BLASTX nr result

ID: Forsythia22_contig00054399 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Forsythia22_contig00054399
         (539 letters)

Database: ./nr 
           69,698,275 sequences; 24,982,196,650 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CDP14950.1| unnamed protein product [Coffea canephora]             84   4e-14
ref|XP_009797899.1| PREDICTED: putative pentatricopeptide repeat...    69   2e-09
ref|XP_009620715.1| PREDICTED: putative pentatricopeptide repeat...    64   4e-08

>emb|CDP14950.1| unnamed protein product [Coffea canephora]
          Length = 849

 Score = 84.0 bits (206), Expect = 4e-14
 Identities = 38/71 (53%), Positives = 54/71 (76%)
 Frame = -1

Query: 215 KPVSRFIFSHSYSHFPLPEILINEITLAFNQENLKLIDSGNLTKLRPCHVGTILHNLRST 36
           K +SRFIF+HS+S+  LP+ LI+ IT AF+QEN KLID    +K++ CH+ +++H  RS 
Sbjct: 13  KSISRFIFAHSFSNSSLPKSLISRITTAFHQENPKLIDPVVSSKIQSCHLESVIHEFRSK 72

Query: 35  PVSAIKFFQWS 3
           P SAI+FF+WS
Sbjct: 73  PTSAIRFFKWS 83


>ref|XP_009797899.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g31840 [Nicotiana sylvestris]
          Length = 868

 Score = 68.6 bits (166), Expect = 2e-09
 Identities = 45/103 (43%), Positives = 64/103 (62%), Gaps = 7/103 (6%)
 Frame = -1

Query: 290 GKN-SNHKFKKLRPMLISCLKVQS-----LLKPVSRFIFSHSYSHFPLPEILINEITLAF 129
           GKN S++K++K   +L S + + S     LLKP+S   F  +YS       LIN+IT AF
Sbjct: 8   GKNLSSNKWQKFNSLL-SLMAISSKVPPFLLKPISSLYFYRTYSQ---SNPLINQITSAF 63

Query: 128 NQE-NLKLIDSGNLTKLRPCHVGTILHNLRSTPVSAIKFFQWS 3
           +Q+ N +L +   L+ L+P HV  IL+NL S P SAI+FF+WS
Sbjct: 64  HQDDNFQLPEPRTLSNLQPTHVEPILYNLSSKPFSAIRFFEWS 106


>ref|XP_009620715.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g31840 [Nicotiana tomentosiformis]
          Length = 832

 Score = 63.9 bits (154), Expect = 4e-08
 Identities = 36/74 (48%), Positives = 49/74 (66%), Gaps = 1/74 (1%)
 Frame = -1

Query: 221 LLKPVSRFIFSHSYSHFPLPEILINEITLAFNQENL-KLIDSGNLTKLRPCHVGTILHNL 45
           LLKP SR  F  +YS       LIN+IT AF+Q+++ +L +   L+ L+P HV  IL+NL
Sbjct: 11  LLKPFSRLYFYRTYSQ---SNPLINQITSAFHQDDIFQLPEPRTLSNLQPTHVEPILYNL 67

Query: 44  RSTPVSAIKFFQWS 3
            S P SAI+FF+WS
Sbjct: 68  SSKPFSAIRFFEWS 81


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