BLASTX nr result

ID: Forsythia22_contig00055430 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Forsythia22_contig00055430
         (604 letters)

Database: ./nr 
           69,698,275 sequences; 24,982,196,650 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_011073774.1| PREDICTED: chromosome transmission fidelity ...    57   5e-06

>ref|XP_011073774.1| PREDICTED: chromosome transmission fidelity protein 18 homolog
           [Sesamum indicum]
          Length = 1017

 Score = 57.4 bits (137), Expect = 5e-06
 Identities = 57/185 (30%), Positives = 77/185 (41%), Gaps = 8/185 (4%)
 Frame = -2

Query: 582 MDIPNPEELEWLESHTAHYE-EDAFEIEAIXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 406
           MDIP+ EELEWLESHT +   +D +E+E                                
Sbjct: 1   MDIPDLEELEWLESHTLNDPLDDNYELEI--EPPSPPSSPETDNPPKRPTLSLPPKPSPF 58

Query: 405 XXXXLINNNAKKRFRSNLPELLLCNADSNEPREIAVGPIENKRSRTEELVREGNRAPLSN 226
                IN  AKKR  S+LP+ +L + D+    +  V     KRSRTEE            
Sbjct: 59  KPKPQINPTAKKRLLSDLPKSILLDVDNIYDLDKNVPYA--KRSRTEE------------ 104

Query: 225 SMSNDERRRRREAQNNGEAEILL--DDQENEIVG-----NENVDPRINDGKDNEGEEWLR 67
               +E R+ + AQ+      L+   D+   + G     N NV    N    ++ EEWLR
Sbjct: 105 ----EEARKEKSAQSKCPDVALMVGGDRSGGVDGPADLLNGNVVSVENTEGSDDDEEWLR 160

Query: 66  YSPPR 52
           YSPPR
Sbjct: 161 YSPPR 165


Top