BLASTX nr result

ID: Forsythia22_contig00052500 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Forsythia22_contig00052500
         (610 letters)

Database: ./nr 
           69,698,275 sequences; 24,982,196,650 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CCH50976.1| T4.15 [Malus x robusta]                                58   3e-06

>emb|CCH50976.1| T4.15 [Malus x robusta]
          Length = 986

 Score = 58.2 bits (139), Expect = 3e-06
 Identities = 54/180 (30%), Positives = 86/180 (47%), Gaps = 10/180 (5%)
 Frame = +1

Query: 4   VLNVIIKKWKRSTKKN*IQRIRQW-ISMIKFK*FSRMNF*RKKMDMNGNGNLRYGMKCSC 180
           V++V+IK+ ++  K     R R W +   K   F      +   D  G  +  +    SC
Sbjct: 337 VMDVLIKRVRQKNKTWKCPRTRWWNLKEEKQAIFKEKVITQCVWDREGEASQMWDSMASC 396

Query: 181 IGNLSKELLEENMGRSPSNEEHGGGTRESIWKLRLKKKCYRNSQI*KSGGFGEV*IN*IR 360
           I  ++KE+L E+ G +P  +E      E   K++ KK+C +     ++   GE      R
Sbjct: 397 IRKVAKEVLGESKGFAPHQKESWWWNEEVQTKVKAKKECCKALYKDRTDENGER----YR 452

Query: 361 N*KDD---------LGALGKMYEKFCSYLETKDEG*VSI*KLSW*REKRSRDINQVKCIK 513
             K +         L A   MY++    L+TK EG + I KL+  REK++RD+NQV+CIK
Sbjct: 453 KAKQEAKKAVREAKLAAYDDMYKR----LDTK-EGELDIYKLARAREKKTRDLNQVRCIK 507


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