BLASTX nr result
ID: Forsythia22_contig00042026
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Forsythia22_contig00042026
(324 letters)
Database: ./nr
69,698,275 sequences; 24,982,196,650 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|AEK78268.1| hypothetical chloroplast RF2 [Rhabdodendron amazo... 60 6e-07
ref|YP_009155256.1| Ycf2 (plastid) [Pastinaca pimpinellifolia] g... 59 1e-06
gb|ADD30888.1| putative RF2 protein (chloroplast) [Phoradendron ... 59 1e-06
gb|AEZ48750.1| hypothetical chloroplast RF2, partial [Potarophyt... 59 1e-06
gb|AEK71879.1| hypothetical chloroplast RF2 [Myrothamnus flabell... 59 1e-06
ref|YP_740161.1| hypothetical protein RF2 [Daucus carota] gi|114... 59 1e-06
ref|YP_009114912.1| hypothetical chloroplast RF21 [Thalictrum co... 59 2e-06
prf||1211235CA ORF 1708 58 2e-06
ref|YP_009155471.1| Ycf2 (chloroplast) [Panax quinquefolius] gi|... 58 2e-06
ref|YP_009155338.1| hypothetical chloroplast RF21 (plastid) [Ses... 58 2e-06
gb|AKF02179.1| hypothetical chloroplast RF21 (chloroplast) [Oeno... 58 2e-06
gb|AKF02033.1| hypothetical chloroplast RF21 (chloroplast) [Mani... 58 2e-06
gb|AKF01957.1| hypothetical chloroplast RF21 (chloroplast) [Leop... 58 2e-06
gb|AKF01829.1| hypothetical chloroplast RF21 (chloroplast) [Iria... 58 2e-06
gb|AKF01810.1| hypothetical chloroplast RF21 (chloroplast) [Iria... 58 2e-06
gb|AKF01745.1| hypothetical chloroplast RF21 (chloroplast) [Hydr... 58 2e-06
gb|AKF01666.1| hypothetical chloroplast RF21 (chloroplast) [Hete... 58 2e-06
gb|AKF01648.1| hypothetical chloroplast RF21 (chloroplast) [Hete... 58 2e-06
gb|AKF01572.1| hypothetical chloroplast RF21 (chloroplast) [Geon... 58 2e-06
gb|AKF01489.1| hypothetical chloroplast RF21 (chloroplast) [Dyps... 58 2e-06
>gb|AEK78268.1| hypothetical chloroplast RF2 [Rhabdodendron amazonicum]
Length = 2288
Score = 60.1 bits (144), Expect = 6e-07
Identities = 26/27 (96%), Positives = 27/27 (100%)
Frame = +1
Query: 49 RLNGDWIDDKIESWVANSDSIDDEERE 129
R+NGDWIDDKIESWVANSDSIDDEERE
Sbjct: 1503 RVNGDWIDDKIESWVANSDSIDDEERE 1529
>ref|YP_009155256.1| Ycf2 (plastid) [Pastinaca pimpinellifolia]
gi|700746286|gb|AIU99065.1| Ycf2 (plastid) [Pastinaca
pimpinellifolia]
Length = 2101
Score = 58.9 bits (141), Expect = 1e-06
Identities = 32/55 (58%), Positives = 36/55 (65%), Gaps = 1/55 (1%)
Frame = +1
Query: 52 LNGDWIDDKIESWVANSDSIDDEERE-LDQLINKLNRAFISQHSM*VQSKPHLGQ 213
+NGDWIDDKIESWVANSDSIDDEERE L QL I Q + + HL +
Sbjct: 1317 VNGDWIDDKIESWVANSDSIDDEEREFLVQLSTLTTEKRIDQILLSLTHSDHLSK 1371
>gb|ADD30888.1| putative RF2 protein (chloroplast) [Phoradendron serotinum]
gi|340807002|gb|AEK71622.1| hypothetical chloroplast RF2
[Phoradendron serotinum]
Length = 2292
Score = 58.9 bits (141), Expect = 1e-06
Identities = 29/37 (78%), Positives = 32/37 (86%), Gaps = 3/37 (8%)
Frame = +1
Query: 31 DHSNLIR---LNGDWIDDKIESWVANSDSIDDEEREL 132
D +LIR LNGDW+DDKIESWVANSDS+DDEEREL
Sbjct: 1476 DLYSLIRKKNLNGDWMDDKIESWVANSDSMDDEEREL 1512
>gb|AEZ48750.1| hypothetical chloroplast RF2, partial [Potarophytum riparium]
Length = 2274
Score = 58.9 bits (141), Expect = 1e-06
Identities = 25/27 (92%), Positives = 27/27 (100%)
Frame = +1
Query: 49 RLNGDWIDDKIESWVANSDSIDDEERE 129
++NGDWIDDKIESWVANSDSIDDEERE
Sbjct: 1482 KVNGDWIDDKIESWVANSDSIDDEERE 1508
>gb|AEK71879.1| hypothetical chloroplast RF2 [Myrothamnus flabellifolia]
Length = 2299
Score = 58.9 bits (141), Expect = 1e-06
Identities = 25/27 (92%), Positives = 27/27 (100%)
Frame = +1
Query: 49 RLNGDWIDDKIESWVANSDSIDDEERE 129
++NGDWIDDKIESWVANSDSIDDEERE
Sbjct: 1487 KVNGDWIDDKIESWVANSDSIDDEERE 1513
>ref|YP_740161.1| hypothetical protein RF2 [Daucus carota]
gi|114107195|ref|YP_740178.1| hypothetical protein RF2
[Daucus carota] gi|122246291|sp|Q0G9Q1.1|YCF2_DAUCA
RecName: Full=Protein Ycf2 (chloroplast) [Daucus carota]
gi|113200951|gb|ABI32467.1| hypothetical protein RF2
[Daucus carota] gi|113200970|gb|ABI32486.1| hypothetical
protein RF2 [Daucus carota]
Length = 2091
Score = 58.9 bits (141), Expect = 1e-06
Identities = 32/55 (58%), Positives = 36/55 (65%), Gaps = 1/55 (1%)
Frame = +1
Query: 52 LNGDWIDDKIESWVANSDSIDDEERE-LDQLINKLNRAFISQHSM*VQSKPHLGQ 213
+NGDWIDDKIESWVANSDSIDDEERE L QL I Q + + HL +
Sbjct: 1291 VNGDWIDDKIESWVANSDSIDDEEREFLVQLSTLTTEKRIDQILLSLTHSDHLSK 1345
>ref|YP_009114912.1| hypothetical chloroplast RF21 [Thalictrum coreanum]
gi|746948530|ref|YP_009114928.1| hypothetical chloroplast
RF21 [Thalictrum coreanum] gi|721136349|gb|AIX03560.1|
hypothetical chloroplast RF21 [Thalictrum coreanum]
gi|721136365|gb|AIX03576.1| hypothetical chloroplast RF21
[Thalictrum coreanum]
Length = 2267
Score = 58.5 bits (140), Expect = 2e-06
Identities = 27/36 (75%), Positives = 29/36 (80%)
Frame = +1
Query: 52 LNGDWIDDKIESWVANSDSIDDEERELDQLINKLNR 159
+NGDWIDDKIESWVANSDSIDDEERE + L R
Sbjct: 1465 VNGDWIDDKIESWVANSDSIDDEEREFLVQFSTLTR 1500
>prf||1211235CA ORF 1708
Length = 1000
Score = 58.2 bits (139), Expect = 2e-06
Identities = 25/26 (96%), Positives = 26/26 (100%)
Frame = +1
Query: 52 LNGDWIDDKIESWVANSDSIDDEERE 129
+NGDWIDDKIESWVANSDSIDDEERE
Sbjct: 918 VNGDWIDDKIESWVANSDSIDDEERE 943
>ref|YP_009155471.1| Ycf2 (chloroplast) [Panax quinquefolius]
gi|884997706|ref|YP_009155489.1| Ycf2 (chloroplast)
[Panax quinquefolius] gi|744671739|gb|AJC99531.1| Ycf2
(chloroplast) [Panax quinquefolius]
gi|744671757|gb|AJC99549.1| Ycf2 (chloroplast) [Panax
quinquefolius]
Length = 2110
Score = 58.2 bits (139), Expect = 2e-06
Identities = 25/26 (96%), Positives = 26/26 (100%)
Frame = +1
Query: 52 LNGDWIDDKIESWVANSDSIDDEERE 129
+NGDWIDDKIESWVANSDSIDDEERE
Sbjct: 1301 VNGDWIDDKIESWVANSDSIDDEERE 1326
>ref|YP_009155338.1| hypothetical chloroplast RF21 (plastid) [Seseli montanum]
gi|700746389|gb|AIU99147.1| hypothetical chloroplast RF21
(plastid) [Seseli montanum]
Length = 2093
Score = 58.2 bits (139), Expect = 2e-06
Identities = 25/26 (96%), Positives = 26/26 (100%)
Frame = +1
Query: 52 LNGDWIDDKIESWVANSDSIDDEERE 129
+NGDWIDDKIESWVANSDSIDDEERE
Sbjct: 1309 VNGDWIDDKIESWVANSDSIDDEERE 1334
>gb|AKF02179.1| hypothetical chloroplast RF21 (chloroplast) [Oenocarpus minor]
Length = 2292
Score = 58.2 bits (139), Expect = 2e-06
Identities = 25/26 (96%), Positives = 26/26 (100%)
Frame = +1
Query: 52 LNGDWIDDKIESWVANSDSIDDEERE 129
+NGDWIDDKIESWVANSDSIDDEERE
Sbjct: 1490 VNGDWIDDKIESWVANSDSIDDEERE 1515
>gb|AKF02033.1| hypothetical chloroplast RF21 (chloroplast) [Manicaria saccifera]
gi|816379420|gb|AKF02053.1| hypothetical chloroplast RF21
(chloroplast) [Manicaria saccifera]
Length = 2294
Score = 58.2 bits (139), Expect = 2e-06
Identities = 25/26 (96%), Positives = 26/26 (100%)
Frame = +1
Query: 52 LNGDWIDDKIESWVANSDSIDDEERE 129
+NGDWIDDKIESWVANSDSIDDEERE
Sbjct: 1492 VNGDWIDDKIESWVANSDSIDDEERE 1517
>gb|AKF01957.1| hypothetical chloroplast RF21 (chloroplast) [Leopoldinia pulchra]
Length = 2294
Score = 58.2 bits (139), Expect = 2e-06
Identities = 25/26 (96%), Positives = 26/26 (100%)
Frame = +1
Query: 52 LNGDWIDDKIESWVANSDSIDDEERE 129
+NGDWIDDKIESWVANSDSIDDEERE
Sbjct: 1492 VNGDWIDDKIESWVANSDSIDDEERE 1517
>gb|AKF01829.1| hypothetical chloroplast RF21 (chloroplast) [Iriartea deltoidea]
Length = 2293
Score = 58.2 bits (139), Expect = 2e-06
Identities = 25/26 (96%), Positives = 26/26 (100%)
Frame = +1
Query: 52 LNGDWIDDKIESWVANSDSIDDEERE 129
+NGDWIDDKIESWVANSDSIDDEERE
Sbjct: 1499 VNGDWIDDKIESWVANSDSIDDEERE 1524
>gb|AKF01810.1| hypothetical chloroplast RF21 (chloroplast) [Iriartea deltoidea]
Length = 2286
Score = 58.2 bits (139), Expect = 2e-06
Identities = 25/26 (96%), Positives = 26/26 (100%)
Frame = +1
Query: 52 LNGDWIDDKIESWVANSDSIDDEERE 129
+NGDWIDDKIESWVANSDSIDDEERE
Sbjct: 1492 VNGDWIDDKIESWVANSDSIDDEERE 1517
>gb|AKF01745.1| hypothetical chloroplast RF21 (chloroplast) [Hydriastele microspadix]
Length = 2292
Score = 58.2 bits (139), Expect = 2e-06
Identities = 25/26 (96%), Positives = 26/26 (100%)
Frame = +1
Query: 52 LNGDWIDDKIESWVANSDSIDDEERE 129
+NGDWIDDKIESWVANSDSIDDEERE
Sbjct: 1492 VNGDWIDDKIESWVANSDSIDDEERE 1517
>gb|AKF01666.1| hypothetical chloroplast RF21 (chloroplast) [Heterospathe
cagayanensis]
Length = 2290
Score = 58.2 bits (139), Expect = 2e-06
Identities = 25/26 (96%), Positives = 26/26 (100%)
Frame = +1
Query: 52 LNGDWIDDKIESWVANSDSIDDEERE 129
+NGDWIDDKIESWVANSDSIDDEERE
Sbjct: 1496 VNGDWIDDKIESWVANSDSIDDEERE 1521
>gb|AKF01648.1| hypothetical chloroplast RF21 (chloroplast) [Heterospathe
cagayanensis]
Length = 2290
Score = 58.2 bits (139), Expect = 2e-06
Identities = 25/26 (96%), Positives = 26/26 (100%)
Frame = +1
Query: 52 LNGDWIDDKIESWVANSDSIDDEERE 129
+NGDWIDDKIESWVANSDSIDDEERE
Sbjct: 1496 VNGDWIDDKIESWVANSDSIDDEERE 1521
>gb|AKF01572.1| hypothetical chloroplast RF21 (chloroplast) [Geonoma undata subsp.
dussiana]
Length = 2265
Score = 58.2 bits (139), Expect = 2e-06
Identities = 25/26 (96%), Positives = 26/26 (100%)
Frame = +1
Query: 52 LNGDWIDDKIESWVANSDSIDDEERE 129
+NGDWIDDKIESWVANSDSIDDEERE
Sbjct: 1473 VNGDWIDDKIESWVANSDSIDDEERE 1498
>gb|AKF01489.1| hypothetical chloroplast RF21 (chloroplast) [Dypsis decaryi]
gi|816378869|gb|AKF01509.1| hypothetical chloroplast RF21
(chloroplast) [Dypsis decaryi]
Length = 2286
Score = 58.2 bits (139), Expect = 2e-06
Identities = 25/26 (96%), Positives = 26/26 (100%)
Frame = +1
Query: 52 LNGDWIDDKIESWVANSDSIDDEERE 129
+NGDWIDDKIESWVANSDSIDDEERE
Sbjct: 1492 VNGDWIDDKIESWVANSDSIDDEERE 1517