BLASTX nr result
ID: Forsythia22_contig00039532
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Forsythia22_contig00039532
(364 letters)
Database: ./nr
69,698,275 sequences; 24,982,196,650 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|YP_009122717.1| RNA polymerase beta subunit (chloroplast) [D... 56 8e-06
gb|AIW05343.1| RNA polymerase beta subunit [Epigynum auritum] 56 8e-06
gb|ADD31201.1| RNA polymerase beta subunit protein (chloroplast)... 56 8e-06
ref|YP_009121165.1| RNA polymerase beta subunit (chloroplast) [P... 56 8e-06
ref|YP_008815196.1| RNA polymerase beta subunit (chloroplast) [K... 56 8e-06
ref|YP_008815109.1| RNA polymerase beta subunit (chloroplast) [S... 56 8e-06
ref|YP_008815022.1| RNA polymerase beta subunit (chloroplast) [M... 56 8e-06
ref|YP_008814935.1| RNA polymerase beta subunit (chloroplast) [B... 56 8e-06
ref|YP_008814848.1| RNA polymerase beta subunit (chloroplast) [A... 56 8e-06
ref|YP_086958.1| RNA polymerase beta subunit [Panax ginseng] gi|... 56 8e-06
gb|ADK89685.1| RNA polymerase beta subunit (chloroplast) [Hydroc... 56 8e-06
ref|YP_004935544.1| RNA polymerase beta subunit (chloroplast) [E... 56 8e-06
>ref|YP_009122717.1| RNA polymerase beta subunit (chloroplast) [Dendropanax dentiger]
gi|755571710|gb|AJK29846.1| RNA polymerase beta subunit
(chloroplast) [Dendropanax dentiger]
Length = 1070
Score = 56.2 bits (134), Expect = 8e-06
Identities = 28/34 (82%), Positives = 30/34 (88%)
Frame = +2
Query: 248 ESFILLVQKLRSSALEFNHFFVFEKNFQINRKEA 349
ESF LLV++LRS ALE NHFFV EKNFQINRKEA
Sbjct: 1037 ESFRLLVRELRSLALELNHFFVSEKNFQINRKEA 1070
>gb|AIW05343.1| RNA polymerase beta subunit [Epigynum auritum]
Length = 1062
Score = 56.2 bits (134), Expect = 8e-06
Identities = 28/34 (82%), Positives = 30/34 (88%)
Frame = +2
Query: 248 ESFILLVQKLRSSALEFNHFFVFEKNFQINRKEA 349
ESF LLV++LRS ALE NHFFV EKNFQINRKEA
Sbjct: 1029 ESFRLLVRELRSLALELNHFFVSEKNFQINRKEA 1062
>gb|ADD31201.1| RNA polymerase beta subunit protein (chloroplast) [Euonymus
americanus]
Length = 1072
Score = 56.2 bits (134), Expect = 8e-06
Identities = 28/34 (82%), Positives = 30/34 (88%)
Frame = +2
Query: 248 ESFILLVQKLRSSALEFNHFFVFEKNFQINRKEA 349
ESF LLV++LRS ALE NHFFV EKNFQINRKEA
Sbjct: 1039 ESFRLLVRELRSLALELNHFFVSEKNFQINRKEA 1072
>ref|YP_009121165.1| RNA polymerase beta subunit (chloroplast) [Panax notoginseng]
gi|884997637|ref|YP_009155420.1| RpoB (chloroplast)
[Panax quinquefolius] gi|506444453|gb|AGM15015.1| RNA
polymerase beta subunit (chloroplast) [Panax ginseng]
gi|506444541|gb|AGM15101.1| RNA polymerase beta subunit
(chloroplast) [Panax ginseng] gi|506444657|gb|AGM15187.1|
RNA polymerase beta subunit (chloroplast) [Panax ginseng]
gi|545484755|gb|AGW31947.1| RNA polymerase beta subunit
(chloroplast) [Panax ginseng] gi|638920724|gb|AIA24319.1|
RNA polymerase beta subunit (chloroplast) [Panax
notoginseng] gi|723604094|gb|AIX97881.1| RpoB
(chloroplast) [Panax ginseng] gi|723604182|gb|AIX97968.1|
RpoB (chloroplast) [Panax ginseng]
gi|723604266|gb|AIX98051.1| RpoB (chloroplast) [Panax
ginseng] gi|723604352|gb|AIX98136.1| RpoB (chloroplast)
[Panax ginseng] gi|723604438|gb|AIX98221.1| RpoB
(chloroplast) [Panax ginseng] gi|723604524|gb|AIX98306.1|
RpoB (chloroplast) [Panax ginseng]
gi|723604610|gb|AIX98391.1| RpoB (chloroplast) [Panax
ginseng] gi|723604696|gb|AIX98476.1| RpoB (chloroplast)
[Panax ginseng] gi|723604782|gb|AIX98561.1| RpoB
(chloroplast) [Panax ginseng] gi|744671688|gb|AJC99480.1|
RpoB (chloroplast) [Panax quinquefolius]
gi|744671799|gb|AJC99565.1| RpoB (chloroplast) [Panax
ginseng] gi|744671907|gb|AJC99650.1| RpoB (chloroplast)
[Panax ginseng] gi|818214033|gb|AKG26592.1| RNA
polymerase beta subunit (chloroplast) [Panax notoginseng]
Length = 1071
Score = 56.2 bits (134), Expect = 8e-06
Identities = 28/34 (82%), Positives = 30/34 (88%)
Frame = +2
Query: 248 ESFILLVQKLRSSALEFNHFFVFEKNFQINRKEA 349
ESF LLV++LRS ALE NHFFV EKNFQINRKEA
Sbjct: 1038 ESFRLLVRELRSLALELNHFFVSEKNFQINRKEA 1071
>ref|YP_008815196.1| RNA polymerase beta subunit (chloroplast) [Kalopanax septemlobus]
gi|458599604|gb|AGG39296.1| RNA polymerase beta subunit
(chloroplast) [Kalopanax septemlobus]
Length = 1070
Score = 56.2 bits (134), Expect = 8e-06
Identities = 28/34 (82%), Positives = 30/34 (88%)
Frame = +2
Query: 248 ESFILLVQKLRSSALEFNHFFVFEKNFQINRKEA 349
ESF LLV++LRS ALE NHFFV EKNFQINRKEA
Sbjct: 1037 ESFRLLVRELRSLALELNHFFVSEKNFQINRKEA 1070
>ref|YP_008815109.1| RNA polymerase beta subunit (chloroplast) [Schefflera delavayi]
gi|458599516|gb|AGG39209.1| RNA polymerase beta subunit
(chloroplast) [Schefflera delavayi]
Length = 1070
Score = 56.2 bits (134), Expect = 8e-06
Identities = 28/34 (82%), Positives = 30/34 (88%)
Frame = +2
Query: 248 ESFILLVQKLRSSALEFNHFFVFEKNFQINRKEA 349
ESF LLV++LRS ALE NHFFV EKNFQINRKEA
Sbjct: 1037 ESFRLLVRELRSLALELNHFFVSEKNFQINRKEA 1070
>ref|YP_008815022.1| RNA polymerase beta subunit (chloroplast) [Metapanax delavayi]
gi|458599363|gb|AGG39122.1| RNA polymerase beta subunit
(chloroplast) [Metapanax delavayi]
Length = 1068
Score = 56.2 bits (134), Expect = 8e-06
Identities = 28/34 (82%), Positives = 30/34 (88%)
Frame = +2
Query: 248 ESFILLVQKLRSSALEFNHFFVFEKNFQINRKEA 349
ESF LLV++LRS ALE NHFFV EKNFQINRKEA
Sbjct: 1035 ESFRLLVRELRSLALELNHFFVSEKNFQINRKEA 1068
>ref|YP_008814935.1| RNA polymerase beta subunit (chloroplast) [Brassaiopsis hainla]
gi|458599184|gb|AGG39035.1| RNA polymerase beta subunit
(chloroplast) [Brassaiopsis hainla]
Length = 1070
Score = 56.2 bits (134), Expect = 8e-06
Identities = 28/34 (82%), Positives = 30/34 (88%)
Frame = +2
Query: 248 ESFILLVQKLRSSALEFNHFFVFEKNFQINRKEA 349
ESF LLV++LRS ALE NHFFV EKNFQINRKEA
Sbjct: 1037 ESFRLLVRELRSLALELNHFFVSEKNFQINRKEA 1070
>ref|YP_008814848.1| RNA polymerase beta subunit (chloroplast) [Aralia undulata]
gi|458599082|gb|AGG38948.1| RNA polymerase beta subunit
(chloroplast) [Aralia undulata]
Length = 1070
Score = 56.2 bits (134), Expect = 8e-06
Identities = 28/34 (82%), Positives = 30/34 (88%)
Frame = +2
Query: 248 ESFILLVQKLRSSALEFNHFFVFEKNFQINRKEA 349
ESF LLV++LRS ALE NHFFV EKNFQINRKEA
Sbjct: 1037 ESFRLLVRELRSLALELNHFFVSEKNFQINRKEA 1070
>ref|YP_086958.1| RNA polymerase beta subunit [Panax ginseng]
gi|68053101|sp|Q68S14.1|RPOB_PANGI RecName:
Full=DNA-directed RNA polymerase subunit beta; AltName:
Full=PEP; AltName: Full=Plastid-encoded RNA polymerase
subunit beta; Short=RNA polymerase subunit beta
(chloroplast) [Panax ginseng] gi|51235305|gb|AAT98501.1|
RNA polymerase beta subunit [Panax ginseng]
Length = 1071
Score = 56.2 bits (134), Expect = 8e-06
Identities = 28/34 (82%), Positives = 30/34 (88%)
Frame = +2
Query: 248 ESFILLVQKLRSSALEFNHFFVFEKNFQINRKEA 349
ESF LLV++LRS ALE NHFFV EKNFQINRKEA
Sbjct: 1038 ESFRLLVRELRSLALELNHFFVSEKNFQINRKEA 1071
>gb|ADK89685.1| RNA polymerase beta subunit (chloroplast) [Hydrocotyle verticillata]
Length = 1070
Score = 56.2 bits (134), Expect = 8e-06
Identities = 28/34 (82%), Positives = 30/34 (88%)
Frame = +2
Query: 248 ESFILLVQKLRSSALEFNHFFVFEKNFQINRKEA 349
ESF LLV++LRS ALE NHFFV EKNFQINRKEA
Sbjct: 1037 ESFRLLVRELRSLALELNHFFVSEKNFQINRKEA 1070
>ref|YP_004935544.1| RNA polymerase beta subunit (chloroplast) [Eleutherococcus
senticosus] gi|347448199|gb|AEO92611.1| RNA polymerase
beta subunit (chloroplast) [Eleutherococcus senticosus]
Length = 1070
Score = 56.2 bits (134), Expect = 8e-06
Identities = 28/34 (82%), Positives = 30/34 (88%)
Frame = +2
Query: 248 ESFILLVQKLRSSALEFNHFFVFEKNFQINRKEA 349
ESF LLV++LRS ALE NHFFV EKNFQINRKEA
Sbjct: 1037 ESFRLLVRELRSLALELNHFFVSEKNFQINRKEA 1070