BLASTX nr result
ID: Forsythia22_contig00057510
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Forsythia22_contig00057510
(242 letters)
Database: ./nr
69,698,275 sequences; 24,982,196,650 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|AEK94334.2| RNA polymerase beta subunit (chloroplast) [Spirod... 154 2e-35
ref|YP_004769939.1| RNA polymerase beta subunit (chloroplast) [W... 154 2e-35
ref|YP_004769804.1| RNA polymerase beta subunit (chloroplast) [W... 154 2e-35
gb|AIJ03298.1| RNA polymerase beta subunit, partial (chloroplast... 152 6e-35
gb|ACC93301.1| RNA polymerase beta subunit, partial (chloroplast... 152 6e-35
gb|AIJ03304.1| RNA polymerase beta subunit, partial (chloroplast... 152 8e-35
gb|AIJ03300.1| RNA polymerase beta subunit, partial (chloroplast... 152 8e-35
dbj|BAC77575.1| RNA polymerase beta subunit [Nicotiana tomentosi... 152 1e-34
dbj|BAC77552.1| RNA polymerase beta subunit [Nicotiana sylvestris] 152 1e-34
ref|YP_004769622.1| RNA polymerase beta subunit (chloroplast) [S... 152 1e-34
ref|YP_001595500.1| RNA polymerase beta subunit [Lemna minor] gi... 152 1e-34
gb|AHE41617.1| RNA polymerase beta subunit protein (chloroplast)... 150 3e-34
ref|YP_005296092.1| rpoB gene product (chloroplast) [Pentactina ... 150 3e-34
ref|YP_004842231.1| RNA polymerase beta subunit [Pyrus pyrifolia... 150 3e-34
gb|ADH94335.1| RNA polymerase beta subunit [Syzygium cumini] 150 3e-34
gb|ADG85311.1| RNA polymerase beta subunit [Silene vulgaris] 150 3e-34
ref|YP_009127111.1| RNA polymerase beta subunit (chloroplast) [A... 150 4e-34
gb|AIJ03302.1| RNA polymerase beta subunit, partial (chloroplast... 149 5e-34
gb|AIJ03299.1| RNA polymerase beta subunit, partial (chloroplast... 149 5e-34
gb|AFB70747.1| DNA-directed RNA polymerase subunit beta, partial... 149 5e-34
>gb|AEK94334.2| RNA polymerase beta subunit (chloroplast) [Spirodela polyrhiza]
Length = 1072
Score = 154 bits (389), Expect = 2e-35
Identities = 77/80 (96%), Positives = 79/80 (98%)
Frame = -3
Query: 240 GRLELEIDRKAGIWARVSRKQKISILVLLSAMGLNLREILDNVCYPEIFLSFLNDKERQK 61
GRLELEIDRKA IWARVSRKQKISILVLLSAMGLNLREILDNVCYPEIFLSFLNDKE++K
Sbjct: 156 GRLELEIDRKARIWARVSRKQKISILVLLSAMGLNLREILDNVCYPEIFLSFLNDKEKKK 215
Query: 60 IGSKENAILEFYQQFACVGG 1
IGSKENAILEFYQQFACVGG
Sbjct: 216 IGSKENAILEFYQQFACVGG 235
>ref|YP_004769939.1| RNA polymerase beta subunit (chloroplast) [Wolffia australiana]
gi|341834231|gb|AEK94500.1| RNA polymerase beta subunit
[Wolffia australiana]
Length = 1072
Score = 154 bits (389), Expect = 2e-35
Identities = 77/80 (96%), Positives = 79/80 (98%)
Frame = -3
Query: 240 GRLELEIDRKAGIWARVSRKQKISILVLLSAMGLNLREILDNVCYPEIFLSFLNDKERQK 61
GRLELEIDRKA IWARVSRKQKISILVLLSAMGLNLREILDNVCYPEIFLSFLNDKE++K
Sbjct: 156 GRLELEIDRKARIWARVSRKQKISILVLLSAMGLNLREILDNVCYPEIFLSFLNDKEKKK 215
Query: 60 IGSKENAILEFYQQFACVGG 1
IGSKENAILEFYQQFACVGG
Sbjct: 216 IGSKENAILEFYQQFACVGG 235
>ref|YP_004769804.1| RNA polymerase beta subunit (chloroplast) [Wolffiella lingulata]
gi|341834147|gb|AEK94417.1| RNA polymerase beta subunit
[Wolffiella lingulata]
Length = 1072
Score = 154 bits (389), Expect = 2e-35
Identities = 77/80 (96%), Positives = 79/80 (98%)
Frame = -3
Query: 240 GRLELEIDRKAGIWARVSRKQKISILVLLSAMGLNLREILDNVCYPEIFLSFLNDKERQK 61
GRLELEIDRKA IWARVSRKQKISILVLLSAMGLNLREILDNVCYPEIFLSFLNDKE++K
Sbjct: 156 GRLELEIDRKARIWARVSRKQKISILVLLSAMGLNLREILDNVCYPEIFLSFLNDKEKKK 215
Query: 60 IGSKENAILEFYQQFACVGG 1
IGSKENAILEFYQQFACVGG
Sbjct: 216 IGSKENAILEFYQQFACVGG 235
>gb|AIJ03298.1| RNA polymerase beta subunit, partial (chloroplast) [Calycera
crassifolia]
Length = 1026
Score = 152 bits (385), Expect = 6e-35
Identities = 76/80 (95%), Positives = 79/80 (98%)
Frame = -3
Query: 240 GRLELEIDRKAGIWARVSRKQKISILVLLSAMGLNLREILDNVCYPEIFLSFLNDKERQK 61
GRLELEIDRKA IWARVSRKQKISILVLLSAMGLNLREIL+NVCYPEIFLSFLNDKE++K
Sbjct: 112 GRLELEIDRKARIWARVSRKQKISILVLLSAMGLNLREILENVCYPEIFLSFLNDKEKKK 171
Query: 60 IGSKENAILEFYQQFACVGG 1
IGSKENAILEFYQQFACVGG
Sbjct: 172 IGSKENAILEFYQQFACVGG 191
>gb|ACC93301.1| RNA polymerase beta subunit, partial (chloroplast) [Acicarpha
spathulata]
Length = 1026
Score = 152 bits (385), Expect = 6e-35
Identities = 76/80 (95%), Positives = 79/80 (98%)
Frame = -3
Query: 240 GRLELEIDRKAGIWARVSRKQKISILVLLSAMGLNLREILDNVCYPEIFLSFLNDKERQK 61
GRLELEIDRKA IWARVSRKQKISILVLLSAMGLNLREIL+NVCYPEIFLSFLNDKE++K
Sbjct: 112 GRLELEIDRKARIWARVSRKQKISILVLLSAMGLNLREILENVCYPEIFLSFLNDKEKKK 171
Query: 60 IGSKENAILEFYQQFACVGG 1
IGSKENAILEFYQQFACVGG
Sbjct: 172 IGSKENAILEFYQQFACVGG 191
>gb|AIJ03304.1| RNA polymerase beta subunit, partial (chloroplast) [Nastanthus
caespitosus]
Length = 1026
Score = 152 bits (384), Expect = 8e-35
Identities = 75/80 (93%), Positives = 79/80 (98%)
Frame = -3
Query: 240 GRLELEIDRKAGIWARVSRKQKISILVLLSAMGLNLREILDNVCYPEIFLSFLNDKERQK 61
GRLELEIDRKA IWARVSRKQKIS+LVLLSAMGLNLREIL+NVCYPEIFLSFLNDKE++K
Sbjct: 112 GRLELEIDRKARIWARVSRKQKISVLVLLSAMGLNLREILENVCYPEIFLSFLNDKEKKK 171
Query: 60 IGSKENAILEFYQQFACVGG 1
IGSKENAILEFYQQFACVGG
Sbjct: 172 IGSKENAILEFYQQFACVGG 191
>gb|AIJ03300.1| RNA polymerase beta subunit, partial (chloroplast) [Gamocarpha
alpina]
Length = 1026
Score = 152 bits (384), Expect = 8e-35
Identities = 75/80 (93%), Positives = 79/80 (98%)
Frame = -3
Query: 240 GRLELEIDRKAGIWARVSRKQKISILVLLSAMGLNLREILDNVCYPEIFLSFLNDKERQK 61
GRLELEIDRKA IWARVSRKQKIS+LVLLSAMGLNLREIL+NVCYPEIFLSFLNDKE++K
Sbjct: 112 GRLELEIDRKARIWARVSRKQKISVLVLLSAMGLNLREILENVCYPEIFLSFLNDKEKKK 171
Query: 60 IGSKENAILEFYQQFACVGG 1
IGSKENAILEFYQQFACVGG
Sbjct: 172 IGSKENAILEFYQQFACVGG 191
>dbj|BAC77575.1| RNA polymerase beta subunit [Nicotiana tomentosiformis]
Length = 128
Score = 152 bits (383), Expect = 1e-34
Identities = 76/80 (95%), Positives = 79/80 (98%)
Frame = -3
Query: 240 GRLELEIDRKAGIWARVSRKQKISILVLLSAMGLNLREILDNVCYPEIFLSFLNDKERQK 61
GRLELEIDRKA IWARVSRKQKISILVLLSAMGLNLREIL+NVCYPEIFLSFL+DKER+K
Sbjct: 46 GRLELEIDRKARIWARVSRKQKISILVLLSAMGLNLREILENVCYPEIFLSFLSDKERKK 105
Query: 60 IGSKENAILEFYQQFACVGG 1
IGSKENAILEFYQQFACVGG
Sbjct: 106 IGSKENAILEFYQQFACVGG 125
>dbj|BAC77552.1| RNA polymerase beta subunit [Nicotiana sylvestris]
Length = 248
Score = 152 bits (383), Expect = 1e-34
Identities = 76/80 (95%), Positives = 79/80 (98%)
Frame = -3
Query: 240 GRLELEIDRKAGIWARVSRKQKISILVLLSAMGLNLREILDNVCYPEIFLSFLNDKERQK 61
GRLELEIDRKA IWARVSRKQKISILVLLSAMGLNLREIL+NVCYPEIFLSFL+DKER+K
Sbjct: 142 GRLELEIDRKARIWARVSRKQKISILVLLSAMGLNLREILENVCYPEIFLSFLSDKERKK 201
Query: 60 IGSKENAILEFYQQFACVGG 1
IGSKENAILEFYQQFACVGG
Sbjct: 202 IGSKENAILEFYQQFACVGG 221
>ref|YP_004769622.1| RNA polymerase beta subunit (chloroplast) [Spirodela polyrhiza]
Length = 1072
Score = 152 bits (383), Expect = 1e-34
Identities = 76/80 (95%), Positives = 78/80 (97%)
Frame = -3
Query: 240 GRLELEIDRKAGIWARVSRKQKISILVLLSAMGLNLREILDNVCYPEIFLSFLNDKERQK 61
GR ELEIDRKA IWARVSRKQKISILVLLSAMGLNLREILDNVCYPEIFLSFLNDKE++K
Sbjct: 156 GRSELEIDRKARIWARVSRKQKISILVLLSAMGLNLREILDNVCYPEIFLSFLNDKEKKK 215
Query: 60 IGSKENAILEFYQQFACVGG 1
IGSKENAILEFYQQFACVGG
Sbjct: 216 IGSKENAILEFYQQFACVGG 235
>ref|YP_001595500.1| RNA polymerase beta subunit [Lemna minor]
gi|182676567|sp|A9L988.1|RPOB_LEMMI RecName:
Full=DNA-directed RNA polymerase subunit beta; AltName:
Full=PEP; AltName: Full=Plastid-encoded RNA polymerase
subunit beta; Short=RNA polymerase subunit beta
(chloroplast) [Lemna minor] gi|88696762|gb|ABD48487.1|
RNA polymerase beta subunit [Lemna minor]
Length = 1072
Score = 152 bits (383), Expect = 1e-34
Identities = 76/80 (95%), Positives = 78/80 (97%)
Frame = -3
Query: 240 GRLELEIDRKAGIWARVSRKQKISILVLLSAMGLNLREILDNVCYPEIFLSFLNDKERQK 61
GR ELEIDRKA IWARVSRKQKISILVLLSAMGLNLREILDNVCYPEIFLSFLNDKE++K
Sbjct: 156 GRSELEIDRKARIWARVSRKQKISILVLLSAMGLNLREILDNVCYPEIFLSFLNDKEKKK 215
Query: 60 IGSKENAILEFYQQFACVGG 1
IGSKENAILEFYQQFACVGG
Sbjct: 216 IGSKENAILEFYQQFACVGG 235
>gb|AHE41617.1| RNA polymerase beta subunit protein (chloroplast) [Hamamelis
mollis]
Length = 1070
Score = 150 bits (379), Expect = 3e-34
Identities = 75/80 (93%), Positives = 78/80 (97%)
Frame = -3
Query: 240 GRLELEIDRKAGIWARVSRKQKISILVLLSAMGLNLREILDNVCYPEIFLSFLNDKERQK 61
GRLELEIDRKA IWARVSRKQKISILVL SAMGLNLREIL+NVCYPEIFLSFLNDKE++K
Sbjct: 156 GRLELEIDRKARIWARVSRKQKISILVLSSAMGLNLREILENVCYPEIFLSFLNDKEKKK 215
Query: 60 IGSKENAILEFYQQFACVGG 1
IGSKENAILEFYQQFACVGG
Sbjct: 216 IGSKENAILEFYQQFACVGG 235
>ref|YP_005296092.1| rpoB gene product (chloroplast) [Pentactina rupicola]
gi|371532615|gb|AEX31725.1| RNA polymerase beta subunit
(chloroplast) [Pentactina rupicola]
Length = 1070
Score = 150 bits (379), Expect = 3e-34
Identities = 75/80 (93%), Positives = 78/80 (97%)
Frame = -3
Query: 240 GRLELEIDRKAGIWARVSRKQKISILVLLSAMGLNLREILDNVCYPEIFLSFLNDKERQK 61
GRLELEIDRKA IWARVSRKQKISILVLLSAMG NLREIL+NVCYPEIFLSFLNDKE++K
Sbjct: 156 GRLELEIDRKAKIWARVSRKQKISILVLLSAMGSNLREILENVCYPEIFLSFLNDKEKKK 215
Query: 60 IGSKENAILEFYQQFACVGG 1
IGSKENAILEFYQQFACVGG
Sbjct: 216 IGSKENAILEFYQQFACVGG 235
>ref|YP_004842231.1| RNA polymerase beta subunit [Pyrus pyrifolia]
gi|568246723|ref|YP_008965485.1| RNA polymerase beta
subunit [Pyrus spinosa] gi|345433553|dbj|BAK69375.1| RNA
polymerase beta subunit [Pyrus pyrifolia]
gi|565666457|emb|CDI73557.1| RNA polymerase beta subunit
[Pyrus spinosa]
Length = 1068
Score = 150 bits (379), Expect = 3e-34
Identities = 75/80 (93%), Positives = 78/80 (97%)
Frame = -3
Query: 240 GRLELEIDRKAGIWARVSRKQKISILVLLSAMGLNLREILDNVCYPEIFLSFLNDKERQK 61
GRLELEIDRKA IWARVSRKQKISILVLLSAMG NLREIL+NVCYPEIFLSFLNDKE++K
Sbjct: 156 GRLELEIDRKARIWARVSRKQKISILVLLSAMGSNLREILENVCYPEIFLSFLNDKEKKK 215
Query: 60 IGSKENAILEFYQQFACVGG 1
IGSKENAILEFYQQFACVGG
Sbjct: 216 IGSKENAILEFYQQFACVGG 235
>gb|ADH94335.1| RNA polymerase beta subunit [Syzygium cumini]
Length = 1072
Score = 150 bits (379), Expect = 3e-34
Identities = 75/80 (93%), Positives = 78/80 (97%)
Frame = -3
Query: 240 GRLELEIDRKAGIWARVSRKQKISILVLLSAMGLNLREILDNVCYPEIFLSFLNDKERQK 61
GRLELEIDRKA IWARVSRKQKISILVL SAMGLNLREIL+NVCYPEIFLSFLNDKE++K
Sbjct: 156 GRLELEIDRKARIWARVSRKQKISILVLSSAMGLNLREILENVCYPEIFLSFLNDKEKKK 215
Query: 60 IGSKENAILEFYQQFACVGG 1
IGSKENAILEFYQQFACVGG
Sbjct: 216 IGSKENAILEFYQQFACVGG 235
>gb|ADG85311.1| RNA polymerase beta subunit [Silene vulgaris]
Length = 127
Score = 150 bits (379), Expect = 3e-34
Identities = 74/80 (92%), Positives = 78/80 (97%)
Frame = -3
Query: 240 GRLELEIDRKAGIWARVSRKQKISILVLLSAMGLNLREILDNVCYPEIFLSFLNDKERQK 61
GRLELEIDRKA IWARVSRKQKISILVLLSAMGLNL+EILDNVCYPEIFLSFLNDK+++K
Sbjct: 27 GRLELEIDRKARIWARVSRKQKISILVLLSAMGLNLKEILDNVCYPEIFLSFLNDKDKKK 86
Query: 60 IGSKENAILEFYQQFACVGG 1
GSKENAILEFYQQFACVGG
Sbjct: 87 FGSKENAILEFYQQFACVGG 106
>ref|YP_009127111.1| RNA polymerase beta subunit (chloroplast) [Arachis hypogaea]
Length = 1070
Score = 150 bits (378), Expect = 4e-34
Identities = 74/80 (92%), Positives = 78/80 (97%)
Frame = -3
Query: 240 GRLELEIDRKAGIWARVSRKQKISILVLLSAMGLNLREILDNVCYPEIFLSFLNDKERQK 61
GRLELEIDRKA IWARVSRKQKISILVLLSAMGLNL EIL+NVCYPE+FLSFLNDKE++K
Sbjct: 156 GRLELEIDRKAKIWARVSRKQKISILVLLSAMGLNLNEILENVCYPELFLSFLNDKEKKK 215
Query: 60 IGSKENAILEFYQQFACVGG 1
IGSKENAILEFYQQFACVGG
Sbjct: 216 IGSKENAILEFYQQFACVGG 235
>gb|AIJ03302.1| RNA polymerase beta subunit, partial (chloroplast) [Lycoseris
triplinervia]
Length = 1028
Score = 149 bits (377), Expect = 5e-34
Identities = 73/80 (91%), Positives = 78/80 (97%)
Frame = -3
Query: 240 GRLELEIDRKAGIWARVSRKQKISILVLLSAMGLNLREILDNVCYPEIFLSFLNDKERQK 61
GRLELEIDRKA IW RVSRKQK+SILVLLSAMGLN+REIL+NVCYPEIFLSFLNDKE++K
Sbjct: 114 GRLELEIDRKARIWVRVSRKQKLSILVLLSAMGLNIREILENVCYPEIFLSFLNDKEKKK 173
Query: 60 IGSKENAILEFYQQFACVGG 1
IGSKENAILEFYQQFACVGG
Sbjct: 174 IGSKENAILEFYQQFACVGG 193
>gb|AIJ03299.1| RNA polymerase beta subunit, partial (chloroplast) [Famatinanthus
decussatus]
Length = 1028
Score = 149 bits (377), Expect = 5e-34
Identities = 73/80 (91%), Positives = 78/80 (97%)
Frame = -3
Query: 240 GRLELEIDRKAGIWARVSRKQKISILVLLSAMGLNLREILDNVCYPEIFLSFLNDKERQK 61
GRLELEIDRKA IW RVSRKQK+SILVLLSAMGLN+REIL+NVCYPEIFLSFLNDKE++K
Sbjct: 114 GRLELEIDRKARIWVRVSRKQKLSILVLLSAMGLNIREILENVCYPEIFLSFLNDKEKKK 173
Query: 60 IGSKENAILEFYQQFACVGG 1
IGSKENAILEFYQQFACVGG
Sbjct: 174 IGSKENAILEFYQQFACVGG 193
>gb|AFB70747.1| DNA-directed RNA polymerase subunit beta, partial (chloroplast)
[Mollugo verticillata]
Length = 759
Score = 149 bits (377), Expect = 5e-34
Identities = 75/80 (93%), Positives = 77/80 (96%)
Frame = -3
Query: 240 GRLELEIDRKAGIWARVSRKQKISILVLLSAMGLNLREILDNVCYPEIFLSFLNDKERQK 61
GR ELEIDRKA IWARVSRKQKISILVL SAMGLNLREILDNVCYPEIFLSFLNDKE++K
Sbjct: 5 GRSELEIDRKARIWARVSRKQKISILVLSSAMGLNLREILDNVCYPEIFLSFLNDKEKKK 64
Query: 60 IGSKENAILEFYQQFACVGG 1
IGSKENAILEFYQQFACVGG
Sbjct: 65 IGSKENAILEFYQQFACVGG 84