BLASTX nr result

ID: Forsythia22_contig00039792 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Forsythia22_contig00039792
         (219 letters)

Database: ./nr 
           69,698,275 sequences; 24,982,196,650 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_011073462.1| PREDICTED: F-box/kelch-repeat protein At3g23...    62   1e-07
ref|XP_006366856.1| PREDICTED: F-box/kelch-repeat protein At3g23...    60   6e-07
ref|XP_009619982.1| PREDICTED: F-box/kelch-repeat protein At3g23...    58   3e-06
ref|NP_001241466.1| uncharacterized protein LOC100815072 [Glycin...    57   6e-06

>ref|XP_011073462.1| PREDICTED: F-box/kelch-repeat protein At3g23880-like [Sesamum
           indicum]
          Length = 385

 Score = 62.0 bits (149), Expect = 1e-07
 Identities = 28/43 (65%), Positives = 36/43 (83%)
 Frame = -1

Query: 219 SLVKFRCVCKPWLSLISSPQFAKTHLKISSEKNKGEHDRLVLG 91
           +L++FRCV K WLSLISSP+F KTHL+ISS+ N   H+RLV+G
Sbjct: 45  ALLRFRCVSKSWLSLISSPRFIKTHLRISSKSNIYSHNRLVVG 87


>ref|XP_006366856.1| PREDICTED: F-box/kelch-repeat protein At3g23880-like [Solanum
           tuberosum]
          Length = 376

 Score = 60.1 bits (144), Expect = 6e-07
 Identities = 27/69 (39%), Positives = 46/69 (66%)
 Frame = -1

Query: 219 SLVKFRCVCKPWLSLISSPQFAKTHLKISSEKNKGEHDRLVLGCTSDYGVFLRSINLDSF 40
           SL+KF+C+ K WL+LISS +F KTHL++++   +  H ++++ C S+YG   +S +L S 
Sbjct: 26  SLLKFKCISKSWLALISSSEFVKTHLRLNANNKEYTHHKVMMRCISNYG--FKSCSLTSL 83

Query: 39  MHGKNFTDA 13
            +    T+A
Sbjct: 84  FNESCVTEA 92


>ref|XP_009619982.1| PREDICTED: F-box/kelch-repeat protein At3g23880-like [Nicotiana
           tomentosiformis]
          Length = 384

 Score = 57.8 bits (138), Expect = 3e-06
 Identities = 33/73 (45%), Positives = 46/73 (63%)
 Frame = -1

Query: 219 SLVKFRCVCKPWLSLISSPQFAKTHLKISSEKNKGEHDRLVLGCTSDYGVFLRSINLDSF 40
           SL++F+CV K WLSLISS QFAK+HLKIS++ N   H +L+L  +      L S  L S 
Sbjct: 22  SLLRFKCVSKSWLSLISSSQFAKSHLKISAKHNNFSHKKLLL-LSMYLPHTLYSCPLYSV 80

Query: 39  MHGKNFTDAAKVY 1
           +H K  +   ++Y
Sbjct: 81  LHEKFISSVNELY 93


>ref|NP_001241466.1| uncharacterized protein LOC100815072 [Glycine max]
           gi|255637050|gb|ACU18857.1| unknown [Glycine max]
          Length = 406

 Score = 56.6 bits (135), Expect = 6e-06
 Identities = 29/67 (43%), Positives = 40/67 (59%)
 Frame = -1

Query: 219 SLVKFRCVCKPWLSLISSPQFAKTHLKISSEKNKGEHDRLVLGCTSDYGVFLRSINLDSF 40
           SL++FRCVCK W+SLIS P F K HL +SS      H R++L  T+     L+S +L S 
Sbjct: 65  SLLQFRCVCKSWMSLISDPYFMKKHLHLSSRCTHFTHHRIILSATT-AEFHLKSCSLSSL 123

Query: 39  MHGKNFT 19
            +  + T
Sbjct: 124 FNNPSST 130


Top