BLASTX nr result

ID: Forsythia22_contig00041021 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Forsythia22_contig00041021
         (283 letters)

Database: ./nr 
           69,698,275 sequences; 24,982,196,650 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

dbj|BAD34493.1| Gag-Pol [Ipomoea batatas]                              71   1e-21
gb|AFB73911.1| polyprotein [Citrus sinensis]                           72   4e-21
gb|AFB73912.1| polyprotein [Citrus sinensis]                           70   2e-20
gb|ACL97387.1| Gag-Pol polyprotein [Lotus japonicus]                   70   3e-20
sp|P10978.1|POLX_TOBAC RecName: Full=Retrovirus-related Pol poly...    65   5e-20
gb|ABG22119.1| polyprotein [Cynara cardunculus var. scolymus]          65   9e-20
gb|AAW22873.1| putative polyprotein [Solanum lycopersicum]             63   6e-19
gb|ABG22123.1| polyprotein [Prunus avium]                              62   2e-18
emb|CAN83951.1| hypothetical protein VITISV_043907 [Vitis vinifera]    61   3e-18
emb|CAN65504.1| hypothetical protein VITISV_028342 [Vitis vinifera]    61   4e-18
ref|XP_008370919.1| PREDICTED: uncharacterized protein LOC103434...    59   4e-18
emb|CAN71224.1| hypothetical protein VITISV_006366 [Vitis vinifera]    61   5e-18
emb|CAN69431.1| hypothetical protein VITISV_024659 [Vitis vinifera]    61   5e-18
emb|CAN76321.1| hypothetical protein VITISV_044445 [Vitis vinifera]    61   5e-18
emb|CAN74341.1| hypothetical protein VITISV_043997 [Vitis vinifera]    61   5e-18
emb|CAN74702.1| hypothetical protein VITISV_023139 [Vitis vinifera]    61   5e-18
emb|CAN69998.1| hypothetical protein VITISV_006839 [Vitis vinifera]    61   5e-18
emb|CAN60796.1| hypothetical protein VITISV_015834 [Vitis vinifera]    61   5e-18
gb|ABF96216.1| retrotransposon protein, putative, Ty1-copia subc...    60   5e-18
gb|AAP46197.1| putative gag-pol polyprotein [Oryza sativa Japoni...    60   5e-18

>dbj|BAD34493.1| Gag-Pol [Ipomoea batatas]
          Length = 1298

 Score = 71.2 bits (173), Expect(2) = 1e-21
 Identities = 31/53 (58%), Positives = 40/53 (75%)
 Frame = +1

Query: 124  VNRILRYLKGTADYSLYYQGNDFCLKGYTDADWGGDLDERKSTTGYAFALNNG 282
            V RILRY+KGT+D +L Y G+DF + GY D+D+ GDLD+ KSTTGY F +  G
Sbjct: 1121 VKRILRYIKGTSDVALCYGGSDFIINGYVDSDYAGDLDKSKSTTGYVFKVAGG 1173



 Score = 58.2 bits (139), Expect(2) = 1e-21
 Identities = 25/37 (67%), Positives = 30/37 (81%)
 Frame = +3

Query: 6    SSAVGNLMYAMMCTCPDICYVVGLVSRYQYNPGRGHW 116
            +SAVG+LM+AM+CT PDI   VG+VSRY  NPGR HW
Sbjct: 1082 ASAVGSLMFAMICTRPDIAQAVGVVSRYMANPGREHW 1118


>gb|AFB73911.1| polyprotein [Citrus sinensis]
          Length = 1309

 Score = 72.4 bits (176), Expect(2) = 4e-21
 Identities = 31/51 (60%), Positives = 42/51 (82%)
 Frame = +1

Query: 121  AVNRILRYLKGTADYSLYYQGNDFCLKGYTDADWGGDLDERKSTTGYAFAL 273
            AV RILRY++GT+D +L Y G++F ++GY D+D+ GDLD+RKSTTGY F L
Sbjct: 1131 AVKRILRYIRGTSDVALCYGGSEFTVRGYVDSDFAGDLDKRKSTTGYVFTL 1181



 Score = 55.5 bits (132), Expect(2) = 4e-21
 Identities = 24/37 (64%), Positives = 29/37 (78%)
 Frame = +3

Query: 6    SSAVGNLMYAMMCTCPDICYVVGLVSRYQYNPGRGHW 116
            +SAVG+LM+AM+CT PDI   VG+VSRY  NPG  HW
Sbjct: 1093 ASAVGSLMFAMICTRPDIAQAVGVVSRYMANPGGEHW 1129


>gb|AFB73912.1| polyprotein [Citrus sinensis]
          Length = 1309

 Score = 70.5 bits (171), Expect(2) = 2e-20
 Identities = 30/51 (58%), Positives = 42/51 (82%)
 Frame = +1

Query: 121  AVNRILRYLKGTADYSLYYQGNDFCLKGYTDADWGGDLDERKSTTGYAFAL 273
            AV RILRY++GT++ +L Y G++F ++GY D+D+ GDLD+RKSTTGY F L
Sbjct: 1131 AVKRILRYIRGTSNVALCYGGSEFTVRGYVDSDFAGDLDKRKSTTGYVFTL 1181



 Score = 54.7 bits (130), Expect(2) = 2e-20
 Identities = 24/37 (64%), Positives = 28/37 (75%)
 Frame = +3

Query: 6    SSAVGNLMYAMMCTCPDICYVVGLVSRYQYNPGRGHW 116
            +SAVG+LM+AM+CT PDI   VG VSRY  NPG  HW
Sbjct: 1093 ASAVGSLMFAMICTRPDIAQAVGAVSRYMANPGGEHW 1129


>gb|ACL97387.1| Gag-Pol polyprotein [Lotus japonicus]
          Length = 1305

 Score = 70.1 bits (170), Expect(2) = 3e-20
 Identities = 33/62 (53%), Positives = 45/62 (72%), Gaps = 4/62 (6%)
 Frame = +1

Query: 109  DTGK----AVNRILRYLKGTADYSLYYQGNDFCLKGYTDADWGGDLDERKSTTGYAFALN 276
            D GK    AV RILRY++GT+  +L + G++F ++GY D+D+ GDLD+RKSTTGY F L 
Sbjct: 1119 DPGKEHWNAVKRILRYIRGTSGAALCFGGSEFTIRGYVDSDFAGDLDKRKSTTGYVFTLA 1178

Query: 277  NG 282
             G
Sbjct: 1179 GG 1180



 Score = 54.7 bits (130), Expect(2) = 3e-20
 Identities = 23/39 (58%), Positives = 30/39 (76%)
 Frame = +3

Query: 6    SSAVGNLMYAMMCTCPDICYVVGLVSRYQYNPGRGHWKS 122
            +SAVG+LMYAM+CT PDI   VG VSR+  +PG+ HW +
Sbjct: 1089 ASAVGSLMYAMICTRPDIAQAVGTVSRFMADPGKEHWNA 1127


>sp|P10978.1|POLX_TOBAC RecName: Full=Retrovirus-related Pol polyprotein from transposon TNT
            1-94; Includes: RecName: Full=Protease; Includes:
            RecName: Full=Reverse transcriptase; Includes: RecName:
            Full=Endonuclease [Nicotiana tabacum]
            gi|20045|emb|CAA32025.1| unnamed protein product
            [Nicotiana tabacum]
          Length = 1328

 Score = 64.7 bits (156), Expect(2) = 5e-20
 Identities = 31/55 (56%), Positives = 38/55 (69%)
 Frame = +1

Query: 118  KAVNRILRYLKGTADYSLYYQGNDFCLKGYTDADWGGDLDERKSTTGYAFALNNG 282
            +AV  ILRYL+GT    L + G+D  LKGYTDAD  GD+D RKS+TGY F  + G
Sbjct: 1149 EAVKWILRYLRGTTGDCLCFGGSDPILKGYTDADMAGDIDNRKSSTGYLFTFSGG 1203



 Score = 59.3 bits (142), Expect(2) = 5e-20
 Identities = 25/39 (64%), Positives = 33/39 (84%)
 Frame = +3

Query: 6    SSAVGNLMYAMMCTCPDICYVVGLVSRYQYNPGRGHWKS 122
            SSAVG+LMYAM+CT PDI + VG+VSR+  NPG+ HW++
Sbjct: 1112 SSAVGSLMYAMVCTRPDIAHAVGVVSRFLENPGKEHWEA 1150


>gb|ABG22119.1| polyprotein [Cynara cardunculus var. scolymus]
          Length = 358

 Score = 64.7 bits (156), Expect(2) = 9e-20
 Identities = 28/41 (68%), Positives = 33/41 (80%)
 Frame = +3

Query: 6   SSAVGNLMYAMMCTCPDICYVVGLVSRYQYNPGRGHWKSSQ 128
           SSAVG+LMYAM+CT PD+ Y V +VSRY  NPGR HWK+ Q
Sbjct: 190 SSAVGSLMYAMICTRPDLAYAVSMVSRYMANPGREHWKAVQ 230



 Score = 58.5 bits (140), Expect(2) = 9e-20
 Identities = 26/54 (48%), Positives = 37/54 (68%)
 Frame = +1

Query: 118 KAVNRILRYLKGTADYSLYYQGNDFCLKGYTDADWGGDLDERKSTTGYAFALNN 279
           KAV  +LRYL GT DY + +  +   ++GY D+D+GGDLD R+S TGY F + +
Sbjct: 227 KAVQWVLRYLSGTRDYCMCFGTSRDGVQGYVDSDYGGDLDGRRSLTGYVFTMGS 280


>gb|AAW22873.1| putative polyprotein [Solanum lycopersicum]
          Length = 687

 Score = 62.8 bits (151), Expect(2) = 6e-19
 Identities = 30/55 (54%), Positives = 39/55 (70%)
 Frame = +1

Query: 118 KAVNRILRYLKGTADYSLYYQGNDFCLKGYTDADWGGDLDERKSTTGYAFALNNG 282
           +AV  ILRYL+GT++ SL + G +  L+G+TDAD  GDLD RKST+GY F    G
Sbjct: 509 EAVKWILRYLRGTSNLSLCFGGGEPILEGFTDADMAGDLDNRKSTSGYLFKFARG 563



 Score = 57.8 bits (138), Expect(2) = 6e-19
 Identities = 25/39 (64%), Positives = 31/39 (79%)
 Frame = +3

Query: 6   SSAVGNLMYAMMCTCPDICYVVGLVSRYQYNPGRGHWKS 122
           SS VG+LMYAM+CT PDI + VGLVSRY  NP + HW++
Sbjct: 472 SSVVGSLMYAMVCTRPDIAHAVGLVSRYLANPSKVHWEA 510


>gb|ABG22123.1| polyprotein [Prunus avium]
          Length = 276

 Score = 61.6 bits (148), Expect(2) = 2e-18
 Identities = 25/39 (64%), Positives = 33/39 (84%)
 Frame = +3

Query: 6   SSAVGNLMYAMMCTCPDICYVVGLVSRYQYNPGRGHWKS 122
           +SAVG+LMYAM+CT PDI   V +VSRY +NPG+GHW++
Sbjct: 106 ASAVGSLMYAMVCTRPDISQAVSIVSRYMHNPGKGHWQA 144



 Score = 57.4 bits (137), Expect(2) = 2e-18
 Identities = 27/58 (46%), Positives = 38/58 (65%), Gaps = 3/58 (5%)
 Frame = +1

Query: 118 KAVNRILRYLKGTADYSLYYQGNDF---CLKGYTDADWGGDLDERKSTTGYAFALNNG 282
           +AV  ILRY+ GT D  L +Q +     C+ GY D+D+ GDLD+R+STTG+ F +  G
Sbjct: 143 QAVKWILRYILGTVDVGLLFQQDKVSGQCVVGYVDSDYAGDLDKRRSTTGFVFTIAGG 200


>emb|CAN83951.1| hypothetical protein VITISV_043907 [Vitis vinifera]
          Length = 745

 Score = 61.2 bits (147), Expect(2) = 3e-18
 Identities = 24/41 (58%), Positives = 34/41 (82%)
 Frame = +3

Query: 6   SSAVGNLMYAMMCTCPDICYVVGLVSRYQYNPGRGHWKSSQ 128
           +SAVG+LMYA +CT PDI + VG++ RYQ NPG+ HWK+++
Sbjct: 485 ASAVGSLMYAQVCTRPDIAFAVGMLGRYQSNPGKDHWKAAK 525



 Score = 57.0 bits (136), Expect(2) = 3e-18
 Identities = 27/60 (45%), Positives = 41/60 (68%), Gaps = 1/60 (1%)
 Frame = +1

Query: 106 EDTGKAVNRILRYLKGTADYSLYYQG-NDFCLKGYTDADWGGDLDERKSTTGYAFALNNG 282
           +D  KA  +++RYL+GT DY L Y+  ++  + GY+D+D+ G +D RKST+GY F L  G
Sbjct: 518 KDHWKAAKKVMRYLQGTKDYKLMYRRTSNLEVVGYSDSDFAGCVDSRKSTSGYIFILAGG 577


>emb|CAN65504.1| hypothetical protein VITISV_028342 [Vitis vinifera]
          Length = 1252

 Score = 61.2 bits (147), Expect(2) = 4e-18
 Identities = 29/52 (55%), Positives = 36/52 (69%)
 Frame = +1

Query: 118  KAVNRILRYLKGTADYSLYYQGNDFCLKGYTDADWGGDLDERKSTTGYAFAL 273
            +AV  ILRYLKG+ D  L + G    L+GY DAD+ GD+D RKSTTG+ F L
Sbjct: 891  EAVKWILRYLKGSLDTCLCFTGASLKLQGYVDADFAGDIDSRKSTTGFVFTL 942



 Score = 56.6 bits (135), Expect(2) = 4e-18
 Identities = 22/39 (56%), Positives = 32/39 (82%)
 Frame = +3

Query: 6   SSAVGNLMYAMMCTCPDICYVVGLVSRYQYNPGRGHWKS 122
           +SA+G+LMYAM+CT PDI + VG+VSR+   PG+ HW++
Sbjct: 854 ASAIGSLMYAMVCTRPDIAHAVGIVSRFMSRPGKQHWEA 892


>ref|XP_008370919.1| PREDICTED: uncharacterized protein LOC103434364 [Malus domestica]
          Length = 1100

 Score = 58.9 bits (141), Expect(2) = 4e-18
 Identities = 23/39 (58%), Positives = 32/39 (82%)
 Frame = +3

Query: 6   SSAVGNLMYAMMCTCPDICYVVGLVSRYQYNPGRGHWKS 122
           ++ VG+LMYAM+CT PDI   V +VSRY +NPG+GHW++
Sbjct: 254 ANVVGSLMYAMVCTRPDISQAVSIVSRYMHNPGKGHWQA 292



 Score = 58.9 bits (141), Expect(2) = 4e-18
 Identities = 28/58 (48%), Positives = 38/58 (65%), Gaps = 3/58 (5%)
 Frame = +1

Query: 118 KAVNRILRYLKGTADYSLYYQGNDF---CLKGYTDADWGGDLDERKSTTGYAFALNNG 282
           +AV  ILRY+ GT D  L +Q + F   C+ GY D D+ GDLD+R+STTG+ F +  G
Sbjct: 291 QAVKWILRYILGTVDVGLLFQRDKFTGQCVVGYVDFDYAGDLDKRRSTTGFVFTIAGG 348


>emb|CAN71224.1| hypothetical protein VITISV_006366 [Vitis vinifera]
          Length = 1951

 Score = 61.2 bits (147), Expect(2) = 5e-18
 Identities = 29/52 (55%), Positives = 36/52 (69%)
 Frame = +1

Query: 118 KAVNRILRYLKGTADYSLYYQGNDFCLKGYTDADWGGDLDERKSTTGYAFAL 273
           +AV  ILRYLKG+ D  L + G    L+GY DAD+ GD+D RKSTTG+ F L
Sbjct: 138 EAVKWILRYLKGSLDTCLCFTGASLKLQGYVDADFAGDIDSRKSTTGFVFTL 189



 Score = 56.2 bits (134), Expect(2) = 5e-18
 Identities = 22/39 (56%), Positives = 32/39 (82%)
 Frame = +3

Query: 6   SSAVGNLMYAMMCTCPDICYVVGLVSRYQYNPGRGHWKS 122
           +SA+G+LMYAM+CT PDI + VG+VSR+   PG+ HW++
Sbjct: 101 ASAIGSLMYAMVCTKPDIAHAVGVVSRFMSRPGKQHWEA 139


>emb|CAN69431.1| hypothetical protein VITISV_024659 [Vitis vinifera]
          Length = 1287

 Score = 61.2 bits (147), Expect(2) = 5e-18
 Identities = 29/52 (55%), Positives = 36/52 (69%)
 Frame = +1

Query: 118  KAVNRILRYLKGTADYSLYYQGNDFCLKGYTDADWGGDLDERKSTTGYAFAL 273
            +AV  ILRYLKG+ D  L + G    L+GY DAD+ GD+D RKSTTG+ F L
Sbjct: 1109 EAVKWILRYLKGSLDTCLCFTGASLKLQGYVDADFAGDIDSRKSTTGFVFTL 1160



 Score = 56.2 bits (134), Expect(2) = 5e-18
 Identities = 22/39 (56%), Positives = 32/39 (82%)
 Frame = +3

Query: 6    SSAVGNLMYAMMCTCPDICYVVGLVSRYQYNPGRGHWKS 122
            +SA+G+LMYAM+CT PDI + VG+VSR+   PG+ HW++
Sbjct: 1072 ASAIGSLMYAMVCTRPDIAHAVGVVSRFMSRPGKQHWEA 1110


>emb|CAN76321.1| hypothetical protein VITISV_044445 [Vitis vinifera]
          Length = 1279

 Score = 61.2 bits (147), Expect(2) = 5e-18
 Identities = 29/52 (55%), Positives = 36/52 (69%)
 Frame = +1

Query: 118  KAVNRILRYLKGTADYSLYYQGNDFCLKGYTDADWGGDLDERKSTTGYAFAL 273
            +AV  ILRYLKG+ D  L + G    L+GY DAD+ GD+D RKSTTG+ F L
Sbjct: 1101 EAVKWILRYLKGSLDTCLCFTGASLKLQGYVDADFAGDIDSRKSTTGFVFTL 1152



 Score = 56.2 bits (134), Expect(2) = 5e-18
 Identities = 22/39 (56%), Positives = 32/39 (82%)
 Frame = +3

Query: 6    SSAVGNLMYAMMCTCPDICYVVGLVSRYQYNPGRGHWKS 122
            +SA+G+LMYAM+CT PDI + VG+VSR+   PG+ HW++
Sbjct: 1064 ASAIGSLMYAMVCTRPDIAHAVGVVSRFMSRPGKQHWEA 1102


>emb|CAN74341.1| hypothetical protein VITISV_043997 [Vitis vinifera]
          Length = 1269

 Score = 61.2 bits (147), Expect(2) = 5e-18
 Identities = 29/52 (55%), Positives = 36/52 (69%)
 Frame = +1

Query: 118  KAVNRILRYLKGTADYSLYYQGNDFCLKGYTDADWGGDLDERKSTTGYAFAL 273
            +AV  ILRYLKG+ D  L + G    L+GY DAD+ GD+D RKSTTG+ F L
Sbjct: 1091 EAVKWILRYLKGSLDTCLCFTGASLKLQGYVDADFAGDIDSRKSTTGFVFTL 1142



 Score = 56.2 bits (134), Expect(2) = 5e-18
 Identities = 22/39 (56%), Positives = 32/39 (82%)
 Frame = +3

Query: 6    SSAVGNLMYAMMCTCPDICYVVGLVSRYQYNPGRGHWKS 122
            +SA+G+LMYAM+CT PDI + VG+VSR+   PG+ HW++
Sbjct: 1054 ASAIGSLMYAMVCTRPDIAHAVGVVSRFMSRPGKQHWEA 1092


>emb|CAN74702.1| hypothetical protein VITISV_023139 [Vitis vinifera]
          Length = 1222

 Score = 61.2 bits (147), Expect(2) = 5e-18
 Identities = 29/52 (55%), Positives = 36/52 (69%)
 Frame = +1

Query: 118  KAVNRILRYLKGTADYSLYYQGNDFCLKGYTDADWGGDLDERKSTTGYAFAL 273
            +AV  ILRYLKG+ D  L + G    L+GY DAD+ GD+D RKSTTG+ F L
Sbjct: 1044 EAVKWILRYLKGSLDTCLCFTGASLKLQGYVDADFAGDIDSRKSTTGFVFTL 1095



 Score = 56.2 bits (134), Expect(2) = 5e-18
 Identities = 22/39 (56%), Positives = 32/39 (82%)
 Frame = +3

Query: 6    SSAVGNLMYAMMCTCPDICYVVGLVSRYQYNPGRGHWKS 122
            +SA+G+LMYAM+CT PDI + VG+VSR+   PG+ HW++
Sbjct: 1007 ASAIGSLMYAMVCTRPDIAHAVGVVSRFMSRPGKQHWEA 1045


>emb|CAN69998.1| hypothetical protein VITISV_006839 [Vitis vinifera]
          Length = 1211

 Score = 61.2 bits (147), Expect(2) = 5e-18
 Identities = 29/52 (55%), Positives = 36/52 (69%)
 Frame = +1

Query: 118  KAVNRILRYLKGTADYSLYYQGNDFCLKGYTDADWGGDLDERKSTTGYAFAL 273
            +AV  ILRYLKG+ D  L + G    L+GY DAD+ GD+D RKSTTG+ F L
Sbjct: 1033 EAVKWILRYLKGSLDTCLCFTGASLKLQGYVDADFAGDIDSRKSTTGFVFTL 1084



 Score = 56.2 bits (134), Expect(2) = 5e-18
 Identities = 22/39 (56%), Positives = 32/39 (82%)
 Frame = +3

Query: 6    SSAVGNLMYAMMCTCPDICYVVGLVSRYQYNPGRGHWKS 122
            +SA+G+LMYAM+CT PDI + VG+VSR+   PG+ HW++
Sbjct: 996  ASAIGSLMYAMVCTRPDIAHAVGVVSRFMSRPGKQHWEA 1034


>emb|CAN60796.1| hypothetical protein VITISV_015834 [Vitis vinifera]
          Length = 1186

 Score = 61.2 bits (147), Expect(2) = 5e-18
 Identities = 29/52 (55%), Positives = 36/52 (69%)
 Frame = +1

Query: 118 KAVNRILRYLKGTADYSLYYQGNDFCLKGYTDADWGGDLDERKSTTGYAFAL 273
           +AV  ILRYLKG+ D  L + G    L+GY DAD+ GD+D RKSTTG+ F L
Sbjct: 800 EAVKWILRYLKGSLDTCLCFTGASLKLQGYVDADFAGDIDSRKSTTGFVFTL 851



 Score = 56.2 bits (134), Expect(2) = 5e-18
 Identities = 22/39 (56%), Positives = 32/39 (82%)
 Frame = +3

Query: 6   SSAVGNLMYAMMCTCPDICYVVGLVSRYQYNPGRGHWKS 122
           +SA+G+LMYAM+CT PDI + VG+VSR+   PG+ HW++
Sbjct: 763 ASAIGSLMYAMVCTRPDIAHAVGVVSRFMSRPGKQHWEA 801


>gb|ABF96216.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
           Japonica Group]
          Length = 904

 Score = 60.1 bits (144), Expect(2) = 5e-18
 Identities = 29/59 (49%), Positives = 40/59 (67%), Gaps = 1/59 (1%)
 Frame = +1

Query: 109 DTGKAVNRILRYLKGTADYSLYYQ-GNDFCLKGYTDADWGGDLDERKSTTGYAFALNNG 282
           D  KAV ++LRY +GT DY L Y+   +  + GY+DAD+ G +D +KST+GY F L NG
Sbjct: 717 DHWKAVKKVLRYFQGTKDYMLTYKKSEELEVLGYSDADFAGCVDTKKSTSGYVFTLANG 775



 Score = 57.4 bits (137), Expect(2) = 5e-18
 Identities = 23/39 (58%), Positives = 32/39 (82%)
 Frame = +3

Query: 6   SSAVGNLMYAMMCTCPDICYVVGLVSRYQYNPGRGHWKS 122
           +SAVG+LMYA +CT PD+ +V G++SR+Q NPG  HWK+
Sbjct: 683 ASAVGSLMYAEVCTRPDLAFVTGMLSRFQSNPGLDHWKA 721


>gb|AAP46197.1| putative gag-pol polyprotein [Oryza sativa Japonica Group]
          Length = 890

 Score = 60.1 bits (144), Expect(2) = 5e-18
 Identities = 29/59 (49%), Positives = 40/59 (67%), Gaps = 1/59 (1%)
 Frame = +1

Query: 109 DTGKAVNRILRYLKGTADYSLYYQ-GNDFCLKGYTDADWGGDLDERKSTTGYAFALNNG 282
           D  KAV ++LRY +GT DY L Y+   +  + GY+DAD+ G +D +KST+GY F L NG
Sbjct: 703 DHWKAVKKVLRYFQGTKDYMLTYKKSEELEVLGYSDADFAGCVDTKKSTSGYVFTLANG 761



 Score = 57.4 bits (137), Expect(2) = 5e-18
 Identities = 23/39 (58%), Positives = 32/39 (82%)
 Frame = +3

Query: 6   SSAVGNLMYAMMCTCPDICYVVGLVSRYQYNPGRGHWKS 122
           +SAVG+LMYA +CT PD+ +V G++SR+Q NPG  HWK+
Sbjct: 669 ASAVGSLMYAEVCTRPDLAFVTGMLSRFQSNPGLDHWKA 707


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