BLASTX nr result
ID: Forsythia22_contig00035234
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Forsythia22_contig00035234
(844 letters)
Database: ./nr
69,698,275 sequences; 24,982,196,650 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
emb|CAN83392.1| hypothetical protein VITISV_041406 [Vitis vinifera] 186 9e-64
emb|CAN73924.1| hypothetical protein VITISV_041509 [Vitis vinifera] 187 3e-62
emb|CAN63683.1| hypothetical protein VITISV_030301 [Vitis vinifera] 187 1e-61
emb|CAN78451.1| hypothetical protein VITISV_005945 [Vitis vinifera] 185 1e-61
ref|XP_008356535.1| PREDICTED: uncharacterized protein LOC103420... 184 1e-61
emb|CAN67403.1| hypothetical protein VITISV_025614 [Vitis vinifera] 181 2e-61
emb|CAN61322.1| hypothetical protein VITISV_012106 [Vitis vinifera] 186 1e-60
ref|XP_008376990.1| PREDICTED: uncharacterized protein LOC103440... 177 1e-60
ref|NP_001175678.1| Os08g0544300 [Oryza sativa Japonica Group] g... 184 2e-60
emb|CAN69851.1| hypothetical protein VITISV_009554 [Vitis vinifera] 183 3e-60
emb|CAN67546.1| hypothetical protein VITISV_027734 [Vitis vinifera] 180 4e-60
gb|AAR88589.1| putative copia-like retrotransposon protein [Oryz... 182 7e-60
gb|EEC76475.1| hypothetical protein OsI_14210 [Oryza sativa Indi... 182 7e-60
emb|CAN59952.1| hypothetical protein VITISV_006720 [Vitis vinifera] 176 9e-60
emb|CAN81355.1| hypothetical protein VITISV_039158 [Vitis vinifera] 177 2e-59
emb|CAN61230.1| hypothetical protein VITISV_010115 [Vitis vinifera] 172 5e-59
emb|CAN59963.1| hypothetical protein VITISV_022756 [Vitis vinifera] 181 8e-59
gb|AAN06870.1| Putative gag-pol polyprotein [Oryza sativa Japoni... 170 1e-58
gb|AAT07563.1| putative polyprotein [Oryza sativa Japonica Group... 174 2e-58
gb|AAL66754.1|AF464738_5 putative copia-like retrotransposon Hop... 169 2e-58
>emb|CAN83392.1| hypothetical protein VITISV_041406 [Vitis vinifera]
Length = 1262
Score = 186 bits (471), Expect(3) = 9e-64
Identities = 91/178 (51%), Positives = 126/178 (70%), Gaps = 2/178 (1%)
Frame = +3
Query: 315 KQVLRYLKGT--VSSPFKPCSHKLLEGFADADRASNVDDRRSTSGYCIYLGWNLVQWSSK 488
K++LRYL GT + KP L GF DAD S+VDDRRSTSG+C++LG +LV WSSK
Sbjct: 1078 KRILRYLNGTTDLGIVLKPSETMNLVGFCDADWGSDVDDRRSTSGHCVFLGKSLVSWSSK 1137
Query: 489 *QNVVAQSPTESEYRSLAHVATEVLWLQSSITELGITLPQKPVLWCDNLGAKSLASNPIF 668
Q+ ++S TE+EYRSLA + +E+LWLQS ++EL + PV+WCDN+ SL++NP+
Sbjct: 1138 KQHTTSRSSTEAEYRSLASLTSEMLWLQSLLSELQTKMTMVPVIWCDNISTVSLSANPVL 1197
Query: 669 HARTKHIEIDVHFIREKVLNNELGVRYIPTDHQVADTLTKALNSTRFALHRSKLNVES 842
H+RTKH+E+D++F+REKV+ +L V ++PT+ QVAD TK L+ F R KL V S
Sbjct: 1198 HSRTKHMELDLYFVREKVMERKLVVNHVPTEDQVADVFTKPLSFRFFDKLREKLTVAS 1255
Score = 57.4 bits (137), Expect(3) = 9e-64
Identities = 28/61 (45%), Positives = 39/61 (63%)
Frame = +1
Query: 109 KLTWHMSSATPMTSGCKLALNDSEPFSKPSDYISTIGALQSLTMTRPDISFAVNKPSQFL 288
K+ S TPM SG KL+ +P +Y S +GALQ +T+TRP+I+F+VNK QF+
Sbjct: 1007 KMDGAKSLPTPMLSGLKLSAGMGDPIDNVFEYRSVVGALQYITITRPEIAFSVNKVCQFM 1066
Query: 289 Q 291
Q
Sbjct: 1067 Q 1067
Score = 50.1 bits (118), Expect(3) = 9e-64
Identities = 25/40 (62%), Positives = 32/40 (80%), Gaps = 1/40 (2%)
Frame = +3
Query: 3 LKELGPLNYFLGIEVFRDQEG-IHLTQSKYILDLLQKTNM 119
LK+LG L+YFLGIEV + +G +HL+Q KYI DLL+KT M
Sbjct: 969 LKDLGELSYFLGIEVKKTADGGLHLSQKKYIQDLLKKTKM 1008
>emb|CAN73924.1| hypothetical protein VITISV_041509 [Vitis vinifera]
Length = 1434
Score = 187 bits (475), Expect(3) = 3e-62
Identities = 93/176 (52%), Positives = 125/176 (71%), Gaps = 2/176 (1%)
Frame = +3
Query: 315 KQVLRYLKGTV--SSPFKPCSHKLLEGFADADRASNVDDRRSTSGYCIYLGWNLVQWSSK 488
K++LRYLKGT+ F+P + L+G++DAD AS DDRRSTSGYC++LG NL+ WSS
Sbjct: 1187 KRILRYLKGTIHLGLHFQPAASMELQGYSDADWASCPDDRRSTSGYCVFLGSNLISWSSS 1246
Query: 489 *QNVVAQSPTESEYRSLAHVATEVLWLQSSITELGITLPQKPVLWCDNLGAKSLASNPIF 668
Q +V++S ESEYR L + E++W+QS + EL + P+LWCDN A LA+NP+F
Sbjct: 1247 KQRLVSKSSAESEYRGLVSLTAELVWIQSLLQELCLPT-SPPILWCDNQSAAHLAANPVF 1305
Query: 669 HARTKHIEIDVHFIREKVLNNELGVRYIPTDHQVADTLTKALNSTRFALHRSKLNV 836
H+R+KHIE+D+HFIREKVL EL + Y+P+ Q+AD TK L T+F RSKL V
Sbjct: 1306 HSRSKHIELDLHFIREKVLRQELQICYVPSGDQLADIFTKHLPITQFCNLRSKLTV 1361
Score = 55.1 bits (131), Expect(3) = 3e-62
Identities = 27/51 (52%), Positives = 35/51 (68%)
Frame = +1
Query: 136 TPMTSGCKLALNDSEPFSKPSDYISTIGALQSLTMTRPDISFAVNKPSQFL 288
TP G L+ +D S PS+Y T+GALQ +T+TRPDI+FAVNK QF+
Sbjct: 1125 TPGRLGRTLSQSDGMSLSDPSEYRRTVGALQYVTLTRPDIAFAVNKACQFM 1175
Score = 45.8 bits (107), Expect(3) = 3e-62
Identities = 21/39 (53%), Positives = 28/39 (71%)
Frame = +3
Query: 3 LKELGPLNYFLGIEVFRDQEGIHLTQSKYILDLLQKTNM 119
L++LGPL+YFLGI+ + +HL Q KYI DLL +T M
Sbjct: 1079 LRDLGPLSYFLGIQAQQLGSVLHLNQHKYIADLLNRTQM 1117
>emb|CAN63683.1| hypothetical protein VITISV_030301 [Vitis vinifera]
Length = 1272
Score = 187 bits (475), Expect(3) = 1e-61
Identities = 93/176 (52%), Positives = 125/176 (71%), Gaps = 2/176 (1%)
Frame = +3
Query: 315 KQVLRYLKGTV--SSPFKPCSHKLLEGFADADRASNVDDRRSTSGYCIYLGWNLVQWSSK 488
K++LRYLKGT+ F+P + L+G++DAD AS DDRRSTSGYC++LG NL+ WSS
Sbjct: 1056 KRILRYLKGTIHLGLHFQPAASMELQGYSDADWASCPDDRRSTSGYCVFLGSNLISWSSS 1115
Query: 489 *QNVVAQSPTESEYRSLAHVATEVLWLQSSITELGITLPQKPVLWCDNLGAKSLASNPIF 668
Q +V++S ESEYR L + E++W+QS + EL + P+LWCDN A LA+NP+F
Sbjct: 1116 KQRLVSKSSAESEYRGLVSLTAELVWIQSLLQELCLPT-SPPILWCDNQSAXHLAANPVF 1174
Query: 669 HARTKHIEIDVHFIREKVLNNELGVRYIPTDHQVADTLTKALNSTRFALHRSKLNV 836
H+R+KHIE+D+HFIREKVL EL + Y+P+ Q+AD TK L T+F RSKL V
Sbjct: 1175 HSRSKHIELDLHFIREKVLRQELQICYVPSGDQLADIFTKHLPITQFCNLRSKLTV 1230
Score = 52.8 bits (125), Expect(3) = 1e-61
Identities = 26/51 (50%), Positives = 34/51 (66%)
Frame = +1
Query: 136 TPMTSGCKLALNDSEPFSKPSDYISTIGALQSLTMTRPDISFAVNKPSQFL 288
TP G L+ +D S P +Y T+GALQ +T+TRPDI+FAVNK QF+
Sbjct: 994 TPGRLGRTLSQSDGVSLSDPLEYRRTVGALQYVTLTRPDIAFAVNKACQFM 1044
Score = 46.2 bits (108), Expect(3) = 1e-61
Identities = 21/39 (53%), Positives = 29/39 (74%)
Frame = +3
Query: 3 LKELGPLNYFLGIEVFRDQEGIHLTQSKYILDLLQKTNM 119
L++LGPL+YFLGI+ + +HL Q KYI DLL++T M
Sbjct: 948 LRDLGPLSYFLGIQAQQLGSVLHLNQHKYIADLLKRTQM 986
>emb|CAN78451.1| hypothetical protein VITISV_005945 [Vitis vinifera]
Length = 773
Score = 185 bits (470), Expect(3) = 1e-61
Identities = 92/176 (52%), Positives = 124/176 (70%), Gaps = 2/176 (1%)
Frame = +3
Query: 315 KQVLRYLKGTV--SSPFKPCSHKLLEGFADADRASNVDDRRSTSGYCIYLGWNLVQWSSK 488
K++LRYLKGT+ F+P + +G++DAD AS DDRRSTSGYC++LG NL+ WSS
Sbjct: 534 KRILRYLKGTIHLGLHFQPAASMEXQGYSDADWASCPDDRRSTSGYCVFLGSNLISWSSS 593
Query: 489 *QNVVAQSPTESEYRSLAHVATEVLWLQSSITELGITLPQKPVLWCDNLGAKSLASNPIF 668
Q +V++S ESEYR L + E++W+QS + EL + P+LWCDN A LA+NP+F
Sbjct: 594 KQRLVSKSSAESEYRGLVSLTAELVWIQSLLQELCLPT-SPPILWCDNQSAAHLAANPVF 652
Query: 669 HARTKHIEIDVHFIREKVLNNELGVRYIPTDHQVADTLTKALNSTRFALHRSKLNV 836
H+R+KHIE+D+HFIREKVL EL + Y+P+ Q+AD TK L T+F RSKL V
Sbjct: 653 HSRSKHIELDLHFIREKVLRQELQICYVPSGDQLADIFTKHLPITQFCNLRSKLTV 708
Score = 55.1 bits (131), Expect(3) = 1e-61
Identities = 27/51 (52%), Positives = 35/51 (68%)
Frame = +1
Query: 136 TPMTSGCKLALNDSEPFSKPSDYISTIGALQSLTMTRPDISFAVNKPSQFL 288
TP G L+ +D S PS+Y T+GALQ +T+TRPDI+FAVNK QF+
Sbjct: 472 TPGRLGRTLSQSDGVSLSDPSEYRRTVGALQYVTLTRPDIAFAVNKACQFM 522
Score = 45.8 bits (107), Expect(3) = 1e-61
Identities = 21/39 (53%), Positives = 28/39 (71%)
Frame = +3
Query: 3 LKELGPLNYFLGIEVFRDQEGIHLTQSKYILDLLQKTNM 119
L++LGPL+YFLGI+ + +HL Q KYI DLL +T M
Sbjct: 426 LRDLGPLSYFLGIQAQQLGSVLHLNQHKYIADLLNRTQM 464
>ref|XP_008356535.1| PREDICTED: uncharacterized protein LOC103420252 [Malus domestica]
Length = 1312
Score = 184 bits (466), Expect(3) = 1e-61
Identities = 98/175 (56%), Positives = 123/175 (70%), Gaps = 3/175 (1%)
Frame = +3
Query: 315 KQVLRYLKGTVSSPF---KPCSHKLLEGFADADRASNVDDRRSTSGYCIYLGWNLVQWSS 485
K++LR+LK TVS K H L ++DAD A DRRSTSGYCI+LG NL+ WS+
Sbjct: 1118 KRILRFLKATVSHGLWFKKGTVH--LTAYSDADWAGCPFDRRSTSGYCIFLGSNLISWSA 1175
Query: 486 K*QNVVAQSPTESEYRSLAHVATEVLWLQSSITELGITLPQKPVLWCDNLGAKSLASNPI 665
K Q VA+S TE+EYRSLAH A E+ W+ +LG+ LPQ P LWCDNL A SLASNP+
Sbjct: 1176 KKQPTVARSSTEAEYRSLAHTAAEITWICKVFKDLGLHLPQVPSLWCDNLSAISLASNPV 1235
Query: 666 FHARTKHIEIDVHFIREKVLNNELGVRYIPTDHQVADTLTKALNSTRFALHRSKL 830
FHARTKHIE+D H+IRE VL N L V+Y+ + Q+AD TK+L+ +RF +SKL
Sbjct: 1236 FHARTKHIELDYHYIRELVLANLLKVQYVCSHVQLADIHTKSLSKSRFLYLQSKL 1290
Score = 55.5 bits (132), Expect(3) = 1e-61
Identities = 26/40 (65%), Positives = 32/40 (80%)
Frame = +3
Query: 3 LKELGPLNYFLGIEVFRDQEGIHLTQSKYILDLLQKTNMA 122
+K+LGPL+YFLG+EV R +G+ L QSKYI DLL KT MA
Sbjct: 1012 VKDLGPLHYFLGLEVQRSADGLFLHQSKYISDLLHKTRMA 1051
Score = 46.6 bits (109), Expect(3) = 1e-61
Identities = 21/34 (61%), Positives = 27/34 (79%)
Frame = +1
Query: 193 PSDYISTIGALQSLTMTRPDISFAVNKPSQFLQA 294
P++Y S +GALQ LT TRPD+SFAVN+ QF+ A
Sbjct: 1075 PTEYRSIVGALQYLTWTRPDLSFAVNQVCQFMHA 1108
>emb|CAN67403.1| hypothetical protein VITISV_025614 [Vitis vinifera]
Length = 1271
Score = 181 bits (458), Expect(3) = 2e-61
Identities = 91/176 (51%), Positives = 125/176 (71%), Gaps = 2/176 (1%)
Frame = +3
Query: 315 KQVLRYLKGTVSSPFKPCSHKLLE--GFADADRASNVDDRRSTSGYCIYLGWNLVQWSSK 488
K++LRYLKGT+S + L+ G+ DAD AS DDRRST GY I+LG NLV WSS
Sbjct: 1040 KRILRYLKGTLSYGIQMQQSTSLDIHGYTDADWASCPDDRRSTGGYGIFLGPNLVSWSSN 1099
Query: 489 *QNVVAQSPTESEYRSLAHVATEVLWLQSSITELGITLPQKPVLWCDNLGAKSLASNPIF 668
Q VV++S ESEYR+LA +E++W+Q + EL ++ P+LWCDN A LA+NP+F
Sbjct: 1100 KQKVVSRSSAESEYRALASATSEMIWIQYVLQELCLSSSSPPLLWCDNKSAAHLAANPVF 1159
Query: 669 HARTKHIEIDVHFIREKVLNNELGVRYIPTDHQVADTLTKALNSTRFALHRSKLNV 836
HARTKHIE+D+HFIR+ VL +L ++Y+P+ QVAD TK ++S++F R+KL+V
Sbjct: 1160 HARTKHIEMDLHFIRDHVLRKQLVIQYLPSAEQVADIFTKHISSSQFLSFRTKLSV 1215
Score = 59.3 bits (142), Expect(3) = 2e-61
Identities = 31/53 (58%), Positives = 37/53 (69%)
Frame = +1
Query: 130 SATPMTSGCKLALNDSEPFSKPSDYISTIGALQSLTMTRPDISFAVNKPSQFL 288
+ TP G L+ D EPFS + Y ST+GALQ LT+TRPDISFAVNK QF+
Sbjct: 976 ATTPGLLGQTLSHLDGEPFSDATLYRSTVGALQYLTLTRPDISFAVNKACQFM 1028
Score = 45.4 bits (106), Expect(3) = 2e-61
Identities = 22/39 (56%), Positives = 27/39 (69%)
Frame = +3
Query: 3 LKELGPLNYFLGIEVFRDQEGIHLTQSKYILDLLQKTNM 119
L++LG +NYFLGIEV R HL+Q KY DLL +T M
Sbjct: 932 LRDLGYVNYFLGIEVVRSGTMFHLSQHKYTQDLLSRTAM 970
>emb|CAN61322.1| hypothetical protein VITISV_012106 [Vitis vinifera]
Length = 1432
Score = 186 bits (472), Expect(3) = 1e-60
Identities = 87/174 (50%), Positives = 125/174 (71%), Gaps = 2/174 (1%)
Frame = +3
Query: 315 KQVLRYLKGTVSSP--FKPCSHKLLEGFADADRASNVDDRRSTSGYCIYLGWNLVQWSSK 488
K++LRYL+GT+ F P S+ +EGF DAD +++DDRRS+SGY +YLG NLV WSS
Sbjct: 1216 KRILRYLRGTMQDGLLFSPSSNLTIEGFTDADWGAHLDDRRSSSGYLVYLGGNLVSWSST 1275
Query: 489 *QNVVAQSPTESEYRSLAHVATEVLWLQSSITELGITLPQKPVLWCDNLGAKSLASNPIF 668
Q VV++S ESEYR L E++W+Q+ + EL + +P P+LW DN+ A +A NP+F
Sbjct: 1276 KQKVVSRSSAESEYRGLVFATAEIVWMQALLQELCVPIPAIPLLWYDNISAYHMAKNPVF 1335
Query: 669 HARTKHIEIDVHFIREKVLNNELGVRYIPTDHQVADTLTKALNSTRFALHRSKL 830
HARTKHIEID+HFIR++V+ ++ ++++PT+ Q D LTK L S+RF +S+L
Sbjct: 1336 HARTKHIEIDLHFIRDQVMRGKIQLQFVPTEEQPVDLLTKHLTSSRFLSLKSQL 1389
Score = 53.9 bits (128), Expect(3) = 1e-60
Identities = 26/52 (50%), Positives = 35/52 (67%)
Frame = +1
Query: 136 TPMTSGCKLALNDSEPFSKPSDYISTIGALQSLTMTRPDISFAVNKPSQFLQ 291
TP G L+ D +P + + Y S +GALQ +T+TRPDI+FAVNK QF+Q
Sbjct: 1154 TPGAVGKNLSKFDGDPMTDVTHYRSVVGALQYVTLTRPDIAFAVNKACQFMQ 1205
Score = 42.4 bits (98), Expect(3) = 1e-60
Identities = 19/39 (48%), Positives = 30/39 (76%)
Frame = +3
Query: 3 LKELGPLNYFLGIEVFRDQEGIHLTQSKYILDLLQKTNM 119
L++LG L++FLGIEV ++ + L+Q+KYI DLL +T +
Sbjct: 1108 LRDLGQLSFFLGIEVSYNEGSMTLSQTKYISDLLHRTEL 1146
>ref|XP_008376990.1| PREDICTED: uncharacterized protein LOC103440084 [Malus domestica]
Length = 1106
Score = 177 bits (449), Expect(3) = 1e-60
Identities = 95/177 (53%), Positives = 121/177 (68%), Gaps = 3/177 (1%)
Frame = +3
Query: 315 KQVLRYLKGTVSSPF---KPCSHKLLEGFADADRASNVDDRRSTSGYCIYLGWNLVQWSS 485
K++LR+LK VS K H L ++DAD A DRRSTSGYCI+LG NL+ WS+
Sbjct: 912 KRILRFLKAXVSHGLWFKKGDIH--LTAYSDADWAGCPFDRRSTSGYCIFLGSNLISWSA 969
Query: 486 K*QNVVAQSPTESEYRSLAHVATEVLWLQSSITELGITLPQKPVLWCDNLGAKSLASNPI 665
K Q VA+S TE+EYRSLAH A E+ W+ +LG LP P LWCDNL A SLASNP+
Sbjct: 970 KKQPTVARSSTEAEYRSLAHTAAEITWICKVFKDLGXHLPHVPSLWCDNLSAISLASNPV 1029
Query: 666 FHARTKHIEIDVHFIREKVLNNELGVRYIPTDHQVADTLTKALNSTRFALHRSKLNV 836
FHARTKHIE+D H+I E VL N L V+Y+ + Q+AD TK+L+ +RF +SKL++
Sbjct: 1030 FHARTKHIELDYHYIXELVLANLLKVQYVCSQDQLADIHTKSLSKSRFLYLQSKLSL 1086
Score = 59.3 bits (142), Expect(3) = 1e-60
Identities = 28/40 (70%), Positives = 33/40 (82%)
Frame = +3
Query: 3 LKELGPLNYFLGIEVFRDQEGIHLTQSKYILDLLQKTNMA 122
+K+LGPL+YFLG+EV R G+ L QSKYILDLL KTNMA
Sbjct: 806 VKDLGPLHYFLGLEVQRSSAGLFLHQSKYILDLLHKTNMA 845
Score = 45.8 bits (107), Expect(3) = 1e-60
Identities = 21/34 (61%), Positives = 26/34 (76%)
Frame = +1
Query: 193 PSDYISTIGALQSLTMTRPDISFAVNKPSQFLQA 294
P +Y S +GALQ LT TRPD+SFAVN+ QF+ A
Sbjct: 869 PHEYRSIVGALQYLTWTRPDLSFAVNQVCQFMHA 902
>ref|NP_001175678.1| Os08g0544300 [Oryza sativa Japonica Group]
gi|255678617|dbj|BAH94406.1| Os08g0544300 [Oryza sativa
Japonica Group]
Length = 821
Score = 184 bits (467), Expect(3) = 2e-60
Identities = 88/177 (49%), Positives = 126/177 (71%), Gaps = 2/177 (1%)
Frame = +3
Query: 315 KQVLRYLKGTVSSPFKPCSHK--LLEGFADADRASNVDDRRSTSGYCIYLGWNLVQWSSK 488
K++LRY+K TV + K C + L+ GF+DAD A + DDRRST G+ ++LG NLV WS++
Sbjct: 637 KRILRYVKYTVDTGLKFCRNPSLLVSGFSDADWAGSPDDRRSTGGFAVFLGPNLVSWSAR 696
Query: 489 *QNVVAQSPTESEYRSLAHVATEVLWLQSSITELGITLPQKPVLWCDNLGAKSLASNPIF 668
Q V++S TE+EY++LA+ E++W+Q+ + ELG+ P+ LWCDNLGAK L++NPIF
Sbjct: 697 KQATVSRSSTEAEYKALANATAEIMWVQTLLQELGVESPRAAKLWCDNLGAKYLSANPIF 756
Query: 669 HARTKHIEIDVHFIREKVLNNELGVRYIPTDHQVADTLTKALNSTRFALHRSKLNVE 839
HARTKHIE+D HF+RE+V L + YI T QVAD TKA+ + + ++ LN+E
Sbjct: 757 HARTKHIEVDFHFVRERVARKLLEIAYISTKDQVADGFTKAIPVRQMEMFKNNLNLE 813
Score = 51.6 bits (122), Expect(3) = 2e-60
Identities = 28/57 (49%), Positives = 39/57 (68%), Gaps = 3/57 (5%)
Frame = +1
Query: 133 ATPMTSGCKLALNDSEPFSKPSD---YISTIGALQSLTMTRPDISFAVNKPSQFLQA 294
+TP+++ KL++N+ P D Y S +GALQ LT+TRPDISF++NK QFL A
Sbjct: 572 STPLSTSEKLSVNEGTLLG-PQDSTQYRSVVGALQYLTLTRPDISFSINKVCQFLHA 627
Score = 46.6 bits (109), Expect(3) = 2e-60
Identities = 21/39 (53%), Positives = 30/39 (76%)
Frame = +3
Query: 3 LKELGPLNYFLGIEVFRDQEGIHLTQSKYILDLLQKTNM 119
LK+LG L+YFLGIEV + ++G+ L+Q KY DLL++ M
Sbjct: 527 LKDLGDLHYFLGIEVHKVKDGLMLSQEKYASDLLRRVGM 565
>emb|CAN69851.1| hypothetical protein VITISV_009554 [Vitis vinifera]
Length = 1282
Score = 183 bits (465), Expect(3) = 3e-60
Identities = 87/174 (50%), Positives = 125/174 (71%), Gaps = 2/174 (1%)
Frame = +3
Query: 315 KQVLRYLKGTVSSPF--KPCSHKLLEGFADADRASNVDDRRSTSGYCIYLGWNLVQWSSK 488
K++LRYLKGT+ P ++ +EGF+DAD + DDRRS+SGY +YLG NLV WSS
Sbjct: 1084 KRILRYLKGTMQDGLLLSPSTNLTIEGFSDADWGAQPDDRRSSSGYLVYLGGNLVSWSST 1143
Query: 489 *QNVVAQSPTESEYRSLAHVATEVLWLQSSITELGITLPQKPVLWCDNLGAKSLASNPIF 668
Q VV++S +SEYR+LA E++W+Q+ + EL + +P P+LW DN+ A +A NP+F
Sbjct: 1144 KQKVVSRSSAKSEYRALALATAEIIWMQALLQELCVPIPAIPLLWYDNISAYHMAKNPVF 1203
Query: 669 HARTKHIEIDVHFIREKVLNNELGVRYIPTDHQVADTLTKALNSTRFALHRSKL 830
HARTKHIEID+HFIR++V+ ++ + ++PT+ Q AD LTK L S+RF +S+L
Sbjct: 1204 HARTKHIEIDLHFIRDQVIRGKIQLHFVPTEDQPADLLTKHLTSSRFLSLKSQL 1257
Score = 55.5 bits (132), Expect(3) = 3e-60
Identities = 27/52 (51%), Positives = 35/52 (67%)
Frame = +1
Query: 136 TPMTSGCKLALNDSEPFSKPSDYISTIGALQSLTMTRPDISFAVNKPSQFLQ 291
TP G L+ D +P + + Y S +GALQ LT+TRPDI+FAVNK QF+Q
Sbjct: 1022 TPGAVGKNLSKFDGDPMDEVTQYRSVVGALQYLTITRPDIAFAVNKTCQFMQ 1073
Score = 42.4 bits (98), Expect(3) = 3e-60
Identities = 19/39 (48%), Positives = 29/39 (74%)
Frame = +3
Query: 3 LKELGPLNYFLGIEVFRDQEGIHLTQSKYILDLLQKTNM 119
L++L L+YFLGIEV + ++L+Q+KY+ DLL +T M
Sbjct: 976 LRDLXQLSYFLGIEVSYHEGSMNLSQTKYVSDLLHRTEM 1014
>emb|CAN67546.1| hypothetical protein VITISV_027734 [Vitis vinifera]
Length = 1635
Score = 180 bits (457), Expect(3) = 4e-60
Identities = 87/178 (48%), Positives = 124/178 (69%), Gaps = 2/178 (1%)
Frame = +3
Query: 315 KQVLRYLKGTVSSPF--KPCSHKLLEGFADADRASNVDDRRSTSGYCIYLGWNLVQWSSK 488
K++LRYLKGT+ P ++ +E F+DA+ + DDRRS+SGY +YLG NLV WSS
Sbjct: 1010 KRILRYLKGTMQDGLLLSPSTNLTIEXFSDANWGAQPDDRRSSSGYLVYLGGNLVSWSST 1069
Query: 489 *QNVVAQSPTESEYRSLAHVATEVLWLQSSITELGITLPQKPVLWCDNLGAKSLASNPIF 668
Q VV++S ESEYR LA E++W+Q+ + EL + +P P+LW DN+ A +A NP+F
Sbjct: 1070 KQKVVSRSSAESEYRGLALATAEIIWMQALLQELCVPIPAIPLLWYDNISAYHMAKNPVF 1129
Query: 669 HARTKHIEIDVHFIREKVLNNELGVRYIPTDHQVADTLTKALNSTRFALHRSKLNVES 842
HARTKHIEID+HFIR++V+ ++ + ++PT+ Q AD LTK L S+RF +S L + S
Sbjct: 1130 HARTKHIEIDLHFIRDQVIRGKIQLHFVPTEDQPADLLTKHLTSSRFLSLKSHLCIAS 1187
Score = 55.5 bits (132), Expect(3) = 4e-60
Identities = 27/52 (51%), Positives = 35/52 (67%)
Frame = +1
Query: 136 TPMTSGCKLALNDSEPFSKPSDYISTIGALQSLTMTRPDISFAVNKPSQFLQ 291
TP G L+ D +P + + Y S +GALQ LT+TRPDI+FAVNK QF+Q
Sbjct: 948 TPGVVGKNLSKFDGDPMDEVTQYRSVVGALQYLTITRPDIAFAVNKACQFMQ 999
Score = 45.1 bits (105), Expect(3) = 4e-60
Identities = 20/39 (51%), Positives = 30/39 (76%)
Frame = +3
Query: 3 LKELGPLNYFLGIEVFRDQEGIHLTQSKYILDLLQKTNM 119
L++LG L+YFLGIEV + ++L+Q+KY+ DLL +T M
Sbjct: 902 LRDLGQLSYFLGIEVSYHEGSMNLSQTKYVSDLLHRTEM 940
>gb|AAR88589.1| putative copia-like retrotransposon protein [Oryza sativa Japonica
Group]
Length = 1399
Score = 182 bits (461), Expect(3) = 7e-60
Identities = 87/177 (49%), Positives = 125/177 (70%), Gaps = 2/177 (1%)
Frame = +3
Query: 315 KQVLRYLKGTVSSPFKPCSHK--LLEGFADADRASNVDDRRSTSGYCIYLGWNLVQWSSK 488
K++LRY+K TV + K C + L+ GF+DAD A + DDRRST G+ ++LG NLV WS++
Sbjct: 1215 KRILRYVKYTVDTGLKFCRNPSLLVSGFSDADWAGSPDDRRSTGGFAVFLGPNLVSWSAR 1274
Query: 489 *QNVVAQSPTESEYRSLAHVATEVLWLQSSITELGITLPQKPVLWCDNLGAKSLASNPIF 668
Q V++S E+EY++LA+ E++W+Q+ + ELG+ P+ LWCDNLGAK L++NPIF
Sbjct: 1275 KQATVSRSSIEAEYKALANATAEIMWVQTLLQELGVESPRAAKLWCDNLGAKYLSANPIF 1334
Query: 669 HARTKHIEIDVHFIREKVLNNELGVRYIPTDHQVADTLTKALNSTRFALHRSKLNVE 839
HARTKHIE+D HF+RE+V L + YI T QVAD TKA+ + + ++ LN+E
Sbjct: 1335 HARTKHIEVDFHFVRERVARKLLEIAYISTKDQVADGFTKAIPVRQMEMFKNNLNLE 1391
Score = 51.6 bits (122), Expect(3) = 7e-60
Identities = 28/57 (49%), Positives = 39/57 (68%), Gaps = 3/57 (5%)
Frame = +1
Query: 133 ATPMTSGCKLALNDSEPFSKPSD---YISTIGALQSLTMTRPDISFAVNKPSQFLQA 294
+TP+++ KL++N+ P D Y S +GALQ LT+TRPDISF++NK QFL A
Sbjct: 1150 STPLSTSEKLSVNEGTLLG-PQDSTQYRSVVGALQYLTLTRPDISFSINKVCQFLHA 1205
Score = 46.6 bits (109), Expect(3) = 7e-60
Identities = 21/39 (53%), Positives = 30/39 (76%)
Frame = +3
Query: 3 LKELGPLNYFLGIEVFRDQEGIHLTQSKYILDLLQKTNM 119
LK+LG L+YFLGIEV + ++G+ L+Q KY DLL++ M
Sbjct: 1105 LKDLGDLHYFLGIEVHKVKDGLMLSQEKYASDLLRRVGM 1143
>gb|EEC76475.1| hypothetical protein OsI_14210 [Oryza sativa Indica Group]
Length = 391
Score = 182 bits (461), Expect(3) = 7e-60
Identities = 87/177 (49%), Positives = 125/177 (70%), Gaps = 2/177 (1%)
Frame = +3
Query: 315 KQVLRYLKGTVSSPFKPCSHK--LLEGFADADRASNVDDRRSTSGYCIYLGWNLVQWSSK 488
K++LRY+K TV + K C + L+ GF+DAD A + DDRRST G+ ++LG NLV WS++
Sbjct: 207 KRILRYVKYTVDTGLKFCRNPSLLVSGFSDADWAGSPDDRRSTGGFAVFLGPNLVSWSAR 266
Query: 489 *QNVVAQSPTESEYRSLAHVATEVLWLQSSITELGITLPQKPVLWCDNLGAKSLASNPIF 668
Q V++S E+EY++LA+ E++W+Q+ + ELG+ P+ LWCDNLGAK L++NPIF
Sbjct: 267 KQATVSRSSIEAEYKALANATAEIMWVQTLLQELGVESPRAAKLWCDNLGAKYLSANPIF 326
Query: 669 HARTKHIEIDVHFIREKVLNNELGVRYIPTDHQVADTLTKALNSTRFALHRSKLNVE 839
HARTKHIE+D HF+RE+V L + YI T QVAD TKA+ + + ++ LN+E
Sbjct: 327 HARTKHIEVDFHFVRERVARKLLEIAYISTKDQVADGFTKAIPVRQMEMFKNNLNLE 383
Score = 51.6 bits (122), Expect(3) = 7e-60
Identities = 28/57 (49%), Positives = 39/57 (68%), Gaps = 3/57 (5%)
Frame = +1
Query: 133 ATPMTSGCKLALNDSEPFSKPSD---YISTIGALQSLTMTRPDISFAVNKPSQFLQA 294
+TP+++ KL++N+ P D Y S +GALQ LT+TRPDISF++NK QFL A
Sbjct: 142 STPLSTSEKLSVNEGTLLG-PQDSTQYRSVVGALQYLTLTRPDISFSINKVCQFLHA 197
Score = 46.6 bits (109), Expect(3) = 7e-60
Identities = 21/39 (53%), Positives = 30/39 (76%)
Frame = +3
Query: 3 LKELGPLNYFLGIEVFRDQEGIHLTQSKYILDLLQKTNM 119
LK+LG L+YFLGIEV + ++G+ L+Q KY DLL++ M
Sbjct: 97 LKDLGDLHYFLGIEVHKVKDGLMLSQEKYASDLLRRVGM 135
>emb|CAN59952.1| hypothetical protein VITISV_006720 [Vitis vinifera]
Length = 1365
Score = 176 bits (447), Expect(3) = 9e-60
Identities = 88/174 (50%), Positives = 122/174 (70%), Gaps = 2/174 (1%)
Frame = +3
Query: 315 KQVLRYLKGTVSS--PFKPCSHKLLEGFADADRASNVDDRRSTSGYCIYLGWNLVQWSSK 488
K++LRYLKGT + +P +H ++ + DAD + DDRRS+SGY +YLG NLV W++
Sbjct: 1159 KRILRYLKGTTTHGLXLQPSAHFTVQAYTDADWGAQPDDRRSSSGYLVYLGNNLVSWTAS 1218
Query: 489 *QNVVAQSPTESEYRSLAHVATEVLWLQSSITELGITLPQKPVLWCDNLGAKSLASNPIF 668
Q VV+ S ESEYR LA E++W Q+ ++EL I++ P L+ DN+ A +A NP+F
Sbjct: 1219 KQKVVSXSSAESEYRGLAIATXEIIWTQALLSELCISJTSIPTLYYDNISAYYMAKNPVF 1278
Query: 669 HARTKHIEIDVHFIREKVLNNELGVRYIPTDHQVADTLTKALNSTRFALHRSKL 830
HARTKHIEID+HFIR++VL+N+L ++YIP+ Q AD LTK L S+RF RS L
Sbjct: 1279 HARTKHIEIDLHFIRDQVLHNKLQLQYIPSTDQPADILTKHLTSSRFLSLRSHL 1332
Score = 53.1 bits (126), Expect(3) = 9e-60
Identities = 25/39 (64%), Positives = 32/39 (82%)
Frame = +3
Query: 3 LKELGPLNYFLGIEVFRDQEGIHLTQSKYILDLLQKTNM 119
L++LG L+YFLGIEV D +HL+QSKYI DLLQ+T+M
Sbjct: 1051 LRDLGQLSYFLGIEVTYDGGSMHLSQSKYITDLLQRTSM 1089
Score = 50.1 bits (118), Expect(3) = 9e-60
Identities = 25/54 (46%), Positives = 35/54 (64%)
Frame = +1
Query: 127 SSATPMTSGCKLALNDSEPFSKPSDYISTIGALQSLTMTRPDISFAVNKPSQFL 288
++ATP T G L+ D + + Y S +GALQ T+TRPDI+F+VNK QF+
Sbjct: 1094 AAATPGTVGLSLSQFDGDLMDDVTMYRSVVGALQYATLTRPDIAFSVNKACQFM 1147
>emb|CAN81355.1| hypothetical protein VITISV_039158 [Vitis vinifera]
Length = 1402
Score = 177 bits (450), Expect(3) = 2e-59
Identities = 88/174 (50%), Positives = 123/174 (70%), Gaps = 2/174 (1%)
Frame = +3
Query: 315 KQVLRYLKGTVSSPF--KPCSHKLLEGFADADRASNVDDRRSTSGYCIYLGWNLVQWSSK 488
K++LRYLKGT++ +P +H ++ + DAD + DDRRS+SGY +YLG NLV W++
Sbjct: 1196 KRILRYLKGTITHGLLLQPSAHFTIQAYTDADWGAQPDDRRSSSGYLVYLGNNLVSWTAS 1255
Query: 489 *QNVVAQSPTESEYRSLAHVATEVLWLQSSITELGITLPQKPVLWCDNLGAKSLASNPIF 668
Q VV++S ESEYR LA E++W Q+ + EL I++ P L+ DN+ A +A NP+F
Sbjct: 1256 KQKVVSRSSAESEYRGLAIATAEIIWTQALLRELCISITSIPTLYYDNISAYYMAKNPVF 1315
Query: 669 HARTKHIEIDVHFIREKVLNNELGVRYIPTDHQVADTLTKALNSTRFALHRSKL 830
HARTKHIEID+HFIR++VL+N+L ++YIP+ Q AD LTK L S+RF RS L
Sbjct: 1316 HARTKHIEIDLHFIRDQVLHNKLQLQYIPSTDQPADILTKHLTSSRFLSLRSHL 1369
Score = 51.6 bits (122), Expect(3) = 2e-59
Identities = 24/39 (61%), Positives = 31/39 (79%)
Frame = +3
Query: 3 LKELGPLNYFLGIEVFRDQEGIHLTQSKYILDLLQKTNM 119
L++LG L+YFLGIEV D +HL+Q KYI DLLQ+T+M
Sbjct: 1088 LRDLGQLSYFLGIEVTYDGGSLHLSQRKYITDLLQRTSM 1126
Score = 49.7 bits (117), Expect(3) = 2e-59
Identities = 24/54 (44%), Positives = 35/54 (64%)
Frame = +1
Query: 127 SSATPMTSGCKLALNDSEPFSKPSDYISTIGALQSLTMTRPDISFAVNKPSQFL 288
++ATP T G L+ D + + Y S +GALQ T+TRPDI+F++NK QF+
Sbjct: 1131 AAATPGTVGLSLSQFDGDLMDDVTMYRSVVGALQYATLTRPDIAFSINKACQFM 1184
>emb|CAN61230.1| hypothetical protein VITISV_010115 [Vitis vinifera]
Length = 478
Score = 172 bits (437), Expect(3) = 5e-59
Identities = 88/176 (50%), Positives = 119/176 (67%), Gaps = 2/176 (1%)
Frame = +3
Query: 315 KQVLRYLKGTVSSPF--KPCSHKLLEGFADADRASNVDDRRSTSGYCIYLGWNLVQWSSK 488
K++LRYL GT+ + S L F+D+D A N DD STS Y IYLG N + WSSK
Sbjct: 286 KRLLRYLCGTLDHDITLRRTSPLALHAFSDSDWAGNKDDFTSTSAYIIYLGHNPISWSSK 345
Query: 489 *QNVVAQSPTESEYRSLAHVATEVLWLQSSITELGITLPQKPVLWCDNLGAKSLASNPIF 668
Q VA+S TE+EYRS+A A E+ W+ S +TELG+TLPQ+PV++CDN+GA +L SNP+F
Sbjct: 346 KQRTVARSSTEAEYRSVASTAAEIRWICSLLTELGVTLPQQPVIYCDNVGATNLCSNPVF 405
Query: 669 HARTKHIEIDVHFIREKVLNNELGVRYIPTDHQVADTLTKALNSTRFALHRSKLNV 836
H+R KH+ +D HFIRE+V N L V +I Q+AD LTK L +F ++K+ +
Sbjct: 406 HSRMKHVALDYHFIREQVQNGLLRVSHISASDQLADALTKPLARPQFDSLKAKIGL 461
Score = 53.9 bits (128), Expect(3) = 5e-59
Identities = 26/60 (43%), Positives = 39/60 (65%), Gaps = 4/60 (6%)
Frame = +1
Query: 121 HMSSA----TPMTSGCKLALNDSEPFSKPSDYISTIGALQSLTMTRPDISFAVNKPSQFL 288
HM+ A TP+ + L L P S P++Y + +G+LQ L++TRPDI++ VNK SQF+
Sbjct: 215 HMTEAKPAPTPLATSPILTLQSGTPLSDPTEYRTVVGSLQYLSLTRPDIAYTVNKLSQFM 274
Score = 50.8 bits (120), Expect(3) = 5e-59
Identities = 23/39 (58%), Positives = 29/39 (74%)
Frame = +3
Query: 3 LKELGPLNYFLGIEVFRDQEGIHLTQSKYILDLLQKTNM 119
LK+LGPL YFLG+EV G+ L+Q KYI DLL +T+M
Sbjct: 178 LKDLGPLTYFLGVEVTSHTNGLFLSQRKYIADLLNRTHM 216
>emb|CAN59963.1| hypothetical protein VITISV_022756 [Vitis vinifera]
Length = 530
Score = 181 bits (460), Expect(3) = 8e-59
Identities = 91/176 (51%), Positives = 123/176 (69%), Gaps = 2/176 (1%)
Frame = +3
Query: 315 KQVLRYLKGTV--SSPFKPCSHKLLEGFADADRASNVDDRRSTSGYCIYLGWNLVQWSSK 488
K++LRYLKGT+ F+P + L+G++DAD AS DDRRSTSGYC++LG NL+ WSS
Sbjct: 314 KRILRYLKGTIHLGLHFQPAASMELQGYSDADWASCPDDRRSTSGYCVFLGSNLIFWSSS 373
Query: 489 *QNVVAQSPTESEYRSLAHVATEVLWLQSSITELGITLPQKPVLWCDNLGAKSLASNPIF 668
Q +V++S ES YR L + E++W+QS + EL + P+LWCDN A LA+NP+F
Sbjct: 374 KQRLVSKSSAESXYRGLVSLTAELVWIQSLLQELCLPT-SPPILWCDNQSAAHLAANPVF 432
Query: 669 HARTKHIEIDVHFIREKVLNNELGVRYIPTDHQVADTLTKALNSTRFALHRSKLNV 836
H+R+KHIE+D+HFIRE VL EL + Y+P+ Q+AD TK L T+F RSKL V
Sbjct: 433 HSRSKHIELDLHFIREXVLRQELQICYVPSGDQLADIFTKHLPITQFCNLRSKLTV 488
Score = 52.8 bits (125), Expect(3) = 8e-59
Identities = 26/51 (50%), Positives = 34/51 (66%)
Frame = +1
Query: 136 TPMTSGCKLALNDSEPFSKPSDYISTIGALQSLTMTRPDISFAVNKPSQFL 288
TP G L+ +D S PS+Y T+GALQ +T+ RPDI+FAVNK QF+
Sbjct: 252 TPGRLGRTLSQSDGVSLSDPSEYRRTVGALQYVTLXRPDIAFAVNKXCQFM 302
Score = 42.4 bits (98), Expect(3) = 8e-59
Identities = 20/39 (51%), Positives = 27/39 (69%)
Frame = +3
Query: 3 LKELGPLNYFLGIEVFRDQEGIHLTQSKYILDLLQKTNM 119
L++L PL FLGI+ + +HLTQ KYI DLL++T M
Sbjct: 206 LRDLXPLXXFLGIQAHQLGSVLHLTQHKYIXDLLKRTQM 244
>gb|AAN06870.1| Putative gag-pol polyprotein [Oryza sativa Japonica Group]
gi|108706314|gb|ABF94109.1| retrotransposon protein,
putative, Ty1-copia subclass [Oryza sativa Japonica
Group]
Length = 1247
Score = 170 bits (431), Expect(3) = 1e-58
Identities = 82/176 (46%), Positives = 119/176 (67%), Gaps = 2/176 (1%)
Frame = +3
Query: 315 KQVLRYLKGTVSSPFKPCSHK--LLEGFADADRASNVDDRRSTSGYCIYLGWNLVQWSSK 488
K++LRYLK K + L+ ++DAD A ++DDRRST G+ ++LG NLV WS++
Sbjct: 1069 KRILRYLKQCTRLGLKLSKSRSMLVSAYSDADWAGSLDDRRSTGGFAVFLGDNLVSWSAR 1128
Query: 489 *QNVVAQSPTESEYRSLAHVATEVLWLQSSITELGITLPQKPVLWCDNLGAKSLASNPIF 668
Q V++S TESEY++LA+ E++W+Q+ + EL + P LWCDNLGAK L++NP+F
Sbjct: 1129 KQATVSRSSTESEYKALANATAEIMWVQTLLAELQVESPSMAKLWCDNLGAKYLSANPVF 1188
Query: 669 HARTKHIEIDVHFIREKVLNNELGVRYIPTDHQVADTLTKALNSTRFALHRSKLNV 836
HARTKHIE+D HF+RE+V L + ++PT QVAD TKAL+ + + LN+
Sbjct: 1189 HARTKHIEVDYHFVRERVSRKLLEIDFVPTGDQVADGFTKALSVRQLENFKYNLNL 1244
Score = 55.8 bits (133), Expect(3) = 1e-58
Identities = 29/57 (50%), Positives = 41/57 (71%), Gaps = 3/57 (5%)
Frame = +1
Query: 133 ATPMTSGCKLALNDSEPFSKPSD---YISTIGALQSLTMTRPDISFAVNKPSQFLQA 294
+TP+++ KL++N+ +P P+D Y S +GALQ LT+TRPDI+F VNK QFL A
Sbjct: 1004 STPLSTSEKLSINEGDPLG-PNDATHYRSVVGALQYLTLTRPDIAFPVNKVCQFLHA 1059
Score = 49.7 bits (117), Expect(3) = 1e-58
Identities = 24/39 (61%), Positives = 30/39 (76%)
Frame = +3
Query: 3 LKELGPLNYFLGIEVFRDQEGIHLTQSKYILDLLQKTNM 119
LK+LG L+YFLGIEV + GI LTQ KY+ DLL++ NM
Sbjct: 959 LKDLGDLHYFLGIEVTKVSGGIVLTQDKYVNDLLRRVNM 997
>gb|AAT07563.1| putative polyprotein [Oryza sativa Japonica Group]
gi|46981313|gb|AAT07631.1| putative polyprotein [Oryza
sativa Japonica Group]
Length = 1431
Score = 174 bits (442), Expect(3) = 2e-58
Identities = 84/176 (47%), Positives = 121/176 (68%), Gaps = 2/176 (1%)
Frame = +3
Query: 315 KQVLRYLKGTVSSPFK--PCSHKLLEGFADADRASNVDDRRSTSGYCIYLGWNLVQWSSK 488
K++LRYLK TV K + L+ F+DAD A +DDR ST G+ +++G NLV WS++
Sbjct: 1252 KRILRYLKHTVKLGLKISKSNSLLVSAFSDADWAGCLDDRHSTGGFAVFIGPNLVSWSAR 1311
Query: 489 *QNVVAQSPTESEYRSLAHVATEVLWLQSSITELGITLPQKPVLWCDNLGAKSLASNPIF 668
Q V++S TE+EY++LA+V E++W+Q+ + ELGI P+ +WCDN+GAK + +NP+F
Sbjct: 1312 KQATVSRSSTEAEYKALANVTAEIMWIQTLLHELGIQAPKIAKVWCDNIGAKYMTANPVF 1371
Query: 669 HARTKHIEIDVHFIREKVLNNELGVRYIPTDHQVADTLTKALNSTRFALHRSKLNV 836
HARTKHIE+D HF+RE+V L V YI T QVAD TK L+ + + R+ LN+
Sbjct: 1372 HARTKHIEVDYHFVRERVARKFLQVEYISTKDQVADGFTKTLSVRQLEMFRNNLNL 1427
Score = 52.0 bits (123), Expect(3) = 2e-58
Identities = 28/56 (50%), Positives = 38/56 (67%), Gaps = 3/56 (5%)
Frame = +1
Query: 136 TPMTSGCKLALNDSEPFSKPSD---YISTIGALQSLTMTRPDISFAVNKPSQFLQA 294
TP++ KL+ ++ PF P D Y S +GALQ LT+TRPD+SF+VNK Q+L A
Sbjct: 1188 TPLSISEKLSAHEGNPFG-PEDSTRYRSLVGALQYLTLTRPDLSFSVNKVCQYLHA 1242
Score = 48.5 bits (114), Expect(3) = 2e-58
Identities = 23/40 (57%), Positives = 30/40 (75%)
Frame = +3
Query: 3 LKELGPLNYFLGIEVFRDQEGIHLTQSKYILDLLQKTNMA 122
LK+LG L+YFLGIEV GI LTQ KY +D+L++ NM+
Sbjct: 1142 LKDLGRLHYFLGIEVKEVNNGIVLTQEKYAMDVLKRVNMS 1181
>gb|AAL66754.1|AF464738_5 putative copia-like retrotransposon Hopscotch polyprotein [Zea mays]
Length = 1313
Score = 169 bits (428), Expect(3) = 2e-58
Identities = 82/176 (46%), Positives = 117/176 (66%), Gaps = 2/176 (1%)
Frame = +3
Query: 315 KQVLRYLKG--TVSSPFKPCSHKLLEGFADADRASNVDDRRSTSGYCIYLGWNLVQWSSK 488
K++LRY+K + L+ F+DAD A +VDDR+ST G+ ++LG NLV WS++
Sbjct: 1135 KRILRYIKQCTNLGLHIHRSDSTLVSAFSDADWAGSVDDRKSTGGFAVFLGSNLVSWSAR 1194
Query: 489 *QNVVAQSPTESEYRSLAHVATEVLWLQSSITELGITLPQKPVLWCDNLGAKSLASNPIF 668
Q V++S TESEY++LA+ E++W+Q +TE+ I P+ LWCDNLGAK L++NPIF
Sbjct: 1195 KQPTVSRSSTESEYKALANATAELIWVQILLTEISIKSPRAAKLWCDNLGAKYLSANPIF 1254
Query: 669 HARTKHIEIDVHFIREKVLNNELGVRYIPTDHQVADTLTKALNSTRFALHRSKLNV 836
HARTKHIE+D HF+R++V L + Y+PT QVAD TK L+ + LN+
Sbjct: 1255 HARTKHIEVDYHFVRDRVAKKLLDIEYVPTGDQVADGFTKPLSVRLLENFKVNLNL 1310
Score = 54.7 bits (130), Expect(3) = 2e-58
Identities = 28/63 (44%), Positives = 43/63 (68%), Gaps = 2/63 (3%)
Frame = +1
Query: 133 ATPMTSGCKLALNDSEPFSKP--SDYISTIGALQSLTMTRPDISFAVNKPSQFLQARISL 306
+TP+++ KL++++ P + + Y S +GALQ LT+TRPDI+F+VNK QFL A +L
Sbjct: 1070 STPLSTSEKLSIHEGSPLGEKDITQYRSIVGALQYLTLTRPDIAFSVNKVCQFLHAPTTL 1129
Query: 307 ESA 315
A
Sbjct: 1130 HWA 1132
Score = 51.2 bits (121), Expect(3) = 2e-58
Identities = 25/40 (62%), Positives = 31/40 (77%)
Frame = +3
Query: 3 LKELGPLNYFLGIEVFRDQEGIHLTQSKYILDLLQKTNMA 122
LK+LG LNYFLGIEV + ++GI LTQ KY DLL+K M+
Sbjct: 1025 LKDLGDLNYFLGIEVNKVRDGIILTQDKYASDLLKKVGMS 1064