BLASTX nr result

ID: Forsythia22_contig00046906 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Forsythia22_contig00046906
         (261 letters)

Database: ./nr 
           69,698,275 sequences; 24,982,196,650 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_011086984.1| PREDICTED: pentatricopeptide repeat-containi...    62   1e-07
ref|XP_012829314.1| PREDICTED: pentatricopeptide repeat-containi...    60   8e-07

>ref|XP_011086984.1| PREDICTED: pentatricopeptide repeat-containing protein At5g50280,
           chloroplastic [Sesamum indicum]
          Length = 710

 Score = 62.4 bits (150), Expect = 1e-07
 Identities = 35/88 (39%), Positives = 51/88 (57%), Gaps = 3/88 (3%)
 Frame = -3

Query: 256 LNQRYFISPSSLPSLYTHQFSTPLFFVITKTPQK--KPTVXXXXXXXXXXXSIFLPFLQN 83
           L+ ++FIS SS  SL +  F TP   +I K  Q+  +               IFLPFLQ 
Sbjct: 5   LHSQFFISFSSFSSLSSPNFQTPQLLIIPKRSQRNLREVFCIASASTPHSSPIFLPFLQT 64

Query: 82  PGKKETHKP-EFSKIEEINDPILKFFKT 2
           P +K+T +P + ++++ I+DPILKFFKT
Sbjct: 65  PARKQTQEPQQKNEVDNIDDPILKFFKT 92


>ref|XP_012829314.1| PREDICTED: pentatricopeptide repeat-containing protein At5g50280,
           chloroplastic [Erythranthe guttatus]
           gi|604297562|gb|EYU17775.1| hypothetical protein
           MIMGU_mgv1a002101mg [Erythranthe guttata]
          Length = 714

 Score = 59.7 bits (143), Expect = 8e-07
 Identities = 37/89 (41%), Positives = 47/89 (52%), Gaps = 4/89 (4%)
 Frame = -3

Query: 256 LNQRYFISPSSLPSLYTHQFSTPLFFVITKTPQKKPTVXXXXXXXXXXXS----IFLPFL 89
           L++R+ IS S   SL++  F  P  F I K  + + T                 IFLPFL
Sbjct: 8   LHRRFSISSSPSYSLHSPHFPIPNLFKIPKLSKNQRTTFSVCCSSTSPPPPSSPIFLPFL 67

Query: 88  QNPGKKETHKPEFSKIEEINDPILKFFKT 2
           Q P +K+T KPE     EINDPI+KFFKT
Sbjct: 68  QTPARKQTPKPEPEIETEINDPIVKFFKT 96


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