BLASTX nr result
ID: Forsythia22_contig00046298
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Forsythia22_contig00046298
(271 letters)
Database: ./nr
69,698,275 sequences; 24,982,196,650 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
emb|CAN65540.1| hypothetical protein VITISV_029946 [Vitis vinifera] 142 9e-32
emb|CAN76546.1| hypothetical protein VITISV_010420 [Vitis vinifera] 136 5e-30
ref|XP_010526684.1| PREDICTED: retrovirus-related Pol polyprotei... 131 2e-28
ref|XP_010526683.1| PREDICTED: retrovirus-related Pol polyprotei... 131 2e-28
ref|XP_010526682.1| PREDICTED: retrovirus-related Pol polyprotei... 131 2e-28
ref|XP_010526681.1| PREDICTED: retrovirus-related Pol polyprotei... 131 2e-28
ref|XP_010526680.1| PREDICTED: retrovirus-related Pol polyprotei... 131 2e-28
ref|XP_010526678.1| PREDICTED: retrovirus-related Pol polyprotei... 131 2e-28
gb|AAG10817.1|AC011808_5 Putative retroelement polyprotein [Arab... 130 3e-28
gb|AAB61111.1| Strong similarity to Zea mays retrotransposon Hop... 130 3e-28
ref|XP_009121252.1| PREDICTED: uncharacterized protein LOC103846... 130 5e-28
dbj|BAB10503.1| retroelement pol polyprotein-like [Arabidopsis t... 129 8e-28
gb|AAD25646.1| putative retroelement pol polyprotein [Arabidopsi... 128 1e-27
ref|XP_010451244.1| PREDICTED: uncharacterized protein LOC104733... 128 2e-27
emb|CAA72989.1| unnamed protein product [Brassica oleracea var. ... 127 2e-27
ref|XP_009109940.1| PREDICTED: uncharacterized protein LOC103835... 126 6e-27
ref|XP_009150436.1| PREDICTED: uncharacterized protein LOC103873... 124 2e-26
ref|XP_010532348.1| PREDICTED: uncharacterized protein LOC104808... 124 2e-26
emb|CAB10526.1| retrotransposon like protein [Arabidopsis thalia... 124 2e-26
gb|AAF79879.1|AC000348_32 T7N9.5 [Arabidopsis thaliana] 122 9e-26
>emb|CAN65540.1| hypothetical protein VITISV_029946 [Vitis vinifera]
Length = 1240
Score = 142 bits (358), Expect = 9e-32
Identities = 62/88 (70%), Positives = 78/88 (88%)
Frame = +3
Query: 6 NSVVEKKHQHLLNVARALLFQSGISLGYWDDAVLTATHLINRLPSPLLNHKTPFEILHSK 185
NSVVE+KHQH+LNVA AL FQS I +GYW D VLT+ +LIN++PSPLLN+KTPFE+L+ K
Sbjct: 526 NSVVERKHQHILNVAXALYFQSNIPIGYWGDCVLTSVYLINQIPSPLLNNKTPFELLYHK 585
Query: 186 VPNYMHLRAFGCLCYASTLPSSRHKFTP 269
P+Y HL++FGCLCY+STLPS+RHKF+P
Sbjct: 586 SPSYSHLKSFGCLCYSSTLPSTRHKFSP 613
>emb|CAN76546.1| hypothetical protein VITISV_010420 [Vitis vinifera]
Length = 1288
Score = 136 bits (343), Expect = 5e-30
Identities = 61/88 (69%), Positives = 73/88 (82%)
Frame = +3
Query: 6 NSVVEKKHQHLLNVARALLFQSGISLGYWDDAVLTATHLINRLPSPLLNHKTPFEILHSK 185
NSVVE+KHQH+LNVARALLF S + + YW D +LTA +LINR PSP LN+KTPFEILH K
Sbjct: 568 NSVVERKHQHILNVARALLFXSSLPVCYWSDCILTAVYLINRTPSPFLNNKTPFEILHDK 627
Query: 186 VPNYMHLRAFGCLCYASTLPSSRHKFTP 269
+P+Y HLR FGCLCY STL ++R KF+P
Sbjct: 628 LPDYSHLRVFGCLCYVSTLKANRTKFSP 655
>ref|XP_010526684.1| PREDICTED: retrovirus-related Pol polyprotein from transposon TNT
1-94 isoform X6 [Tarenaya hassleriana]
Length = 789
Score = 131 bits (329), Expect = 2e-28
Identities = 58/88 (65%), Positives = 69/88 (78%)
Frame = +3
Query: 6 NSVVEKKHQHLLNVARALLFQSGISLGYWDDAVLTATHLINRLPSPLLNHKTPFEILHSK 185
NS+VE+KHQH+LNVARALLFQS + L +W D +LT+ +LINR PSPLL +KTPFE+L
Sbjct: 246 NSIVERKHQHILNVARALLFQSNVPLAFWGDCILTSVYLINRTPSPLLQNKTPFELLTGC 305
Query: 186 VPNYMHLRAFGCLCYASTLPSSRHKFTP 269
P+Y HLR FGCLCY STL RHKF P
Sbjct: 306 SPSYSHLRVFGCLCYVSTLTKDRHKFNP 333
>ref|XP_010526683.1| PREDICTED: retrovirus-related Pol polyprotein from transposon TNT
1-94 isoform X5 [Tarenaya hassleriana]
Length = 886
Score = 131 bits (329), Expect = 2e-28
Identities = 58/88 (65%), Positives = 69/88 (78%)
Frame = +3
Query: 6 NSVVEKKHQHLLNVARALLFQSGISLGYWDDAVLTATHLINRLPSPLLNHKTPFEILHSK 185
NS+VE+KHQH+LNVARALLFQS + L +W D +LT+ +LINR PSPLL +KTPFE+L
Sbjct: 343 NSIVERKHQHILNVARALLFQSNVPLAFWGDCILTSVYLINRTPSPLLQNKTPFELLTGC 402
Query: 186 VPNYMHLRAFGCLCYASTLPSSRHKFTP 269
P+Y HLR FGCLCY STL RHKF P
Sbjct: 403 SPSYSHLRVFGCLCYVSTLTKDRHKFNP 430
>ref|XP_010526682.1| PREDICTED: retrovirus-related Pol polyprotein from transposon TNT
1-94 isoform X4 [Tarenaya hassleriana]
Length = 940
Score = 131 bits (329), Expect = 2e-28
Identities = 58/88 (65%), Positives = 69/88 (78%)
Frame = +3
Query: 6 NSVVEKKHQHLLNVARALLFQSGISLGYWDDAVLTATHLINRLPSPLLNHKTPFEILHSK 185
NS+VE+KHQH+LNVARALLFQS + L +W D +LT+ +LINR PSPLL +KTPFE+L
Sbjct: 397 NSIVERKHQHILNVARALLFQSNVPLAFWGDCILTSVYLINRTPSPLLQNKTPFELLTGC 456
Query: 186 VPNYMHLRAFGCLCYASTLPSSRHKFTP 269
P+Y HLR FGCLCY STL RHKF P
Sbjct: 457 SPSYSHLRVFGCLCYVSTLTKDRHKFNP 484
>ref|XP_010526681.1| PREDICTED: retrovirus-related Pol polyprotein from transposon TNT
1-94 isoform X3 [Tarenaya hassleriana]
Length = 1238
Score = 131 bits (329), Expect = 2e-28
Identities = 58/88 (65%), Positives = 69/88 (78%)
Frame = +3
Query: 6 NSVVEKKHQHLLNVARALLFQSGISLGYWDDAVLTATHLINRLPSPLLNHKTPFEILHSK 185
NS+VE+KHQH+LNVARALLFQS + L +W D +LT+ +LINR PSPLL +KTPFE+L
Sbjct: 732 NSIVERKHQHILNVARALLFQSNVPLAFWGDCILTSVYLINRTPSPLLQNKTPFELLTGC 791
Query: 186 VPNYMHLRAFGCLCYASTLPSSRHKFTP 269
P+Y HLR FGCLCY STL RHKF P
Sbjct: 792 SPSYSHLRVFGCLCYVSTLTKDRHKFNP 819
>ref|XP_010526680.1| PREDICTED: retrovirus-related Pol polyprotein from transposon TNT
1-94 isoform X2 [Tarenaya hassleriana]
Length = 1244
Score = 131 bits (329), Expect = 2e-28
Identities = 58/88 (65%), Positives = 69/88 (78%)
Frame = +3
Query: 6 NSVVEKKHQHLLNVARALLFQSGISLGYWDDAVLTATHLINRLPSPLLNHKTPFEILHSK 185
NS+VE+KHQH+LNVARALLFQS + L +W D +LT+ +LINR PSPLL +KTPFE+L
Sbjct: 701 NSIVERKHQHILNVARALLFQSNVPLAFWGDCILTSVYLINRTPSPLLQNKTPFELLTGC 760
Query: 186 VPNYMHLRAFGCLCYASTLPSSRHKFTP 269
P+Y HLR FGCLCY STL RHKF P
Sbjct: 761 SPSYSHLRVFGCLCYVSTLTKDRHKFNP 788
>ref|XP_010526678.1| PREDICTED: retrovirus-related Pol polyprotein from transposon TNT
1-94 isoform X1 [Tarenaya hassleriana]
Length = 1275
Score = 131 bits (329), Expect = 2e-28
Identities = 58/88 (65%), Positives = 69/88 (78%)
Frame = +3
Query: 6 NSVVEKKHQHLLNVARALLFQSGISLGYWDDAVLTATHLINRLPSPLLNHKTPFEILHSK 185
NS+VE+KHQH+LNVARALLFQS + L +W D +LT+ +LINR PSPLL +KTPFE+L
Sbjct: 732 NSIVERKHQHILNVARALLFQSNVPLAFWGDCILTSVYLINRTPSPLLQNKTPFELLTGC 791
Query: 186 VPNYMHLRAFGCLCYASTLPSSRHKFTP 269
P+Y HLR FGCLCY STL RHKF P
Sbjct: 792 SPSYSHLRVFGCLCYVSTLTKDRHKFNP 819
>gb|AAG10817.1|AC011808_5 Putative retroelement polyprotein [Arabidopsis thaliana]
Length = 1413
Score = 130 bits (327), Expect = 3e-28
Identities = 59/86 (68%), Positives = 71/86 (82%)
Frame = +3
Query: 6 NSVVEKKHQHLLNVARALLFQSGISLGYWDDAVLTATHLINRLPSPLLNHKTPFEILHSK 185
NSVVE+KHQH+LNVARALLFQS I L YW D +LTA +INR PSP++++KT FE+L K
Sbjct: 688 NSVVERKHQHILNVARALLFQSQIPLSYWGDCILTAVFIINRTPSPVISNKTLFEMLTKK 747
Query: 186 VPNYMHLRAFGCLCYASTLPSSRHKF 263
VP+Y HL++FGCLCYAST P RHKF
Sbjct: 748 VPDYTHLKSFGCLCYASTSPKQRHKF 773
>gb|AAB61111.1| Strong similarity to Zea mays retrotransposon Hopscotch polyprotein
(gb|U12626) [Arabidopsis thaliana]
Length = 1315
Score = 130 bits (327), Expect = 3e-28
Identities = 57/88 (64%), Positives = 69/88 (78%)
Frame = +3
Query: 6 NSVVEKKHQHLLNVARALLFQSGISLGYWDDAVLTATHLINRLPSPLLNHKTPFEILHSK 185
NSVVE+KHQH+LNVAR+L FQS I + YW D +LTA +LINRLP+P+L K PFE+L
Sbjct: 561 NSVVERKHQHILNVARSLFFQSHIPISYWGDCILTAVYLINRLPAPILEDKCPFEVLTKT 620
Query: 186 VPNYMHLRAFGCLCYASTLPSSRHKFTP 269
VP Y H++ FGCLCYAST P RHKF+P
Sbjct: 621 VPTYDHIKVFGCLCYASTSPKDRHKFSP 648
>ref|XP_009121252.1| PREDICTED: uncharacterized protein LOC103846085 [Brassica rapa]
Length = 860
Score = 130 bits (326), Expect = 5e-28
Identities = 58/88 (65%), Positives = 70/88 (79%)
Frame = +3
Query: 6 NSVVEKKHQHLLNVARALLFQSGISLGYWDDAVLTATHLINRLPSPLLNHKTPFEILHSK 185
NSVVE+KHQH+LNVARAL+FQS +SL YW D VLTA LINRLPSPLL K+P+++LH K
Sbjct: 649 NSVVERKHQHILNVARALMFQSKLSLEYWSDCVLTAVFLINRLPSPLLQDKSPYQLLHKK 708
Query: 186 VPNYMHLRAFGCLCYASTLPSSRHKFTP 269
P+Y ++ FGCLCY ST +RHKF P
Sbjct: 709 KPDYSEIKVFGCLCYVSTSSKNRHKFQP 736
>dbj|BAB10503.1| retroelement pol polyprotein-like [Arabidopsis thaliana]
Length = 1475
Score = 129 bits (324), Expect = 8e-28
Identities = 56/88 (63%), Positives = 72/88 (81%)
Frame = +3
Query: 6 NSVVEKKHQHLLNVARALLFQSGISLGYWDDAVLTATHLINRLPSPLLNHKTPFEILHSK 185
NSVVE+KHQH+LNVARAL+F++ + L +W D +L+A LINRLP+PLL++K+PFE+LH K
Sbjct: 740 NSVVERKHQHILNVARALMFEANMPLEFWGDCILSAVFLINRLPTPLLSNKSPFELLHLK 799
Query: 186 VPNYMHLRAFGCLCYASTLPSSRHKFTP 269
VP+Y L+ FGCLCY ST P RHKF P
Sbjct: 800 VPDYTSLKVFGCLCYESTSPQQRHKFAP 827
>gb|AAD25646.1| putative retroelement pol polyprotein [Arabidopsis thaliana]
Length = 1461
Score = 128 bits (322), Expect = 1e-27
Identities = 59/88 (67%), Positives = 70/88 (79%)
Frame = +3
Query: 6 NSVVEKKHQHLLNVARALLFQSGISLGYWDDAVLTATHLINRLPSPLLNHKTPFEILHSK 185
NSVVE+KHQH+LNVARAL+FQS +SL YW D VLTA LINR PS LL++KTPFE+L K
Sbjct: 723 NSVVERKHQHILNVARALMFQSNMSLPYWGDCVLTAVFLINRTPSALLSNKTPFEVLTGK 782
Query: 186 VPNYMHLRAFGCLCYASTLPSSRHKFTP 269
+P+Y L+ FGCLCY+ST RHKF P
Sbjct: 783 LPDYSQLKTFGCLCYSSTSSKQRHKFLP 810
>ref|XP_010451244.1| PREDICTED: uncharacterized protein LOC104733360 [Camelina sativa]
Length = 1126
Score = 128 bits (321), Expect = 2e-27
Identities = 58/88 (65%), Positives = 68/88 (77%)
Frame = +3
Query: 6 NSVVEKKHQHLLNVARALLFQSGISLGYWDDAVLTATHLINRLPSPLLNHKTPFEILHSK 185
NSVVE KHQH+LNV RAL FQS + L YW D +LTA LINR PSPLL++KTP+E+L +K
Sbjct: 539 NSVVEHKHQHILNVVRALRFQSQVPLSYWGDCILTAVFLINRTPSPLLSNKTPYELLTNK 598
Query: 186 VPNYMHLRAFGCLCYASTLPSSRHKFTP 269
P+Y +R FGCLCYAST P RHKF P
Sbjct: 599 PPDYTRIRTFGCLCYASTSPKQRHKFQP 626
>emb|CAA72989.1| unnamed protein product [Brassica oleracea var. viridis]
Length = 1131
Score = 127 bits (320), Expect = 2e-27
Identities = 59/88 (67%), Positives = 67/88 (76%)
Frame = +3
Query: 6 NSVVEKKHQHLLNVARALLFQSGISLGYWDDAVLTATHLINRLPSPLLNHKTPFEILHSK 185
NSV+E+KHQHLLNVARAL+FQS + L YW D VLTA LINR PSPLL +K+P+E+L K
Sbjct: 672 NSVLERKHQHLLNVARALMFQSQVPLQYWGDCVLTAAFLINRTPSPLLANKSPYEVLMGK 731
Query: 186 VPNYMHLRAFGCLCYASTLPSSRHKFTP 269
P Y LR FGCLCY ST P RHKF P
Sbjct: 732 APQYDQLRTFGCLCYGSTSPKQRHKFMP 759
>ref|XP_009109940.1| PREDICTED: uncharacterized protein LOC103835509 [Brassica rapa]
Length = 944
Score = 126 bits (316), Expect = 6e-27
Identities = 57/88 (64%), Positives = 70/88 (79%)
Frame = +3
Query: 6 NSVVEKKHQHLLNVARALLFQSGISLGYWDDAVLTATHLINRLPSPLLNHKTPFEILHSK 185
NSVVE+KHQHLLNVARALLFQS + L YW D + T+ LINR PSPLL+H+TP+E+L +
Sbjct: 742 NSVVERKHQHLLNVARALLFQSNVPLLYWSDCITTSVFLINRTPSPLLDHRTPYEVLLKR 801
Query: 186 VPNYMHLRAFGCLCYASTLPSSRHKFTP 269
P+Y LR+FGCLCY STL R+KF+P
Sbjct: 802 KPDYSLLRSFGCLCYVSTLQKDRNKFSP 829
>ref|XP_009150436.1| PREDICTED: uncharacterized protein LOC103873788 [Brassica rapa]
Length = 921
Score = 124 bits (312), Expect = 2e-26
Identities = 56/88 (63%), Positives = 69/88 (78%)
Frame = +3
Query: 6 NSVVEKKHQHLLNVARALLFQSGISLGYWDDAVLTATHLINRLPSPLLNHKTPFEILHSK 185
NSVVE+KHQH+LNVARAL+FQSG+SL W D VLTA LINR PS LL++K+P+++L +
Sbjct: 677 NSVVERKHQHILNVARALMFQSGVSLSLWGDCVLTAVFLINRTPSQLLSNKSPYQVLTNT 736
Query: 186 VPNYMHLRAFGCLCYASTLPSSRHKFTP 269
P+Y L+ FGCLCY ST P RHKF P
Sbjct: 737 DPDYTQLKTFGCLCYGSTSPKQRHKFLP 764
>ref|XP_010532348.1| PREDICTED: uncharacterized protein LOC104808371 [Tarenaya
hassleriana]
Length = 1788
Score = 124 bits (311), Expect = 2e-26
Identities = 56/87 (64%), Positives = 68/87 (78%)
Frame = +3
Query: 6 NSVVEKKHQHLLNVARALLFQSGISLGYWDDAVLTATHLINRLPSPLLNHKTPFEILHSK 185
NSVVE+KHQH+LNVAR+L+FQS + YW D V A +LINRLPSP+L KTP+E+L+ K
Sbjct: 479 NSVVERKHQHILNVARSLMFQSNVPAEYWSDCVRCAIYLINRLPSPVLQEKTPYEVLYDK 538
Query: 186 VPNYMHLRAFGCLCYASTLPSSRHKFT 266
P Y HLRAFGCLCY+ST RHKF+
Sbjct: 539 PPAYEHLRAFGCLCYSSTNLKDRHKFS 565
>emb|CAB10526.1| retrotransposon like protein [Arabidopsis thaliana]
gi|7268497|emb|CAB78748.1| retrotransposon like protein
[Arabidopsis thaliana]
Length = 1433
Score = 124 bits (311), Expect = 2e-26
Identities = 58/88 (65%), Positives = 69/88 (78%)
Frame = +3
Query: 6 NSVVEKKHQHLLNVARALLFQSGISLGYWDDAVLTATHLINRLPSPLLNHKTPFEILHSK 185
NSVVE+KHQH+LNVARALLFQS I L +W D VLTA LINRLP+P+LN+K+P+E L +
Sbjct: 698 NSVVERKHQHILNVARALLFQSNIPLEFWGDCVLTAVFLINRLPTPVLNNKSPYEKLKNI 757
Query: 186 VPNYMHLRAFGCLCYASTLPSSRHKFTP 269
P Y L+ FGCLCY+ST P RHKF P
Sbjct: 758 PPAYESLKTFGCLCYSSTSPKQRHKFEP 785
>gb|AAF79879.1|AC000348_32 T7N9.5 [Arabidopsis thaliana]
Length = 1436
Score = 122 bits (306), Expect = 9e-26
Identities = 59/88 (67%), Positives = 68/88 (77%)
Frame = +3
Query: 6 NSVVEKKHQHLLNVARALLFQSGISLGYWDDAVLTATHLINRLPSPLLNHKTPFEILHSK 185
N VVE+KHQHLLNVARAL+FQSGI L YW D VLTA LINRL SP++N++TP+E L
Sbjct: 713 NFVVERKHQHLLNVARALMFQSGIPLEYWGDCVLTAVFLINRLLSPVINNETPYERLTKG 772
Query: 186 VPNYMHLRAFGCLCYASTLPSSRHKFTP 269
P+Y L+AFGCLCY ST P SR KF P
Sbjct: 773 KPDYSSLKAFGCLCYCSTSPKSRTKFDP 800