BLASTX nr result
ID: Forsythia22_contig00044521
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Forsythia22_contig00044521 (627 letters) Database: ./nr 69,698,275 sequences; 24,982,196,650 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value dbj|BAJ95890.1| predicted protein [Hordeum vulgare subsp. vulgare] 49 1e-06 gb|EMS62958.1| Putative SWI/SNF-related matrix-associated actin-... 48 6e-06 gb|EMS50104.1| Retrovirus-related Pol polyprotein LINE-1 [Tritic... 48 1e-05 >dbj|BAJ95890.1| predicted protein [Hordeum vulgare subsp. vulgare] Length = 210 Score = 49.3 bits (116), Expect(2) = 1e-06 Identities = 30/81 (37%), Positives = 40/81 (49%), Gaps = 2/81 (2%) Frame = -3 Query: 547 KGQNANKKNVSEMRMLRWICGYTKID--KK*DYVQTSXXXXXXXXXXGMILRWLGYSVCR 374 K ++ + V+EMRMLRWICG+T+ D + D + LRW G+ R Sbjct: 116 KRRHIQQLGVAEMRMLRWICGHTRKDRVRNDDIRERLGVAPIEEKLVQHRLRWFGHIQRR 175 Query: 373 SIEAPVHGINAISIEQVRRGR 311 EAPVH E V+RGR Sbjct: 176 PPEAPVHSGRIKRAENVKRGR 196 Score = 30.0 bits (66), Expect(2) = 1e-06 Identities = 10/23 (43%), Positives = 18/23 (78%) Frame = -1 Query: 624 RKILKRLKGQFYRTVVIAVMFYG 556 +++L++LKG+FYRT + + YG Sbjct: 87 KRVLQKLKGRFYRTAIRPAILYG 109 >gb|EMS62958.1| Putative SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 3-like 1 [Triticum urartu] Length = 1028 Score = 47.8 bits (112), Expect(2) = 6e-06 Identities = 29/81 (35%), Positives = 39/81 (48%), Gaps = 2/81 (2%) Frame = -3 Query: 547 KGQNANKKNVSEMRMLRWICGYTKID--KK*DYVQTSXXXXXXXXXXGMILRWLGYSVCR 374 K ++ + V+EMRMLRW+CG+T+ D + D LRW G+ R Sbjct: 647 KRRHVQQLGVAEMRMLRWMCGHTRKDRVRNDDIRDRVGVAPIEEKLVQHRLRWFGHIQRR 706 Query: 373 SIEAPVHGINAISIEQVRRGR 311 EAPVH E V+RGR Sbjct: 707 PPEAPVHSGRLKRAENVKRGR 727 Score = 29.3 bits (64), Expect(2) = 6e-06 Identities = 11/23 (47%), Positives = 17/23 (73%) Frame = -1 Query: 624 RKILKRLKGQFYRTVVIAVMFYG 556 +++ ++LKG+FYRT V M YG Sbjct: 618 KRVPQKLKGKFYRTAVRPAMLYG 640 >gb|EMS50104.1| Retrovirus-related Pol polyprotein LINE-1 [Triticum urartu] Length = 3154 Score = 47.8 bits (112), Expect(2) = 1e-05 Identities = 29/81 (35%), Positives = 39/81 (48%), Gaps = 2/81 (2%) Frame = -3 Query: 547 KGQNANKKNVSEMRMLRWICGYTKID--KK*DYVQTSXXXXXXXXXXGMILRWLGYSVCR 374 K ++ + V+EMRMLRW+CG+T+ D + D LRW G+ R Sbjct: 2361 KRRHVQQLGVAEMRMLRWMCGHTRKDRVRNDDIRDRVGVAPIEEKLVQHRLRWFGHIQRR 2420 Query: 373 SIEAPVHGINAISIEQVRRGR 311 EAPVH E V+RGR Sbjct: 2421 PPEAPVHSGRLKRAENVKRGR 2441 Score = 28.5 bits (62), Expect(2) = 1e-05 Identities = 11/23 (47%), Positives = 16/23 (69%) Frame = -1 Query: 624 RKILKRLKGQFYRTVVIAVMFYG 556 +K+ ++L G+FYRT V M YG Sbjct: 2332 KKVPQKLNGKFYRTAVRPAMLYG 2354