BLASTX nr result
ID: Forsythia22_contig00034351
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Forsythia22_contig00034351
(293 letters)
Database: ./nr
69,698,275 sequences; 24,982,196,650 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|AAT01387.1| putative polyprotein [Oryza sativa Japonica Group... 50 2e-06
ref|XP_010676254.1| PREDICTED: uncharacterized protein LOC104892... 49 3e-06
gb|AAX92861.1| retrotransposon protein, putative, Ty1-copia sub-... 49 5e-06
emb|CAH66122.1| OSIGBa0146N20.7 [Oryza sativa Indica Group] 49 5e-06
gb|ABA98656.1| retrotransposon protein, putative, Ty1-copia subc... 49 5e-06
gb|AAR87163.1| putative polyprotein [Oryza sativa Japonica Group... 50 6e-06
gb|ABA97637.1| retrotransposon protein, putative, Ty1-copia subc... 50 8e-06
emb|CAE03834.3| OSJNBb0013J13.11 [Oryza sativa Japonica Group] 50 9e-06
emb|CAN77425.1| hypothetical protein VITISV_041980 [Vitis vinifera] 46 1e-05
>gb|AAT01387.1| putative polyprotein [Oryza sativa Japonica Group]
gi|48475101|gb|AAT44170.1| putative polyprotein [Oryza
sativa Japonica Group]
Length = 1175
Score = 50.4 bits (119), Expect(2) = 2e-06
Identities = 20/30 (66%), Positives = 26/30 (86%)
Frame = +1
Query: 31 KQSPRQWYERFDSFVLTSGFQISKLDRCLY 120
KQSPRQWY+RFDSF+L+ GF+ S+ D C+Y
Sbjct: 813 KQSPRQWYKRFDSFMLSHGFKRSEFDSCVY 842
Score = 27.3 bits (59), Expect(2) = 2e-06
Identities = 16/34 (47%), Positives = 20/34 (58%), Gaps = 2/34 (5%)
Frame = +3
Query: 198 KMINQIKTALCS--DMKDLENVKRILNMEIENFR 293
+ I +K L S DMKDL+ K+IL MEI R
Sbjct: 868 EQITTLKKQLSSEFDMKDLDAAKKILGMEITRDR 901
>ref|XP_010676254.1| PREDICTED: uncharacterized protein LOC104892119 [Beta vulgaris subsp.
vulgaris]
Length = 1947
Score = 49.3 bits (116), Expect(3) = 3e-06
Identities = 20/31 (64%), Positives = 24/31 (77%)
Frame = +1
Query: 31 KQSPRQWYERFDSFVLTSGFQISKLDRCLYH 123
KQSPRQWY+RFDSF++ GF S D C+YH
Sbjct: 1058 KQSPRQWYKRFDSFMVEHGFDRSPYDCCVYH 1088
Score = 24.3 bits (51), Expect(3) = 3e-06
Identities = 11/16 (68%), Positives = 12/16 (75%)
Frame = +3
Query: 234 DMKDLENVKRILNMEI 281
DMKDL K+IL MEI
Sbjct: 1128 DMKDLGAAKKILGMEI 1143
Score = 22.7 bits (47), Expect(3) = 3e-06
Identities = 9/19 (47%), Positives = 13/19 (68%)
Frame = +2
Query: 149 VFLLQDVDDMLLICSNKND 205
++LL VDDML+ K+D
Sbjct: 1097 IYLLLYVDDMLIAAKKKSD 1115
>gb|AAX92861.1| retrotransposon protein, putative, Ty1-copia sub-class [Oryza sativa
Japonica Group] gi|77549942|gb|ABA92739.1|
retrotransposon protein, putative, Ty1-copia subclass
[Oryza sativa Japonica Group]
Length = 1373
Score = 48.9 bits (115), Expect(2) = 5e-06
Identities = 22/43 (51%), Positives = 31/43 (72%)
Frame = +1
Query: 31 KQSPRQWYERFDSFVLTSGFQISKLDRCLYHQHHDVNNECVFI 159
KQSPRQW +RFDSF+L+ F+ SK D C+Y +H VN +++
Sbjct: 971 KQSPRQWNKRFDSFMLSHSFKRSKYDSCVYIKH--VNGSPIYL 1011
Score = 27.7 bits (60), Expect(2) = 5e-06
Identities = 16/32 (50%), Positives = 20/32 (62%), Gaps = 2/32 (6%)
Frame = +3
Query: 204 INQIKTALCS--DMKDLENVKRILNMEIENFR 293
I ++K L S DMKDL + K+IL MEI R
Sbjct: 1028 ITKLKKLLSSEFDMKDLGSAKKILGMEISRDR 1059
>emb|CAH66122.1| OSIGBa0146N20.7 [Oryza sativa Indica Group]
Length = 1335
Score = 48.9 bits (115), Expect(2) = 5e-06
Identities = 22/43 (51%), Positives = 31/43 (72%)
Frame = +1
Query: 31 KQSPRQWYERFDSFVLTSGFQISKLDRCLYHQHHDVNNECVFI 159
KQSPRQW +RFDSF+L+ F+ SK D C+Y +H VN +++
Sbjct: 973 KQSPRQWNKRFDSFMLSHSFKRSKYDSCVYIKH--VNGSPIYL 1013
Score = 27.7 bits (60), Expect(2) = 5e-06
Identities = 16/32 (50%), Positives = 20/32 (62%), Gaps = 2/32 (6%)
Frame = +3
Query: 204 INQIKTALCS--DMKDLENVKRILNMEIENFR 293
I ++K L S DMKDL + K+IL MEI R
Sbjct: 1030 ITKLKKLLSSEFDMKDLGSAKKILGMEISRDR 1061
>gb|ABA98656.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
Japonica Group]
Length = 1333
Score = 48.9 bits (115), Expect(2) = 5e-06
Identities = 22/43 (51%), Positives = 31/43 (72%)
Frame = +1
Query: 31 KQSPRQWYERFDSFVLTSGFQISKLDRCLYHQHHDVNNECVFI 159
KQSPRQW +RFDSF+L+ F+ SK D C+Y +H VN +++
Sbjct: 971 KQSPRQWNKRFDSFMLSHSFKRSKYDSCVYIKH--VNGSPIYL 1011
Score = 27.7 bits (60), Expect(2) = 5e-06
Identities = 16/32 (50%), Positives = 20/32 (62%), Gaps = 2/32 (6%)
Frame = +3
Query: 204 INQIKTALCS--DMKDLENVKRILNMEIENFR 293
I ++K L S DMKDL + K+IL MEI R
Sbjct: 1028 ITKLKKLLSSEFDMKDLGSAKKILGMEISRDR 1059
>gb|AAR87163.1| putative polyprotein [Oryza sativa Japonica Group]
gi|53370655|gb|AAU89150.1| integrase core domain
containing protein [Oryza sativa Japonica Group]
gi|108710286|gb|ABF98081.1| retrotransposon protein,
putative, Ty1-copia subclass [Oryza sativa Japonica
Group]
Length = 1322
Score = 50.4 bits (119), Expect(2) = 6e-06
Identities = 20/30 (66%), Positives = 26/30 (86%)
Frame = +1
Query: 31 KQSPRQWYERFDSFVLTSGFQISKLDRCLY 120
KQSPRQWY+RFDSF+L+ GF+ S+ D C+Y
Sbjct: 960 KQSPRQWYKRFDSFMLSHGFKRSEFDSCVY 989
Score = 25.8 bits (55), Expect(2) = 6e-06
Identities = 16/34 (47%), Positives = 19/34 (55%), Gaps = 2/34 (5%)
Frame = +3
Query: 198 KMINQIKTALCS--DMKDLENVKRILNMEIENFR 293
+ I +K L S DMKDL K+IL MEI R
Sbjct: 1015 EQITTLKKQLSSEFDMKDLGAAKKILGMEITRDR 1048
>gb|ABA97637.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
Japonica Group]
Length = 1278
Score = 50.4 bits (119), Expect(2) = 8e-06
Identities = 20/30 (66%), Positives = 26/30 (86%)
Frame = +1
Query: 31 KQSPRQWYERFDSFVLTSGFQISKLDRCLY 120
KQSPRQWY+RFDSF+L+ GF+ S+ D C+Y
Sbjct: 960 KQSPRQWYKRFDSFMLSHGFKRSEFDSCVY 989
Score = 25.4 bits (54), Expect(2) = 8e-06
Identities = 15/30 (50%), Positives = 18/30 (60%), Gaps = 2/30 (6%)
Frame = +3
Query: 198 KMINQIKTALCS--DMKDLENVKRILNMEI 281
+ I +K L S DMKDL K+IL MEI
Sbjct: 1015 EQITTLKKQLSSEFDMKDLGAAKKILGMEI 1044
>emb|CAE03834.3| OSJNBb0013J13.11 [Oryza sativa Japonica Group]
Length = 576
Score = 50.4 bits (119), Expect(2) = 9e-06
Identities = 20/30 (66%), Positives = 26/30 (86%)
Frame = +1
Query: 31 KQSPRQWYERFDSFVLTSGFQISKLDRCLY 120
KQSPRQWY+RFDSF+L+ GF+ S+ D C+Y
Sbjct: 293 KQSPRQWYKRFDSFMLSHGFKWSEFDSCVY 322
Score = 25.4 bits (54), Expect(2) = 9e-06
Identities = 15/30 (50%), Positives = 18/30 (60%), Gaps = 2/30 (6%)
Frame = +3
Query: 198 KMINQIKTALCS--DMKDLENVKRILNMEI 281
+ I +K L S DMKDL K+IL MEI
Sbjct: 348 EQITTLKKQLSSEFDMKDLGAAKKILGMEI 377
>emb|CAN77425.1| hypothetical protein VITISV_041980 [Vitis vinifera]
Length = 367
Score = 46.2 bits (108), Expect(3) = 1e-05
Identities = 17/43 (39%), Positives = 32/43 (74%)
Frame = +1
Query: 31 KQSPRQWYERFDSFVLTSGFQISKLDRCLYHQHHDVNNECVFI 159
KQSPRQWY+RF+S+++ G++ + D C+Y ++ D ++ +F+
Sbjct: 44 KQSPRQWYKRFESYIIRIGYKRCEYDCCVYVKNLDDDSSFIFL 86
Score = 27.7 bits (60), Expect(3) = 1e-05
Identities = 15/32 (46%), Positives = 20/32 (62%), Gaps = 2/32 (6%)
Frame = +3
Query: 204 INQIKTALCS--DMKDLENVKRILNMEIENFR 293
+N++K+ L DMKDL K+IL MEI R
Sbjct: 103 VNKLKSLLSKEFDMKDLGATKKILGMEIHGDR 134
Score = 20.8 bits (42), Expect(3) = 1e-05
Identities = 8/13 (61%), Positives = 11/13 (84%)
Frame = +2
Query: 149 VFLLQDVDDMLLI 187
+FLL VDDML++
Sbjct: 84 IFLLLYVDDMLIV 96