BLASTX nr result
ID: Forsythia22_contig00051172
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Forsythia22_contig00051172
(231 letters)
Database: ./nr
69,698,275 sequences; 24,982,196,650 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|ADO13879.1| RNA polymerase beta subunit, partial (chloroplast... 150 2e-34
ref|YP_009110592.1| RNA polymerase beta'' chain (chloroplast) [H... 149 6e-34
ref|YP_004563994.1| RNA polymerase beta'' chain [Olea woodiana s... 149 6e-34
ref|YP_004940500.1| rpoC2 gene product (chloroplast) [Boea hygro... 148 1e-33
gb|AII18684.1| RNA polymerase beta' subunit, partial (chloroplas... 147 2e-33
gb|AII18681.1| RNA polymerase beta' subunit, partial (chloroplas... 147 2e-33
gb|AII18680.1| RNA polymerase beta' subunit, partial (chloroplas... 147 2e-33
gb|AII18679.1| RNA polymerase beta' subunit, partial (chloroplas... 147 2e-33
gb|AII18676.1| RNA polymerase beta' subunit, partial (chloroplas... 147 2e-33
gb|AII18675.1| RNA polymerase beta' subunit, partial (chloroplas... 147 2e-33
gb|AII18674.1| RNA polymerase beta' subunit, partial (chloroplas... 147 2e-33
gb|AII18673.1| RNA polymerase beta' subunit, partial (chloroplas... 147 2e-33
gb|AII18672.1| RNA polymerase beta' subunit, partial (chloroplas... 147 2e-33
gb|AII18671.1| RNA polymerase beta' subunit, partial (chloroplas... 147 2e-33
gb|AII18670.1| RNA polymerase beta' subunit, partial (chloroplas... 147 2e-33
gb|AII18669.1| RNA polymerase beta' subunit, partial (chloroplas... 147 2e-33
gb|AII18668.1| RNA polymerase beta' subunit, partial (chloroplas... 147 2e-33
gb|AII18667.1| RNA polymerase beta' subunit, partial (chloroplas... 147 2e-33
gb|AII18666.1| RNA polymerase beta' subunit, partial (chloroplas... 147 2e-33
gb|AII18664.1| RNA polymerase beta' subunit, partial (chloroplas... 147 2e-33
>gb|ADO13879.1| RNA polymerase beta subunit, partial (chloroplast) [Tetradoxa
omeiensis]
Length = 970
Score = 150 bits (380), Expect = 2e-34
Identities = 74/76 (97%), Positives = 75/76 (98%)
Frame = +3
Query: 3 VVTYEITDGINLATLFPPDLLQERDNVQLRVVNYILYGNGKPIRGISDTDIQLVRTCLVL 182
VVTYEITDGINLATLFPPDLLQERDNVQLRVVNYILYGNGKPIRGISDT IQLVRTCLVL
Sbjct: 757 VVTYEITDGINLATLFPPDLLQERDNVQLRVVNYILYGNGKPIRGISDTSIQLVRTCLVL 816
Query: 183 NWDQDKKSSSSEEARA 230
NWDQDKKSSS+EEARA
Sbjct: 817 NWDQDKKSSSNEEARA 832
>ref|YP_009110592.1| RNA polymerase beta'' chain (chloroplast) [Hesperelaea palmeri]
gi|725798276|emb|CED79752.1| RNA polymerase beta'' chain
(chloroplast) [Hesperelaea palmeri]
Length = 1394
Score = 149 bits (377), Expect = 6e-34
Identities = 76/77 (98%), Positives = 76/77 (98%), Gaps = 1/77 (1%)
Frame = +3
Query: 3 VVTYEITDGINLATLFPPDLLQERDNVQLRVVNYILYGNGKPIRGISDTDIQLVRTCLVL 182
VVTYEITDGINLATLFPPDLLQERDNVQLRVVNYILYGNGKPIRGISDTDIQLVRTCLVL
Sbjct: 784 VVTYEITDGINLATLFPPDLLQERDNVQLRVVNYILYGNGKPIRGISDTDIQLVRTCLVL 843
Query: 183 NWDQD-KKSSSSEEARA 230
NWDQD KKSSSSEEARA
Sbjct: 844 NWDQDKKKSSSSEEARA 860
>ref|YP_004563994.1| RNA polymerase beta'' chain [Olea woodiana subsp. woodiana]
gi|334084649|emb|CBS29340.1| RNA polymerase beta'' chain
[Olea woodiana subsp. woodiana]
Length = 1394
Score = 149 bits (377), Expect = 6e-34
Identities = 76/77 (98%), Positives = 76/77 (98%), Gaps = 1/77 (1%)
Frame = +3
Query: 3 VVTYEITDGINLATLFPPDLLQERDNVQLRVVNYILYGNGKPIRGISDTDIQLVRTCLVL 182
VVTYEITDGINLATLFPPDLLQERDNVQLRVVNYILYGNGKPIRGISDTDIQLVRTCLVL
Sbjct: 784 VVTYEITDGINLATLFPPDLLQERDNVQLRVVNYILYGNGKPIRGISDTDIQLVRTCLVL 843
Query: 183 NWDQD-KKSSSSEEARA 230
NWDQD KKSSSSEEARA
Sbjct: 844 NWDQDKKKSSSSEEARA 860
>ref|YP_004940500.1| rpoC2 gene product (chloroplast) [Boea hygrometrica]
gi|340549397|gb|AEK53219.1| RNA polymerase beta'' subunit
(chloroplast) [Boea hygrometrica]
Length = 1381
Score = 148 bits (374), Expect = 1e-33
Identities = 73/76 (96%), Positives = 74/76 (97%)
Frame = +3
Query: 3 VVTYEITDGINLATLFPPDLLQERDNVQLRVVNYILYGNGKPIRGISDTDIQLVRTCLVL 182
VVTYEITDGINLATLFPPDLLQERDNVQLRVVNYILYGNGKPIR ISDT+IQ VRTCLVL
Sbjct: 784 VVTYEITDGINLATLFPPDLLQERDNVQLRVVNYILYGNGKPIRAISDTNIQFVRTCLVL 843
Query: 183 NWDQDKKSSSSEEARA 230
NWDQDKKSSSSEEARA
Sbjct: 844 NWDQDKKSSSSEEARA 859
>gb|AII18684.1| RNA polymerase beta' subunit, partial (chloroplast) [Viburnum
triphyllum]
Length = 1384
Score = 147 bits (372), Expect = 2e-33
Identities = 73/76 (96%), Positives = 73/76 (96%)
Frame = +3
Query: 3 VVTYEITDGINLATLFPPDLLQERDNVQLRVVNYILYGNGKPIRGISDTDIQLVRTCLVL 182
VVTYEITDGINLATLFPPDLL ERDNVQLRVVNYILYGNGKPIRGISDT IQLVRTCLVL
Sbjct: 782 VVTYEITDGINLATLFPPDLLHERDNVQLRVVNYILYGNGKPIRGISDTSIQLVRTCLVL 841
Query: 183 NWDQDKKSSSSEEARA 230
NWDQDKKSSS EEARA
Sbjct: 842 NWDQDKKSSSIEEARA 857
>gb|AII18681.1| RNA polymerase beta' subunit, partial (chloroplast) [Viburnum
sieboldii]
Length = 1384
Score = 147 bits (372), Expect = 2e-33
Identities = 73/76 (96%), Positives = 73/76 (96%)
Frame = +3
Query: 3 VVTYEITDGINLATLFPPDLLQERDNVQLRVVNYILYGNGKPIRGISDTDIQLVRTCLVL 182
VVTYEITDGINLATLFPPDLL ERDNVQLRVVNYILYGNGKPIRGISDT IQLVRTCLVL
Sbjct: 782 VVTYEITDGINLATLFPPDLLHERDNVQLRVVNYILYGNGKPIRGISDTSIQLVRTCLVL 841
Query: 183 NWDQDKKSSSSEEARA 230
NWDQDKKSSS EEARA
Sbjct: 842 NWDQDKKSSSIEEARA 857
>gb|AII18680.1| RNA polymerase beta' subunit, partial (chloroplast) [Viburnum
punctatum]
Length = 1413
Score = 147 bits (372), Expect = 2e-33
Identities = 73/76 (96%), Positives = 73/76 (96%)
Frame = +3
Query: 3 VVTYEITDGINLATLFPPDLLQERDNVQLRVVNYILYGNGKPIRGISDTDIQLVRTCLVL 182
VVTYEITDGINLATLFPPDLL ERDNVQLRVVNYILYGNGKPIRGISDT IQLVRTCLVL
Sbjct: 811 VVTYEITDGINLATLFPPDLLHERDNVQLRVVNYILYGNGKPIRGISDTSIQLVRTCLVL 870
Query: 183 NWDQDKKSSSSEEARA 230
NWDQDKKSSS EEARA
Sbjct: 871 NWDQDKKSSSIEEARA 886
>gb|AII18679.1| RNA polymerase beta' subunit, partial (chloroplast) [Viburnum
plicatum]
Length = 1384
Score = 147 bits (372), Expect = 2e-33
Identities = 73/76 (96%), Positives = 73/76 (96%)
Frame = +3
Query: 3 VVTYEITDGINLATLFPPDLLQERDNVQLRVVNYILYGNGKPIRGISDTDIQLVRTCLVL 182
VVTYEITDGINLATLFPPDLL ERDNVQLRVVNYILYGNGKPIRGISDT IQLVRTCLVL
Sbjct: 782 VVTYEITDGINLATLFPPDLLHERDNVQLRVVNYILYGNGKPIRGISDTSIQLVRTCLVL 841
Query: 183 NWDQDKKSSSSEEARA 230
NWDQDKKSSS EEARA
Sbjct: 842 NWDQDKKSSSIEEARA 857
>gb|AII18676.1| RNA polymerase beta' subunit, partial (chloroplast) [Viburnum
lutescens]
Length = 1384
Score = 147 bits (372), Expect = 2e-33
Identities = 73/76 (96%), Positives = 73/76 (96%)
Frame = +3
Query: 3 VVTYEITDGINLATLFPPDLLQERDNVQLRVVNYILYGNGKPIRGISDTDIQLVRTCLVL 182
VVTYEITDGINLATLFPPDLL ERDNVQLRVVNYILYGNGKPIRGISDT IQLVRTCLVL
Sbjct: 782 VVTYEITDGINLATLFPPDLLHERDNVQLRVVNYILYGNGKPIRGISDTSIQLVRTCLVL 841
Query: 183 NWDQDKKSSSSEEARA 230
NWDQDKKSSS EEARA
Sbjct: 842 NWDQDKKSSSIEEARA 857
>gb|AII18675.1| RNA polymerase beta' subunit, partial (chloroplast) [Viburnum
lentago]
Length = 1384
Score = 147 bits (372), Expect = 2e-33
Identities = 73/76 (96%), Positives = 73/76 (96%)
Frame = +3
Query: 3 VVTYEITDGINLATLFPPDLLQERDNVQLRVVNYILYGNGKPIRGISDTDIQLVRTCLVL 182
VVTYEITDGINLATLFPPDLL ERDNVQLRVVNYILYGNGKPIRGISDT IQLVRTCLVL
Sbjct: 782 VVTYEITDGINLATLFPPDLLHERDNVQLRVVNYILYGNGKPIRGISDTSIQLVRTCLVL 841
Query: 183 NWDQDKKSSSSEEARA 230
NWDQDKKSSS EEARA
Sbjct: 842 NWDQDKKSSSIEEARA 857
>gb|AII18674.1| RNA polymerase beta' subunit, partial (chloroplast) [Viburnum
lantanoides]
Length = 1384
Score = 147 bits (372), Expect = 2e-33
Identities = 73/76 (96%), Positives = 73/76 (96%)
Frame = +3
Query: 3 VVTYEITDGINLATLFPPDLLQERDNVQLRVVNYILYGNGKPIRGISDTDIQLVRTCLVL 182
VVTYEITDGINLATLFPPDLL ERDNVQLRVVNYILYGNGKPIRGISDT IQLVRTCLVL
Sbjct: 782 VVTYEITDGINLATLFPPDLLHERDNVQLRVVNYILYGNGKPIRGISDTSIQLVRTCLVL 841
Query: 183 NWDQDKKSSSSEEARA 230
NWDQDKKSSS EEARA
Sbjct: 842 NWDQDKKSSSIEEARA 857
>gb|AII18673.1| RNA polymerase beta' subunit, partial (chloroplast) [Viburnum
grandiflorum]
Length = 1384
Score = 147 bits (372), Expect = 2e-33
Identities = 73/76 (96%), Positives = 73/76 (96%)
Frame = +3
Query: 3 VVTYEITDGINLATLFPPDLLQERDNVQLRVVNYILYGNGKPIRGISDTDIQLVRTCLVL 182
VVTYEITDGINLATLFPPDLL ERDNVQLRVVNYILYGNGKPIRGISDT IQLVRTCLVL
Sbjct: 782 VVTYEITDGINLATLFPPDLLHERDNVQLRVVNYILYGNGKPIRGISDTSIQLVRTCLVL 841
Query: 183 NWDQDKKSSSSEEARA 230
NWDQDKKSSS EEARA
Sbjct: 842 NWDQDKKSSSIEEARA 857
>gb|AII18672.1| RNA polymerase beta' subunit, partial (chloroplast) [Viburnum
erubescens]
Length = 1384
Score = 147 bits (372), Expect = 2e-33
Identities = 73/76 (96%), Positives = 73/76 (96%)
Frame = +3
Query: 3 VVTYEITDGINLATLFPPDLLQERDNVQLRVVNYILYGNGKPIRGISDTDIQLVRTCLVL 182
VVTYEITDGINLATLFPPDLL ERDNVQLRVVNYILYGNGKPIRGISDT IQLVRTCLVL
Sbjct: 782 VVTYEITDGINLATLFPPDLLHERDNVQLRVVNYILYGNGKPIRGISDTSIQLVRTCLVL 841
Query: 183 NWDQDKKSSSSEEARA 230
NWDQDKKSSS EEARA
Sbjct: 842 NWDQDKKSSSIEEARA 857
>gb|AII18671.1| RNA polymerase beta' subunit, partial (chloroplast) [Viburnum
dilatatum]
Length = 1384
Score = 147 bits (372), Expect = 2e-33
Identities = 73/76 (96%), Positives = 73/76 (96%)
Frame = +3
Query: 3 VVTYEITDGINLATLFPPDLLQERDNVQLRVVNYILYGNGKPIRGISDTDIQLVRTCLVL 182
VVTYEITDGINLATLFPPDLL ERDNVQLRVVNYILYGNGKPIRGISDT IQLVRTCLVL
Sbjct: 782 VVTYEITDGINLATLFPPDLLHERDNVQLRVVNYILYGNGKPIRGISDTSIQLVRTCLVL 841
Query: 183 NWDQDKKSSSSEEARA 230
NWDQDKKSSS EEARA
Sbjct: 842 NWDQDKKSSSIEEARA 857
>gb|AII18670.1| RNA polymerase beta' subunit, partial (chloroplast) [Viburnum
dentatum]
Length = 1384
Score = 147 bits (372), Expect = 2e-33
Identities = 73/76 (96%), Positives = 73/76 (96%)
Frame = +3
Query: 3 VVTYEITDGINLATLFPPDLLQERDNVQLRVVNYILYGNGKPIRGISDTDIQLVRTCLVL 182
VVTYEITDGINLATLFPPDLL ERDNVQLRVVNYILYGNGKPIRGISDT IQLVRTCLVL
Sbjct: 782 VVTYEITDGINLATLFPPDLLHERDNVQLRVVNYILYGNGKPIRGISDTSIQLVRTCLVL 841
Query: 183 NWDQDKKSSSSEEARA 230
NWDQDKKSSS EEARA
Sbjct: 842 NWDQDKKSSSIEEARA 857
>gb|AII18669.1| RNA polymerase beta' subunit, partial (chloroplast) [Viburnum
cylindricum]
Length = 1384
Score = 147 bits (372), Expect = 2e-33
Identities = 73/76 (96%), Positives = 73/76 (96%)
Frame = +3
Query: 3 VVTYEITDGINLATLFPPDLLQERDNVQLRVVNYILYGNGKPIRGISDTDIQLVRTCLVL 182
VVTYEITDGINLATLFPPDLL ERDNVQLRVVNYILYGNGKPIRGISDT IQLVRTCLVL
Sbjct: 782 VVTYEITDGINLATLFPPDLLHERDNVQLRVVNYILYGNGKPIRGISDTSIQLVRTCLVL 841
Query: 183 NWDQDKKSSSSEEARA 230
NWDQDKKSSS EEARA
Sbjct: 842 NWDQDKKSSSIEEARA 857
>gb|AII18668.1| RNA polymerase beta' subunit, partial (chloroplast) [Viburnum
clemensae]
Length = 1384
Score = 147 bits (372), Expect = 2e-33
Identities = 73/76 (96%), Positives = 73/76 (96%)
Frame = +3
Query: 3 VVTYEITDGINLATLFPPDLLQERDNVQLRVVNYILYGNGKPIRGISDTDIQLVRTCLVL 182
VVTYEITDGINLATLFPPDLL ERDNVQLRVVNYILYGNGKPIRGISDT IQLVRTCLVL
Sbjct: 782 VVTYEITDGINLATLFPPDLLHERDNVQLRVVNYILYGNGKPIRGISDTSIQLVRTCLVL 841
Query: 183 NWDQDKKSSSSEEARA 230
NWDQDKKSSS EEARA
Sbjct: 842 NWDQDKKSSSIEEARA 857
>gb|AII18667.1| RNA polymerase beta' subunit, partial (chloroplast) [Viburnum
cassinoides]
Length = 1384
Score = 147 bits (372), Expect = 2e-33
Identities = 73/76 (96%), Positives = 73/76 (96%)
Frame = +3
Query: 3 VVTYEITDGINLATLFPPDLLQERDNVQLRVVNYILYGNGKPIRGISDTDIQLVRTCLVL 182
VVTYEITDGINLATLFPPDLL ERDNVQLRVVNYILYGNGKPIRGISDT IQLVRTCLVL
Sbjct: 782 VVTYEITDGINLATLFPPDLLHERDNVQLRVVNYILYGNGKPIRGISDTSIQLVRTCLVL 841
Query: 183 NWDQDKKSSSSEEARA 230
NWDQDKKSSS EEARA
Sbjct: 842 NWDQDKKSSSIEEARA 857
>gb|AII18666.1| RNA polymerase beta' subunit, partial (chloroplast) [Viburnum
carlesii]
Length = 1384
Score = 147 bits (372), Expect = 2e-33
Identities = 73/76 (96%), Positives = 73/76 (96%)
Frame = +3
Query: 3 VVTYEITDGINLATLFPPDLLQERDNVQLRVVNYILYGNGKPIRGISDTDIQLVRTCLVL 182
VVTYEITDGINLATLFPPDLL ERDNVQLRVVNYILYGNGKPIRGISDT IQLVRTCLVL
Sbjct: 782 VVTYEITDGINLATLFPPDLLHERDNVQLRVVNYILYGNGKPIRGISDTSIQLVRTCLVL 841
Query: 183 NWDQDKKSSSSEEARA 230
NWDQDKKSSS EEARA
Sbjct: 842 NWDQDKKSSSIEEARA 857
>gb|AII18664.1| RNA polymerase beta' subunit, partial (chloroplast) [Viburnum
acerifolium]
Length = 1384
Score = 147 bits (372), Expect = 2e-33
Identities = 73/76 (96%), Positives = 73/76 (96%)
Frame = +3
Query: 3 VVTYEITDGINLATLFPPDLLQERDNVQLRVVNYILYGNGKPIRGISDTDIQLVRTCLVL 182
VVTYEITDGINLATLFPPDLL ERDNVQLRVVNYILYGNGKPIRGISDT IQLVRTCLVL
Sbjct: 782 VVTYEITDGINLATLFPPDLLHERDNVQLRVVNYILYGNGKPIRGISDTSIQLVRTCLVL 841
Query: 183 NWDQDKKSSSSEEARA 230
NWDQDKKSSS EEARA
Sbjct: 842 NWDQDKKSSSIEEARA 857