BLASTX nr result

ID: Forsythia22_contig00045404 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Forsythia22_contig00045404
         (570 letters)

Database: ./nr 
           69,698,275 sequences; 24,982,196,650 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|YP_009108266.1| hypothetical hloroplast RF21 [Cistanche phel...    58   3e-06
ref|YP_007890282.1| Ycf2 protein (chloroplast) [Cistanche desert...    58   3e-06
ref|YP_009048175.1| Ycf2 (chloroplast) [Primula poissonii] gi|66...    57   7e-06
gb|ADD30882.1| putative RF2 protein (chloroplast) [Ehretia acumi...    57   7e-06

>ref|YP_009108266.1| hypothetical hloroplast RF21 [Cistanche phelypaea]
           gi|725676280|ref|YP_009108271.1| hypothetical
           chloroplast RF21 [Cistanche phelypaea]
           gi|700576455|emb|CDH98456.1| hypothetical hloroplast
           RF21 [Cistanche phelypaea] gi|700576460|emb|CDH98466.1|
           hypothetical chloroplast RF21 [Cistanche phelypaea]
          Length = 2319

 Score = 58.2 bits (139), Expect = 3e-06
 Identities = 24/27 (88%), Positives = 25/27 (92%)
 Frame = -2

Query: 455 KSMNWDLDAYRYKWSNGSKNFQEHLGD 375
           +SMNWD DAYRYKWSNGSKNFQEHL D
Sbjct: 801 RSMNWDPDAYRYKWSNGSKNFQEHLED 827


>ref|YP_007890282.1| Ycf2 protein (chloroplast) [Cistanche deserticola]
           gi|501595135|ref|YP_007890290.1| Ycf2 protein
           (chloroplast) [Cistanche deserticola]
           gi|429536995|gb|AFZ99566.1| Ycf2 protein (chloroplast)
           [Cistanche deserticola] gi|429537003|gb|AFZ99574.1| Ycf2
           protein (chloroplast) [Cistanche deserticola]
          Length = 2257

 Score = 58.2 bits (139), Expect = 3e-06
 Identities = 24/27 (88%), Positives = 25/27 (92%)
 Frame = -2

Query: 455 KSMNWDLDAYRYKWSNGSKNFQEHLGD 375
           +SMNWD DAYRYKWSNGSKNFQEHL D
Sbjct: 793 RSMNWDPDAYRYKWSNGSKNFQEHLED 819


>ref|YP_009048175.1| Ycf2 (chloroplast) [Primula poissonii]
           gi|669100246|ref|YP_009048153.1| Ycf2 (chloroplast)
           [Primula poissonii] gi|573015147|gb|AHF71729.1| Ycf2
           (chloroplast) [Primula poissonii]
           gi|573015232|gb|AHF71814.1| Ycf2 (chloroplast) [Primula
           poissonii]
          Length = 2279

 Score = 56.6 bits (135), Expect = 7e-06
 Identities = 23/25 (92%), Positives = 24/25 (96%)
 Frame = -2

Query: 455 KSMNWDLDAYRYKWSNGSKNFQEHL 381
           +SMNWD DAYRYKWSNGSKNFQEHL
Sbjct: 800 RSMNWDPDAYRYKWSNGSKNFQEHL 824


>gb|ADD30882.1| putative RF2 protein (chloroplast) [Ehretia acuminata]
           gi|340806978|gb|AEK71601.1| hypothetical chloroplast RF2
           [Ehretia acuminata]
          Length = 2284

 Score = 56.6 bits (135), Expect = 7e-06
 Identities = 23/25 (92%), Positives = 24/25 (96%)
 Frame = -2

Query: 455 KSMNWDLDAYRYKWSNGSKNFQEHL 381
           +SMNWD DAYRYKWSNGSKNFQEHL
Sbjct: 803 RSMNWDPDAYRYKWSNGSKNFQEHL 827


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