BLASTX nr result

ID: Forsythia22_contig00046198 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Forsythia22_contig00046198
         (772 letters)

Database: ./nr 
           69,698,275 sequences; 24,982,196,650 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|YP_009049761.1| hypothetical protein (mitochondrion) [Capsic...    80   1e-12
ref|YP_006291827.1| orf43 gene product (mitochondrion) [Daucus c...    68   7e-09
gb|AHJ81032.1| orf108a (mitochondrion) [Panax ginseng]                 50   3e-06

>ref|YP_009049761.1| hypothetical protein (mitochondrion) [Capsicum annuum]
           gi|667751874|gb|AIG89961.1| hypothetical protein
           (mitochondrion) [Capsicum annuum]
           gi|667752033|gb|AIG90119.1| hypothetical protein
           (mitochondrion) [Capsicum annuum]
          Length = 142

 Score = 80.1 bits (196), Expect = 1e-12
 Identities = 39/48 (81%), Positives = 40/48 (83%)
 Frame = +3

Query: 228 IRRKGFAFRLLFEAGLDERKQVRDSLSLSAWRGSPPCHLKGKQEEGLR 371
           I RKGFAFR LFEAGLDER QVRDSLSLSAW GSPPCHLKG+  E  R
Sbjct: 80  IGRKGFAFRSLFEAGLDERGQVRDSLSLSAWSGSPPCHLKGEVAEASR 127


>ref|YP_006291827.1| orf43 gene product (mitochondrion) [Daucus carota subsp. sativus]
           gi|374081989|gb|AEY81181.1| orf43 (mitochondrion)
           [Daucus carota subsp. sativus]
          Length = 171

 Score = 67.8 bits (164), Expect = 7e-09
 Identities = 34/46 (73%), Positives = 36/46 (78%)
 Frame = -1

Query: 364 PSSCFPFK*QGGEPRQAESDSESRTCLRSSKPASKSNRKAKPFLRI 227
           PS  FP   +GG P QAESDSESRTC RSSKP SKS+RKAKPFL I
Sbjct: 21  PSLAFPLSDKGGGPLQAESDSESRTCPRSSKPTSKSDRKAKPFLPI 66


>gb|AHJ81032.1| orf108a (mitochondrion) [Panax ginseng]
          Length = 97

 Score = 49.7 bits (117), Expect(3) = 3e-06
 Identities = 21/22 (95%), Positives = 22/22 (100%)
 Frame = -3

Query: 467 PLCWLGEEGISMAKDSIQPQVP 402
           PLCWLGEEGIS+AKDSIQPQVP
Sbjct: 25  PLCWLGEEGISIAKDSIQPQVP 46



 Score = 28.1 bits (61), Expect(3) = 3e-06
 Identities = 11/13 (84%), Positives = 11/13 (84%)
 Frame = -2

Query: 402 LRLPCYSFTSVED 364
           LRLPCY FT VED
Sbjct: 47  LRLPCYDFTPVED 59



 Score = 20.8 bits (42), Expect(3) = 3e-06
 Identities = 7/11 (63%), Positives = 10/11 (90%)
 Frame = -1

Query: 499 SPAPYQWEQAT 467
           SPA +QW+QA+
Sbjct: 14  SPARHQWKQAS 24


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