BLASTX nr result
ID: Forsythia22_contig00037236
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Forsythia22_contig00037236
(363 letters)
Database: ./nr
69,698,275 sequences; 24,982,196,650 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
emb|CAN69397.1| hypothetical protein VITISV_021035 [Vitis vinifera] 145 3e-35
emb|CAN83735.1| hypothetical protein VITISV_000740 [Vitis vinifera] 143 1e-34
gb|ADJ18449.1| gag/pol protein [Bryonia dioica] 135 2e-32
emb|CAN77149.1| hypothetical protein VITISV_019364 [Vitis vinifera] 133 9e-32
emb|CAN65627.1| hypothetical protein VITISV_032735 [Vitis vinifera] 135 3e-31
emb|CAN64055.1| hypothetical protein VITISV_044406 [Vitis vinifera] 128 4e-30
ref|XP_006471604.1| PREDICTED: leucoanthocyanidin dioxygenase-li... 129 8e-29
dbj|BAA22288.1| polyprotein [Oryza australiensis] 100 1e-20
gb|ABF97047.1| retrotransposon protein, putative, Ty1-copia subc... 97 3e-20
gb|AAP44605.1| putative polyprotein [Oryza sativa Japonica Group] 97 3e-20
gb|AAC26250.1| contains similarity to reverse transcriptase (Pfa... 103 3e-20
gb|AAX94813.1| retrotransposon protein, putative, Ty1-copia sub-... 97 1e-19
gb|EXX50149.1| gag-pol fusion protein [Rhizophagus irregularis D... 102 1e-19
gb|ABG22008.1| retrotransposon protein, putative, Ty1-copia subc... 97 2e-19
ref|XP_008365627.1| PREDICTED: uncharacterized protein LOC103429... 95 4e-19
gb|ABA97342.2| retrotransposon protein, putative, Ty1-copia subc... 97 6e-19
gb|ABF96491.1| retrotransposon protein, putative, Ty1-copia subc... 97 8e-19
gb|AAP03364.1| putative polyprotein [Oryza sativa Japonica Group] 97 8e-19
gb|AAV85747.1| Integrase core domain, putative [Oryza sativa Jap... 93 2e-18
gb|ADB85429.1| putative retrotransposon protein [Phyllostachys e... 97 3e-18
>emb|CAN69397.1| hypothetical protein VITISV_021035 [Vitis vinifera]
Length = 668
Score = 145 bits (365), Expect(2) = 3e-35
Identities = 63/103 (61%), Positives = 83/103 (80%)
Frame = +1
Query: 55 YAIGMISRYQSNPGPENWVAVKHIFMYLRRTRNHMLIYSSPNIVPVGYTDSDFQADKDSH 234
+A+G++SRYQSNPG ++WVAVKHI YLRRTRN+ML+YS ++P+GYTDSDFQ+D+DS
Sbjct: 464 FAVGVVSRYQSNPGLDHWVAVKHILKYLRRTRNYMLVYSGRELIPIGYTDSDFQSDRDSR 523
Query: 235 KXXXXXXXXXXXXAIIWKNIKQSCIADSTIEAEYVASCEATKE 363
K AIIW+++KQ+C+ADST+EAEYVA+CEA KE
Sbjct: 524 KSTSEAVFTLGGGAIIWRSVKQTCVADSTMEAEYVAACEAAKE 566
Score = 30.0 bits (66), Expect(2) = 3e-35
Identities = 14/18 (77%), Positives = 14/18 (77%)
Frame = +2
Query: 2 SEVSSLMCAMLCTRLDIC 55
S V SLM AMLCTR DIC
Sbjct: 446 SAVGSLMYAMLCTRPDIC 463
>emb|CAN83735.1| hypothetical protein VITISV_000740 [Vitis vinifera]
Length = 230
Score = 143 bits (360), Expect(2) = 1e-34
Identities = 62/103 (60%), Positives = 81/103 (78%)
Frame = +1
Query: 55 YAIGMISRYQSNPGPENWVAVKHIFMYLRRTRNHMLIYSSPNIVPVGYTDSDFQADKDSH 234
+A+G++SRYQSNPG + WVAVKHI YLRRTRN+ML+YS ++P+GYTDSDFQ+D+DS
Sbjct: 26 FAVGVVSRYQSNPGLDQWVAVKHILKYLRRTRNYMLVYSGRELIPIGYTDSDFQSDRDSR 85
Query: 235 KXXXXXXXXXXXXAIIWKNIKQSCIADSTIEAEYVASCEATKE 363
K AIIW+++KQ+C+ DST+EAEYVA+CEA KE
Sbjct: 86 KSTSRAVFTLGGGAIIWRSVKQTCVVDSTMEAEYVAACEAAKE 128
Score = 30.0 bits (66), Expect(2) = 1e-34
Identities = 14/18 (77%), Positives = 14/18 (77%)
Frame = +2
Query: 2 SEVSSLMCAMLCTRLDIC 55
S V SLM AMLCTR DIC
Sbjct: 8 SAVGSLMYAMLCTRPDIC 25
>gb|ADJ18449.1| gag/pol protein [Bryonia dioica]
Length = 1292
Score = 135 bits (341), Expect(2) = 2e-32
Identities = 58/103 (56%), Positives = 81/103 (78%)
Frame = +1
Query: 55 YAIGMISRYQSNPGPENWVAVKHIFMYLRRTRNHMLIYSSPNIVPVGYTDSDFQADKDSH 234
Y++G++SRYQSNPG ++W AVK+I YLRRTRN+ML+Y + +++ GYTDSDFQ+DKD+
Sbjct: 1124 YSVGIVSRYQSNPGRDHWTAVKNILKYLRRTRNYMLVYGAKDLILTGYTDSDFQSDKDAR 1183
Query: 235 KXXXXXXXXXXXXAIIWKNIKQSCIADSTIEAEYVASCEATKE 363
K A++W+++KQ+CIADST+EAEYVA+CEA KE
Sbjct: 1184 KSTSGSVFTLNGGAVVWRSVKQTCIADSTMEAEYVAACEAAKE 1226
Score = 30.0 bits (66), Expect(2) = 2e-32
Identities = 14/18 (77%), Positives = 14/18 (77%)
Frame = +2
Query: 2 SEVSSLMCAMLCTRLDIC 55
S V SLM AMLCTR DIC
Sbjct: 1106 SAVGSLMYAMLCTRPDIC 1123
>emb|CAN77149.1| hypothetical protein VITISV_019364 [Vitis vinifera]
Length = 1544
Score = 133 bits (335), Expect(2) = 9e-32
Identities = 59/103 (57%), Positives = 80/103 (77%)
Frame = +1
Query: 55 YAIGMISRYQSNPGPENWVAVKHIFMYLRRTRNHMLIYSSPNIVPVGYTDSDFQADKDSH 234
+A+GM+SR+Q NPG E+W AVKHI YL+RTR++ML++ S N+VP+GYTDSDFQ+D+DS
Sbjct: 1340 FAVGMVSRFQFNPGREHWTAVKHIIKYLKRTRDYMLVFQSENLVPIGYTDSDFQSDQDSR 1399
Query: 235 KXXXXXXXXXXXXAIIWKNIKQSCIADSTIEAEYVASCEATKE 363
K AI W++IKQ+C+ADST+EA+YVA+ EA KE
Sbjct: 1400 KSTSGNVFVLGSGAISWRSIKQTCVADSTMEAKYVAASEAAKE 1442
Score = 30.0 bits (66), Expect(2) = 9e-32
Identities = 14/18 (77%), Positives = 14/18 (77%)
Frame = +2
Query: 2 SEVSSLMCAMLCTRLDIC 55
S V SLM AMLCTR DIC
Sbjct: 1322 SAVGSLMYAMLCTRPDIC 1339
>emb|CAN65627.1| hypothetical protein VITISV_032735 [Vitis vinifera]
Length = 1285
Score = 135 bits (339), Expect(2) = 3e-31
Identities = 60/103 (58%), Positives = 80/103 (77%)
Frame = +1
Query: 55 YAIGMISRYQSNPGPENWVAVKHIFMYLRRTRNHMLIYSSPNIVPVGYTDSDFQADKDSH 234
+A+GM+SR+QSNPG E+W AVKHI YL+RTR++ML++ S N+VP+GYTDSDFQ+D+DS
Sbjct: 1081 FAVGMVSRFQSNPGREHWTAVKHIIKYLKRTRDYMLVFQSENLVPIGYTDSDFQSDQDSR 1140
Query: 235 KXXXXXXXXXXXXAIIWKNIKQSCIADSTIEAEYVASCEATKE 363
K AI W++IKQ+C+AD T+EAEYVA+ EA KE
Sbjct: 1141 KSTSGNVFVLGGGAISWRSIKQTCVADFTMEAEYVAASEAAKE 1183
Score = 26.6 bits (57), Expect(2) = 3e-31
Identities = 13/17 (76%), Positives = 13/17 (76%)
Frame = +2
Query: 2 SEVSSLMCAMLCTRLDI 52
S V SLM AMLCTR DI
Sbjct: 1063 SAVGSLMYAMLCTRPDI 1079
>emb|CAN64055.1| hypothetical protein VITISV_044406 [Vitis vinifera]
Length = 633
Score = 128 bits (321), Expect(2) = 4e-30
Identities = 59/103 (57%), Positives = 79/103 (76%)
Frame = +1
Query: 55 YAIGMISRYQSNPGPENWVAVKHIFMYLRRTRNHMLIYSSPNIVPVGYTDSDFQADKDSH 234
+A+GM+SR+QSN G E+W AVKHI YL+RTR++ML++ S N+ P+GYTDSDFQ+D+DS
Sbjct: 429 FAVGMVSRFQSNXGREHWXAVKHIIKYLKRTRDYMLVFQSENLXPIGYTDSDFQSDQDSR 488
Query: 235 KXXXXXXXXXXXXAIIWKNIKQSCIADSTIEAEYVASCEATKE 363
K AI W++IKQ+ +ADST+EAEYVA+ EA KE
Sbjct: 489 KSTSGNVFXLGGGAISWRSIKQTXVADSTMEAEYVAASEAAKE 531
Score = 30.0 bits (66), Expect(2) = 4e-30
Identities = 14/18 (77%), Positives = 14/18 (77%)
Frame = +2
Query: 2 SEVSSLMCAMLCTRLDIC 55
S V SLM AMLCTR DIC
Sbjct: 411 SAVGSLMYAMLCTRPDIC 428
>ref|XP_006471604.1| PREDICTED: leucoanthocyanidin dioxygenase-like [Citrus sinensis]
Length = 629
Score = 129 bits (324), Expect(2) = 8e-29
Identities = 57/103 (55%), Positives = 75/103 (72%)
Frame = +1
Query: 55 YAIGMISRYQSNPGPENWVAVKHIFMYLRRTRNHMLIYSSPNIVPVGYTDSDFQADKDSH 234
+A+G++SRYQ NPGP+ W A+KHI YL+RT+N+ML+Y ++PVGYTDSDF +D+DS
Sbjct: 485 FAVGIVSRYQFNPGPQYWTAIKHIIKYLKRTKNYMLMYFGDELIPVGYTDSDFMSDRDSG 544
Query: 235 KXXXXXXXXXXXXAIIWKNIKQSCIADSTIEAEYVASCEATKE 363
K AI W+++KQSCIADST EAEYV + EA KE
Sbjct: 545 KSTSGYVFALGSGAISWRSVKQSCIADSTTEAEYVVASEAAKE 587
Score = 24.3 bits (51), Expect(2) = 8e-29
Identities = 11/15 (73%), Positives = 12/15 (80%)
Frame = +2
Query: 8 VSSLMCAMLCTRLDI 52
+ SLM AMLCTR DI
Sbjct: 469 MGSLMYAMLCTRPDI 483
>dbj|BAA22288.1| polyprotein [Oryza australiensis]
Length = 1317
Score = 100 bits (249), Expect(2) = 1e-20
Identities = 49/104 (47%), Positives = 66/104 (63%), Gaps = 1/104 (0%)
Frame = +1
Query: 55 YAIGMISRYQSNPGPENWVAVKHIFMYLRRTRNHMLIYSSP-NIVPVGYTDSDFQADKDS 231
YA+ SRYQS+PG +W AVK+I YLRRT++ L+Y ++V GYTD+ FQ DKD
Sbjct: 1114 YALSATSRYQSDPGEGHWTAVKNILKYLRRTKDMFLVYGGEEDLVVSGYTDASFQTDKDD 1173
Query: 232 HKXXXXXXXXXXXXAIIWKNIKQSCIADSTIEAEYVASCEATKE 363
++ A+ WK+ KQ +ADST EAEY+A+ EA KE
Sbjct: 1174 YRSQSGFVFCLNGGAVSWKSSKQDTVADSTTEAEYIAASEAAKE 1217
Score = 25.4 bits (54), Expect(2) = 1e-20
Identities = 11/21 (52%), Positives = 14/21 (66%)
Frame = +2
Query: 2 SEVSSLMCAMLCTRLDICMLL 64
S + S+M AMLCTR D+ L
Sbjct: 1096 SAIGSIMYAMLCTRPDVSYAL 1116
>gb|ABF97047.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
Japonica Group]
Length = 1248
Score = 96.7 bits (239), Expect(2) = 3e-20
Identities = 48/104 (46%), Positives = 64/104 (61%), Gaps = 1/104 (0%)
Frame = +1
Query: 55 YAIGMISRYQSNPGPENWVAVKHIFMYLRRTRNHMLIYS-SPNIVPVGYTDSDFQADKDS 231
YA+ SRYQS+ G +W+AVK+I YLRRT++ L+Y +V GYTD+ FQ DKD
Sbjct: 1063 YALSATSRYQSDLGESHWIAVKNILKYLRRTKDMFLVYGRQEELVVNGYTDASFQTDKDD 1122
Query: 232 HKXXXXXXXXXXXXAIIWKNIKQSCIADSTIEAEYVASCEATKE 363
+ A+ WK+ KQ +ADST EAEY+A+ EA KE
Sbjct: 1123 FRSQSGFVFCLNGGAVSWKSSKQDTVADSTTEAEYIAASEAAKE 1166
Score = 28.1 bits (61), Expect(2) = 3e-20
Identities = 12/21 (57%), Positives = 15/21 (71%)
Frame = +2
Query: 2 SEVSSLMCAMLCTRLDICMLL 64
S + S+M AMLCTRLD+ L
Sbjct: 1045 SAIGSIMYAMLCTRLDVSYAL 1065
>gb|AAP44605.1| putative polyprotein [Oryza sativa Japonica Group]
Length = 1161
Score = 96.7 bits (239), Expect(2) = 3e-20
Identities = 48/104 (46%), Positives = 64/104 (61%), Gaps = 1/104 (0%)
Frame = +1
Query: 55 YAIGMISRYQSNPGPENWVAVKHIFMYLRRTRNHMLIYS-SPNIVPVGYTDSDFQADKDS 231
YA+ SRYQS+ G +W+AVK+I YLRRT++ L+Y +V GYTD+ FQ DKD
Sbjct: 976 YALSATSRYQSDLGESHWIAVKNILKYLRRTKDMFLVYGRQEELVVNGYTDASFQTDKDD 1035
Query: 232 HKXXXXXXXXXXXXAIIWKNIKQSCIADSTIEAEYVASCEATKE 363
+ A+ WK+ KQ +ADST EAEY+A+ EA KE
Sbjct: 1036 FRSQSGFVFCLNGGAVSWKSSKQDTVADSTTEAEYIAASEAAKE 1079
Score = 28.1 bits (61), Expect(2) = 3e-20
Identities = 12/21 (57%), Positives = 15/21 (71%)
Frame = +2
Query: 2 SEVSSLMCAMLCTRLDICMLL 64
S + S+M AMLCTRLD+ L
Sbjct: 958 SAIGSIMYAMLCTRLDVSYAL 978
>gb|AAC26250.1| contains similarity to reverse transcriptase (Pfam: rvt.hmm, score
19.29) [Arabidopsis thaliana] gi|7267136|emb|CAB80804.1|
putative retrotransposon protein [Arabidopsis thaliana]
Length = 964
Score = 103 bits (258), Expect = 3e-20
Identities = 50/103 (48%), Positives = 67/103 (65%), Gaps = 1/103 (0%)
Frame = +1
Query: 58 AIGMISRYQSNPGPENWVAVKHIFMYLRRTRNHMLIYS-SPNIVPVGYTDSDFQADKDSH 234
A+ M SRYQS+PG +W+ V++IF YLRRT++ L+Y S +V GYTD+ FQ DKD
Sbjct: 762 ALSMTSRYQSDPGESHWIVVRNIFKYLRRTKDKFLVYGGSEELVVSGYTDASFQTDKDDF 821
Query: 235 KXXXXXXXXXXXXAIIWKNIKQSCIADSTIEAEYVASCEATKE 363
+ A+ WK+ KQS +ADST EAEY+A+ EA KE
Sbjct: 822 RSQSGFFFCLNGGAVSWKSTKQSTVADSTTEAEYIAASEAAKE 864
>gb|AAX94813.1| retrotransposon protein, putative, Ty1-copia sub-class [Oryza sativa
Japonica Group] gi|77550379|gb|ABA93176.1|
retrotransposon protein, putative, Ty1-copia subclass
[Oryza sativa Japonica Group]
Length = 938
Score = 97.4 bits (241), Expect(2) = 1e-19
Identities = 47/104 (45%), Positives = 65/104 (62%), Gaps = 1/104 (0%)
Frame = +1
Query: 55 YAIGMISRYQSNPGPENWVAVKHIFMYLRRTRNHMLIYSSPN-IVPVGYTDSDFQADKDS 231
YA+ S+YQS+PG +W+A+K+I YLRRT++ L+Y +V GYTD+ FQ DKD
Sbjct: 833 YALSATSQYQSDPGESHWIALKNILKYLRRTKDMFLVYGGQEELVVNGYTDASFQIDKDD 892
Query: 232 HKXXXXXXXXXXXXAIIWKNIKQSCIADSTIEAEYVASCEATKE 363
+ A+ WK+ KQ +ADST EAEY+A+ EA KE
Sbjct: 893 FRSQSGFVFYLNGGAVSWKSSKQDTVADSTTEAEYIAASEAAKE 936
Score = 25.4 bits (54), Expect(2) = 1e-19
Identities = 11/21 (52%), Positives = 14/21 (66%)
Frame = +2
Query: 2 SEVSSLMCAMLCTRLDICMLL 64
S + S+M AMLCTR D+ L
Sbjct: 815 SAIGSIMYAMLCTRPDVSYAL 835
>gb|EXX50149.1| gag-pol fusion protein [Rhizophagus irregularis DAOM 197198w]
Length = 1303
Score = 102 bits (253), Expect = 1e-19
Identities = 48/104 (46%), Positives = 69/104 (66%), Gaps = 1/104 (0%)
Frame = +1
Query: 55 YAIGMISRYQSNPGPENWVAVKHIFMYLRRTRNHMLIYSSPNIVPV-GYTDSDFQADKDS 231
+A+ M+SRYQ NPG +W+AVK+I YLRRT+N +L+ + + V GYTD+ FQ D+DS
Sbjct: 1097 FALSMVSRYQGNPGRAHWIAVKNILKYLRRTKNMVLVLGGSDTLRVEGYTDASFQTDRDS 1156
Query: 232 HKXXXXXXXXXXXXAIIWKNIKQSCIADSTIEAEYVASCEATKE 363
+ A+ WK+ KQ +ADST E+EY+A+ EA+KE
Sbjct: 1157 GRSQSGWVFLLNGGAVTWKSSKQETVADSTCESEYIAASEASKE 1200
>gb|ABG22008.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
Japonica Group]
Length = 932
Score = 97.1 bits (240), Expect(2) = 2e-19
Identities = 48/104 (46%), Positives = 64/104 (61%), Gaps = 1/104 (0%)
Frame = +1
Query: 55 YAIGMISRYQSNPGPENWVAVKHIFMYLRRTRNHMLIYSSPN-IVPVGYTDSDFQADKDS 231
YA+ S+YQS+PG +W+AVK+I YLRRT++ LIY +V YTD+ FQ DKD
Sbjct: 738 YALSATSQYQSDPGESHWIAVKNILKYLRRTKDMFLIYGGQEELVVNNYTDASFQTDKDD 797
Query: 232 HKXXXXXXXXXXXXAIIWKNIKQSCIADSTIEAEYVASCEATKE 363
+ A+ WK+ KQ +ADST EAEY+A+ EA KE
Sbjct: 798 FRSQSGFVFCLNGGAVSWKSSKQDTVADSTTEAEYIAASEAAKE 841
Score = 25.0 bits (53), Expect(2) = 2e-19
Identities = 10/17 (58%), Positives = 13/17 (76%)
Frame = +2
Query: 2 SEVSSLMCAMLCTRLDI 52
S + S+M AMLCTR D+
Sbjct: 720 SAIGSIMYAMLCTRPDV 736
>ref|XP_008365627.1| PREDICTED: uncharacterized protein LOC103429259 [Malus domestica]
Length = 281
Score = 95.1 bits (235), Expect(2) = 4e-19
Identities = 48/104 (46%), Positives = 64/104 (61%), Gaps = 1/104 (0%)
Frame = +1
Query: 55 YAIGMISRYQSNPGPENWVAVKHIFMYLRRTRNHMLIY-SSPNIVPVGYTDSDFQADKDS 231
YA+ + SRYQSNPG E+W AVK + YLRRT++ L+Y + ++ YTD+DFQ+D D
Sbjct: 26 YAVSITSRYQSNPGXEHWAAVKTVLKYLRRTKDMFLVYGGAAELLVEAYTDADFQSDIDD 85
Query: 232 HKXXXXXXXXXXXXAIIWKNIKQSCIADSTIEAEYVASCEATKE 363
A+ WK+ KQS IADST EYVA+ +A KE
Sbjct: 86 RSSNSGYVFTLNGGAVSWKSKKQSVIADSTTXXEYVAAAKAGKE 129
Score = 26.2 bits (56), Expect(2) = 4e-19
Identities = 11/17 (64%), Positives = 13/17 (76%)
Frame = +2
Query: 2 SEVSSLMCAMLCTRLDI 52
S + SLM AM+CTR DI
Sbjct: 8 SAIGSLMYAMICTRXDI 24
>gb|ABA97342.2| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
Japonica Group]
Length = 1050
Score = 97.1 bits (240), Expect(2) = 6e-19
Identities = 47/104 (45%), Positives = 63/104 (60%), Gaps = 1/104 (0%)
Frame = +1
Query: 55 YAIGMISRYQSNPGPENWVAVKHIFMYLRRTRNHMLIYSSPN-IVPVGYTDSDFQADKDS 231
YA+ SRYQS+PG +W+AVK+I YLRRT++ L+Y +V GYTD+ FQ DKD
Sbjct: 848 YALSATSRYQSDPGESHWIAVKNILKYLRRTKDMFLVYGGQEELVVKGYTDASFQTDKDD 907
Query: 232 HKXXXXXXXXXXXXAIIWKNIKQSCIADSTIEAEYVASCEATKE 363
+ A+ WK+ KQ + DS EAEY+A+ EA KE
Sbjct: 908 FRSQSGFVFCLNGGAVSWKSSKQDTVVDSITEAEYIAASEAAKE 951
Score = 23.5 bits (49), Expect(2) = 6e-19
Identities = 10/21 (47%), Positives = 13/21 (61%)
Frame = +2
Query: 2 SEVSSLMCAMLCTRLDICMLL 64
S + S+M AMLCT D+ L
Sbjct: 830 SAIGSIMYAMLCTHPDVSYAL 850
>gb|ABF96491.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
Japonica Group]
Length = 767
Score = 96.7 bits (239), Expect(2) = 8e-19
Identities = 47/104 (45%), Positives = 64/104 (61%), Gaps = 1/104 (0%)
Frame = +1
Query: 55 YAIGMISRYQSNPGPENWVAVKHIFMYLRRTRNHMLIYSSPN-IVPVGYTDSDFQADKDS 231
YA+ SRYQ +PG +W+AVK+I YLRRT++ L+Y +V GYTD+ FQ DKD
Sbjct: 588 YALSATSRYQLDPGESHWIAVKNILKYLRRTKDMFLVYGGQEELVVNGYTDASFQTDKDD 647
Query: 232 HKXXXXXXXXXXXXAIIWKNIKQSCIADSTIEAEYVASCEATKE 363
+ A+ WK+ KQ +ADST EAEY+A+ EA K+
Sbjct: 648 FRSQSKFVFCLNGGAVSWKSSKQDTVADSTTEAEYIAASEAAKK 691
Score = 23.5 bits (49), Expect(2) = 8e-19
Identities = 10/21 (47%), Positives = 13/21 (61%)
Frame = +2
Query: 2 SEVSSLMCAMLCTRLDICMLL 64
S + +M AMLCTR D+ L
Sbjct: 570 SAIGCIMYAMLCTRPDVSYAL 590
>gb|AAP03364.1| putative polyprotein [Oryza sativa Japonica Group]
Length = 657
Score = 96.7 bits (239), Expect(2) = 8e-19
Identities = 47/104 (45%), Positives = 64/104 (61%), Gaps = 1/104 (0%)
Frame = +1
Query: 55 YAIGMISRYQSNPGPENWVAVKHIFMYLRRTRNHMLIYSSPN-IVPVGYTDSDFQADKDS 231
YA+ SRYQ +PG +W+AVK+I YLRRT++ L+Y +V GYTD+ FQ DKD
Sbjct: 478 YALSATSRYQLDPGESHWIAVKNILKYLRRTKDMFLVYGGQEELVVNGYTDASFQTDKDD 537
Query: 232 HKXXXXXXXXXXXXAIIWKNIKQSCIADSTIEAEYVASCEATKE 363
+ A+ WK+ KQ +ADST EAEY+A+ EA K+
Sbjct: 538 FRSQSKFVFCLNGGAVSWKSSKQDTVADSTTEAEYIAASEAAKK 581
Score = 23.5 bits (49), Expect(2) = 8e-19
Identities = 10/21 (47%), Positives = 13/21 (61%)
Frame = +2
Query: 2 SEVSSLMCAMLCTRLDICMLL 64
S + +M AMLCTR D+ L
Sbjct: 460 SAIGCIMYAMLCTRPDVSYAL 480
>gb|AAV85747.1| Integrase core domain, putative [Oryza sativa Japonica Group]
gi|62701883|gb|AAX92956.1| retrotransposon protein,
putative, Ty1-copia sub-class [Oryza sativa Japonica
Group] gi|108864259|gb|ABA92827.2| retrotransposon
protein, putative, Ty1-copia subclass [Oryza sativa
Japonica Group]
Length = 1184
Score = 93.2 bits (230), Expect(2) = 2e-18
Identities = 46/101 (45%), Positives = 61/101 (60%), Gaps = 1/101 (0%)
Frame = +1
Query: 55 YAIGMISRYQSNPGPENWVAVKHIFMYLRRTRNHMLIYSSPN-IVPVGYTDSDFQADKDS 231
YA+ SRYQS+PG +W+AVK+I YLRRT++ L Y +V GYTD+ FQ DKD
Sbjct: 985 YALSATSRYQSDPGESHWIAVKNILKYLRRTKDMFLAYGGQEELVVNGYTDASFQIDKDD 1044
Query: 232 HKXXXXXXXXXXXXAIIWKNIKQSCIADSTIEAEYVASCEA 354
+ A+ WK+ KQ + DST EAEY+A+ EA
Sbjct: 1045 FRSQSGFVFCLNGGAVSWKSSKQDIVVDSTTEAEYIAASEA 1085
Score = 25.4 bits (54), Expect(2) = 2e-18
Identities = 11/21 (52%), Positives = 14/21 (66%)
Frame = +2
Query: 2 SEVSSLMCAMLCTRLDICMLL 64
S + S+M AMLCTR D+ L
Sbjct: 967 SAIGSIMYAMLCTRPDVSYAL 987
>gb|ADB85429.1| putative retrotransposon protein [Phyllostachys edulis]
Length = 1313
Score = 97.4 bits (241), Expect = 3e-18
Identities = 48/104 (46%), Positives = 66/104 (63%), Gaps = 1/104 (0%)
Frame = +1
Query: 55 YAIGMISRYQSNPGPENWVAVKHIFMYLRRTRNHMLIYSSPN-IVPVGYTDSDFQADKDS 231
YA+ + SRYQ++PG +W AVK+I YLRRT++ LIY +V GYTD+ FQ DKD
Sbjct: 1110 YALSVTSRYQADPGECHWTAVKNILKYLRRTKDAFLIYGGDEELVVNGYTDASFQTDKDD 1169
Query: 232 HKXXXXXXXXXXXXAIIWKNIKQSCIADSTIEAEYVASCEATKE 363
++ A+ WK+ KQ +ADST +AEY+A+ EA KE
Sbjct: 1170 YRSQSGFVFILNGGAVSWKSSKQETVADSTTKAEYIAASEAAKE 1213