BLASTX nr result

ID: Forsythia22_contig00035481 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Forsythia22_contig00035481
         (760 letters)

Database: ./nr 
           69,698,275 sequences; 24,982,196,650 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_007017129.1| Uncharacterized protein TCM_042328 [Theobrom...    55   5e-07
ref|XP_007022832.1| Uncharacterized protein TCM_026877 [Theobrom...    53   2e-06
ref|XP_007020288.1| Uncharacterized protein TCM_036737 [Theobrom...    53   3e-06
ref|XP_007010390.1| Retrotransposon, unclassified-like protein [...    52   9e-06

>ref|XP_007017129.1| Uncharacterized protein TCM_042328 [Theobroma cacao]
            gi|508787492|gb|EOY34748.1| Uncharacterized protein
            TCM_042328 [Theobroma cacao]
          Length = 910

 Score = 55.1 bits (131), Expect(2) = 5e-07
 Identities = 26/78 (33%), Positives = 44/78 (56%), Gaps = 1/78 (1%)
 Frame = -3

Query: 380  LKLCFQYGFLKVWAEADSLATIQLVKVT-TGP*CEQYTLAEIQQCQKQMDISYSHIWSEG 204
            L LC  Y   ++W E D+++ I+L++    GP   +Y +  ++Q        +SHI+ EG
Sbjct: 807  LILCRDYNIRRLWIEMDAISVIRLLQGNHRGPHAIRYLMVSLRQLLSHFSFRFSHIFREG 866

Query: 203  NSAADWLANMGYKENTFR 150
            N AAD+LAN G++    +
Sbjct: 867  NQAADFLANRGHEHQNLQ 884



 Score = 26.2 bits (56), Expect(2) = 5e-07
 Identities = 15/40 (37%), Positives = 21/40 (52%), Gaps = 5/40 (12%)
 Frame = -2

Query: 549 FYWRKLQSG-----YDGCLKRADNLAAGGGIINDKGNMLL 445
           F W K  +G      DG  K + N AAGGGI+ D   +++
Sbjct: 745 FSWHKPTTGEFKLNVDGSAKHSHN-AAGGGILRDHAGVMV 783


>ref|XP_007022832.1| Uncharacterized protein TCM_026877 [Theobroma cacao]
            gi|508778198|gb|EOY25454.1| Uncharacterized protein
            TCM_026877 [Theobroma cacao]
          Length = 2367

 Score = 53.1 bits (126), Expect(2) = 2e-06
 Identities = 27/78 (34%), Positives = 43/78 (55%), Gaps = 1/78 (1%)
 Frame = -3

Query: 380  LKLCFQYGFLKVWAEADSLATIQLVKVT-TGP*CEQYTLAEIQQCQKQMDISYSHIWSEG 204
            L LC  Y   ++W E D+ + I+L++    GP   +Y L  I+Q         +HI+ EG
Sbjct: 2264 LILCRDYNIRRLWIEMDATSVIRLLQGNHRGPHAIRYLLGSIRQLLSHFSFRLTHIFREG 2323

Query: 203  NSAADWLANMGYKENTFR 150
            N AAD+LAN G++  + +
Sbjct: 2324 NQAADFLANRGHEHQSLQ 2341



 Score = 26.2 bits (56), Expect(2) = 2e-06
 Identities = 14/40 (35%), Positives = 21/40 (52%), Gaps = 5/40 (12%)
 Frame = -2

Query: 549  FYWRKLQSG-----YDGCLKRADNLAAGGGIINDKGNMLL 445
            F W K  +G      DG  K + N AAGGG++ D   +++
Sbjct: 2202 FCWHKPSNGEFKLNVDGSAKLSQN-AAGGGVLRDHAGVMI 2240


>ref|XP_007020288.1| Uncharacterized protein TCM_036737 [Theobroma cacao]
            gi|508725616|gb|EOY17513.1| Uncharacterized protein
            TCM_036737 [Theobroma cacao]
          Length = 2215

 Score = 52.8 bits (125), Expect(2) = 3e-06
 Identities = 26/72 (36%), Positives = 40/72 (55%), Gaps = 1/72 (1%)
 Frame = -3

Query: 380  LKLCFQYGFLKVWAEADSLATIQLVKVT-TGP*CEQYTLAEIQQCQKQMDISYSHIWSEG 204
            L LC ++   ++W E D+   +Q++K    G    +Y LA I +C   +    SHI+ EG
Sbjct: 2112 LLLCIEHNISRLWIEMDAKVAVQMIKEGHQGSSRTRYLLASIHRCLSGISFRISHIFREG 2171

Query: 203  NSAADWLANMGY 168
            N AAD L+N G+
Sbjct: 2172 NQAADHLSNQGH 2183



 Score = 26.2 bits (56), Expect(2) = 3e-06
 Identities = 13/34 (38%), Positives = 19/34 (55%), Gaps = 1/34 (2%)
 Frame = -2

Query: 537  KLQSGYDGCLKRADNLAAGGGIIND-KGNMLLAF 439
            +L+   DG  K     AAGGG++ D  G+M+  F
Sbjct: 2058 ELKLNVDGSCKHNPQSAAGGGLLRDHTGSMIFGF 2091


>ref|XP_007010390.1| Retrotransposon, unclassified-like protein [Theobroma cacao]
            gi|508727303|gb|EOY19200.1| Retrotransposon,
            unclassified-like protein [Theobroma cacao]
          Length = 1368

 Score = 51.6 bits (122), Expect(2) = 9e-06
 Identities = 27/72 (37%), Positives = 41/72 (56%), Gaps = 1/72 (1%)
 Frame = -3

Query: 380  LKLCFQYGFLKVWAEADSLATIQLVKVT-TGP*CEQYTLAEIQQCQKQMDISYSHIWSEG 204
            L LC +Y   +VW E D+   IQ+++    G    QY L  I++C + + +  SHI  EG
Sbjct: 1233 LCLCMEYNVSRVWIEVDAQVVIQMIQNHHKGSYKIQYLLESIRKCLQVISVRISHIHREG 1292

Query: 203  NSAADWLANMGY 168
            N AAD+L+  G+
Sbjct: 1293 NQAADFLSKHGH 1304



 Score = 25.4 bits (54), Expect(2) = 9e-06
 Identities = 13/34 (38%), Positives = 19/34 (55%), Gaps = 1/34 (2%)
 Frame = -2

Query: 537  KLQSGYDGCLKRADNLAAGGGIIND-KGNMLLAF 439
            +L+   DG  K     AAGGG++ D  GN++  F
Sbjct: 1179 ELKLNVDGSSKDEFQNAAGGGVLRDHTGNLIFGF 1212


Top