BLASTX nr result

ID: Forsythia22_contig00036962 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Forsythia22_contig00036962
         (619 letters)

Database: ./nr 
           69,698,275 sequences; 24,982,196,650 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_011090769.1| PREDICTED: E3 ubiquitin-protein ligase RHF1A...    62   2e-07
ref|XP_012069557.1| PREDICTED: E3 ubiquitin-protein ligase RHF1A...    62   3e-07
ref|XP_007034655.1| RING-H2 group F1A, putative isoform 3 [Theob...    60   1e-06
ref|XP_007034654.1| RING-H2 group F1A, putative isoform 2 [Theob...    60   1e-06
ref|XP_007034653.1| RING-H2 group F1A, putative isoform 1 [Theob...    60   1e-06
ref|XP_002517194.1| protein binding protein, putative [Ricinus c...    59   1e-06
ref|XP_002281045.1| PREDICTED: E3 ubiquitin-protein ligase RHF1A...    58   4e-06
ref|XP_006378404.1| hypothetical protein POPTR_0010s10240g [Popu...    58   4e-06
ref|XP_002314719.2| zinc finger family protein [Populus trichoca...    58   4e-06
ref|XP_004296921.1| PREDICTED: E3 ubiquitin-protein ligase RHF1A...    58   4e-06
ref|XP_011021589.1| PREDICTED: E3 ubiquitin-protein ligase RHF1A...    57   6e-06
ref|XP_011021588.1| PREDICTED: E3 ubiquitin-protein ligase RHF1A...    57   6e-06
ref|XP_009603257.1| PREDICTED: E3 ubiquitin-protein ligase RHF1A...    57   7e-06

>ref|XP_011090769.1| PREDICTED: E3 ubiquitin-protein ligase RHF1A isoform X1 [Sesamum
           indicum]
          Length = 317

 Score = 62.0 bits (149), Expect = 2e-07
 Identities = 38/82 (46%), Positives = 51/82 (62%), Gaps = 1/82 (1%)
 Frame = -1

Query: 481 NESVLELSKGAQREMITGIAGLSRMIERFN-FTSEPTKHYVPLSSYTIGISNSPHVVESF 305
           N+SV ELS+G QREM  GIAG+SRMI+R +  T +     +P+SS T+  SN+   V+  
Sbjct: 218 NDSVKELSRGMQREMSAGIAGISRMIDRLDIITQKRAGVSIPVSSCTLETSNNE--VKGT 275

Query: 304 EDDTIVQSINQNTEETDNYMKS 239
           ED+ IV    QNT ET   + S
Sbjct: 276 EDEIIVHLTKQNTGETSKVLCS 297


>ref|XP_012069557.1| PREDICTED: E3 ubiquitin-protein ligase RHF1A [Jatropha curcas]
           gi|643733184|gb|KDP40131.1| hypothetical protein
           JCGZ_02129 [Jatropha curcas]
          Length = 404

 Score = 61.6 bits (148), Expect = 3e-07
 Identities = 33/77 (42%), Positives = 48/77 (62%)
 Frame = -1

Query: 481 NESVLELSKGAQREMITGIAGLSRMIERFNFTSEPTKHYVPLSSYTIGISNSPHVVESFE 302
           N SV EL KG QREM  GIAG++RMIER +FTS+ T    P+S +  G   +P + +  +
Sbjct: 293 NSSVKELGKGVQREMSAGIAGVARMIERLDFTSKRTGASNPVSGFRAG---APDLSKGIQ 349

Query: 301 DDTIVQSINQNTEETDN 251
           ++ I Q++ +  EE  N
Sbjct: 350 ENIIAQALKREREEIAN 366


>ref|XP_007034655.1| RING-H2 group F1A, putative isoform 3 [Theobroma cacao]
           gi|508713684|gb|EOY05581.1| RING-H2 group F1A, putative
           isoform 3 [Theobroma cacao]
          Length = 432

 Score = 59.7 bits (143), Expect = 1e-06
 Identities = 32/81 (39%), Positives = 49/81 (60%)
 Frame = -1

Query: 481 NESVLELSKGAQREMITGIAGLSRMIERFNFTSEPTKHYVPLSSYTIGISNSPHVVESFE 302
           N SV ELSKG QREM  GIAG+++MIER +  ++     +P+S  T G SN     +  +
Sbjct: 329 NNSVKELSKGVQREMSAGIAGVAKMIERLDIATKRPGASIPVSGGTGGTSNILFKGKGVQ 388

Query: 301 DDTIVQSINQNTEETDNYMKS 239
           ++ I Q +N+N  E ++ + S
Sbjct: 389 ENVIAQGLNKNCAEFNHGLNS 409


>ref|XP_007034654.1| RING-H2 group F1A, putative isoform 2 [Theobroma cacao]
           gi|508713683|gb|EOY05580.1| RING-H2 group F1A, putative
           isoform 2 [Theobroma cacao]
          Length = 364

 Score = 59.7 bits (143), Expect = 1e-06
 Identities = 32/81 (39%), Positives = 49/81 (60%)
 Frame = -1

Query: 481 NESVLELSKGAQREMITGIAGLSRMIERFNFTSEPTKHYVPLSSYTIGISNSPHVVESFE 302
           N SV ELSKG QREM  GIAG+++MIER +  ++     +P+S  T G SN     +  +
Sbjct: 261 NNSVKELSKGVQREMSAGIAGVAKMIERLDIATKRPGASIPVSGGTGGTSNILFKGKGVQ 320

Query: 301 DDTIVQSINQNTEETDNYMKS 239
           ++ I Q +N+N  E ++ + S
Sbjct: 321 ENVIAQGLNKNCAEFNHGLNS 341


>ref|XP_007034653.1| RING-H2 group F1A, putative isoform 1 [Theobroma cacao]
           gi|508713682|gb|EOY05579.1| RING-H2 group F1A, putative
           isoform 1 [Theobroma cacao]
          Length = 407

 Score = 59.7 bits (143), Expect = 1e-06
 Identities = 32/81 (39%), Positives = 49/81 (60%)
 Frame = -1

Query: 481 NESVLELSKGAQREMITGIAGLSRMIERFNFTSEPTKHYVPLSSYTIGISNSPHVVESFE 302
           N SV ELSKG QREM  GIAG+++MIER +  ++     +P+S  T G SN     +  +
Sbjct: 304 NNSVKELSKGVQREMSAGIAGVAKMIERLDIATKRPGASIPVSGGTGGTSNILFKGKGVQ 363

Query: 301 DDTIVQSINQNTEETDNYMKS 239
           ++ I Q +N+N  E ++ + S
Sbjct: 364 ENVIAQGLNKNCAEFNHGLNS 384


>ref|XP_002517194.1| protein binding protein, putative [Ricinus communis]
           gi|223543829|gb|EEF45357.1| protein binding protein,
           putative [Ricinus communis]
          Length = 414

 Score = 59.3 bits (142), Expect = 1e-06
 Identities = 38/117 (32%), Positives = 57/117 (48%), Gaps = 1/117 (0%)
 Frame = -1

Query: 481 NESVLELSKGAQREMITGIAGLSRMIERFNFTSEPTKHYVPLSSYTIGISNSPHVVESFE 302
           N SV ELS+G QREM  GIAG++RM ER + T + T    P+S    G S      +  +
Sbjct: 295 NNSVKELSRGVQREMSAGIAGVARMFERLDLTPKRTGASSPVSGCREGTSELSLKGKGMQ 354

Query: 301 DDTIVQSINQNTEETD-NYMKSTPSRTPINLQQHPTMHTSFSCTELKLIFLPRFHRH 134
           ++TI+Q++N+ +EE         P     N+Q    +H         +I +   H H
Sbjct: 355 ENTILQALNKKSEEVPCAASMDVPLHVSYNVQGRVEVHHEQVEKHKAIIAIVNIHWH 411


>ref|XP_002281045.1| PREDICTED: E3 ubiquitin-protein ligase RHF1A [Vitis vinifera]
           gi|297737001|emb|CBI26202.3| unnamed protein product
           [Vitis vinifera]
          Length = 391

 Score = 57.8 bits (138), Expect = 4e-06
 Identities = 38/96 (39%), Positives = 50/96 (52%)
 Frame = -1

Query: 505 FLSSLSHPNESVLELSKGAQREMITGIAGLSRMIERFNFTSEPTKHYVPLSSYTIGISNS 326
           F   L   N SV ELSKG QREM  GIA ++RMIER +   + T    P SS+T G SN 
Sbjct: 282 FKEKLLSRNNSVKELSKGVQREMSAGIASVTRMIERLDPILKRTGASNPDSSFTGGTSNV 341

Query: 325 PHVVESFEDDTIVQSINQNTEETDNYMKSTPSRTPI 218
            H  +  +++ I  S N      D    S+P  +P+
Sbjct: 342 SHKGKGVQENVITPSGNNGEISND----SSPDASPL 373


>ref|XP_006378404.1| hypothetical protein POPTR_0010s10240g [Populus trichocarpa]
           gi|550329497|gb|ERP56201.1| hypothetical protein
           POPTR_0010s10240g [Populus trichocarpa]
          Length = 405

 Score = 57.8 bits (138), Expect = 4e-06
 Identities = 33/76 (43%), Positives = 46/76 (60%)
 Frame = -1

Query: 481 NESVLELSKGAQREMITGIAGLSRMIERFNFTSEPTKHYVPLSSYTIGISNSPHVVESFE 302
           N SV ELSK  QREM  GIAG++RMIER + T++ T   +  S +T G SN     +  E
Sbjct: 302 NNSVKELSKEVQREMSAGIAGVARMIERLDLTTKRTGPSMSDSGFTGGTSNFSWKGKGVE 361

Query: 301 DDTIVQSINQNTEETD 254
            + I Q++ + +EE D
Sbjct: 362 QNIIAQALAKTSEEID 377


>ref|XP_002314719.2| zinc finger family protein [Populus trichocarpa]
           gi|550329496|gb|EEF00890.2| zinc finger family protein
           [Populus trichocarpa]
          Length = 418

 Score = 57.8 bits (138), Expect = 4e-06
 Identities = 33/76 (43%), Positives = 46/76 (60%)
 Frame = -1

Query: 481 NESVLELSKGAQREMITGIAGLSRMIERFNFTSEPTKHYVPLSSYTIGISNSPHVVESFE 302
           N SV ELSK  QREM  GIAG++RMIER + T++ T   +  S +T G SN     +  E
Sbjct: 302 NNSVKELSKEVQREMSAGIAGVARMIERLDLTTKRTGPSMSDSGFTGGTSNFSWKGKGVE 361

Query: 301 DDTIVQSINQNTEETD 254
            + I Q++ + +EE D
Sbjct: 362 QNIIAQALAKTSEEID 377


>ref|XP_004296921.1| PREDICTED: E3 ubiquitin-protein ligase RHF1A [Fragaria vesca subsp.
           vesca]
          Length = 381

 Score = 57.8 bits (138), Expect = 4e-06
 Identities = 33/84 (39%), Positives = 47/84 (55%)
 Frame = -1

Query: 481 NESVLELSKGAQREMITGIAGLSRMIERFNFTSEPTKHYVPLSSYTIGISNSPHVVESFE 302
           N SV ELSKG QREM  GIAG++RM ER + TS+      P+S  + G SN     ++  
Sbjct: 292 NNSVKELSKGVQREMTAGIAGVARMFERLDLTSKNPGSPTPVSDRSGGTSNFSAKGKAVL 351

Query: 301 DDTIVQSINQNTEETDNYMKSTPS 230
           ++ IVQ  N+++    +     PS
Sbjct: 352 ENVIVQCCNKSSGRISDETSEAPS 375


>ref|XP_011021589.1| PREDICTED: E3 ubiquitin-protein ligase RHF1A-like isoform X2
           [Populus euphratica]
          Length = 405

 Score = 57.4 bits (137), Expect = 6e-06
 Identities = 33/76 (43%), Positives = 45/76 (59%)
 Frame = -1

Query: 481 NESVLELSKGAQREMITGIAGLSRMIERFNFTSEPTKHYVPLSSYTIGISNSPHVVESFE 302
           N SV ELSK  QREM  GIAG++RMIER + T++ T   +  S +T G SN     +  E
Sbjct: 302 NNSVKELSKEVQREMSAGIAGVARMIERLDLTTKRTGPSMSDSGFTGGTSNFSWKGKGVE 361

Query: 301 DDTIVQSINQNTEETD 254
            + I Q++ +  EE D
Sbjct: 362 QNIIAQALAKTNEEID 377


>ref|XP_011021588.1| PREDICTED: E3 ubiquitin-protein ligase RHF1A-like isoform X1
           [Populus euphratica]
          Length = 410

 Score = 57.4 bits (137), Expect = 6e-06
 Identities = 33/76 (43%), Positives = 45/76 (59%)
 Frame = -1

Query: 481 NESVLELSKGAQREMITGIAGLSRMIERFNFTSEPTKHYVPLSSYTIGISNSPHVVESFE 302
           N SV ELSK  QREM  GIAG++RMIER + T++ T   +  S +T G SN     +  E
Sbjct: 302 NNSVKELSKEVQREMSAGIAGVARMIERLDLTTKRTGPSMSDSGFTGGTSNFSWKGKGVE 361

Query: 301 DDTIVQSINQNTEETD 254
            + I Q++ +  EE D
Sbjct: 362 QNIIAQALAKTNEEID 377


>ref|XP_009603257.1| PREDICTED: E3 ubiquitin-protein ligase RHF1A [Nicotiana
           tomentosiformis]
          Length = 365

 Score = 57.0 bits (136), Expect = 7e-06
 Identities = 32/61 (52%), Positives = 38/61 (62%)
 Frame = -1

Query: 505 FLSSLSHPNESVLELSKGAQREMITGIAGLSRMIERFNFTSEPTKHYVPLSSYTIGISNS 326
           F   L   N SV EL K  QREM  GIAG++RMIER + TS+ T    PLS+ T+G SN 
Sbjct: 254 FKEKLLSRNTSVKELGKEVQREMSAGIAGVTRMIERLDLTSKRTGASEPLSACTMGTSNF 313

Query: 325 P 323
           P
Sbjct: 314 P 314


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