BLASTX nr result
ID: Forsythia22_contig00049138
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Forsythia22_contig00049138
(204 letters)
Database: ./nr
69,698,275 sequences; 24,982,196,650 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
dbj|BAA22288.1| polyprotein [Oryza australiensis] 89 9e-16
gb|ABF97047.1| retrotransposon protein, putative, Ty1-copia subc... 89 9e-16
gb|AAP44605.1| putative polyprotein [Oryza sativa Japonica Group] 89 9e-16
gb|ABG22008.1| retrotransposon protein, putative, Ty1-copia subc... 87 3e-15
emb|CAE02400.1| OSJNBa0024J22.4 [Oryza sativa Japonica Group] gi... 87 4e-15
emb|CAD39797.2| OSJNBa0071G03.10 [Oryza sativa Japonica Group] 87 6e-15
gb|ADB85430.1| putative retrotransposon protein [Phyllostachys e... 86 7e-15
gb|ABA97706.1| retrotransposon protein, putative, Ty1-copia subc... 86 1e-14
gb|ABA97342.2| retrotransposon protein, putative, Ty1-copia subc... 86 1e-14
gb|ABF96491.1| retrotransposon protein, putative, Ty1-copia subc... 85 2e-14
gb|AAP03364.1| putative polyprotein [Oryza sativa Japonica Group] 85 2e-14
gb|ADB85429.1| putative retrotransposon protein [Phyllostachys e... 85 2e-14
gb|AAX96622.1| retrotransposon protein, putative, Ty1-copia sub-... 84 5e-14
gb|EXX50149.1| gag-pol fusion protein [Rhizophagus irregularis D... 83 6e-14
gb|AAC26250.1| contains similarity to reverse transcriptase (Pfa... 83 6e-14
ref|XP_012437527.1| PREDICTED: uncharacterized protein LOC105763... 82 1e-13
gb|ABA96688.1| retrotransposon protein, putative, Ty1-copia subc... 82 2e-13
emb|CAD40475.2| OSJNBa0067G20.13 [Oryza sativa Japonica Group] 81 3e-13
gb|AAO37490.1| putative gag-pol polyprotein [Oryza sativa Japoni... 75 2e-11
ref|XP_006471604.1| PREDICTED: leucoanthocyanidin dioxygenase-li... 75 2e-11
>dbj|BAA22288.1| polyprotein [Oryza australiensis]
Length = 1317
Score = 89.4 bits (220), Expect = 9e-16
Identities = 46/67 (68%), Positives = 49/67 (73%)
Frame = -1
Query: 201 VQGYXXXXXXXXXXXXXXXSGYVFTLNGGAVSWKSSKQETTADSTTEAEYIAASEAAKEA 22
V GY SG+VF LNGGAVSWKSSKQ+T ADSTTEAEYIAASEAAKEA
Sbjct: 1159 VSGYTDASFQTDKDDYRSQSGFVFCLNGGAVSWKSSKQDTVADSTTEAEYIAASEAAKEA 1218
Query: 21 VWIKKFI 1
VWIKKF+
Sbjct: 1219 VWIKKFV 1225
>gb|ABF97047.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
Japonica Group]
Length = 1248
Score = 89.4 bits (220), Expect = 9e-16
Identities = 46/67 (68%), Positives = 49/67 (73%)
Frame = -1
Query: 201 VQGYXXXXXXXXXXXXXXXSGYVFTLNGGAVSWKSSKQETTADSTTEAEYIAASEAAKEA 22
V GY SG+VF LNGGAVSWKSSKQ+T ADSTTEAEYIAASEAAKEA
Sbjct: 1108 VNGYTDASFQTDKDDFRSQSGFVFCLNGGAVSWKSSKQDTVADSTTEAEYIAASEAAKEA 1167
Query: 21 VWIKKFI 1
VWIKKF+
Sbjct: 1168 VWIKKFV 1174
>gb|AAP44605.1| putative polyprotein [Oryza sativa Japonica Group]
Length = 1161
Score = 89.4 bits (220), Expect = 9e-16
Identities = 46/67 (68%), Positives = 49/67 (73%)
Frame = -1
Query: 201 VQGYXXXXXXXXXXXXXXXSGYVFTLNGGAVSWKSSKQETTADSTTEAEYIAASEAAKEA 22
V GY SG+VF LNGGAVSWKSSKQ+T ADSTTEAEYIAASEAAKEA
Sbjct: 1021 VNGYTDASFQTDKDDFRSQSGFVFCLNGGAVSWKSSKQDTVADSTTEAEYIAASEAAKEA 1080
Query: 21 VWIKKFI 1
VWIKKF+
Sbjct: 1081 VWIKKFV 1087
>gb|ABG22008.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
Japonica Group]
Length = 932
Score = 87.4 bits (215), Expect = 3e-15
Identities = 41/47 (87%), Positives = 44/47 (93%)
Frame = -1
Query: 141 GYVFTLNGGAVSWKSSKQETTADSTTEAEYIAASEAAKEAVWIKKFI 1
G+VF LNGGAVSWKSSKQ+T ADSTTEAEYIAASEAAKEA WIKKF+
Sbjct: 803 GFVFCLNGGAVSWKSSKQDTVADSTTEAEYIAASEAAKEAAWIKKFV 849
>emb|CAE02400.1| OSJNBa0024J22.4 [Oryza sativa Japonica Group]
gi|38347202|emb|CAD40526.2| OSJNBa0023J03.14 [Oryza
sativa Japonica Group] gi|116308930|emb|CAH66059.1|
OSIGBa0125J07.8 [Oryza sativa Indica Group]
gi|116309043|emb|CAH66155.1| OSIGBa0113B06.1 [Oryza
sativa Indica Group]
Length = 704
Score = 87.0 bits (214), Expect = 4e-15
Identities = 45/67 (67%), Positives = 47/67 (70%)
Frame = -1
Query: 201 VQGYXXXXXXXXXXXXXXXSGYVFTLNGGAVSWKSSKQETTADSTTEAEYIAASEAAKEA 22
V GY SG+VF LNGGAVSWKSSKQ T ADSTTEAEYIAASEAAKE
Sbjct: 546 VNGYTDASFQTDKDDFRSQSGFVFCLNGGAVSWKSSKQNTVADSTTEAEYIAASEAAKEV 605
Query: 21 VWIKKFI 1
VWIKKF+
Sbjct: 606 VWIKKFV 612
>emb|CAD39797.2| OSJNBa0071G03.10 [Oryza sativa Japonica Group]
Length = 948
Score = 86.7 bits (213), Expect = 6e-15
Identities = 44/67 (65%), Positives = 48/67 (71%)
Frame = -1
Query: 201 VQGYXXXXXXXXXXXXXXXSGYVFTLNGGAVSWKSSKQETTADSTTEAEYIAASEAAKEA 22
V GY SG+VF LNGG VSWKSSKQ+T ADSTTEAEYIAASEAAK+A
Sbjct: 881 VNGYTDASFQTDKDDFRSRSGFVFCLNGGVVSWKSSKQDTVADSTTEAEYIAASEAAKDA 940
Query: 21 VWIKKFI 1
VWIKKF+
Sbjct: 941 VWIKKFV 947
>gb|ADB85430.1| putative retrotransposon protein [Phyllostachys edulis]
Length = 896
Score = 86.3 bits (212), Expect = 7e-15
Identities = 45/67 (67%), Positives = 47/67 (70%)
Frame = -1
Query: 201 VQGYXXXXXXXXXXXXXXXSGYVFTLNGGAVSWKSSKQETTADSTTEAEYIAASEAAKEA 22
V GY SG+VF LNGGAVSWKSSKQET ADSTTEAEYIAASEAAKE
Sbjct: 739 VNGYTDASFQTDKDDYRSQSGFVFILNGGAVSWKSSKQETVADSTTEAEYIAASEAAKEG 798
Query: 21 VWIKKFI 1
VWI+ FI
Sbjct: 799 VWIRNFI 805
>gb|ABA97706.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
Japonica Group]
Length = 206
Score = 85.9 bits (211), Expect = 1e-14
Identities = 44/67 (65%), Positives = 48/67 (71%)
Frame = -1
Query: 201 VQGYXXXXXXXXXXXXXXXSGYVFTLNGGAVSWKSSKQETTADSTTEAEYIAASEAAKEA 22
V GY SG++F LNGGAVSWKSSKQ+ ADSTTEAEYIAASEAAKEA
Sbjct: 74 VNGYTDTSFQNDKDDFRSQSGFLFCLNGGAVSWKSSKQDIAADSTTEAEYIAASEAAKEA 133
Query: 21 VWIKKFI 1
VWIKKF+
Sbjct: 134 VWIKKFV 140
>gb|ABA97342.2| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
Japonica Group]
Length = 1050
Score = 85.9 bits (211), Expect = 1e-14
Identities = 44/67 (65%), Positives = 48/67 (71%)
Frame = -1
Query: 201 VQGYXXXXXXXXXXXXXXXSGYVFTLNGGAVSWKSSKQETTADSTTEAEYIAASEAAKEA 22
V+GY SG+VF LNGGAVSWKSSKQ+T DS TEAEYIAASEAAKEA
Sbjct: 893 VKGYTDASFQTDKDDFRSQSGFVFCLNGGAVSWKSSKQDTVVDSITEAEYIAASEAAKEA 952
Query: 21 VWIKKFI 1
VWIKKF+
Sbjct: 953 VWIKKFV 959
>gb|ABF96491.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
Japonica Group]
Length = 767
Score = 85.1 bits (209), Expect = 2e-14
Identities = 40/46 (86%), Positives = 44/46 (95%)
Frame = -1
Query: 138 YVFTLNGGAVSWKSSKQETTADSTTEAEYIAASEAAKEAVWIKKFI 1
+VF LNGGAVSWKSSKQ+T ADSTTEAEYIAASEAAK+AVWIKKF+
Sbjct: 654 FVFCLNGGAVSWKSSKQDTVADSTTEAEYIAASEAAKKAVWIKKFV 699
>gb|AAP03364.1| putative polyprotein [Oryza sativa Japonica Group]
Length = 657
Score = 85.1 bits (209), Expect = 2e-14
Identities = 40/46 (86%), Positives = 44/46 (95%)
Frame = -1
Query: 138 YVFTLNGGAVSWKSSKQETTADSTTEAEYIAASEAAKEAVWIKKFI 1
+VF LNGGAVSWKSSKQ+T ADSTTEAEYIAASEAAK+AVWIKKF+
Sbjct: 544 FVFCLNGGAVSWKSSKQDTVADSTTEAEYIAASEAAKKAVWIKKFV 589
>gb|ADB85429.1| putative retrotransposon protein [Phyllostachys edulis]
Length = 1313
Score = 84.7 bits (208), Expect = 2e-14
Identities = 44/67 (65%), Positives = 47/67 (70%)
Frame = -1
Query: 201 VQGYXXXXXXXXXXXXXXXSGYVFTLNGGAVSWKSSKQETTADSTTEAEYIAASEAAKEA 22
V GY SG+VF LNGGAVSWKSSKQET ADSTT+AEYIAASEAAKE
Sbjct: 1155 VNGYTDASFQTDKDDYRSQSGFVFILNGGAVSWKSSKQETVADSTTKAEYIAASEAAKEG 1214
Query: 21 VWIKKFI 1
VWI+ FI
Sbjct: 1215 VWIRNFI 1221
>gb|AAX96622.1| retrotransposon protein, putative, Ty1-copia sub-class [Oryza
sativa Japonica Group] gi|77550175|gb|ABA92972.1|
retrotransposon protein, putative, Ty1-copia subclass
[Oryza sativa Japonica Group]
Length = 305
Score = 83.6 bits (205), Expect = 5e-14
Identities = 39/47 (82%), Positives = 44/47 (93%)
Frame = -1
Query: 141 GYVFTLNGGAVSWKSSKQETTADSTTEAEYIAASEAAKEAVWIKKFI 1
G+VF LNGGAVSWKSSKQ+T A+STT+ EYIAASEAAKEAVWIKKF+
Sbjct: 162 GFVFCLNGGAVSWKSSKQDTLANSTTKTEYIAASEAAKEAVWIKKFV 208
>gb|EXX50149.1| gag-pol fusion protein [Rhizophagus irregularis DAOM 197198w]
Length = 1303
Score = 83.2 bits (204), Expect = 6e-14
Identities = 42/68 (61%), Positives = 48/68 (70%)
Frame = -1
Query: 204 RVQGYXXXXXXXXXXXXXXXSGYVFTLNGGAVSWKSSKQETTADSTTEAEYIAASEAAKE 25
RV+GY SG+VF LNGGAV+WKSSKQET ADST E+EYIAASEA+KE
Sbjct: 1141 RVEGYTDASFQTDRDSGRSQSGWVFLLNGGAVTWKSSKQETVADSTCESEYIAASEASKE 1200
Query: 24 AVWIKKFI 1
A W+K FI
Sbjct: 1201 AAWLKNFI 1208
>gb|AAC26250.1| contains similarity to reverse transcriptase (Pfam: rvt.hmm, score
19.29) [Arabidopsis thaliana] gi|7267136|emb|CAB80804.1|
putative retrotransposon protein [Arabidopsis thaliana]
Length = 964
Score = 83.2 bits (204), Expect = 6e-14
Identities = 43/67 (64%), Positives = 46/67 (68%)
Frame = -1
Query: 201 VQGYXXXXXXXXXXXXXXXSGYVFTLNGGAVSWKSSKQETTADSTTEAEYIAASEAAKEA 22
V GY SG+ F LNGGAVSWKS+KQ T ADSTTEAEYIAASEAAKE
Sbjct: 806 VSGYTDASFQTDKDDFRSQSGFFFCLNGGAVSWKSTKQSTVADSTTEAEYIAASEAAKEV 865
Query: 21 VWIKKFI 1
VWI+KFI
Sbjct: 866 VWIRKFI 872
>ref|XP_012437527.1| PREDICTED: uncharacterized protein LOC105763735 [Gossypium
raimondii]
Length = 169
Score = 82.4 bits (202), Expect = 1e-13
Identities = 40/47 (85%), Positives = 41/47 (87%)
Frame = -1
Query: 141 GYVFTLNGGAVSWKSSKQETTADSTTEAEYIAASEAAKEAVWIKKFI 1
G+ F LNGGAVSWKSSKQ T ADSTTEAEYI ASEAAKEAVWIK FI
Sbjct: 108 GFAFCLNGGAVSWKSSKQSTIADSTTEAEYIVASEAAKEAVWIKGFI 154
>gb|ABA96688.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
Japonica Group]
Length = 325
Score = 81.6 bits (200), Expect = 2e-13
Identities = 42/67 (62%), Positives = 46/67 (68%)
Frame = -1
Query: 201 VQGYXXXXXXXXXXXXXXXSGYVFTLNGGAVSWKSSKQETTADSTTEAEYIAASEAAKEA 22
V GY SG+VF LNGGAVSWKSSKQ+ ADSTT+ EYIAASEAAKEA
Sbjct: 185 VNGYTDASFQTDKDDFRSQSGFVFCLNGGAVSWKSSKQDIVADSTTKPEYIAASEAAKEA 244
Query: 21 VWIKKFI 1
VWI KF+
Sbjct: 245 VWINKFV 251
>emb|CAD40475.2| OSJNBa0067G20.13 [Oryza sativa Japonica Group]
Length = 462
Score = 80.9 bits (198), Expect = 3e-13
Identities = 37/46 (80%), Positives = 41/46 (89%)
Frame = -1
Query: 138 YVFTLNGGAVSWKSSKQETTADSTTEAEYIAASEAAKEAVWIKKFI 1
+VF LNGGAVSWKSSKQ+ ADSTTE EYI ASEAAKEA+WIKKF+
Sbjct: 322 FVFCLNGGAVSWKSSKQDIVADSTTEVEYITASEAAKEAIWIKKFV 367
>gb|AAO37490.1| putative gag-pol polyprotein [Oryza sativa Japonica Group]
gi|41393192|gb|AAS01915.1| putative polyprotein [Oryza
sativa Japonica Group]
Length = 547
Score = 74.7 bits (182), Expect = 2e-11
Identities = 35/39 (89%), Positives = 38/39 (97%)
Frame = -1
Query: 117 GAVSWKSSKQETTADSTTEAEYIAASEAAKEAVWIKKFI 1
GAVSWK+SKQ+T ADSTTEAEYIAASEAAKEAVWIKKF+
Sbjct: 417 GAVSWKNSKQDTVADSTTEAEYIAASEAAKEAVWIKKFV 455
>ref|XP_006471604.1| PREDICTED: leucoanthocyanidin dioxygenase-like [Citrus sinensis]
Length = 629
Score = 74.7 bits (182), Expect = 2e-11
Identities = 33/47 (70%), Positives = 39/47 (82%)
Frame = -1
Query: 141 GYVFTLNGGAVSWKSSKQETTADSTTEAEYIAASEAAKEAVWIKKFI 1
GYVF L GA+SW+S KQ ADSTTEAEY+ ASEAAKEAVW++KF+
Sbjct: 549 GYVFALGSGAISWRSVKQSCIADSTTEAEYVVASEAAKEAVWLRKFL 595