BLASTX nr result

ID: Forsythia22_contig00050788 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Forsythia22_contig00050788
         (317 letters)

Database: ./nr 
           69,698,275 sequences; 24,982,196,650 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_064004.1| orf107b gene product (mitochondrion) [Beta vulg...   116   3e-34
ref|XP_002439577.1| hypothetical protein SORBIDRAFT_09g014016 [S...    72   1e-10
ref|XP_003588352.1| NADH dehydrogenase subunit [Medicago truncat...    70   4e-10
gb|EPS74694.1| hypothetical protein M569_00069 [Genlisea aurea]        70   5e-10
emb|CBI23503.3| unnamed protein product [Vitis vinifera]               52   6e-08
ref|XP_002868452.1| predicted protein [Arabidopsis lyrata subsp....    59   1e-07
ref|XP_002446122.1| hypothetical protein SORBIDRAFT_06g002025 [S...    59   1e-06

>ref|NP_064004.1| orf107b gene product (mitochondrion) [Beta vulgaris subsp.
           vulgaris] gi|323435151|ref|YP_004222369.1| hypothetical
           protein BevumaM_p136 [Beta vulgaris subsp. maritima]
           gi|346683242|ref|YP_004842174.1| hypothetical protein
           BemaM_p130 [Beta macrocarpa] gi|9049306|dbj|BAA99316.1|
           orf107b (mitochondrion) [Beta vulgaris subsp. vulgaris]
           gi|317905601|emb|CBJ14008.1| hypothetical protein [Beta
           vulgaris subsp. maritima] gi|319439884|emb|CBJ17584.1|
           hypothetical protein [Beta vulgaris subsp. maritima]
           gi|320148038|emb|CBJ20702.1| hypothetical protein [Beta
           vulgaris subsp. maritima] gi|345500160|emb|CBX24979.1|
           hypothetical protein [Beta macrocarpa]
           gi|384977914|emb|CBL54138.1| hypothetical protein
           (mitochondrion) [Beta vulgaris subsp. maritima]
          Length = 107

 Score =  116 bits (290), Expect(2) = 3e-34
 Identities = 56/61 (91%), Positives = 57/61 (93%)
 Frame = +2

Query: 2   RVGRPKHHTTRIDANPPRYRTCDSHRIRLAQRLLNPSQAFSSTSPLQSSIKLAFPRRYEM 181
           RVGRP HHTTRIDANPPRYRTCDSHRIRLAQRLLNPS+AFSST PLQSSIKLAF RR EM
Sbjct: 14  RVGRPNHHTTRIDANPPRYRTCDSHRIRLAQRLLNPSRAFSSTFPLQSSIKLAFSRRSEM 73

Query: 182 G 184
           G
Sbjct: 74  G 74



 Score = 55.8 bits (133), Expect(2) = 3e-34
 Identities = 28/35 (80%), Positives = 30/35 (85%)
 Frame = +3

Query: 183 GVFPSPIVCIGLASSRTKEAFWRTRACRKADDYIS 287
           GVFPSPIVCIGLASSR+K  + R RACRKAD YIS
Sbjct: 74  GVFPSPIVCIGLASSRSK-LYLRARACRKADHYIS 107


>ref|XP_002439577.1| hypothetical protein SORBIDRAFT_09g014016 [Sorghum bicolor]
           gi|241944862|gb|EES18007.1| hypothetical protein
           SORBIDRAFT_09g014016, partial [Sorghum bicolor]
          Length = 100

 Score = 72.4 bits (176), Expect = 1e-10
 Identities = 32/36 (88%), Positives = 34/36 (94%)
 Frame = -2

Query: 109 WI*ESLCEPYAVRIARTVTRGVRVYTCSVVLGPTHP 2
           WI ESLCEPYAVR+ARTV RGVRVYTCSVV+GPTHP
Sbjct: 6   WIFESLCEPYAVRVARTVRRGVRVYTCSVVVGPTHP 41


>ref|XP_003588352.1| NADH dehydrogenase subunit [Medicago truncatula]
          Length = 1094

 Score = 70.5 bits (171), Expect = 4e-10
 Identities = 31/33 (93%), Positives = 33/33 (100%)
 Frame = -2

Query: 100 ESLCEPYAVRIARTVTRGVRVYTCSVVLGPTHP 2
           ESLCEPYAVR+ARTVTRGVRVYTCSVV+GPTHP
Sbjct: 91  ESLCEPYAVRVARTVTRGVRVYTCSVVVGPTHP 123


>gb|EPS74694.1| hypothetical protein M569_00069 [Genlisea aurea]
          Length = 190

 Score = 70.1 bits (170), Expect = 5e-10
 Identities = 33/36 (91%), Positives = 34/36 (94%)
 Frame = -2

Query: 256 RVRQNASLVRDEAKPIHTIGEGKTPHFIAPGERKFD 149
           R RQNASLVRDEAKP +TIGEGKTPHFIAPGERKFD
Sbjct: 80  RRRQNASLVRDEAKPKYTIGEGKTPHFIAPGERKFD 115


>emb|CBI23503.3| unnamed protein product [Vitis vinifera]
          Length = 526

 Score = 52.4 bits (124), Expect(2) = 6e-08
 Identities = 22/24 (91%), Positives = 22/24 (91%)
 Frame = -1

Query: 224 RSQADTYDRRRKDPPFHSAWGTQV 153
           RSQADTYDRRRKDPPFHS WGT V
Sbjct: 8   RSQADTYDRRRKDPPFHSTWGTGV 31



 Score = 30.8 bits (68), Expect(2) = 6e-08
 Identities = 13/16 (81%), Positives = 14/16 (87%)
 Frame = -2

Query: 49 GVRVYTCSVVLGPTHP 2
          GVRVYT SV +GPTHP
Sbjct: 30 GVRVYTYSVRVGPTHP 45


>ref|XP_002868452.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
           gi|297314288|gb|EFH44711.1| predicted protein
           [Arabidopsis lyrata subsp. lyrata]
          Length = 96

 Score = 58.5 bits (140), Expect(2) = 1e-07
 Identities = 32/52 (61%), Positives = 37/52 (71%), Gaps = 5/52 (9%)
 Frame = -1

Query: 293 LLAYVVVGLPTRTRPPECLLGSGRSQA----DTYDRRRKDPP-FHSAWGTQV 153
           LLAYV+VGLPTRTRPPECLL     +A      YDRRRKDP  F+SAW + +
Sbjct: 14  LLAYVMVGLPTRTRPPECLLFVVLDEAKPIHTIYDRRRKDPHLFNSAWASLI 65



 Score = 23.5 bits (49), Expect(2) = 1e-07
 Identities = 9/9 (100%), Positives = 9/9 (100%)
 Frame = -3

Query: 159 ASLIEDWRG 133
           ASLIEDWRG
Sbjct: 62  ASLIEDWRG 70


>ref|XP_002446122.1| hypothetical protein SORBIDRAFT_06g002025 [Sorghum bicolor]
           gi|241937305|gb|EES10450.1| hypothetical protein
           SORBIDRAFT_06g002025, partial [Sorghum bicolor]
          Length = 132

 Score = 58.9 bits (141), Expect = 1e-06
 Identities = 26/32 (81%), Positives = 26/32 (81%)
 Frame = +2

Query: 2   RVGRPKHHTTRIDANPPRYRTCDSHRIRLAQR 97
           RV RP HHTT IDANPP YRTCDSHRIRL  R
Sbjct: 17  RVSRPNHHTTCIDANPPPYRTCDSHRIRLTVR 48


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