BLASTX nr result
ID: Forsythia22_contig00053298
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Forsythia22_contig00053298
(379 letters)
Database: ./nr
69,698,275 sequences; 24,982,196,650 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_009628083.1| PREDICTED: double-stranded RNA-binding prote... 76 1e-11
ref|XP_010312663.1| PREDICTED: double-stranded RNA-binding prote... 75 2e-11
ref|XP_006446420.1| hypothetical protein CICLE_v10018273mg [Citr... 72 1e-10
gb|AES71593.2| double-stranded RNA-binding motif protein [Medica... 70 4e-10
ref|XP_003592245.1| Double-stranded RNA binding protein [Medicag... 70 4e-10
ref|XP_006364497.1| PREDICTED: uncharacterized protein LOC102590... 70 5e-10
ref|XP_002313634.2| hypothetical protein POPTR_0009s15500g [Popu... 70 7e-10
ref|XP_009788626.1| PREDICTED: double-stranded RNA-binding prote... 69 1e-09
ref|XP_009788625.1| PREDICTED: double-stranded RNA-binding prote... 69 1e-09
ref|XP_009788624.1| PREDICTED: double-stranded RNA-binding prote... 69 1e-09
ref|XP_009788623.1| PREDICTED: double-stranded RNA-binding prote... 69 1e-09
ref|XP_007015564.1| Ribonuclease 3, putative [Theobroma cacao] g... 69 2e-09
ref|XP_011004447.1| PREDICTED: double-stranded RNA-binding prote... 67 6e-09
gb|KDO66307.1| hypothetical protein CISIN_1g0387612mg, partial [... 67 6e-09
ref|XP_012838483.1| PREDICTED: double-stranded RNA-binding prote... 66 8e-09
gb|EYU36000.1| hypothetical protein MIMGU_mgv1a026812mg [Erythra... 66 8e-09
gb|KEH35125.1| double-stranded RNA-binding motif protein [Medica... 65 1e-08
ref|XP_008231220.1| PREDICTED: double-stranded RNA-binding prote... 64 3e-08
ref|XP_010651622.1| PREDICTED: double-stranded RNA-binding prote... 64 4e-08
ref|XP_011461791.1| PREDICTED: double-stranded RNA-binding prote... 64 5e-08
>ref|XP_009628083.1| PREDICTED: double-stranded RNA-binding protein 1-like [Nicotiana
tomentosiformis]
Length = 227
Score = 75.9 bits (185), Expect = 1e-11
Identities = 39/74 (52%), Positives = 52/74 (70%)
Frame = -2
Query: 228 KLTGSQSSSATPNISILSAADSHAKRTTEMRSYLLGDRVKVYTYIPDIVLPTDTVVLPIG 49
K T S S++ + S +S A+S A +T E +SYLL +RV+VY IPD V P TV LPIG
Sbjct: 152 KETISSSATTPTHSSTVSNANSSAGKTAETKSYLLCNRVRVYKSIPDEVFPKGTVALPIG 211
Query: 48 QDKWVMVRLEFPNK 7
+DKWV+V LEFP++
Sbjct: 212 EDKWVVVNLEFPSE 225
>ref|XP_010312663.1| PREDICTED: double-stranded RNA-binding protein 1-like [Solanum
lycopersicum]
Length = 449
Score = 74.7 bits (182), Expect = 2e-11
Identities = 39/65 (60%), Positives = 47/65 (72%), Gaps = 1/65 (1%)
Frame = -2
Query: 207 SSATPNIS-ILSAADSHAKRTTEMRSYLLGDRVKVYTYIPDIVLPTDTVVLPIGQDKWVM 31
S TP+ S +S ADS A+RT E SYLL +R++VY IPD VLPT T VLPI +DKW +
Sbjct: 379 SKTTPSKSPTVSNADSSARRTAETESYLLSNRIRVYKSIPDGVLPTGTTVLPIAEDKWSV 438
Query: 30 VRLEF 16
VRLEF
Sbjct: 439 VRLEF 443
>ref|XP_006446420.1| hypothetical protein CICLE_v10018273mg [Citrus clementina]
gi|557549031|gb|ESR59660.1| hypothetical protein
CICLE_v10018273mg [Citrus clementina]
Length = 364
Score = 72.0 bits (175), Expect = 1e-10
Identities = 42/83 (50%), Positives = 52/83 (62%), Gaps = 2/83 (2%)
Frame = -2
Query: 243 VPVTDKLTGSQSSSATP-NISILSAADSHA-KRTTEMRSYLLGDRVKVYTYIPDIVLPTD 70
VP + K S S T ++S LS +DS A KR T SYLL +RV+VYT IPDI P
Sbjct: 281 VPPSPKRCLSSSLPMTELDVSALSISDSMAAKRATVTSSYLLCNRVRVYTRIPDIAFPKG 340
Query: 69 TVVLPIGQDKWVMVRLEFPNKNG 1
++PI +DKWV V LEFPN+ G
Sbjct: 341 ITLMPISEDKWVAVSLEFPNEEG 363
>gb|AES71593.2| double-stranded RNA-binding motif protein [Medicago truncatula]
Length = 414
Score = 70.5 bits (171), Expect = 4e-10
Identities = 47/127 (37%), Positives = 61/127 (48%), Gaps = 11/127 (8%)
Frame = -2
Query: 357 IFKGSMNLAGENK---ETEYPSDCTSGNDDFGTHESIALPIVPVTDKLTGSQSSSATPNI 187
+ K L E+K + + P+D NDD T +LPI P + +S+ P
Sbjct: 284 VVKHKQILNSEDKRLDQEKLPTDDVKVNDDMHTE---SLPIPPNKKMKMSNMRTSSLPKS 340
Query: 186 SILS--------AADSHAKRTTEMRSYLLGDRVKVYTYIPDIVLPTDTVVLPIGQDKWVM 31
S LS +DS+ T +YLL DR VYT PDI+ P D VLP +DKWV
Sbjct: 341 SPLSHTELASSTISDSNMTMTCNTSNYLLCDRFNVYTNFPDILFPEDITVLPFDEDKWVA 400
Query: 30 VRLEFPN 10
LEFPN
Sbjct: 401 ACLEFPN 407
>ref|XP_003592245.1| Double-stranded RNA binding protein [Medicago truncatula]
gi|357462121|ref|XP_003601342.1| Double-stranded RNA
binding protein [Medicago truncatula]
Length = 424
Score = 70.5 bits (171), Expect = 4e-10
Identities = 47/127 (37%), Positives = 61/127 (48%), Gaps = 11/127 (8%)
Frame = -2
Query: 357 IFKGSMNLAGENK---ETEYPSDCTSGNDDFGTHESIALPIVPVTDKLTGSQSSSATPNI 187
+ K L E+K + + P+D NDD T +LPI P + +S+ P
Sbjct: 294 VVKHKQILNSEDKRLDQEKLPTDDVKVNDDMHTE---SLPIPPNKKMKMSNMRTSSLPKS 350
Query: 186 SILS--------AADSHAKRTTEMRSYLLGDRVKVYTYIPDIVLPTDTVVLPIGQDKWVM 31
S LS +DS+ T +YLL DR VYT PDI+ P D VLP +DKWV
Sbjct: 351 SPLSHTELASSTISDSNMTMTCNTSNYLLCDRFNVYTNFPDILFPEDITVLPFDEDKWVA 410
Query: 30 VRLEFPN 10
LEFPN
Sbjct: 411 ACLEFPN 417
>ref|XP_006364497.1| PREDICTED: uncharacterized protein LOC102590741 [Solanum tuberosum]
Length = 186
Score = 70.1 bits (170), Expect = 5e-10
Identities = 33/55 (60%), Positives = 42/55 (76%)
Frame = -2
Query: 171 ADSHAKRTTEMRSYLLGDRVKVYTYIPDIVLPTDTVVLPIGQDKWVMVRLEFPNK 7
A+S A+RT E +SYLL +R +VY IPD VLPT T+VLPI +DKW +V LEF N+
Sbjct: 129 ANSSARRTAETKSYLLSNRFRVYKSIPDGVLPTGTIVLPIAEDKWAVVSLEFLNE 183
>ref|XP_002313634.2| hypothetical protein POPTR_0009s15500g [Populus trichocarpa]
gi|550331796|gb|EEE87589.2| hypothetical protein
POPTR_0009s15500g [Populus trichocarpa]
Length = 484
Score = 69.7 bits (169), Expect = 7e-10
Identities = 47/122 (38%), Positives = 62/122 (50%), Gaps = 21/122 (17%)
Frame = -2
Query: 303 SDCTSGNDDFGTHESIALP------IVPV--------------TDKLTGSQSSSATPNIS 184
+D SGN + G +SI P IV V T GS SS+ T N S
Sbjct: 362 ADPKSGNAEVGPEDSILSPSPEKPAIVEVIGNQESSSCSEYVPTSSPEGSSSSTWTHNSS 421
Query: 183 IL-SAADSHAKRTTEMRSYLLGDRVKVYTYIPDIVLPTDTVVLPIGQDKWVMVRLEFPNK 7
+ +DS+ ++ T RSYLL +RV+VY PDI LP V+PI ++WV V LEFP +
Sbjct: 422 SAPTISDSNVRKATRQRSYLLCNRVRVYPCYPDIALPNGITVMPISDNQWVAVSLEFPME 481
Query: 6 NG 1
G
Sbjct: 482 QG 483
>ref|XP_009788626.1| PREDICTED: double-stranded RNA-binding protein 1-like isoform X4
[Nicotiana sylvestris]
Length = 495
Score = 68.9 bits (167), Expect = 1e-09
Identities = 35/68 (51%), Positives = 48/68 (70%)
Frame = -2
Query: 210 SSSATPNISILSAADSHAKRTTEMRSYLLGDRVKVYTYIPDIVLPTDTVVLPIGQDKWVM 31
S++ P S + A+S A++T E + YLL +RV+VY IPD V P T+VLPIG+DKWV+
Sbjct: 427 SAAMAPTHSSTANANSSARKTAETKRYLLCNRVRVYKSIPDEV-PKGTIVLPIGEDKWVV 485
Query: 30 VRLEFPNK 7
V LE PN+
Sbjct: 486 VNLEIPNE 493
>ref|XP_009788625.1| PREDICTED: double-stranded RNA-binding protein 1-like isoform X3
[Nicotiana sylvestris]
Length = 528
Score = 68.9 bits (167), Expect = 1e-09
Identities = 35/68 (51%), Positives = 48/68 (70%)
Frame = -2
Query: 210 SSSATPNISILSAADSHAKRTTEMRSYLLGDRVKVYTYIPDIVLPTDTVVLPIGQDKWVM 31
S++ P S + A+S A++T E + YLL +RV+VY IPD V P T+VLPIG+DKWV+
Sbjct: 460 SAAMAPTHSSTANANSSARKTAETKRYLLCNRVRVYKSIPDEV-PKGTIVLPIGEDKWVV 518
Query: 30 VRLEFPNK 7
V LE PN+
Sbjct: 519 VNLEIPNE 526
>ref|XP_009788624.1| PREDICTED: double-stranded RNA-binding protein 1-like isoform X2
[Nicotiana sylvestris]
Length = 528
Score = 68.9 bits (167), Expect = 1e-09
Identities = 35/68 (51%), Positives = 48/68 (70%)
Frame = -2
Query: 210 SSSATPNISILSAADSHAKRTTEMRSYLLGDRVKVYTYIPDIVLPTDTVVLPIGQDKWVM 31
S++ P S + A+S A++T E + YLL +RV+VY IPD V P T+VLPIG+DKWV+
Sbjct: 460 SAAMAPTHSSTANANSSARKTAETKRYLLCNRVRVYKSIPDEV-PKGTIVLPIGEDKWVV 518
Query: 30 VRLEFPNK 7
V LE PN+
Sbjct: 519 VNLEIPNE 526
>ref|XP_009788623.1| PREDICTED: double-stranded RNA-binding protein 1-like isoform X1
[Nicotiana sylvestris]
Length = 529
Score = 68.9 bits (167), Expect = 1e-09
Identities = 35/68 (51%), Positives = 48/68 (70%)
Frame = -2
Query: 210 SSSATPNISILSAADSHAKRTTEMRSYLLGDRVKVYTYIPDIVLPTDTVVLPIGQDKWVM 31
S++ P S + A+S A++T E + YLL +RV+VY IPD V P T+VLPIG+DKWV+
Sbjct: 461 SAAMAPTHSSTANANSSARKTAETKRYLLCNRVRVYKSIPDEV-PKGTIVLPIGEDKWVV 519
Query: 30 VRLEFPNK 7
V LE PN+
Sbjct: 520 VNLEIPNE 527
>ref|XP_007015564.1| Ribonuclease 3, putative [Theobroma cacao]
gi|508785927|gb|EOY33183.1| Ribonuclease 3, putative
[Theobroma cacao]
Length = 368
Score = 68.6 bits (166), Expect = 2e-09
Identities = 40/99 (40%), Positives = 56/99 (56%)
Frame = -2
Query: 303 SDCTSGNDDFGTHESIALPIVPVTDKLTGSQSSSATPNISILSAADSHAKRTTEMRSYLL 124
S+ T+ +D+ S VPV+ K + ++S +IS LS +DS+ K+ SYLL
Sbjct: 271 SNATTSSDNL----SSCSKSVPVSAKESLLSTTSMHLDISALSISDSNMKKGPGSSSYLL 326
Query: 123 GDRVKVYTYIPDIVLPTDTVVLPIGQDKWVMVRLEFPNK 7
+R +VY PDI P VLPI +D WV V LEFPN+
Sbjct: 327 NNRFRVYRCFPDIAFPKGITVLPISEDSWVAVSLEFPNE 365
>ref|XP_011004447.1| PREDICTED: double-stranded RNA-binding protein 1-like [Populus
euphratica]
Length = 356
Score = 66.6 bits (161), Expect = 6e-09
Identities = 34/78 (43%), Positives = 47/78 (60%)
Frame = -2
Query: 234 TDKLTGSQSSSATPNISILSAADSHAKRTTEMRSYLLGDRVKVYTYIPDIVLPTDTVVLP 55
+ T + +SS+ P IS DS+ ++ T RSYLL +RV+VY PDI LP V+P
Sbjct: 283 SSSFTWTHNSSSAPTIS-----DSNVRKATRPRSYLLCNRVRVYPCYPDIALPNGITVMP 337
Query: 54 IGQDKWVMVRLEFPNKNG 1
I ++WV V LEFP + G
Sbjct: 338 ISDNQWVAVSLEFPMEQG 355
>gb|KDO66307.1| hypothetical protein CISIN_1g0387612mg, partial [Citrus sinensis]
Length = 287
Score = 66.6 bits (161), Expect = 6e-09
Identities = 31/53 (58%), Positives = 37/53 (69%)
Frame = -2
Query: 159 AKRTTEMRSYLLGDRVKVYTYIPDIVLPTDTVVLPIGQDKWVMVRLEFPNKNG 1
AKR T SYLL +RV+VYT IPDI P ++PI +DKWV V LEFPN+ G
Sbjct: 234 AKRATVTSSYLLCNRVRVYTRIPDIAFPKGITLMPISEDKWVAVSLEFPNEEG 286
>ref|XP_012838483.1| PREDICTED: double-stranded RNA-binding protein 1-like [Erythranthe
guttatus]
Length = 418
Score = 66.2 bits (160), Expect = 8e-09
Identities = 29/52 (55%), Positives = 41/52 (78%)
Frame = -2
Query: 156 KRTTEMRSYLLGDRVKVYTYIPDIVLPTDTVVLPIGQDKWVMVRLEFPNKNG 1
K+T E+ SYLL +RVKV+T IP++ LP TVVLPI +++W +V LEFP++ G
Sbjct: 366 KKTNEIESYLLCNRVKVFTSIPNMALPRGTVVLPISENRWTVVNLEFPSEKG 417
>gb|EYU36000.1| hypothetical protein MIMGU_mgv1a026812mg [Erythranthe guttata]
Length = 301
Score = 66.2 bits (160), Expect = 8e-09
Identities = 29/52 (55%), Positives = 41/52 (78%)
Frame = -2
Query: 156 KRTTEMRSYLLGDRVKVYTYIPDIVLPTDTVVLPIGQDKWVMVRLEFPNKNG 1
K+T E+ SYLL +RVKV+T IP++ LP TVVLPI +++W +V LEFP++ G
Sbjct: 249 KKTNEIESYLLCNRVKVFTSIPNMALPRGTVVLPISENRWTVVNLEFPSEKG 300
>gb|KEH35125.1| double-stranded RNA-binding motif protein [Medicago truncatula]
Length = 714
Score = 65.5 bits (158), Expect = 1e-08
Identities = 38/90 (42%), Positives = 47/90 (52%), Gaps = 8/90 (8%)
Frame = -2
Query: 255 ALPIVPVTDKLTGSQSSSATPNISILS--------AADSHAKRTTEMRSYLLGDRVKVYT 100
+ PI P S +SS++P + LS +DS+ T+ SYLL DR KVYT
Sbjct: 621 SFPIPPNKKMKMSSMNSSSSPKSTPLSHTELPSPTISDSNMTMTSNTSSYLLCDRFKVYT 680
Query: 99 YIPDIVLPTDTVVLPIGQDKWVMVRLEFPN 10
PD + D VLPI DKWV LEFPN
Sbjct: 681 SFPDTIFSEDITVLPIDDDKWVAACLEFPN 710
>ref|XP_008231220.1| PREDICTED: double-stranded RNA-binding protein 1-like [Prunus mume]
Length = 150
Score = 64.3 bits (155), Expect = 3e-08
Identities = 39/105 (37%), Positives = 55/105 (52%)
Frame = -2
Query: 321 KETEYPSDCTSGNDDFGTHESIALPIVPVTDKLTGSQSSSATPNISILSAADSHAKRTTE 142
KET PS C+ ++P T++ + S + PN+ A ++ + T
Sbjct: 61 KETGNPSSCSES-------------MLPSTEE-SPSSPAFIQPNLP----AVTNVGKGTG 102
Query: 141 MRSYLLGDRVKVYTYIPDIVLPTDTVVLPIGQDKWVMVRLEFPNK 7
+RSYLL +RV+VYT PDI P VLP+ DKWV LEFPN+
Sbjct: 103 VRSYLLCNRVRVYTQFPDIAFPNSITVLPVSDDKWVAFSLEFPNE 147
>ref|XP_010651622.1| PREDICTED: double-stranded RNA-binding protein 1-like [Vitis
vinifera]
Length = 552
Score = 63.9 bits (154), Expect = 4e-08
Identities = 38/98 (38%), Positives = 51/98 (52%)
Frame = -2
Query: 294 TSGNDDFGTHESIALPIVPVTDKLTGSQSSSATPNISILSAADSHAKRTTEMRSYLLGDR 115
T GN T S ++P+ P D + P ++ L + S + TT SYLL R
Sbjct: 466 TKGNS---TACSESVPVAPKEDSV---------PMMAPLDLSASSTEMTTSKMSYLLCGR 513
Query: 114 VKVYTYIPDIVLPTDTVVLPIGQDKWVMVRLEFPNKNG 1
V+VY PD+ P VLPI +DKWV + LEFPN+ G
Sbjct: 514 VRVYPCFPDVSFPKGITVLPIREDKWVAMSLEFPNEKG 551
>ref|XP_011461791.1| PREDICTED: double-stranded RNA-binding protein 1-like [Fragaria
vesca subsp. vesca]
Length = 342
Score = 63.5 bits (153), Expect = 5e-08
Identities = 29/62 (46%), Positives = 41/62 (66%)
Frame = -2
Query: 192 NISILSAADSHAKRTTEMRSYLLGDRVKVYTYIPDIVLPTDTVVLPIGQDKWVMVRLEFP 13
++S + +AD + + ++SYLL +R +VYT PDI P +LPI DKWV VRLEFP
Sbjct: 278 DLSAVLSADENEGKIAGLKSYLLCNRFRVYTQFPDIAFPKCITMLPISDDKWVAVRLEFP 337
Query: 12 NK 7
N+
Sbjct: 338 NE 339