BLASTX nr result

ID: Forsythia22_contig00034214 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Forsythia22_contig00034214
         (250 letters)

Database: ./nr 
           69,698,275 sequences; 24,982,196,650 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|YP_173441.1| hypothetical protein NitaMp103 [Nicotiana tabac...    62   1e-07
ref|YP_002608343.1| orf106 [Vitis vinifera] gi|209954139|emb|CAQ...    62   2e-07
emb|CBI33439.3| unnamed protein product [Vitis vinifera]               60   6e-07

>ref|YP_173441.1| hypothetical protein NitaMp103 [Nicotiana tabacum]
           gi|56806605|dbj|BAD83506.1| hypothetical protein
           (mitochondrion) [Nicotiana tabacum]
          Length = 144

 Score = 62.4 bits (150), Expect = 1e-07
 Identities = 38/67 (56%), Positives = 47/67 (70%), Gaps = 5/67 (7%)
 Frame = -3

Query: 197 SLIHSWDRQSFVKLNDKL-QISNAHNVHL----GFRLNLIAYLSGANKRESFCMGLSSDA 33
           SL H  ++ SF   + +L ++ +  N +L    GFRLNLIAYLSGANKRESF MG SSDA
Sbjct: 40  SLSHYSEQWSFRSRSSRLTRLGSRSNRNLYALVGFRLNLIAYLSGANKRESFRMGSSSDA 99

Query: 32  EQIREGE 12
           E +REGE
Sbjct: 100 EPMREGE 106


>ref|YP_002608343.1| orf106 [Vitis vinifera] gi|209954139|emb|CAQ77566.1| orf106 [Vitis
           vinifera] gi|239764755|gb|ACS15225.1| ORF106 [Vitis
           vinifera]
          Length = 105

 Score = 61.6 bits (148), Expect = 2e-07
 Identities = 39/66 (59%), Positives = 45/66 (68%), Gaps = 5/66 (7%)
 Frame = -3

Query: 197 SLIHSWDRQSFVKLNDKLQISNAH-NVHL----GFRLNLIAYLSGANKRESFCMGLSSDA 33
           SL H  ++ SF     +L  S +  N+HL    GFRLNLIAYLSGANKRESF MG SSDA
Sbjct: 40  SLSHYSEQWSFRSRCYRLPRSGSRSNLHLYALVGFRLNLIAYLSGANKRESFRMGSSSDA 99

Query: 32  EQIREG 15
           E +REG
Sbjct: 100 EPMREG 105


>emb|CBI33439.3| unnamed protein product [Vitis vinifera]
          Length = 60

 Score = 60.1 bits (144), Expect = 6e-07
 Identities = 32/41 (78%), Positives = 34/41 (82%), Gaps = 4/41 (9%)
 Frame = -3

Query: 125 NVHL----GFRLNLIAYLSGANKRESFCMGLSSDAEQIREG 15
           N+HL    GFRLNLIAYLSGANKRESF MG SSDAE +REG
Sbjct: 20  NLHLYALVGFRLNLIAYLSGANKRESFRMGSSSDAEPMREG 60


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