BLASTX nr result
ID: Forsythia22_contig00039140
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Forsythia22_contig00039140
(241 letters)
Database: ./nr
69,698,275 sequences; 24,982,196,650 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|AAG51464.1|AC069160_10 gypsy/Ty3 element polyprotein, putativ... 64 2e-12
gb|AAD24647.1| putative retroelement pol polyprotein [Arabidopsi... 63 3e-12
gb|AAG51046.1|AC069473_8 gypsy/Ty-3 retroelement polyprotein; 69... 62 7e-12
ref|XP_006475543.1| PREDICTED: uncharacterized protein LOC102610... 57 2e-11
emb|CAN76793.1| hypothetical protein VITISV_026680 [Vitis vinifera] 59 2e-11
emb|CAN66607.1| hypothetical protein VITISV_017554 [Vitis vinifera] 59 7e-11
gb|ABD78322.1| polyprotein [Primula vulgaris] 57 9e-11
emb|CAN83300.1| hypothetical protein VITISV_044100 [Vitis vinifera] 59 2e-10
ref|XP_012836036.1| PREDICTED: uncharacterized protein LOC105956... 58 2e-10
ref|XP_011468582.1| PREDICTED: uncharacterized protein LOC101308... 59 3e-10
ref|XP_011100536.1| PREDICTED: LOW QUALITY PROTEIN: uncharacteri... 62 4e-10
emb|CAN80491.1| hypothetical protein VITISV_042679 [Vitis vinifera] 57 6e-10
emb|CAN80132.1| hypothetical protein VITISV_012031 [Vitis vinifera] 57 6e-10
ref|XP_004293097.1| PREDICTED: retrovirus-related Pol polyprotei... 58 7e-10
gb|ACB28472.1| polyprotein [Ananas comosus] 57 7e-10
gb|ABA93839.1| retrotransposon protein, putative, unclassified [... 58 1e-09
emb|CAN60890.1| hypothetical protein VITISV_011880 [Vitis vinifera] 55 2e-09
ref|XP_010418845.1| PREDICTED: uncharacterized protein LOC104704... 63 8e-09
emb|CAJ86299.1| H0124B04.16 [Oryza sativa Indica Group] 54 1e-08
ref|XP_006356750.1| PREDICTED: uncharacterized protein LOC102604... 55 1e-08
>gb|AAG51464.1|AC069160_10 gypsy/Ty3 element polyprotein, putative [Arabidopsis thaliana]
Length = 1447
Score = 63.9 bits (154), Expect(2) = 2e-12
Identities = 34/58 (58%), Positives = 42/58 (72%)
Frame = +3
Query: 3 GIRAVLMQGKRPLAFINKSIEAKSL*MSIYEKELLALVTAMIK*RLYLESHHFIIKID 176
GIRAVLMQ PLA+I++ ++ K L +SIYEKELLA + A+ K R YL HFIIK D
Sbjct: 877 GIRAVLMQKGHPLAYISRQLKGKQLHLSIYEKELLAFIFAVRKWRHYLLPSHFIIKTD 934
Score = 34.3 bits (77), Expect(2) = 2e-12
Identities = 13/21 (61%), Positives = 19/21 (90%)
Frame = +2
Query: 179 FLLEQRITTPLRQKWLTKLLD 241
+LLEQR+ TP++Q+WL KLL+
Sbjct: 940 YLLEQRLNTPVQQQWLPKLLE 960
>gb|AAD24647.1| putative retroelement pol polyprotein [Arabidopsis thaliana]
Length = 780
Score = 63.2 bits (152), Expect(2) = 3e-12
Identities = 34/58 (58%), Positives = 42/58 (72%)
Frame = +3
Query: 3 GIRAVLMQGKRPLAFINKSIEAKSL*MSIYEKELLALVTAMIK*RLYLESHHFIIKID 176
GI AVLMQ PLAFI++ ++ K L +SIYEKELLA++ + K R YL S HFIIK D
Sbjct: 297 GIGAVLMQEGHPLAFISRQLKGKQLHLSIYEKELLAVIFVVRKWRHYLISSHFIIKTD 354
Score = 34.7 bits (78), Expect(2) = 3e-12
Identities = 13/21 (61%), Positives = 19/21 (90%)
Frame = +2
Query: 179 FLLEQRITTPLRQKWLTKLLD 241
+LLEQR+ TP++Q+WL KLL+
Sbjct: 360 YLLEQRLNTPIQQQWLPKLLE 380
>gb|AAG51046.1|AC069473_8 gypsy/Ty-3 retroelement polyprotein; 69905-74404 [Arabidopsis
thaliana] gi|10998138|dbj|BAB03109.1| retroelement pol
polyprotein [Arabidopsis thaliana]
Length = 1499
Score = 62.0 bits (149), Expect(2) = 7e-12
Identities = 33/58 (56%), Positives = 42/58 (72%)
Frame = +3
Query: 3 GIRAVLMQGKRPLAFINKSIEAKSL*MSIYEKELLALVTAMIK*RLYLESHHFIIKID 176
GI AVLMQ PLA+I++ ++ K L +SIYEKELLA++ A+ K R YL HFIIK D
Sbjct: 906 GIGAVLMQEGHPLAYISRQLKGKQLHLSIYEKELLAVIFAVRKWRHYLLQSHFIIKTD 963
Score = 34.7 bits (78), Expect(2) = 7e-12
Identities = 13/21 (61%), Positives = 19/21 (90%)
Frame = +2
Query: 179 FLLEQRITTPLRQKWLTKLLD 241
+LLEQR+ TP++Q+WL KLL+
Sbjct: 969 YLLEQRLNTPIQQQWLPKLLE 989
>ref|XP_006475543.1| PREDICTED: uncharacterized protein LOC102610887 [Citrus sinensis]
Length = 1274
Score = 57.0 bits (136), Expect(2) = 2e-11
Identities = 29/60 (48%), Positives = 42/60 (70%)
Frame = +3
Query: 3 GIRAVLMQGKRPLAFINKSIEAKSL*MSIYEKELLALVTAMIK*RLYLESHHFIIKIDHF 182
GI AVL Q RP+++++K++ K+L +S YEKE+LA+V A+ K R YL HF + DHF
Sbjct: 727 GIGAVLSQEGRPISYLSKALSPKNLGLSAYEKEMLAVVFAVQKWRPYLLGKHFKVITDHF 786
Score = 38.1 bits (87), Expect(2) = 2e-11
Identities = 15/25 (60%), Positives = 21/25 (84%)
Frame = +2
Query: 164 H*DRSFLLEQRITTPLRQKWLTKLL 238
H ++LEQRI+TP++QKWLTKL+
Sbjct: 785 HFSLKYMLEQRISTPMQQKWLTKLI 809
>emb|CAN76793.1| hypothetical protein VITISV_026680 [Vitis vinifera]
Length = 1469
Score = 59.3 bits (142), Expect(2) = 2e-11
Identities = 31/58 (53%), Positives = 43/58 (74%)
Frame = +3
Query: 3 GIRAVLMQGKRPLAFINKSIEAKSL*MSIYEKELLALVTAMIK*RLYLESHHFIIKID 176
G+ AVLMQ RPLA+++++I K+L +S YEKEL+ALV A+ K R YL H+F I+ D
Sbjct: 869 GVGAVLMQQGRPLAYMSQAIHGKALQLSTYEKELMALVLAVKKWRSYLLGHNFKIQTD 926
Score = 35.4 bits (80), Expect(2) = 2e-11
Identities = 14/20 (70%), Positives = 19/20 (95%)
Frame = +2
Query: 179 FLLEQRITTPLRQKWLTKLL 238
+LLEQ++ TPL+QKW+TKLL
Sbjct: 932 YLLEQKMGTPLQQKWITKLL 951
>emb|CAN66607.1| hypothetical protein VITISV_017554 [Vitis vinifera]
Length = 2822
Score = 59.3 bits (142), Expect(2) = 7e-11
Identities = 31/58 (53%), Positives = 43/58 (74%)
Frame = +3
Query: 3 GIRAVLMQGKRPLAFINKSIEAKSL*MSIYEKELLALVTAMIK*RLYLESHHFIIKID 176
G+ AVLMQ RPLA+++++I K+L +S YEKEL+ALV A+ K R YL H+F I+ D
Sbjct: 822 GVGAVLMQQGRPLAYMSQAIHGKALQLSTYEKELMALVLAVKKWRSYLLGHNFKIQTD 879
Score = 33.9 bits (76), Expect(2) = 7e-11
Identities = 13/20 (65%), Positives = 19/20 (95%)
Frame = +2
Query: 179 FLLEQRITTPLRQKWLTKLL 238
+LLEQ++ TPL+Q+W+TKLL
Sbjct: 885 YLLEQKMGTPLQQQWITKLL 904
>gb|ABD78322.1| polyprotein [Primula vulgaris]
Length = 1359
Score = 57.4 bits (137), Expect(2) = 9e-11
Identities = 29/59 (49%), Positives = 40/59 (67%)
Frame = +3
Query: 3 GIRAVLMQGKRPLAFINKSIEAKSL*MSIYEKELLALVTAMIK*RLYLESHHFIIKIDH 179
G+ AVL Q KRP+AF +K+++ + L +S YEKEL ALV A+ K R Y+ FI+ DH
Sbjct: 793 GVGAVLQQEKRPIAFFSKALKGRLLTLSTYEKELYALVQAIQKWRPYICCQEFIVNTDH 851
Score = 35.4 bits (80), Expect(2) = 9e-11
Identities = 15/25 (60%), Positives = 20/25 (80%)
Frame = +2
Query: 164 H*DRSFLLEQRITTPLRQKWLTKLL 238
H +LLEQ+I+TP +QKWL+KLL
Sbjct: 851 HQSLKYLLEQKISTPSQQKWLSKLL 875
>emb|CAN83300.1| hypothetical protein VITISV_044100 [Vitis vinifera]
Length = 1366
Score = 59.3 bits (142), Expect(2) = 2e-10
Identities = 31/58 (53%), Positives = 43/58 (74%)
Frame = +3
Query: 3 GIRAVLMQGKRPLAFINKSIEAKSL*MSIYEKELLALVTAMIK*RLYLESHHFIIKID 176
G+ AVLMQ RPLA+++++I K+L +S YEKEL+ALV A+ K R YL H+F I+ D
Sbjct: 836 GVGAVLMQQGRPLAYMSQAIHGKALQLSTYEKELMALVLAVKKWRSYLLGHNFKIQTD 893
Score = 32.7 bits (73), Expect(2) = 2e-10
Identities = 12/20 (60%), Positives = 19/20 (95%)
Frame = +2
Query: 179 FLLEQRITTPLRQKWLTKLL 238
+LLE+++ TPL+Q+W+TKLL
Sbjct: 899 YLLEEKMGTPLQQQWITKLL 918
>ref|XP_012836036.1| PREDICTED: uncharacterized protein LOC105956698 [Erythranthe
guttatus]
Length = 1112
Score = 57.8 bits (138), Expect(2) = 2e-10
Identities = 31/58 (53%), Positives = 42/58 (72%)
Frame = +3
Query: 3 GIRAVLMQGKRPLAFINKSIEAKSL*MSIYEKELLALVTAMIK*RLYLESHHFIIKID 176
GI AVLMQ PLAF++K++ KSL +S+YEKE LA++ A+ K R YL F+I+ID
Sbjct: 920 GIGAVLMQEGHPLAFLSKALGPKSLGLSVYEKEFLAILLAVQKWRDYLVHATFVIRID 977
Score = 33.9 bits (76), Expect(2) = 2e-10
Identities = 14/20 (70%), Positives = 19/20 (95%)
Frame = +2
Query: 179 FLLEQRITTPLRQKWLTKLL 238
+LLEQ+ITTP++QK+L KLL
Sbjct: 983 YLLEQKITTPIQQKYLAKLL 1002
>ref|XP_011468582.1| PREDICTED: uncharacterized protein LOC101308702 [Fragaria vesca
subsp. vesca]
Length = 1046
Score = 58.5 bits (140), Expect(2) = 3e-10
Identities = 29/59 (49%), Positives = 41/59 (69%)
Frame = +3
Query: 3 GIRAVLMQGKRPLAFINKSIEAKSL*MSIYEKELLALVTAMIK*RLYLESHHFIIKIDH 179
GI AVL QG P+AF++K++ + L +S+Y+KE+LA+V A+ R YL HHF I DH
Sbjct: 839 GIGAVLSQGGHPIAFMSKALAQRHLALSVYDKEMLAVVAAVQHWRPYLLGHHFQILTDH 897
Score = 32.3 bits (72), Expect(2) = 3e-10
Identities = 13/18 (72%), Positives = 16/18 (88%)
Frame = +2
Query: 185 LEQRITTPLRQKWLTKLL 238
L+QRITTP +QKWL KL+
Sbjct: 904 LKQRITTPAQQKWLVKLI 921
>ref|XP_011100536.1| PREDICTED: LOW QUALITY PROTEIN: uncharacterized protein
LOC105178703 [Sesamum indicum]
Length = 966
Score = 62.4 bits (150), Expect(2) = 4e-10
Identities = 30/58 (51%), Positives = 43/58 (74%)
Frame = +3
Query: 3 GIRAVLMQGKRPLAFINKSIEAKSL*MSIYEKELLALVTAMIK*RLYLESHHFIIKID 176
GI VLMQ RP+A+++K++ K+L +S YEKE LAL+ A+ K + YL+ HHFII+ D
Sbjct: 784 GIGPVLMQEGRPIAYLSKALAPKNLGLSTYEKEFLALLLAVTKWKHYLQGHHFIIRTD 841
Score = 28.1 bits (61), Expect(2) = 4e-10
Identities = 10/19 (52%), Positives = 17/19 (89%)
Frame = +2
Query: 182 LLEQRITTPLRQKWLTKLL 238
+L+QR+ + L+Q+W+TKLL
Sbjct: 848 ILDQRVDSVLQQRWVTKLL 866
>emb|CAN80491.1| hypothetical protein VITISV_042679 [Vitis vinifera]
Length = 1412
Score = 56.6 bits (135), Expect(2) = 6e-10
Identities = 28/59 (47%), Positives = 40/59 (67%)
Frame = +3
Query: 3 GIRAVLMQGKRPLAFINKSIEAKSL*MSIYEKELLALVTAMIK*RLYLESHHFIIKIDH 179
GI AVLMQ P+A+I+K++ + +S YEKE+LA++ A+ K YL HF+IK DH
Sbjct: 867 GIGAVLMQEGHPIAYISKALSDRFQTLSTYEKEMLAILMAIKKWESYLVDRHFVIKTDH 925
Score = 33.5 bits (75), Expect(2) = 6e-10
Identities = 13/25 (52%), Positives = 18/25 (72%)
Frame = +2
Query: 164 H*DRSFLLEQRITTPLRQKWLTKLL 238
H +LLEQR+TTP +Q W+ KL+
Sbjct: 925 HQSLKYLLEQRVTTPTQQAWVAKLM 949
>emb|CAN80132.1| hypothetical protein VITISV_012031 [Vitis vinifera]
Length = 1371
Score = 56.6 bits (135), Expect(2) = 6e-10
Identities = 28/59 (47%), Positives = 40/59 (67%)
Frame = +3
Query: 3 GIRAVLMQGKRPLAFINKSIEAKSL*MSIYEKELLALVTAMIK*RLYLESHHFIIKIDH 179
GI AVLMQ P+A+I+K++ + +S YEKE+LA++ A+ K YL HF+IK DH
Sbjct: 884 GIGAVLMQEGHPIAYISKALSDRFQTLSTYEKEMLAILMAIKKWESYLVDRHFVIKTDH 942
Score = 33.5 bits (75), Expect(2) = 6e-10
Identities = 13/25 (52%), Positives = 18/25 (72%)
Frame = +2
Query: 164 H*DRSFLLEQRITTPLRQKWLTKLL 238
H +LLEQR+TTP +Q W+ KL+
Sbjct: 942 HQSLKYLLEQRVTTPTQQAWVAKLM 966
>ref|XP_004293097.1| PREDICTED: retrovirus-related Pol polyprotein from transposon 297
[Fragaria vesca subsp. vesca]
Length = 1570
Score = 57.8 bits (138), Expect(2) = 7e-10
Identities = 29/59 (49%), Positives = 42/59 (71%)
Frame = +3
Query: 3 GIRAVLMQGKRPLAFINKSIEAKSL*MSIYEKELLALVTAMIK*RLYLESHHFIIKIDH 179
GI AVL Q P+AF++K++ K L +S+Y+KE+LA+V+A+ + R YL HHF I DH
Sbjct: 1201 GIGAVLSQEGHPIAFMSKALAQKHLALSVYDKEMLAVVSAVQQWRPYLLGHHFKILTDH 1259
Score = 32.0 bits (71), Expect(2) = 7e-10
Identities = 12/20 (60%), Positives = 17/20 (85%)
Frame = +2
Query: 179 FLLEQRITTPLRQKWLTKLL 238
+ L+Q+ITTP +QKWL KL+
Sbjct: 1264 YFLKQKITTPAQQKWLIKLM 1283
>gb|ACB28472.1| polyprotein [Ananas comosus]
Length = 953
Score = 56.6 bits (135), Expect(2) = 7e-10
Identities = 28/59 (47%), Positives = 41/59 (69%)
Frame = +3
Query: 3 GIRAVLMQGKRPLAFINKSIEAKSL*MSIYEKELLALVTAMIK*RLYLESHHFIIKIDH 179
G+ AVL+Q RP+AF++K + ++ +S YE+E+LA+V A+ K R YL HF IK DH
Sbjct: 534 GVGAVLLQKGRPIAFMSKPLSPRNRQLSTYEREMLAIVIAVQKWRPYLIGRHFKIKTDH 592
Score = 33.1 bits (74), Expect(2) = 7e-10
Identities = 12/25 (48%), Positives = 19/25 (76%)
Frame = +2
Query: 164 H*DRSFLLEQRITTPLRQKWLTKLL 238
H +L+EQR++TP +QKW+ KL+
Sbjct: 592 HQSLKYLMEQRVSTPSQQKWVAKLM 616
>gb|ABA93839.1| retrotransposon protein, putative, unclassified [Oryza sativa
Japonica Group]
Length = 852
Score = 58.2 bits (139), Expect(2) = 1e-09
Identities = 28/59 (47%), Positives = 43/59 (72%)
Frame = +3
Query: 3 GIRAVLMQGKRPLAFINKSIEAKSL*MSIYEKELLALVTAMIK*RLYLESHHFIIKIDH 179
GI AVLMQ + PLAF++K++ ++ +S YEKE LA++ A+ + R YL+ F+I+IDH
Sbjct: 696 GIGAVLMQDQHPLAFLSKALGPRTQSLSTYEKESLAIILAVEQWRSYLQHDEFVIRIDH 754
Score = 30.8 bits (68), Expect(2) = 1e-09
Identities = 15/27 (55%), Positives = 20/27 (74%)
Frame = +2
Query: 158 LHH*DRSFLLEQRITTPLRQKWLTKLL 238
+ H SFL +QR++TP +QK LTKLL
Sbjct: 752 IDHRSLSFLDDQRLSTPWQQKALTKLL 778
>emb|CAN60890.1| hypothetical protein VITISV_011880 [Vitis vinifera]
Length = 1378
Score = 55.1 bits (131), Expect(2) = 2e-09
Identities = 27/59 (45%), Positives = 39/59 (66%)
Frame = +3
Query: 3 GIRAVLMQGKRPLAFINKSIEAKSL*MSIYEKELLALVTAMIK*RLYLESHHFIIKIDH 179
GI VLMQ P+A+I+K++ + +S YEKE+LA++ A+ K YL HF+IK DH
Sbjct: 824 GIGVVLMQEGHPIAYISKALSDRFQTLSTYEKEMLAILMAIKKWESYLVDRHFVIKTDH 882
Score = 33.5 bits (75), Expect(2) = 2e-09
Identities = 13/25 (52%), Positives = 18/25 (72%)
Frame = +2
Query: 164 H*DRSFLLEQRITTPLRQKWLTKLL 238
H +LLEQR+TTP +Q W+ KL+
Sbjct: 882 HQSLKYLLEQRVTTPTQQAWVAKLM 906
>ref|XP_010418845.1| PREDICTED: uncharacterized protein LOC104704456 [Camelina sativa]
Length = 984
Score = 62.8 bits (151), Expect(2) = 8e-09
Identities = 33/58 (56%), Positives = 43/58 (74%)
Frame = +3
Query: 3 GIRAVLMQGKRPLAFINKSIEAKSL*MSIYEKELLALVTAMIK*RLYLESHHFIIKID 176
GI AVLMQ PLAFIN+ ++ + L +SIY+KELLA+V A+ K R YL +HF+IK D
Sbjct: 908 GIGAVLMQEDHPLAFINRHLKGRQLNLSIYKKELLAVVFAVQKWRHYLLPNHFVIKTD 965
Score = 23.5 bits (49), Expect(2) = 8e-09
Identities = 8/14 (57%), Positives = 13/14 (92%)
Frame = +2
Query: 179 FLLEQRITTPLRQK 220
+LLEQR+ TP++Q+
Sbjct: 971 YLLEQRLNTPIQQQ 984
>emb|CAJ86299.1| H0124B04.16 [Oryza sativa Indica Group]
Length = 1265
Score = 53.9 bits (128), Expect(2) = 1e-08
Identities = 26/59 (44%), Positives = 40/59 (67%)
Frame = +3
Query: 3 GIRAVLMQGKRPLAFINKSIEAKSL*MSIYEKELLALVTAMIK*RLYLESHHFIIKIDH 179
GI AVLMQ P+AF++K++ ++ +S YEKE LA++ A+ R YL+ F+I+ DH
Sbjct: 952 GIGAVLMQNSHPIAFLSKALGPRTQGLSTYEKESLAIMLAIDHWRSYLQHDEFVIRTDH 1010
Score = 32.0 bits (71), Expect(2) = 1e-08
Identities = 15/25 (60%), Positives = 19/25 (76%)
Frame = +2
Query: 164 H*DRSFLLEQRITTPLRQKWLTKLL 238
H SFL+ QR++TP +QK LTKLL
Sbjct: 1010 HRSLSFLINQRLSTPWQQKALTKLL 1034
>ref|XP_006356750.1| PREDICTED: uncharacterized protein LOC102604101 [Solanum tuberosum]
Length = 1051
Score = 55.5 bits (132), Expect(2) = 1e-08
Identities = 26/60 (43%), Positives = 40/60 (66%)
Frame = +3
Query: 3 GIRAVLMQGKRPLAFINKSIEAKSL*MSIYEKELLALVTAMIK*RLYLESHHFIIKIDHF 182
GI AVL+Q K+P+AF ++ + + + YEKEL+ LV A+ + R YL HFI++ DH+
Sbjct: 822 GIGAVLLQNKQPIAFFSRVLARRHQPLPAYEKELIGLVKAIRQWRSYLWGQHFIVRTDHY 881
Score = 30.0 bits (66), Expect(2) = 1e-08
Identities = 13/25 (52%), Positives = 16/25 (64%)
Frame = +2
Query: 164 H*DRSFLLEQRITTPLRQKWLTKLL 238
H FLLEQ+ TP +Q WL K+L
Sbjct: 880 HYSLKFLLEQKALTPPQQHWLAKIL 904