BLASTX nr result

ID: Forsythia22_contig00050239 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Forsythia22_contig00050239
         (697 letters)

Database: ./nr 
           69,698,275 sequences; 24,982,196,650 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_008354068.1| PREDICTED: uncharacterized protein LOC103417...    65   4e-08
emb|CBL94163.1| putative RNA-directed DNA polymerase (Reverse tr...    62   3e-07

>ref|XP_008354068.1| PREDICTED: uncharacterized protein LOC103417687 [Malus domestica]
          Length = 907

 Score = 65.1 bits (157), Expect = 4e-08
 Identities = 46/117 (39%), Positives = 62/117 (52%), Gaps = 12/117 (10%)
 Frame = -2

Query: 684 LTIGI---MPLSLYLFALVEDELTGYIHDEFSWCTSFIDDIVLVDETKKW---KIISYFR 523
           +T+G+     LS YLFALV DELT +I D+  WC  F DDIVL+DET++    K+  +  
Sbjct: 614 ITVGLHQGXXLSXYLFALVMDELTXHIQDDIPWCMLFADDIVLIDETQEGVNAKLNLWXE 673

Query: 522 VLWNLQVR*VEIMMEYMEGSF*L*WE*GRWSLSC------CPKEQLFRYIGSIINKS 370
            L +  +R      EYME  F      G+  L         PK   FRY+GSI+ K+
Sbjct: 674 XLESKGLRLSRSKTEYMECKFSA--NGGQNELGVRIGDQEIPKSDRFRYLGSILXKN 728


>emb|CBL94163.1| putative RNA-directed DNA polymerase (Reverse transcriptase) [Malus
           domestica]
          Length = 622

 Score = 62.0 bits (149), Expect = 3e-07
 Identities = 44/115 (38%), Positives = 60/115 (52%), Gaps = 10/115 (8%)
 Frame = -2

Query: 684 LTIGI---MPLSLYLFALVEDELTGYIHDEFSWCTSFIDDIVLVDETKKW---KIISYFR 523
           +T+G+     LS YLFALV DELTG+I D+  WC  F  DIVL+DET++    K+  +  
Sbjct: 361 ITVGLHQGSSLSPYLFALVMDELTGHIQDDIPWCMLFAYDIVLIDETQEGVNAKLNLWRE 420

Query: 522 VLWNLQVR*VEIMMEYMEGSF*L*WE*GRWSLSC----CPKEQLFRYIGSIINKS 370
           VL +  +       EYME  F          +       PK   FRY+GSI+ K+
Sbjct: 421 VLESKGLCLSRSKTEYMECKFSANGSQNELGVRIGDQEIPKSDRFRYLGSILQKN 475


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