYLLKHATVLEKFII 371


>ref|XP_009613280.1| PREDICTED: F-box protein At5g03100-like [Nicotiana tomentosiformis]
          Length = 465

 Score = 60.1 bits (144), Expect = 6e-07
 Identities = 41/114 (35%), Positives = 59/114 (51%), Gaps = 4/114 (3%)
 Frame = -1

Query: 370 GWISPPSSWKHFVVNAHLDKLDTLGIVRLLHSSPIVETVIINRTRVGCSVLLRHLCSTG- 194
           GW SPPSS K+  ++  L++LD LGI   L SSP +ET++I+        LL    +   
Sbjct: 313 GWQSPPSSRKYLKLDTALEQLDFLGICSFLQSSPDLETLVIDWYNKKRRDLLSRYTNEDE 372

Query: 193 ---RGKICRAGARFPRLKTVKICGHTGVGILCEPTVELIKLLLENADVLEKIII 41
              R K          LKT+KI  + G     +  + L+K LL+NA +LEK +I
Sbjct: 373 HIKRFKTHNYNCSLLHLKTIKIIDYDGTLSGNKSVLPLVKYLLKNATMLEKFVI 426


>ref|XP_009795792.1| PREDICTED: F-box protein At5g03100-like [Nicotiana sylvestris]
          Length = 482

 Score = 59.7 bits (143), Expect = 7e-07
 Identities = 42/113 (37%), Positives = 54/113 (47%), Gaps = 3/113 (2%)
 Frame = -1

Query: 370 GWISPPSSWKHFVVNAHLDKLDTLGIVRLLHSSPIVETVII---NRTRVGCSVLLRHLCS 200
           GW SPPSS K   +NA L  LD  GI   L SS  +ET++I   N   +   +       
Sbjct: 334 GWRSPPSSCKFLKLNAALKHLDFAGIYSFLQSSSDLETLVIDWNNHNPIDQLLSYTREVE 393

Query: 199 TGRGKICRAGARFPRLKTVKICGHTGVGILCEPTVELIKLLLENADVLEKIII 41
             R            LKT+KI    G  I  +  + L+K LLENA VLEK++I
Sbjct: 394 QSRRFEAHKNCSLLHLKTIKIINFHGKLIGNDLVLRLVKYLLENATVLEKLVI 446


>ref|XP_004244414.1| PREDICTED: F-box/LRR-repeat protein At3g03360 [Solanum
           lycopersicum]
          Length = 451

 Score = 59.7 bits (143), Expect = 7e-07
 Identities = 39/111 (35%), Positives = 60/111 (54%), Gaps = 1/111 (0%)
 Frame = -1

Query: 370 GWISPPSSWKHFVVNAHLDKLDTLGIVRLLHSSPIVETVIINRTRVGCS-VLLRHLCSTG 194
           GW  PPS+WK   +++ LD+L   GI   L +S  +ET++I+  +   S VLL++     
Sbjct: 311 GWQPPPSTWKFLQLSSELDQLTFPGISSFLQNSSDLETLVIDGYKYQSSDVLLKYTNKDE 370

Query: 193 RGKICRAGARFPRLKTVKICGHTGVGILCEPTVELIKLLLENADVLEKIII 41
           + +       FP LKT+KI   +         + L+K LL++A VLEK II
Sbjct: 371 QTRRFETHYSFPYLKTIKILNFS------RSVMPLVKYLLKHATVLEKFII 415


>ref|XP_006358603.1| PREDICTED: probable F-box protein At1g60180-like [Solanum
           tuberosum]
          Length = 302

 Score = 58.2 bits (139), Expect = 2e-06
 Identities = 40/113 (35%), Positives = 59/113 (52%), Gaps = 3/113 (2%)
 Frame = -1

Query: 370 GWISPPSSWKHFVVNAHLDKLDTLGIVRLLHSSPIVETVIINRTRVGCSVLLRHLC---S 200
           GW  PPS+WK   +  +L +LD  GI   L SS  +ET++I+  +    +LL++      
Sbjct: 160 GWQPPPSTWKFLQLRMNLKQLDFPGICCFLQSSSDLETLVIDGYKKPRDLLLKYTNKDEQ 219

Query: 199 TGRGKICRAGARFPRLKTVKICGHTGVGILCEPTVELIKLLLENADVLEKIII 41
           T R +       FP LKT+KI   +         + L+K LL++A VLEK II
Sbjct: 220 TRRFETHDFNCSFPHLKTIKILNFSRF------MMPLVKYLLKHATVLEKFII 266


>ref|XP_009783054.1| PREDICTED: F-box protein At5g03100-like [Nicotiana sylvestris]
          Length = 485

 Score = 57.4 bits (137), Expect = 4e-06
 Identities = 44/116 (37%), Positives = 57/116 (49%), Gaps = 6/116 (5%)
 Frame = -1

Query: 370 GWISPPSSWKHFVVNAHLDKLDTLGIVRLLHSSPIVETVIINRTRVGCSVLLRHLCSTGR 191
           GW  PPSS K   +NA L  LD  GI  LL SS  +ET+II+        + R L  T  
Sbjct: 337 GWQFPPSSCKFLKLNAALKHLDFAGIYSLLQSSSDLETLIIDWK--NHKPIDRLLSYTNE 394

Query: 190 GKICR------AGARFPRLKTVKICGHTGVGILCEPTVELIKLLLENADVLEKIII 41
           G+  R           P LKT+K     G     +  + L+K LL+NA VLEK++I
Sbjct: 395 GEQVRRFETHYVNCSLPHLKTIKFSNFLGSLSGIKFVLLLVKYLLKNATVLEKLVI 450


>ref|XP_009613272.1| PREDICTED: F-box protein At5g03100-like [Nicotiana tomentosiformis]
          Length = 485

 Score = 57.4 bits (137), Expect = 4e-06
 Identities = 41/114 (35%), Positives = 56/114 (49%), Gaps = 4/114 (3%)
 Frame = -1

Query: 370 GWISPPSSWKHFVVNAHLDKLDTLGIVRLLHSSPIVETVII---NRTRVGCSV-LLRHLC 203
           GW SPPSS K   +NA L  LD  GI   L SS  +ET++I   N   +   V     + 
Sbjct: 337 GWHSPPSSCKFLKLNASLKHLDFAGIYSFLQSSSDLETLVIDWNNHKPIDRLVSYTNEVE 396

Query: 202 STGRGKICRAGARFPRLKTVKICGHTGVGILCEPTVELIKLLLENADVLEKIII 41
              R +        P LKT+K     G     +  ++L+K LL+NA VLEK++I
Sbjct: 397 QVRRFETHNVNCSLPHLKTIKFFNFLGSLSGIKFVLQLVKYLLKNATVLEKLVI 450


>ref|XP_009804226.1| PREDICTED: putative F-box/LRR-repeat protein At5g02930 isoform X2
           [Nicotiana sylvestris] gi|698518713|ref|XP_009804227.1|
           PREDICTED: putative F-box/LRR-repeat protein At5g02930
           isoform X2 [Nicotiana sylvestris]
           gi|698518715|ref|XP_009804228.1| PREDICTED: putative
           F-box/LRR-repeat protein At5g02930 isoform X2 [Nicotiana
           sylvestris]
          Length = 468

 Score = 56.2 bits (134), Expect = 8e-06
 Identities = 42/119 (35%), Positives = 57/119 (47%), Gaps = 13/119 (10%)
 Frame = -1

Query: 358 PPSSWKHFVVNAHLDKLDTLGIVRLLHSSPIVETVIINRTRVG-----CSVLLRHLCSTG 194
           P    K+  +  HL KL+  G+  LL +SP VET+ I+   +      C   LR+L    
Sbjct: 308 PELKCKYLTLKLHLKKLNLCGVASLLRASPHVETLNIDVATMSLHDSFCHFKLRYLAKGD 367

Query: 193 RG--KICRAGARFPRLKTVKICGHTGVGIL------CEPTVELIKLLLENADVLEKIII 41
               +I  +   FP LK VKI    GV +       C+   EL K+LL+NA VLEK  I
Sbjct: 368 NVDLRIWTSSFVFPSLKNVKIVNSLGVCLKDHFKPGCDKLFELSKILLKNATVLEKFFI 426


>ref|XP_009804225.1| PREDICTED: putative F-box/LRR-repeat protein At5g02930 isoform X1
           [Nicotiana sylvestris]
          Length = 502

 Score = 56.2 bits (134), Expect = 8e-06
 Identities = 42/119 (35%), Positives = 57/119 (47%), Gaps = 13/119 (10%)
 Frame = -1

Query: 358 PPSSWKHFVVNAHLDKLDTLGIVRLLHSSPIVETVIINRTRVG-----CSVLLRHLCSTG 194
           P    K+  +  HL KL+  G+  LL +SP VET+ I+   +      C   LR+L    
Sbjct: 342 PELKCKYLTLKLHLKKLNLCGVASLLRASPHVETLNIDVATMSLHDSFCHFKLRYLAKGD 401

Query: 193 RG--KICRAGARFPRLKTVKICGHTGVGIL------CEPTVELIKLLLENADVLEKIII 41
               +I  +   FP LK VKI    GV +       C+   EL K+LL+NA VLEK  I
Sbjct: 402 NVDLRIWTSSFVFPSLKNVKIVNSLGVCLKDHFKPGCDKLFELSKILLKNATVLEKFFI 460