BLASTX nr result

ID: Forsythia22_contig00046475 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Forsythia22_contig00046475
         (274 letters)

Database: ./nr 
           69,698,275 sequences; 24,982,196,650 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_009800589.1| PREDICTED: F-box protein SKIP1-like [Nicotia...    63   7e-08
ref|XP_009592154.1| PREDICTED: F-box protein SKIP1 [Nicotiana to...    57   5e-06
ref|XP_011083944.1| PREDICTED: F-box protein SKIP1 [Sesamum indi...    56   8e-06

>ref|XP_009800589.1| PREDICTED: F-box protein SKIP1-like [Nicotiana sylvestris]
          Length = 307

 Score = 63.2 bits (152), Expect = 7e-08
 Identities = 34/44 (77%), Positives = 39/44 (88%)
 Frame = +1

Query: 139 MDEDKEGKIADSGELANDRAELTHVCLINILSRLSLEDRWRGAM 270
           MD+DKE KIA+SG  ++D AELT +CLINILSRLSLEDRWRGAM
Sbjct: 1   MDDDKE-KIAESGP-SHDWAELTQLCLINILSRLSLEDRWRGAM 42


>ref|XP_009592154.1| PREDICTED: F-box protein SKIP1 [Nicotiana tomentosiformis]
          Length = 308

 Score = 57.0 bits (136), Expect = 5e-06
 Identities = 31/44 (70%), Positives = 34/44 (77%)
 Frame = +1

Query: 139 MDEDKEGKIADSGELANDRAELTHVCLINILSRLSLEDRWRGAM 270
           MDE+KE K  +S     D AELT +CLINILSRLSLEDRWRGAM
Sbjct: 1   MDENKEKK-TESLPSHGDWAELTQLCLINILSRLSLEDRWRGAM 43


>ref|XP_011083944.1| PREDICTED: F-box protein SKIP1 [Sesamum indicum]
          Length = 313

 Score = 56.2 bits (134), Expect = 8e-06
 Identities = 29/46 (63%), Positives = 34/46 (73%), Gaps = 2/46 (4%)
 Frame = +1

Query: 139 MDEDKEGKIADSGE--LANDRAELTHVCLINILSRLSLEDRWRGAM 270
           MD++K+ K A   E   A D AELTH CL+NI SRLSL+DRWRGAM
Sbjct: 1   MDDEKDDKNAAETERCAAADWAELTHECLVNIFSRLSLQDRWRGAM 46


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