BLASTX nr result

ID: Forsythia22_contig00046395 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Forsythia22_contig00046395
         (510 letters)

Database: ./nr 
           69,698,275 sequences; 24,982,196,650 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_011073290.1| PREDICTED: pentatricopeptide repeat-containi...    97   4e-18
ref|XP_012856600.1| PREDICTED: pentatricopeptide repeat-containi...    69   9e-10
ref|XP_012856599.1| PREDICTED: pentatricopeptide repeat-containi...    65   2e-08
ref|XP_006366292.1| PREDICTED: pentatricopeptide repeat-containi...    64   3e-08
ref|XP_004241650.1| PREDICTED: pentatricopeptide repeat-containi...    64   3e-08
ref|XP_009793646.1| PREDICTED: pentatricopeptide repeat-containi...    64   5e-08
ref|XP_009597484.1| PREDICTED: pentatricopeptide repeat-containi...    62   1e-07
emb|CDO98300.1| unnamed protein product [Coffea canephora]             60   4e-07
ref|XP_002511082.1| pentatricopeptide repeat-containing protein,...    59   1e-06
ref|XP_007038163.1| Tetratricopeptide repeat (TPR)-like superfam...    58   3e-06
ref|XP_007038162.1| Tetratricopeptide repeat-like superfamily pr...    58   3e-06

>ref|XP_011073290.1| PREDICTED: pentatricopeptide repeat-containing protein At5g50990
           [Sesamum indicum]
          Length = 547

 Score = 97.1 bits (240), Expect = 4e-18
 Identities = 53/109 (48%), Positives = 67/109 (61%), Gaps = 3/109 (2%)
 Frame = -1

Query: 318 MATVKRSL---SSLLLPSQTAIFISKSHSTISSPQANHSKPDGQMLFHILESCRLFPNLR 148
           M  V+R L    S L  S T IF  + +ST++SPQ  +S  D Q LF ILESC+L P+ R
Sbjct: 1   MEVVRRRLVSPGSSLRWSHTTIFTPRPYSTVASPQTLYSVSDDQKLFRILESCKLSPDFR 60

Query: 147 TAVAVHNKIIKHGYGMYPXXXXXXXXXXXSCEQINLACQLLGEICSLDC 1
           TAV+VH KIIKHGYG  P           +CE+ NLA QLL ++C L+C
Sbjct: 61  TAVSVHGKIIKHGYGTCPLLLSMLTKVYVACEKPNLARQLLSDVCFLNC 109


>ref|XP_012856600.1| PREDICTED: pentatricopeptide repeat-containing protein At5g50990
           isoform X2 [Erythranthe guttatus]
          Length = 551

 Score = 69.3 bits (168), Expect = 9e-10
 Identities = 37/85 (43%), Positives = 51/85 (60%)
 Frame = -1

Query: 270 TAIFISKSHSTISSPQANHSKPDGQMLFHILESCRLFPNLRTAVAVHNKIIKHGYGMYPX 91
           TA+F  K H T++SPQ  +   D ++LF ILESC+   + RTAV+VH KIIKHGY  Y  
Sbjct: 25  TAVFTPKPHPTVASPQNIYPITDDRVLFAILESCKQPHHFRTAVSVHCKIIKHGYETYSS 84

Query: 90  XXXXXXXXXXSCEQINLACQLLGEI 16
                     +C++  LA QLL ++
Sbjct: 85  LLSTLLKVYTACKKPKLAHQLLDDV 109


>ref|XP_012856599.1| PREDICTED: pentatricopeptide repeat-containing protein At5g50990
           isoform X1 [Erythranthe guttatus]
          Length = 554

 Score = 64.7 bits (156), Expect = 2e-08
 Identities = 37/88 (42%), Positives = 51/88 (57%), Gaps = 3/88 (3%)
 Frame = -1

Query: 270 TAIFISKSHSTISSPQANH---SKPDGQMLFHILESCRLFPNLRTAVAVHNKIIKHGYGM 100
           TA+F  K H T++SPQ  +      D ++LF ILESC+   + RTAV+VH KIIKHGY  
Sbjct: 25  TAVFTPKPHPTVASPQNIYPITEYEDDRVLFAILESCKQPHHFRTAVSVHCKIIKHGYET 84

Query: 99  YPXXXXXXXXXXXSCEQINLACQLLGEI 16
           Y            +C++  LA QLL ++
Sbjct: 85  YSSLLSTLLKVYTACKKPKLAHQLLDDV 112


>ref|XP_006366292.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g50990-like [Solanum tuberosum]
          Length = 556

 Score = 64.3 bits (155), Expect = 3e-08
 Identities = 34/72 (47%), Positives = 41/72 (56%)
 Frame = -1

Query: 231 SPQANHSKPDGQMLFHILESCRLFPNLRTAVAVHNKIIKHGYGMYPXXXXXXXXXXXSCE 52
           SP  +H   D   L  ILE+C++ PNLRT    H  IIK GYGMYP           SC+
Sbjct: 43  SPTESHYSQDYHRLLCILEACKVSPNLRTTAGAHANIIKLGYGMYPSLISLMVVTYASCD 102

Query: 51  QINLACQLLGEI 16
           ++NLA QLL EI
Sbjct: 103 RLNLARQLLVEI 114


>ref|XP_004241650.1| PREDICTED: pentatricopeptide repeat-containing protein At5g50990
           [Solanum lycopersicum]
          Length = 554

 Score = 64.3 bits (155), Expect = 3e-08
 Identities = 39/95 (41%), Positives = 52/95 (54%)
 Frame = -1

Query: 300 SLSSLLLPSQTAIFISKSHSTISSPQANHSKPDGQMLFHILESCRLFPNLRTAVAVHNKI 121
           SL S  L + +A   +  H ++S P  +H   D   L  ILE+C++ PNLRT    H  I
Sbjct: 19  SLFSPWLQNLSATLSTGLHLSLS-PTESHYSQDYHRLLCILEACKMSPNLRTTAGAHANI 77

Query: 120 IKHGYGMYPXXXXXXXXXXXSCEQINLACQLLGEI 16
           IK GYG+YP           SC+++NLA QLL EI
Sbjct: 78  IKLGYGVYPSLISLMVVTYASCDRLNLARQLLVEI 112


>ref|XP_009793646.1| PREDICTED: pentatricopeptide repeat-containing protein At5g50990
           [Nicotiana sylvestris] gi|698494977|ref|XP_009793647.1|
           PREDICTED: pentatricopeptide repeat-containing protein
           At5g50990 [Nicotiana sylvestris]
           gi|698494980|ref|XP_009793648.1| PREDICTED:
           pentatricopeptide repeat-containing protein At5g50990
           [Nicotiana sylvestris]
          Length = 549

 Score = 63.5 bits (153), Expect = 5e-08
 Identities = 35/78 (44%), Positives = 46/78 (58%)
 Frame = -1

Query: 249 SHSTISSPQANHSKPDGQMLFHILESCRLFPNLRTAVAVHNKIIKHGYGMYPXXXXXXXX 70
           S ++ S P+ ++S+ D   L  ILE C+  PNLRT V  H  +IK GYGMYP        
Sbjct: 31  SSNSFSPPECHYSQ-DHHRLLCILEGCKKSPNLRTTVGTHAYVIKLGYGMYPSLVSLMVV 89

Query: 69  XXXSCEQINLACQLLGEI 16
              SC+++NLA QLL EI
Sbjct: 90  TYVSCDKLNLARQLLDEI 107


>ref|XP_009597484.1| PREDICTED: pentatricopeptide repeat-containing protein At5g50990
           isoform X1 [Nicotiana tomentosiformis]
          Length = 555

 Score = 62.4 bits (150), Expect = 1e-07
 Identities = 35/85 (41%), Positives = 49/85 (57%)
 Frame = -1

Query: 270 TAIFISKSHSTISSPQANHSKPDGQMLFHILESCRLFPNLRTAVAVHNKIIKHGYGMYPX 91
           ++ F + +H + S P++++S+ D   L  ILE C+  PNLRT   +H  IIK GYGMYP 
Sbjct: 30  SSTFSTGAHLSFSPPESHYSQ-DYHRLLCILEGCKKSPNLRTIAGIHANIIKLGYGMYPS 88

Query: 90  XXXXXXXXXXSCEQINLACQLLGEI 16
                     SC++  LA QLL EI
Sbjct: 89  LISLMVVTYVSCDKFILARQLLDEI 113


>emb|CDO98300.1| unnamed protein product [Coffea canephora]
          Length = 512

 Score = 60.5 bits (145), Expect = 4e-07
 Identities = 29/61 (47%), Positives = 38/61 (62%)
 Frame = -1

Query: 198 QMLFHILESCRLFPNLRTAVAVHNKIIKHGYGMYPXXXXXXXXXXXSCEQINLACQLLGE 19
           Q L  ILE+C+   +LRT +A+H KI+KHGYGMYP           +C+  NLAC+L  E
Sbjct: 10  QTLVQILEACKSSHDLRTVIAMHAKIVKHGYGMYPSMLSLLISIYVTCQCRNLACELQKE 69

Query: 18  I 16
           I
Sbjct: 70  I 70


>ref|XP_002511082.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223550197|gb|EEF51684.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 274

 Score = 58.9 bits (141), Expect = 1e-06
 Identities = 24/65 (36%), Positives = 39/65 (60%)
 Frame = -1

Query: 204 DGQMLFHILESCRLFPNLRTAVAVHNKIIKHGYGMYPXXXXXXXXXXXSCEQINLACQLL 25
           D Q+  H+LE+C+L  +L+TA+  H +II+ GYG YP            C+  NLAC+++
Sbjct: 9   DYQLFIHLLEACKLSLDLKTAIETHARIIRFGYGTYPSLAASLVSTYVKCDHFNLACEVI 68

Query: 24  GEICS 10
            ++ S
Sbjct: 69  NQVFS 73


>ref|XP_007038163.1| Tetratricopeptide repeat (TPR)-like superfamily protein isoform 2
           [Theobroma cacao] gi|508775408|gb|EOY22664.1|
           Tetratricopeptide repeat (TPR)-like superfamily protein
           isoform 2 [Theobroma cacao]
          Length = 542

 Score = 57.8 bits (138), Expect = 3e-06
 Identities = 33/103 (32%), Positives = 52/103 (50%), Gaps = 1/103 (0%)
 Frame = -1

Query: 306 KRSLSSLLLPSQTAIFISKSHSTIS-SPQANHSKPDGQMLFHILESCRLFPNLRTAVAVH 130
           +  +  L+  +  AI  + SH+++S SP   H   D + +  ILE+C+L  + +TA A+H
Sbjct: 3   RNGVKKLIQQTSAAIRCTHSHTSLSFSPDFLHHSRDHRTVCEILEACKLSSDYKTASAIH 62

Query: 129 NKIIKHGYGMYPXXXXXXXXXXXSCEQINLACQLLGEICSLDC 1
             I K GYG YP            C  + LA QL+ ++   DC
Sbjct: 63  AIIFKLGYGTYPSLVTTLISTYLQCGWLVLAHQLIDQVFRSDC 105


>ref|XP_007038162.1| Tetratricopeptide repeat-like superfamily protein isoform 1
           [Theobroma cacao] gi|508775407|gb|EOY22663.1|
           Tetratricopeptide repeat-like superfamily protein
           isoform 1 [Theobroma cacao]
          Length = 568

 Score = 57.8 bits (138), Expect = 3e-06
 Identities = 33/103 (32%), Positives = 52/103 (50%), Gaps = 1/103 (0%)
 Frame = -1

Query: 306 KRSLSSLLLPSQTAIFISKSHSTIS-SPQANHSKPDGQMLFHILESCRLFPNLRTAVAVH 130
           +  +  L+  +  AI  + SH+++S SP   H   D + +  ILE+C+L  + +TA A+H
Sbjct: 3   RNGVKKLIQQTSAAIRCTHSHTSLSFSPDFLHHSRDHRTVCEILEACKLSSDYKTASAIH 62

Query: 129 NKIIKHGYGMYPXXXXXXXXXXXSCEQINLACQLLGEICSLDC 1
             I K GYG YP            C  + LA QL+ ++   DC
Sbjct: 63  AIIFKLGYGTYPSLVTTLISTYLQCGWLVLAHQLIDQVFRSDC 105


Top