BLASTX nr result

ID: Forsythia22_contig00059712 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Forsythia22_contig00059712
         (260 letters)

Database: ./nr 
           69,698,275 sequences; 24,982,196,650 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_007039036.1| F-box family protein, putative [Theobroma ca...    60   8e-07
ref|XP_012474486.1| PREDICTED: F-box/kelch-repeat protein At3g23...    57   4e-06

>ref|XP_007039036.1| F-box family protein, putative [Theobroma cacao]
           gi|508776281|gb|EOY23537.1| F-box family protein,
           putative [Theobroma cacao]
          Length = 400

 Score = 59.7 bits (143), Expect = 8e-07
 Identities = 29/77 (37%), Positives = 49/77 (63%), Gaps = 1/77 (1%)
 Frame = -2

Query: 238 VSVGFWYDGAKSDYKLIRIMHFEKLDFSGCVKEQYHVEVYSLNAGYWRKIDDA-KLPGIC 62
           V +GF +D   +DYKL+RI+ F++ D S  ++    VEVYS   G W++I+++     +C
Sbjct: 161 VFLGFGFDSFNNDYKLVRIVSFKRNDASPFLR----VEVYSWREGVWKEIEESFDSTLLC 216

Query: 61  STEQAIFVDGTLNWMAV 11
              + + VDG+LNW+A+
Sbjct: 217 GVPEGVVVDGSLNWLAI 233


>ref|XP_012474486.1| PREDICTED: F-box/kelch-repeat protein At3g23880-like [Gossypium
           raimondii] gi|763756451|gb|KJB23782.1| hypothetical
           protein B456_004G114700 [Gossypium raimondii]
          Length = 388

 Score = 57.4 bits (137), Expect = 4e-06
 Identities = 29/74 (39%), Positives = 45/74 (60%), Gaps = 1/74 (1%)
 Frame = -2

Query: 229 GFWYDGAKSDYKLIRIMHFEKLDFSGCVKEQYHVEVYSLNAGYWRKIDDA-KLPGICSTE 53
           GF +D   +DYKL+RI+ F   D S  ++    VEVYSL    W++I++  +L  +C  +
Sbjct: 166 GFGFDSFNNDYKLVRIVSFRGNDASPFLR----VEVYSLREAVWKEIEERFELALLCGGQ 221

Query: 52  QAIFVDGTLNWMAV 11
             + VDG+LNW A+
Sbjct: 222 DGVVVDGSLNWAAI 235


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