BLASTX nr result

ID: Forsythia22_contig00045973 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Forsythia22_contig00045973
         (207 letters)

Database: ./nr 
           69,698,275 sequences; 24,982,196,650 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CDP00129.1| unnamed protein product [Coffea canephora]             61   3e-07
ref|XP_007009270.1| AT-hook protein of GA feedback 2 [Theobroma ...    59   1e-06
ref|XP_002524209.1| ESC, putative [Ricinus communis] gi|22353648...    59   1e-06
ref|XP_010658536.1| PREDICTED: putative DNA-binding protein ESCA...    58   3e-06
emb|CBI31637.3| unnamed protein product [Vitis vinifera]               58   3e-06

>emb|CDP00129.1| unnamed protein product [Coffea canephora]
          Length = 310

 Score = 60.8 bits (146), Expect = 3e-07
 Identities = 29/54 (53%), Positives = 38/54 (70%), Gaps = 5/54 (9%)
 Frame = +1

Query: 61  MANRWWAENAVMNPMSLPS--GPSLHLRN---PDEDQSTGLNRRGPRRREQEFM 207
           MANRWWA N  MNP+  PS   PSLHLRN    +++ + GLNR G +RR+Q+F+
Sbjct: 1   MANRWWAGNVAMNPLVSPSTPSPSLHLRNSATAEDENAAGLNRLGQQRRDQDFL 54


>ref|XP_007009270.1| AT-hook protein of GA feedback 2 [Theobroma cacao]
           gi|508726183|gb|EOY18080.1| AT-hook protein of GA
           feedback 2 [Theobroma cacao]
          Length = 339

 Score = 59.3 bits (142), Expect = 1e-06
 Identities = 30/50 (60%), Positives = 34/50 (68%), Gaps = 2/50 (4%)
 Frame = +1

Query: 61  MANRWWAENAVMNPM-SLPSGPSLHLRNP-DEDQSTGLNRRGPRRREQEF 204
           MANRWWA N  M  + S+ S PSLHLRNP +ED    LNR GPRR  Q+F
Sbjct: 1   MANRWWAGNVAMRGVDSIASTPSLHLRNPSEEDHRIALNRLGPRREHQDF 50


>ref|XP_002524209.1| ESC, putative [Ricinus communis] gi|223536486|gb|EEF38133.1| ESC,
           putative [Ricinus communis]
          Length = 342

 Score = 58.9 bits (141), Expect = 1e-06
 Identities = 27/48 (56%), Positives = 34/48 (70%), Gaps = 1/48 (2%)
 Frame = +1

Query: 61  MANRWWAENAVMNPMS-LPSGPSLHLRNPDEDQSTGLNRRGPRRREQE 201
           MANRWWA N  M  +  + S  SLHLRNP+E ++ GLNR GPRR +Q+
Sbjct: 1   MANRWWAGNVAMRGVDPISSASSLHLRNPEEVEAIGLNRLGPRREQQD 48


>ref|XP_010658536.1| PREDICTED: putative DNA-binding protein ESCAROLA [Vitis vinifera]
          Length = 327

 Score = 57.8 bits (138), Expect = 3e-06
 Identities = 33/50 (66%), Positives = 37/50 (74%), Gaps = 1/50 (2%)
 Frame = +1

Query: 61  MANRWWAENAVM-NPMSLPSGPSLHLRNPDEDQSTGLNRRGPRRREQEFM 207
           M +RWWA N  M +PMS  S PSLHLRN ++DQ  GLNR GP RREQEFM
Sbjct: 1   MTHRWWAGNVAMRDPMS--SAPSLHLRNTEDDQG-GLNRLGP-RREQEFM 46


>emb|CBI31637.3| unnamed protein product [Vitis vinifera]
          Length = 300

 Score = 57.8 bits (138), Expect = 3e-06
 Identities = 33/50 (66%), Positives = 37/50 (74%), Gaps = 1/50 (2%)
 Frame = +1

Query: 61  MANRWWAENAVM-NPMSLPSGPSLHLRNPDEDQSTGLNRRGPRRREQEFM 207
           M +RWWA N  M +PMS  S PSLHLRN ++DQ  GLNR GP RREQEFM
Sbjct: 1   MTHRWWAGNVAMRDPMS--SAPSLHLRNTEDDQG-GLNRLGP-RREQEFM 46


Top