BLASTX nr result
ID: Forsythia22_contig00041870
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Forsythia22_contig00041870
(429 letters)
Database: ./nr
69,698,275 sequences; 24,982,196,650 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|YP_009110593.1| RNA polymerase beta' chain (chloroplast) [He... 119 6e-25
ref|YP_003359350.2| RNA polymerase beta I subunit (chloroplast) ... 119 6e-25
ref|YP_004563995.1| RNA polymerase beta' chain [Olea woodiana su... 119 6e-25
ref|YP_004563772.1| RNA polymerase beta' chain [Olea europaea su... 119 6e-25
ref|YP_004376412.1| RNA polymerase beta' chain [Olea europaea su... 119 6e-25
gb|ADD72080.1| RNA polymerase beta subunit [Olea europaea] 119 6e-25
gb|AGW04432.1| RNA polymerase beta' subunit [Astephanus triflorus] 119 1e-24
ref|YP_009115886.1| RNA polymerase beta [Scrophularia takesimens... 118 1e-24
gb|ADD31164.1| RNA polymerase beta' subunit protein (chloroplast... 118 1e-24
gb|AGL45327.1| RpoC1 (chloroplast) [Sesamum indicum] 118 1e-24
ref|YP_004935657.1| rpoC1 gene product (chloroplast) [Sesamum in... 118 1e-24
ref|YP_004940501.1| rpoC1 gene product (chloroplast) [Boea hygro... 117 3e-24
ref|YP_008964858.1| RNA polymerase beta' subunit (chloroplast) [... 117 4e-24
gb|ADD31162.1| RNA polymerase beta' subunit protein (chloroplast... 116 5e-24
ref|YP_009117212.1| RNA polymerase beta (chloroplast) [Premna mi... 115 9e-24
gb|AIW05935.1| RNA polymerase beta' subunit [Wrightia natalensis] 114 2e-23
gb|AIW05850.1| RNA polymerase beta' subunit [Rhabdadenia biflora] 114 2e-23
ref|YP_009108750.1| RNA polymerase beta' subunit [Oncinotis tenu... 114 2e-23
gb|AIW05426.1| RNA polymerase beta' subunit [Neobracea bahamensis] 114 2e-23
ref|YP_009108665.1| RNA polymerase beta' subunit [Nerium oleande... 114 2e-23
>ref|YP_009110593.1| RNA polymerase beta' chain (chloroplast) [Hesperelaea palmeri]
gi|725798277|emb|CED79753.1| RNA polymerase beta' chain
(chloroplast) [Hesperelaea palmeri]
Length = 690
Score = 119 bits (299), Expect = 6e-25
Identities = 58/60 (96%), Positives = 59/60 (98%)
Frame = -1
Query: 381 YESLGTYYEIYGHYLIVRSIKKEILFIYIRTTVGHISLYREIEEAIQGFSQACSYGT*LS 202
YESLGTYYEIYGHYLIVRSIKKEILFIYIRTTVGHISLYREIEEA+QGFSQACSYGT LS
Sbjct: 631 YESLGTYYEIYGHYLIVRSIKKEILFIYIRTTVGHISLYREIEEAVQGFSQACSYGTELS 690
>ref|YP_003359350.2| RNA polymerase beta I subunit (chloroplast) [Olea europaea]
gi|363413082|gb|ADA69917.2| RNA polymerase beta I
subunit (chloroplast) [Olea europaea]
Length = 685
Score = 119 bits (299), Expect = 6e-25
Identities = 58/60 (96%), Positives = 59/60 (98%)
Frame = -1
Query: 381 YESLGTYYEIYGHYLIVRSIKKEILFIYIRTTVGHISLYREIEEAIQGFSQACSYGT*LS 202
YESLGTYYEIYGHYLIVRSIKKEILFIYIRTTVGHISLYREIEEA+QGFSQACSYGT LS
Sbjct: 626 YESLGTYYEIYGHYLIVRSIKKEILFIYIRTTVGHISLYREIEEAVQGFSQACSYGTELS 685
>ref|YP_004563995.1| RNA polymerase beta' chain [Olea woodiana subsp. woodiana]
gi|334084650|emb|CBS29341.1| RNA polymerase beta' chain
[Olea woodiana subsp. woodiana]
Length = 690
Score = 119 bits (299), Expect = 6e-25
Identities = 58/60 (96%), Positives = 59/60 (98%)
Frame = -1
Query: 381 YESLGTYYEIYGHYLIVRSIKKEILFIYIRTTVGHISLYREIEEAIQGFSQACSYGT*LS 202
YESLGTYYEIYGHYLIVRSIKKEILFIYIRTTVGHISLYREIEEA+QGFSQACSYGT LS
Sbjct: 631 YESLGTYYEIYGHYLIVRSIKKEILFIYIRTTVGHISLYREIEEAVQGFSQACSYGTELS 690
>ref|YP_004563772.1| RNA polymerase beta' chain [Olea europaea subsp. cuspidata]
gi|334084392|emb|CBR23820.1| RNA polymerase beta' chain
[Olea europaea subsp. cuspidata]
gi|334084941|emb|CBJ04289.1| RNA polymerase beta' chain
[Olea europaea subsp. cuspidata]
gi|334085027|emb|CBR23729.1| RNA polymerase beta' chain
[Olea europaea subsp. cuspidata]
Length = 690
Score = 119 bits (299), Expect = 6e-25
Identities = 58/60 (96%), Positives = 59/60 (98%)
Frame = -1
Query: 381 YESLGTYYEIYGHYLIVRSIKKEILFIYIRTTVGHISLYREIEEAIQGFSQACSYGT*LS 202
YESLGTYYEIYGHYLIVRSIKKEILFIYIRTTVGHISLYREIEEA+QGFSQACSYGT LS
Sbjct: 631 YESLGTYYEIYGHYLIVRSIKKEILFIYIRTTVGHISLYREIEEAVQGFSQACSYGTELS 690
>ref|YP_004376412.1| RNA polymerase beta' chain [Olea europaea subsp. europaea]
gi|334701879|ref|YP_004564488.1| RNA polymerase beta'
chain [Olea europaea subsp. maroccana]
gi|328795424|emb|CBR30305.1| RNA polymerase beta' chain
[Olea europaea subsp. europaea]
gi|334084478|emb|CBR24611.1| RNA polymerase beta' chain
[Olea europaea subsp. europaea]
gi|334084564|emb|CBR30397.1| RNA polymerase beta' chain
[Olea europaea subsp. europaea]
gi|334084855|emb|CBS29228.1| RNA polymerase beta' chain
[Olea europaea subsp. maroccana]
gi|510934395|emb|CCQ09093.1| RNA polymerase beta' chain
(chloroplast) [Olea europaea subsp. europaea]
Length = 690
Score = 119 bits (299), Expect = 6e-25
Identities = 58/60 (96%), Positives = 59/60 (98%)
Frame = -1
Query: 381 YESLGTYYEIYGHYLIVRSIKKEILFIYIRTTVGHISLYREIEEAIQGFSQACSYGT*LS 202
YESLGTYYEIYGHYLIVRSIKKEILFIYIRTTVGHISLYREIEEA+QGFSQACSYGT LS
Sbjct: 631 YESLGTYYEIYGHYLIVRSIKKEILFIYIRTTVGHISLYREIEEAVQGFSQACSYGTELS 690
>gb|ADD72080.1| RNA polymerase beta subunit [Olea europaea]
Length = 683
Score = 119 bits (299), Expect = 6e-25
Identities = 58/60 (96%), Positives = 59/60 (98%)
Frame = -1
Query: 381 YESLGTYYEIYGHYLIVRSIKKEILFIYIRTTVGHISLYREIEEAIQGFSQACSYGT*LS 202
YESLGTYYEIYGHYLIVRSIKKEILFIYIRTTVGHISLYREIEEA+QGFSQACSYGT LS
Sbjct: 624 YESLGTYYEIYGHYLIVRSIKKEILFIYIRTTVGHISLYREIEEAVQGFSQACSYGTELS 683
>gb|AGW04432.1| RNA polymerase beta' subunit [Astephanus triflorus]
Length = 685
Score = 119 bits (297), Expect = 1e-24
Identities = 59/71 (83%), Positives = 62/71 (87%), Gaps = 4/71 (5%)
Frame = -1
Query: 411 ECLIFFTENP----YESLGTYYEIYGHYLIVRSIKKEILFIYIRTTVGHISLYREIEEAI 244
+CLI E P YESLGTYYEIYGHYLIVRSIKKEILFIYIRTTVGHISLYREI+EA+
Sbjct: 615 QCLIASRETPIEVHYESLGTYYEIYGHYLIVRSIKKEILFIYIRTTVGHISLYREIDEAL 674
Query: 243 QGFSQACSYGT 211
QGFS ACSYGT
Sbjct: 675 QGFSHACSYGT 685
>ref|YP_009115886.1| RNA polymerase beta [Scrophularia takesimensis]
gi|744673730|gb|AJD00715.1| RNA polymerase beta
[Scrophularia takesimensis]
Length = 684
Score = 118 bits (296), Expect = 1e-24
Identities = 57/57 (100%), Positives = 57/57 (100%)
Frame = -1
Query: 381 YESLGTYYEIYGHYLIVRSIKKEILFIYIRTTVGHISLYREIEEAIQGFSQACSYGT 211
YESLGTYYEIYGHYLIVRSIKKEILFIYIRTTVGHISLYREIEEAIQGFSQACSYGT
Sbjct: 628 YESLGTYYEIYGHYLIVRSIKKEILFIYIRTTVGHISLYREIEEAIQGFSQACSYGT 684
>gb|ADD31164.1| RNA polymerase beta' subunit protein (chloroplast) [Ehretia
acuminata]
Length = 687
Score = 118 bits (296), Expect = 1e-24
Identities = 57/57 (100%), Positives = 57/57 (100%)
Frame = -1
Query: 381 YESLGTYYEIYGHYLIVRSIKKEILFIYIRTTVGHISLYREIEEAIQGFSQACSYGT 211
YESLGTYYEIYGHYLIVRSIKKEILFIYIRTTVGHISLYREIEEAIQGFSQACSYGT
Sbjct: 631 YESLGTYYEIYGHYLIVRSIKKEILFIYIRTTVGHISLYREIEEAIQGFSQACSYGT 687
>gb|AGL45327.1| RpoC1 (chloroplast) [Sesamum indicum]
Length = 687
Score = 118 bits (296), Expect = 1e-24
Identities = 57/57 (100%), Positives = 57/57 (100%)
Frame = -1
Query: 381 YESLGTYYEIYGHYLIVRSIKKEILFIYIRTTVGHISLYREIEEAIQGFSQACSYGT 211
YESLGTYYEIYGHYLIVRSIKKEILFIYIRTTVGHISLYREIEEAIQGFSQACSYGT
Sbjct: 631 YESLGTYYEIYGHYLIVRSIKKEILFIYIRTTVGHISLYREIEEAIQGFSQACSYGT 687
>ref|YP_004935657.1| rpoC1 gene product (chloroplast) [Sesamum indicum]
gi|347448286|gb|AEO92697.1| RNA polymerase beta' subunit
(chloroplast) [Sesamum indicum]
Length = 691
Score = 118 bits (296), Expect = 1e-24
Identities = 57/57 (100%), Positives = 57/57 (100%)
Frame = -1
Query: 381 YESLGTYYEIYGHYLIVRSIKKEILFIYIRTTVGHISLYREIEEAIQGFSQACSYGT 211
YESLGTYYEIYGHYLIVRSIKKEILFIYIRTTVGHISLYREIEEAIQGFSQACSYGT
Sbjct: 635 YESLGTYYEIYGHYLIVRSIKKEILFIYIRTTVGHISLYREIEEAIQGFSQACSYGT 691
>ref|YP_004940501.1| rpoC1 gene product (chloroplast) [Boea hygrometrica]
gi|340549398|gb|AEK53220.1| RNA polymerase beta
(chloroplast) [Boea hygrometrica]
Length = 691
Score = 117 bits (293), Expect = 3e-24
Identities = 56/57 (98%), Positives = 57/57 (100%)
Frame = -1
Query: 381 YESLGTYYEIYGHYLIVRSIKKEILFIYIRTTVGHISLYREIEEAIQGFSQACSYGT 211
YESLGTYYEIYGHYLIVRSIKKEILFIYIRTTVGHISLYREIEE+IQGFSQACSYGT
Sbjct: 635 YESLGTYYEIYGHYLIVRSIKKEILFIYIRTTVGHISLYREIEESIQGFSQACSYGT 691
>ref|YP_008964858.1| RNA polymerase beta' subunit (chloroplast) [Schwalbea americana]
gi|560176691|emb|CDJ38610.1| RNA polymerase beta'
subunit (chloroplast) [Schwalbea americana]
Length = 685
Score = 117 bits (292), Expect = 4e-24
Identities = 56/57 (98%), Positives = 57/57 (100%)
Frame = -1
Query: 381 YESLGTYYEIYGHYLIVRSIKKEILFIYIRTTVGHISLYREIEEAIQGFSQACSYGT 211
YESLGTYYEIYGHYLIVRSIKKEILFIYIR+TVGHISLYREIEEAIQGFSQACSYGT
Sbjct: 629 YESLGTYYEIYGHYLIVRSIKKEILFIYIRSTVGHISLYREIEEAIQGFSQACSYGT 685
>gb|ADD31162.1| RNA polymerase beta' subunit protein (chloroplast) [Aucuba
japonica]
Length = 687
Score = 116 bits (291), Expect = 5e-24
Identities = 56/57 (98%), Positives = 56/57 (98%)
Frame = -1
Query: 381 YESLGTYYEIYGHYLIVRSIKKEILFIYIRTTVGHISLYREIEEAIQGFSQACSYGT 211
YESLGTYYEIYGHYLIVRSIKKEILFIYIRTTVGHISLYREIEEAIQGF QACSYGT
Sbjct: 631 YESLGTYYEIYGHYLIVRSIKKEILFIYIRTTVGHISLYREIEEAIQGFCQACSYGT 687
>ref|YP_009117212.1| RNA polymerase beta (chloroplast) [Premna microphylla]
gi|748013895|gb|AJE28365.1| RNA polymerase beta
(chloroplast) [Premna microphylla]
Length = 683
Score = 115 bits (289), Expect = 9e-24
Identities = 55/57 (96%), Positives = 56/57 (98%)
Frame = -1
Query: 381 YESLGTYYEIYGHYLIVRSIKKEILFIYIRTTVGHISLYREIEEAIQGFSQACSYGT 211
YESLG YYEIYGHYLIVRSIKKEILF+YIRTTVGHISLYREIEEAIQGFSQACSYGT
Sbjct: 627 YESLGNYYEIYGHYLIVRSIKKEILFLYIRTTVGHISLYREIEEAIQGFSQACSYGT 683
>gb|AIW05935.1| RNA polymerase beta' subunit [Wrightia natalensis]
Length = 687
Score = 114 bits (286), Expect = 2e-23
Identities = 54/57 (94%), Positives = 56/57 (98%)
Frame = -1
Query: 381 YESLGTYYEIYGHYLIVRSIKKEILFIYIRTTVGHISLYREIEEAIQGFSQACSYGT 211
YESLGTYYEIYGHYLIVRSIKKEILF+YIRTTVGHISLYREI+EAIQGFS ACSYGT
Sbjct: 631 YESLGTYYEIYGHYLIVRSIKKEILFLYIRTTVGHISLYREIDEAIQGFSHACSYGT 687
>gb|AIW05850.1| RNA polymerase beta' subunit [Rhabdadenia biflora]
Length = 687
Score = 114 bits (286), Expect = 2e-23
Identities = 54/57 (94%), Positives = 56/57 (98%)
Frame = -1
Query: 381 YESLGTYYEIYGHYLIVRSIKKEILFIYIRTTVGHISLYREIEEAIQGFSQACSYGT 211
YESLGTYYEIYGHYLIVRSIKKEILFIYIRTTVGHISLYREI+EA+QGFS ACSYGT
Sbjct: 631 YESLGTYYEIYGHYLIVRSIKKEILFIYIRTTVGHISLYREIDEALQGFSHACSYGT 687
>ref|YP_009108750.1| RNA polymerase beta' subunit [Oncinotis tenuiloba]
gi|702075715|gb|AIW05596.1| RNA polymerase beta' subunit
[Oncinotis tenuiloba]
Length = 687
Score = 114 bits (286), Expect = 2e-23
Identities = 54/57 (94%), Positives = 56/57 (98%)
Frame = -1
Query: 381 YESLGTYYEIYGHYLIVRSIKKEILFIYIRTTVGHISLYREIEEAIQGFSQACSYGT 211
YESLGTYYEIYGHYLIVRSIKKEILFIYIRTTVGHISLYREI+EA+QGFS ACSYGT
Sbjct: 631 YESLGTYYEIYGHYLIVRSIKKEILFIYIRTTVGHISLYREIDEALQGFSHACSYGT 687
>gb|AIW05426.1| RNA polymerase beta' subunit [Neobracea bahamensis]
Length = 679
Score = 114 bits (286), Expect = 2e-23
Identities = 54/57 (94%), Positives = 56/57 (98%)
Frame = -1
Query: 381 YESLGTYYEIYGHYLIVRSIKKEILFIYIRTTVGHISLYREIEEAIQGFSQACSYGT 211
YESLGTYYEIYGHYLIVRSIKKEILFIYIRTTVGHISLYREI+EA+QGFS ACSYGT
Sbjct: 623 YESLGTYYEIYGHYLIVRSIKKEILFIYIRTTVGHISLYREIDEALQGFSHACSYGT 679
>ref|YP_009108665.1| RNA polymerase beta' subunit [Nerium oleander]
gi|290489570|gb|ADD31169.1| RNA polymerase beta' subunit
protein (chloroplast) [Nerium oleander]
gi|702075629|gb|AIW05511.1| RNA polymerase beta' subunit
[Nerium oleander]
Length = 687
Score = 114 bits (286), Expect = 2e-23
Identities = 54/57 (94%), Positives = 56/57 (98%)
Frame = -1
Query: 381 YESLGTYYEIYGHYLIVRSIKKEILFIYIRTTVGHISLYREIEEAIQGFSQACSYGT 211
YESLGTYYEIYGHYLIVRSIKKEILFIYIRTTVGHISLYREI+EA+QGFS ACSYGT
Sbjct: 631 YESLGTYYEIYGHYLIVRSIKKEILFIYIRTTVGHISLYREIDEALQGFSHACSYGT 687