BLASTX nr result

ID: Forsythia22_contig00035154 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Forsythia22_contig00035154
         (743 letters)

Database: ./nr 
           69,698,275 sequences; 24,982,196,650 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_011069542.1| PREDICTED: sister chromatid cohesion protein...    80   2e-12
ref|XP_009608440.1| PREDICTED: sister chromatid cohesion protein...    76   2e-11
ref|XP_010322916.1| PREDICTED: sister chromatid cohesion protein...    74   7e-11
ref|XP_012854886.1| PREDICTED: sister chromatid cohesion protein...    71   6e-10

>ref|XP_011069542.1| PREDICTED: sister chromatid cohesion protein PDS5 homolog A [Sesamum
            indicum]
          Length = 1387

 Score = 79.7 bits (195), Expect = 2e-12
 Identities = 65/194 (33%), Positives = 98/194 (50%), Gaps = 19/194 (9%)
 Frame = -2

Query: 742  ENQVFSSLHRSVGLHKEFSIDDEHEVESNGNGEIIIGNQQLILSFDSATNPLLAQKDVTL 563
            + Q  S    SV LH EFS  ++HE ++N N    +G +  +    + T P LAQK+VT+
Sbjct: 1198 QTQAMSVQLGSVELHNEFSAGNKHERDANRN----MGAKSSLPCDSATTKPSLAQKEVTV 1253

Query: 562  SSSREKETITRCSIVSAEPSTFSRA--------ANHINHCSSK---DLVDLQSRHCDHGD 416
            S  RE++ +T+      +  ++S +         N ++  S K   DL DLQ ++C    
Sbjct: 1254 SCLREEDAVTKLWSRVGDQMSYSTSKVTYETGEVNTLSMDSEKWETDLDDLQVQYCSQSH 1313

Query: 415  GTSLSGQREIGDALESNNEQDKVSK------REVPQGVKMEKGRKAAIDTSASEVIDT-- 260
             +S + Q +  DA   +++Q+ + K      R+V Q VK  K  K A   S SEVIDT  
Sbjct: 1314 DSSANDQTKAVDAHRYDSKQENLPKNGDIRGRKVSQAVKRTKRCKDASGKSTSEVIDTSI 1373

Query: 259  NYDAIARRTRRRKV 218
            N D    RTRR+KV
Sbjct: 1374 NDDLQMPRTRRQKV 1387


>ref|XP_009608440.1| PREDICTED: sister chromatid cohesion protein PDS5 homolog A isoform
            X6 [Nicotiana tomentosiformis]
          Length = 1421

 Score = 76.3 bits (186), Expect = 2e-11
 Identities = 67/205 (32%), Positives = 95/205 (46%), Gaps = 36/205 (17%)
 Frame = -2

Query: 724  SLHRSVGLHKEFSIDDEHEVESNGNGEIIIGNQQLIL-SFDSATNPLLAQKDVTLSSSRE 548
            S   S  LHKEFSIDDEHE +++G  E ++  + L   S   ++ PL  +KD    S +E
Sbjct: 1219 SASASFELHKEFSIDDEHEDDAHGTIEAVVRTEHLPYHSRTRSSRPLSDKKDEHPCSLKE 1278

Query: 547  KETITRCSIVSAEPSTFSRAANHINHCSSKD-------LVDLQSRHCDHGDGTSLSGQRE 389
            K+TI+RC  +  E S  S   N  +   SK+       L+  Q   C   D    SG  E
Sbjct: 1279 KDTISRCKNIMHERSK-SGKGNRSDISISKESKNKAEKLIRQQIELCSSED-KCCSGSTE 1336

Query: 388  IGDALES----------------------NNEQDKVSKREVPQGVK------MEKGRKAA 293
              D+ ++                      + ++D +SK E   G K      ++K     
Sbjct: 1337 AFDSSDNTLKDSCGLQSRCWKSSDMIGYVSQQEDDLSKDEATFGSKKTALAEIKKRGSVL 1396

Query: 292  IDTSASEVIDTNYDAIARRTRRRKV 218
            +D+S SEVID N D IARRTR R+V
Sbjct: 1397 VDSSLSEVIDVNEDPIARRTRSRRV 1421


>ref|XP_010322916.1| PREDICTED: sister chromatid cohesion protein PDS5 homolog A isoform
            X3 [Solanum lycopersicum]
          Length = 1409

 Score = 74.3 bits (181), Expect = 7e-11
 Identities = 66/192 (34%), Positives = 90/192 (46%), Gaps = 27/192 (14%)
 Frame = -2

Query: 712  SVGLHKEFSIDDEHEVESNGNGEI-IIGNQQLILSFDSATNPLLAQKDVTLSSSREKETI 536
            S  LHKEFS+DDEHE +++G  E  I   QQ   S      P   QK+    S +E +TI
Sbjct: 1219 SFELHKEFSMDDEHEDDAHGAIEADITTEQQPHCSRTLRLRPSSDQKNEKSRSLKENDTI 1278

Query: 535  TRCSIVSAEPSTFSRAANHINHCSSKDLVDLQSRHCDHGDGT------------------ 410
            +RC  +  +PS  S   N  + C SK   D +       DG                   
Sbjct: 1279 SRCKTIMRKPSK-SVKGNSSDICISKITCDSREAEVLSLDGEIWGTSSNHSLLDQGSCGL 1337

Query: 409  -SLSGQREIGDALESNNEQ-DKVSKREVPQGVK------MEKGRKAAIDTSASEVIDTNY 254
             SL   R+  D +ES ++Q D +S+ +   G K      ++      +D+SASEVID N 
Sbjct: 1338 QSLCRPRKNIDMIESVSQQEDDLSEDKAKIGSKRTALAELKNQESVLVDSSASEVIDVNE 1397

Query: 253  DAIARRTRRRKV 218
            D IARRTR R+V
Sbjct: 1398 DFIARRTRSRRV 1409


>ref|XP_012854886.1| PREDICTED: sister chromatid cohesion protein PDS5 homolog A
            [Erythranthe guttatus]
          Length = 1353

 Score = 71.2 bits (173), Expect = 6e-10
 Identities = 53/170 (31%), Positives = 87/170 (51%), Gaps = 21/170 (12%)
 Frame = -2

Query: 706  GLHKEFSIDDEHEVESNGNGEIIIGNQQLILSFDSATNPLLAQKDVTLSSSREKETITRC 527
            G H  FS +++HE +   N    + ++       + T P L+QK+VT+S SRE++T+   
Sbjct: 1188 GRHNTFSAENKHERDPCRN----LRSKPTFPCNSATTKPSLSQKNVTVSCSREEDTVNES 1243

Query: 526  SIVSAEPSTFSRAANHINHCSSK-------------DLVDLQSRHCDHGDGTSLSGQREI 386
                 EPS  SRA + + H + +             DL DLQ++ CD+G G+S + + ++
Sbjct: 1244 GTNCTEPSKSSRAGDQVIHETEEVDILSLDSEMCETDLDDLQAQRCDYGGGSSANDEDKL 1303

Query: 385  GDA-----LESN--NEQDKVSKREVPQGVKMEKG-RKAAIDTSASEVIDT 260
             DA     ++ N   +++K  ++   Q VK  K    AAI +  SEVIDT
Sbjct: 1304 LDAQGFDSIQENLPRKRNKSVRKASSQAVKRSKRCEDAAIGSLTSEVIDT 1353


Top