BLASTX nr result

ID: Forsythia22_contig00044521 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Forsythia22_contig00044521
         (627 letters)

Database: ./nr 
           69,698,275 sequences; 24,982,196,650 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

dbj|BAJ95890.1| predicted protein [Hordeum vulgare subsp. vulgare]     49   1e-06
gb|EMS62958.1| Putative SWI/SNF-related matrix-associated actin-...    48   6e-06
gb|EMS50104.1| Retrovirus-related Pol polyprotein LINE-1 [Tritic...    48   1e-05

>dbj|BAJ95890.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 210

 Score = 49.3 bits (116), Expect(2) = 1e-06
 Identities = 30/81 (37%), Positives = 40/81 (49%), Gaps = 2/81 (2%)
 Frame = -3

Query: 547 KGQNANKKNVSEMRMLRWICGYTKID--KK*DYVQTSXXXXXXXXXXGMILRWLGYSVCR 374
           K ++  +  V+EMRMLRWICG+T+ D  +  D  +               LRW G+   R
Sbjct: 116 KRRHIQQLGVAEMRMLRWICGHTRKDRVRNDDIRERLGVAPIEEKLVQHRLRWFGHIQRR 175

Query: 373 SIEAPVHGINAISIEQVRRGR 311
             EAPVH       E V+RGR
Sbjct: 176 PPEAPVHSGRIKRAENVKRGR 196



 Score = 30.0 bits (66), Expect(2) = 1e-06
 Identities = 10/23 (43%), Positives = 18/23 (78%)
 Frame = -1

Query: 624 RKILKRLKGQFYRTVVIAVMFYG 556
           +++L++LKG+FYRT +   + YG
Sbjct: 87  KRVLQKLKGRFYRTAIRPAILYG 109


>gb|EMS62958.1| Putative SWI/SNF-related matrix-associated actin-dependent
           regulator of chromatin subfamily A member 3-like 1
           [Triticum urartu]
          Length = 1028

 Score = 47.8 bits (112), Expect(2) = 6e-06
 Identities = 29/81 (35%), Positives = 39/81 (48%), Gaps = 2/81 (2%)
 Frame = -3

Query: 547 KGQNANKKNVSEMRMLRWICGYTKID--KK*DYVQTSXXXXXXXXXXGMILRWLGYSVCR 374
           K ++  +  V+EMRMLRW+CG+T+ D  +  D                  LRW G+   R
Sbjct: 647 KRRHVQQLGVAEMRMLRWMCGHTRKDRVRNDDIRDRVGVAPIEEKLVQHRLRWFGHIQRR 706

Query: 373 SIEAPVHGINAISIEQVRRGR 311
             EAPVH       E V+RGR
Sbjct: 707 PPEAPVHSGRLKRAENVKRGR 727



 Score = 29.3 bits (64), Expect(2) = 6e-06
 Identities = 11/23 (47%), Positives = 17/23 (73%)
 Frame = -1

Query: 624 RKILKRLKGQFYRTVVIAVMFYG 556
           +++ ++LKG+FYRT V   M YG
Sbjct: 618 KRVPQKLKGKFYRTAVRPAMLYG 640


>gb|EMS50104.1| Retrovirus-related Pol polyprotein LINE-1 [Triticum urartu]
          Length = 3154

 Score = 47.8 bits (112), Expect(2) = 1e-05
 Identities = 29/81 (35%), Positives = 39/81 (48%), Gaps = 2/81 (2%)
 Frame = -3

Query: 547  KGQNANKKNVSEMRMLRWICGYTKID--KK*DYVQTSXXXXXXXXXXGMILRWLGYSVCR 374
            K ++  +  V+EMRMLRW+CG+T+ D  +  D                  LRW G+   R
Sbjct: 2361 KRRHVQQLGVAEMRMLRWMCGHTRKDRVRNDDIRDRVGVAPIEEKLVQHRLRWFGHIQRR 2420

Query: 373  SIEAPVHGINAISIEQVRRGR 311
              EAPVH       E V+RGR
Sbjct: 2421 PPEAPVHSGRLKRAENVKRGR 2441



 Score = 28.5 bits (62), Expect(2) = 1e-05
 Identities = 11/23 (47%), Positives = 16/23 (69%)
 Frame = -1

Query: 624  RKILKRLKGQFYRTVVIAVMFYG 556
            +K+ ++L G+FYRT V   M YG
Sbjct: 2332 KKVPQKLNGKFYRTAVRPAMLYG 2354


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