BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Forsythia22_contig00050812
         (403 letters)

Database: ./nr 
           69,698,275 sequences; 24,982,196,650 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AKB94071.1| ORF V protein [Strawberry vein banding virus]          155   1e-35
ref|NP_043933.1| hypothetical protein [Strawberry vein banding v...   155   1e-35
emb|CCG14716.1| ORF V protein [Strawberry vein banding virus]         155   1e-35
gb|ABX80508.1| RdRp [Dahlia mosaic virus]                             151   2e-34
gb|ABX80507.1| RdRp [Dahlia mosaic virus]                             151   2e-34
gb|ABX80505.1| RdRp [Dahlia mosaic virus]                             151   2e-34
gb|AEL30041.1| polymerase polyprotein [Dahlia common mosaic virus]    151   2e-34
gb|ABW81763.1| reverse transcriptase [Dahlia mosaic virus-Holland]    151   2e-34
gb|ABM97613.1| truncated reverse transcriptase [Dahlia mosaic vi...   151   2e-34
gb|ABX80506.1| RdRp [Dahlia mosaic virus]                             150   2e-34
gb|ABX80503.1| RdRp [Carnation etched ring virus]                     150   3e-34
gb|AHA91342.1| reverse transcriptase [Cauliflower mosaic virus] ...   150   4e-34
gb|AHA91338.1| reverse transcriptase [Cauliflower mosaic virus]       150   4e-34
gb|AHA91331.1| reverse transcriptase [Cauliflower mosaic virus]       150   4e-34
gb|AHA91317.1| reverse transcriptase [Cauliflower mosaic virus]       150   4e-34
gb|ABX80502.1| RdRp [Cauliflower mosaic virus]                        150   4e-34
gb|ABX80501.1| RdRp [Cauliflower mosaic virus]                        150   4e-34
gb|AAA21736.1| reverse transcriptase [Cauliflower mosaic virus]       150   4e-34
dbj|BAO53680.1| reverse transcriptase [Cauliflower mosaic virus]      150   4e-34
dbj|BAO53659.1| reverse transcriptase [Cauliflower mosaic virus]      150   4e-34

>gb|AKB94071.1| ORF V protein [Strawberry vein banding virus]
          Length = 704

 Score =  155 bits (392), Expect = 1e-35
 Identities = 80/134 (59%), Positives = 93/134 (69%)
 Frame = -1

Query: 403 VICAKAMAYGPKDRDEFSIQIKELLELGVIEPSKSPFSSPAFMVXXXXXXXXXXXRMVID 224
           VI  K M Y P+DR+EF  QI+ELL+LG+I PSKSP SSPAFMV           RMVI+
Sbjct: 274 VIKCKPMQYSPQDREEFKTQIEELLKLGIIRPSKSPHSSPAFMVRNHAEIKRGKARMVIN 333

Query: 223 YSQLNKITKADGYILPNMQSLLHFIKGKKIFSSFDLKSGFHQVRFKDSTKPLTAFSCLQG 44
           Y +LN  TK DGY+LPN + LL  I GK  +SSFD KSGF QVR    T  LTAFSC QG
Sbjct: 334 YKKLNDNTKGDGYLLPNKEQLLQRIGGKTYYSSFDCKSGFWQVRLAPETIQLTAFSCPQG 393

Query: 43  HFQWTVVPFGLKQA 2
           H++W V+PFGLKQA
Sbjct: 394 HYEWLVMPFGLKQA 407


>ref|NP_043933.1| hypothetical protein [Strawberry vein banding virus]
           gi|1360613|emb|CAA65970.1| ORF V [Strawberry vein
           banding virus]
          Length = 708

 Score =  155 bits (392), Expect = 1e-35
 Identities = 79/134 (58%), Positives = 93/134 (69%)
 Frame = -1

Query: 403 VICAKAMAYGPKDRDEFSIQIKELLELGVIEPSKSPFSSPAFMVXXXXXXXXXXXRMVID 224
           +I  K M Y P+DR+EF  QI+ELL+LG+I PSKSP SSPAFMV           RMVI+
Sbjct: 278 IIKCKPMQYSPQDREEFKTQIEELLKLGIIRPSKSPHSSPAFMVRNHAEIKRGKARMVIN 337

Query: 223 YSQLNKITKADGYILPNMQSLLHFIKGKKIFSSFDLKSGFHQVRFKDSTKPLTAFSCLQG 44
           Y +LN  TK DGY+LPN + LL  I GK  +SSFD KSGF QVR    T  LTAFSC QG
Sbjct: 338 YKKLNDHTKGDGYLLPNKEQLLQRIGGKTFYSSFDCKSGFWQVRLAPETIQLTAFSCPQG 397

Query: 43  HFQWTVVPFGLKQA 2
           H++W V+PFGLKQA
Sbjct: 398 HYEWLVMPFGLKQA 411


>emb|CCG14716.1| ORF V protein [Strawberry vein banding virus]
          Length = 699

 Score =  155 bits (392), Expect = 1e-35
 Identities = 80/134 (59%), Positives = 93/134 (69%)
 Frame = -1

Query: 403 VICAKAMAYGPKDRDEFSIQIKELLELGVIEPSKSPFSSPAFMVXXXXXXXXXXXRMVID 224
           VI  K M Y P+DR+EF  QI+ELL+LG+I PSKSP SSPAFMV           RMVI+
Sbjct: 269 VIKCKPMQYSPQDREEFKTQIEELLKLGIIRPSKSPHSSPAFMVRNHAEIKRGKARMVIN 328

Query: 223 YSQLNKITKADGYILPNMQSLLHFIKGKKIFSSFDLKSGFHQVRFKDSTKPLTAFSCLQG 44
           Y +LN  TK DGY+LPN + LL  I GK  +SSFD KSGF QVR    T  LTAFSC QG
Sbjct: 329 YKKLNDNTKGDGYLLPNKEQLLQRIGGKTYYSSFDCKSGFWQVRLAPETIQLTAFSCPQG 388

Query: 43  HFQWTVVPFGLKQA 2
           H++W V+PFGLKQA
Sbjct: 389 HYEWLVMPFGLKQA 402


>gb|ABX80508.1| RdRp [Dahlia mosaic virus]
          Length = 387

 Score =  151 bits (381), Expect = 2e-34
 Identities = 77/134 (57%), Positives = 93/134 (69%)
 Frame = -1

Query: 403 VICAKAMAYGPKDRDEFSIQIKELLELGVIEPSKSPFSSPAFMVXXXXXXXXXXXRMVID 224
           V+  K M Y P+DR EF IQIKELL+L VIEPSKS   SPAF+V           RMV++
Sbjct: 185 VVRVKPMVYSPEDRKEFEIQIKELLDLKVIEPSKSQHMSPAFLVEKEAEKRRGKKRMVVN 244

Query: 223 YSQLNKITKADGYILPNMQSLLHFIKGKKIFSSFDLKSGFHQVRFKDSTKPLTAFSCLQG 44
           Y +LN++T  D + LPNMQ L+  ++GK IFSSFD KSGF QV     ++ LTAF+C QG
Sbjct: 245 YKKLNEVTIGDSHNLPNMQELITLLRGKTIFSSFDCKSGFWQVFLDQESQKLTAFTCPQG 304

Query: 43  HFQWTVVPFGLKQA 2
           HFQW VVPFGLKQA
Sbjct: 305 HFQWRVVPFGLKQA 318


>gb|ABX80507.1| RdRp [Dahlia mosaic virus]
          Length = 387

 Score =  151 bits (381), Expect = 2e-34
 Identities = 77/134 (57%), Positives = 93/134 (69%)
 Frame = -1

Query: 403 VICAKAMAYGPKDRDEFSIQIKELLELGVIEPSKSPFSSPAFMVXXXXXXXXXXXRMVID 224
           V+  K M Y P+DR EF IQIKELL+L VIEPSKS   SPAF+V           RMV++
Sbjct: 185 VVRVKPMVYSPEDRKEFEIQIKELLDLKVIEPSKSQHMSPAFLVEKEAEKRRGKKRMVVN 244

Query: 223 YSQLNKITKADGYILPNMQSLLHFIKGKKIFSSFDLKSGFHQVRFKDSTKPLTAFSCLQG 44
           Y +LN++T  D + LPNMQ L+  ++GK IFSSFD KSGF QV     ++ LTAF+C QG
Sbjct: 245 YKKLNEVTIGDSHNLPNMQELITLLRGKTIFSSFDCKSGFWQVFLDQESQKLTAFTCPQG 304

Query: 43  HFQWTVVPFGLKQA 2
           HFQW VVPFGLKQA
Sbjct: 305 HFQWRVVPFGLKQA 318


>gb|ABX80505.1| RdRp [Dahlia mosaic virus]
          Length = 387

 Score =  151 bits (381), Expect = 2e-34
 Identities = 77/134 (57%), Positives = 93/134 (69%)
 Frame = -1

Query: 403 VICAKAMAYGPKDRDEFSIQIKELLELGVIEPSKSPFSSPAFMVXXXXXXXXXXXRMVID 224
           V+  K M Y P+DR EF IQIKELL+L VIEPSKS   SPAF+V           RMV++
Sbjct: 185 VVRVKPMVYSPEDRKEFEIQIKELLDLKVIEPSKSQHMSPAFLVEKEAEKRRGKKRMVVN 244

Query: 223 YSQLNKITKADGYILPNMQSLLHFIKGKKIFSSFDLKSGFHQVRFKDSTKPLTAFSCLQG 44
           Y +LN++T  D + LPNMQ L+  ++GK IFSSFD KSGF QV     ++ LTAF+C QG
Sbjct: 245 YKKLNEVTIGDSHNLPNMQELITLLRGKTIFSSFDCKSGFWQVFLDQESQKLTAFTCPQG 304

Query: 43  HFQWTVVPFGLKQA 2
           HFQW VVPFGLKQA
Sbjct: 305 HFQWRVVPFGLKQA 318


>gb|AEL30041.1| polymerase polyprotein [Dahlia common mosaic virus]
          Length = 673

 Score =  151 bits (381), Expect = 2e-34
 Identities = 77/134 (57%), Positives = 93/134 (69%)
 Frame = -1

Query: 403 VICAKAMAYGPKDRDEFSIQIKELLELGVIEPSKSPFSSPAFMVXXXXXXXXXXXRMVID 224
           V+  K M Y P+DR EF IQIKELL+L VIEPSKS   SPAF+V           RMV++
Sbjct: 241 VVRVKPMVYSPEDRKEFEIQIKELLDLKVIEPSKSQHMSPAFLVEKEAEKRRGKKRMVVN 300

Query: 223 YSQLNKITKADGYILPNMQSLLHFIKGKKIFSSFDLKSGFHQVRFKDSTKPLTAFSCLQG 44
           Y +LN++T  D + LPNMQ L+  ++GK IFSSFD KSGF QV     ++ LTAF+C QG
Sbjct: 301 YKKLNEVTIGDSHNLPNMQELITLLRGKTIFSSFDCKSGFWQVFLDQESQKLTAFTCPQG 360

Query: 43  HFQWTVVPFGLKQA 2
           HFQW VVPFGLKQA
Sbjct: 361 HFQWRVVPFGLKQA 374


>gb|ABW81763.1| reverse transcriptase [Dahlia mosaic virus-Holland]
          Length = 673

 Score =  151 bits (381), Expect = 2e-34
 Identities = 77/134 (57%), Positives = 93/134 (69%)
 Frame = -1

Query: 403 VICAKAMAYGPKDRDEFSIQIKELLELGVIEPSKSPFSSPAFMVXXXXXXXXXXXRMVID 224
           V+  K M Y P+DR EF IQIKELL+L VIEPSKS   SPAF+V           RMV++
Sbjct: 241 VVRVKPMVYSPEDRKEFEIQIKELLDLKVIEPSKSQHMSPAFLVEKEAEKGRGKKRMVVN 300

Query: 223 YSQLNKITKADGYILPNMQSLLHFIKGKKIFSSFDLKSGFHQVRFKDSTKPLTAFSCLQG 44
           Y +LN++T  D + LPNMQ L+  ++GK IFSSFD KSGF QV     ++ LTAF+C QG
Sbjct: 301 YKKLNEVTIGDSHNLPNMQELITLLRGKTIFSSFDCKSGFWQVFLDQESQKLTAFTCPQG 360

Query: 43  HFQWTVVPFGLKQA 2
           HFQW VVPFGLKQA
Sbjct: 361 HFQWRVVPFGLKQA 374


>gb|ABM97613.1| truncated reverse transcriptase [Dahlia mosaic virus]
          Length = 244

 Score =  151 bits (381), Expect = 2e-34
 Identities = 77/134 (57%), Positives = 93/134 (69%)
 Frame = -1

Query: 403 VICAKAMAYGPKDRDEFSIQIKELLELGVIEPSKSPFSSPAFMVXXXXXXXXXXXRMVID 224
           V+  K M Y P+DR EF IQIKELL+L VIEPSKS   SPAF+V           RMV++
Sbjct: 18  VVRVKPMVYSPEDRKEFEIQIKELLDLKVIEPSKSQHMSPAFLVEKEAEKRRGKKRMVVN 77

Query: 223 YSQLNKITKADGYILPNMQSLLHFIKGKKIFSSFDLKSGFHQVRFKDSTKPLTAFSCLQG 44
           Y +LN++T  D + LPNMQ L+  ++GK IFSSFD KSGF QV     ++ LTAF+C QG
Sbjct: 78  YKKLNEVTIGDSHNLPNMQELITLLRGKTIFSSFDCKSGFWQVFLDQESQKLTAFTCPQG 137

Query: 43  HFQWTVVPFGLKQA 2
           HFQW VVPFGLKQA
Sbjct: 138 HFQWRVVPFGLKQA 151


>gb|ABX80506.1| RdRp [Dahlia mosaic virus]
          Length = 387

 Score =  150 bits (380), Expect = 2e-34
 Identities = 77/134 (57%), Positives = 93/134 (69%)
 Frame = -1

Query: 403 VICAKAMAYGPKDRDEFSIQIKELLELGVIEPSKSPFSSPAFMVXXXXXXXXXXXRMVID 224
           V+  K M Y P+DR EF IQIKELL+L VIEPSKS   SPAF+V           RMV++
Sbjct: 185 VVRVKPMVYSPEDRKEFEIQIKELLDLKVIEPSKSQHMSPAFLVEKEAEKRRGKKRMVVN 244

Query: 223 YSQLNKITKADGYILPNMQSLLHFIKGKKIFSSFDLKSGFHQVRFKDSTKPLTAFSCLQG 44
           Y +LN++T  D + LPNMQ L+  ++GK IFSSFD KSGF QV     ++ LTAF+C QG
Sbjct: 245 YXKLNEVTIGDSHNLPNMQELITLLRGKTIFSSFDCKSGFWQVFLDQESQKLTAFTCPQG 304

Query: 43  HFQWTVVPFGLKQA 2
           HFQW VVPFGLKQA
Sbjct: 305 HFQWRVVPFGLKQA 318


>gb|ABX80503.1| RdRp [Carnation etched ring virus]
          Length = 393

 Score =  150 bits (379), Expect = 3e-34
 Identities = 75/134 (55%), Positives = 92/134 (68%)
 Frame = -1

Query: 403 VICAKAMAYGPKDRDEFSIQIKELLELGVIEPSKSPFSSPAFMVXXXXXXXXXXXRMVID 224
           ++  K M+Y P DR+EF  QIKELLEL VI+PSKSP  SPAF+V           RMV++
Sbjct: 191 IVKVKPMSYSPSDREEFDKQIKELLELKVIKPSKSPHMSPAFLVENEAERRRGKKRMVVN 250

Query: 223 YSQLNKITKADGYILPNMQSLLHFIKGKKIFSSFDLKSGFHQVRFKDSTKPLTAFSCLQG 44
           Y  +NK TK D + LPN   LL  ++GKKI+SSFD KSGF QV     ++ LTAF+C QG
Sbjct: 251 YKAINKATKGDAHNLPNKDELLALVRGKKIYSSFDCKSGFWQVLLDQESQLLTAFTCPQG 310

Query: 43  HFQWTVVPFGLKQA 2
           H+QW VVPFGLKQA
Sbjct: 311 HYQWNVVPFGLKQA 324


>gb|AHA91342.1| reverse transcriptase [Cauliflower mosaic virus]
           gi|558762564|gb|AHA91352.1| reverse transcriptase
           [Cauliflower mosaic virus]
          Length = 674

 Score =  150 bits (378), Expect = 4e-34
 Identities = 76/133 (57%), Positives = 90/133 (67%)
 Frame = -1

Query: 400 ICAKAMAYGPKDRDEFSIQIKELLELGVIEPSKSPFSSPAFMVXXXXXXXXXXXRMVIDY 221
           I  K M Y P DR+EF  QIKELL+L VI+PSKSP  +PAF+V           RMV++Y
Sbjct: 242 IKVKPMKYSPMDREEFDKQIKELLDLKVIKPSKSPHMAPAFLVNNEAEKRRGKKRMVVNY 301

Query: 220 SQLNKITKADGYILPNMQSLLHFIKGKKIFSSFDLKSGFHQVRFKDSTKPLTAFSCLQGH 41
             +NK T  D Y LPN   LL  I+GKKIFSSFD KSGF QV     ++PLTAF+C QGH
Sbjct: 302 KAMNKATVGDAYNLPNKDELLTLIRGKKIFSSFDCKSGFWQVLLDQESRPLTAFTCPQGH 361

Query: 40  FQWTVVPFGLKQA 2
           ++W VVPFGLKQA
Sbjct: 362 YEWNVVPFGLKQA 374


>gb|AHA91338.1| reverse transcriptase [Cauliflower mosaic virus]
          Length = 674

 Score =  150 bits (378), Expect = 4e-34
 Identities = 76/133 (57%), Positives = 90/133 (67%)
 Frame = -1

Query: 400 ICAKAMAYGPKDRDEFSIQIKELLELGVIEPSKSPFSSPAFMVXXXXXXXXXXXRMVIDY 221
           I  K M Y P DR+EF  QIKELL+L VI+PSKSP  +PAF+V           RMV++Y
Sbjct: 242 IKVKPMKYSPMDREEFDKQIKELLDLKVIKPSKSPHMAPAFLVNNEAEKRRGKKRMVVNY 301

Query: 220 SQLNKITKADGYILPNMQSLLHFIKGKKIFSSFDLKSGFHQVRFKDSTKPLTAFSCLQGH 41
             +NK T  D Y LPN   LL  I+GKKIFSSFD KSGF QV     ++PLTAF+C QGH
Sbjct: 302 KAMNKATVGDAYNLPNKDELLTLIRGKKIFSSFDCKSGFWQVLLDQESRPLTAFTCPQGH 361

Query: 40  FQWTVVPFGLKQA 2
           ++W VVPFGLKQA
Sbjct: 362 YEWNVVPFGLKQA 374


>gb|AHA91331.1| reverse transcriptase [Cauliflower mosaic virus]
          Length = 674

 Score =  150 bits (378), Expect = 4e-34
 Identities = 76/133 (57%), Positives = 90/133 (67%)
 Frame = -1

Query: 400 ICAKAMAYGPKDRDEFSIQIKELLELGVIEPSKSPFSSPAFMVXXXXXXXXXXXRMVIDY 221
           I  K M Y P DR+EF  QIKELL+L VI+PSKSP  +PAF+V           RMV++Y
Sbjct: 242 IKVKPMKYSPMDREEFDKQIKELLDLKVIKPSKSPHMAPAFLVNNEAEKRRGKKRMVVNY 301

Query: 220 SQLNKITKADGYILPNMQSLLHFIKGKKIFSSFDLKSGFHQVRFKDSTKPLTAFSCLQGH 41
             +NK T  D Y LPN   LL  I+GKKIFSSFD KSGF QV     ++PLTAF+C QGH
Sbjct: 302 KAMNKATVGDAYNLPNKDELLTLIRGKKIFSSFDCKSGFWQVLLDQESRPLTAFTCPQGH 361

Query: 40  FQWTVVPFGLKQA 2
           ++W VVPFGLKQA
Sbjct: 362 YEWNVVPFGLKQA 374


>gb|AHA91317.1| reverse transcriptase [Cauliflower mosaic virus]
          Length = 674

 Score =  150 bits (378), Expect = 4e-34
 Identities = 76/133 (57%), Positives = 90/133 (67%)
 Frame = -1

Query: 400 ICAKAMAYGPKDRDEFSIQIKELLELGVIEPSKSPFSSPAFMVXXXXXXXXXXXRMVIDY 221
           I  K M Y P DR+EF  QIKELL+L VI+PSKSP  +PAF+V           RMV++Y
Sbjct: 242 IKVKPMKYSPMDREEFDKQIKELLDLKVIKPSKSPHMAPAFLVNNEAEKRRGKKRMVVNY 301

Query: 220 SQLNKITKADGYILPNMQSLLHFIKGKKIFSSFDLKSGFHQVRFKDSTKPLTAFSCLQGH 41
             +NK T  D Y LPN   LL  I+GKKIFSSFD KSGF QV     ++PLTAF+C QGH
Sbjct: 302 KAMNKATVGDAYNLPNKDELLTLIRGKKIFSSFDCKSGFWQVLLDQESRPLTAFTCPQGH 361

Query: 40  FQWTVVPFGLKQA 2
           ++W VVPFGLKQA
Sbjct: 362 YEWNVVPFGLKQA 374


>gb|ABX80502.1| RdRp [Cauliflower mosaic virus]
          Length = 401

 Score =  150 bits (378), Expect = 4e-34
 Identities = 76/133 (57%), Positives = 90/133 (67%)
 Frame = -1

Query: 400 ICAKAMAYGPKDRDEFSIQIKELLELGVIEPSKSPFSSPAFMVXXXXXXXXXXXRMVIDY 221
           I  K M Y P DR+EF  QIKELL+L VI+PSKSP  +PAF+V           RMV++Y
Sbjct: 200 IKVKPMKYSPMDREEFDKQIKELLDLKVIKPSKSPHMAPAFLVNNEAEKRRGKKRMVVNY 259

Query: 220 SQLNKITKADGYILPNMQSLLHFIKGKKIFSSFDLKSGFHQVRFKDSTKPLTAFSCLQGH 41
             +NK T  D Y LPN   LL  I+GKKIFSSFD KSGF QV     ++PLTAF+C QGH
Sbjct: 260 KAMNKATVGDAYNLPNKDELLTLIRGKKIFSSFDCKSGFWQVLLDQESRPLTAFTCPQGH 319

Query: 40  FQWTVVPFGLKQA 2
           ++W VVPFGLKQA
Sbjct: 320 YEWNVVPFGLKQA 332


>gb|ABX80501.1| RdRp [Cauliflower mosaic virus]
          Length = 401

 Score =  150 bits (378), Expect = 4e-34
 Identities = 76/133 (57%), Positives = 90/133 (67%)
 Frame = -1

Query: 400 ICAKAMAYGPKDRDEFSIQIKELLELGVIEPSKSPFSSPAFMVXXXXXXXXXXXRMVIDY 221
           I  K M Y P DR+EF  QIKELL+L VI+PSKSP  +PAF+V           RMV++Y
Sbjct: 200 IKVKPMKYSPMDREEFDKQIKELLDLKVIKPSKSPHMAPAFLVNNEAEKRRGKKRMVVNY 259

Query: 220 SQLNKITKADGYILPNMQSLLHFIKGKKIFSSFDLKSGFHQVRFKDSTKPLTAFSCLQGH 41
             +NK T  D Y LPN   LL  I+GKKIFSSFD KSGF QV     ++PLTAF+C QGH
Sbjct: 260 KAMNKATVGDAYNLPNKDELLTLIRGKKIFSSFDCKSGFWQVLLDQESRPLTAFTCPQGH 319

Query: 40  FQWTVVPFGLKQA 2
           ++W VVPFGLKQA
Sbjct: 320 YEWNVVPFGLKQA 332


>gb|AAA21736.1| reverse transcriptase [Cauliflower mosaic virus]
          Length = 680

 Score =  150 bits (378), Expect = 4e-34
 Identities = 76/133 (57%), Positives = 90/133 (67%)
 Frame = -1

Query: 400 ICAKAMAYGPKDRDEFSIQIKELLELGVIEPSKSPFSSPAFMVXXXXXXXXXXXRMVIDY 221
           I  K M Y P DR+EF  QIKELL+L VI+PSKSP  +PAF+V           RMV++Y
Sbjct: 248 IKVKPMKYSPMDREEFDKQIKELLDLKVIKPSKSPHMAPAFLVNNEAEKRRGKKRMVVNY 307

Query: 220 SQLNKITKADGYILPNMQSLLHFIKGKKIFSSFDLKSGFHQVRFKDSTKPLTAFSCLQGH 41
             +NK T  D Y LPN   LL  I+GKKIFSSFD KSGF QV     ++PLTAF+C QGH
Sbjct: 308 KAMNKATVGDAYNLPNKDELLTLIRGKKIFSSFDCKSGFWQVLLDQESRPLTAFTCPQGH 367

Query: 40  FQWTVVPFGLKQA 2
           ++W VVPFGLKQA
Sbjct: 368 YEWNVVPFGLKQA 380


>dbj|BAO53680.1| reverse transcriptase [Cauliflower mosaic virus]
          Length = 674

 Score =  150 bits (378), Expect = 4e-34
 Identities = 76/133 (57%), Positives = 90/133 (67%)
 Frame = -1

Query: 400 ICAKAMAYGPKDRDEFSIQIKELLELGVIEPSKSPFSSPAFMVXXXXXXXXXXXRMVIDY 221
           I  K M Y P DR+EF  QIKELL+L VI+PSKSP  +PAF+V           RMV++Y
Sbjct: 242 IKVKPMKYSPMDREEFDKQIKELLDLKVIKPSKSPHMAPAFLVNNEAEKRRGKKRMVVNY 301

Query: 220 SQLNKITKADGYILPNMQSLLHFIKGKKIFSSFDLKSGFHQVRFKDSTKPLTAFSCLQGH 41
             +NK T  D Y LPN   LL  I+GKKIFSSFD KSGF QV     ++PLTAF+C QGH
Sbjct: 302 KAMNKATVGDAYNLPNKDELLTLIRGKKIFSSFDCKSGFWQVLLDQESRPLTAFTCPQGH 361

Query: 40  FQWTVVPFGLKQA 2
           ++W VVPFGLKQA
Sbjct: 362 YEWNVVPFGLKQA 374


>dbj|BAO53659.1| reverse transcriptase [Cauliflower mosaic virus]
          Length = 674

 Score =  150 bits (378), Expect = 4e-34
 Identities = 76/133 (57%), Positives = 90/133 (67%)
 Frame = -1

Query: 400 ICAKAMAYGPKDRDEFSIQIKELLELGVIEPSKSPFSSPAFMVXXXXXXXXXXXRMVIDY 221
           I  K M Y P DR+EF  QIKELL+L VI+PSKSP  +PAF+V           RMV++Y
Sbjct: 242 IKVKPMKYSPMDREEFDKQIKELLDLKVIKPSKSPHMAPAFLVNNEAEKRRGKKRMVVNY 301

Query: 220 SQLNKITKADGYILPNMQSLLHFIKGKKIFSSFDLKSGFHQVRFKDSTKPLTAFSCLQGH 41
             +NK T  D Y LPN   LL  I+GKKIFSSFD KSGF QV     ++PLTAF+C QGH
Sbjct: 302 KAMNKATVGDAYNLPNKDELLTLIRGKKIFSSFDCKSGFWQVLLDQESRPLTAFTCPQGH 361

Query: 40  FQWTVVPFGLKQA 2
           ++W VVPFGLKQA
Sbjct: 362 YEWNVVPFGLKQA 374