BLASTX nr result
ID: Forsythia22_contig00032617
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Forsythia22_contig00032617
(1304 letters)
Database: ./nr
69,698,275 sequences; 24,982,196,650 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_011081158.1| PREDICTED: DNA-directed RNA polymerase IV su... 440 e-120
ref|XP_012835484.1| PREDICTED: DNA-directed RNA polymerase IV su... 428 e-117
gb|EYU38999.1| hypothetical protein MIMGU_mgv1a000239mg [Erythra... 428 e-117
emb|CDP09818.1| unnamed protein product [Coffea canephora] 416 e-113
gb|AAY89361.1| RNA polymerase IV largest subunit [Antirrhinum ma... 394 e-107
ref|XP_009797468.1| PREDICTED: DNA-directed RNA polymerase IV su... 392 e-106
ref|XP_009797463.1| PREDICTED: DNA-directed RNA polymerase IV su... 392 e-106
ref|XP_009593318.1| PREDICTED: DNA-directed RNA polymerase IV su... 389 e-105
ref|XP_009593317.1| PREDICTED: DNA-directed RNA polymerase IV su... 389 e-105
ref|XP_010053343.1| PREDICTED: DNA-directed RNA polymerase IV su... 382 e-103
ref|XP_006358859.1| PREDICTED: DNA-directed RNA polymerase IV su... 370 e-99
ref|XP_006358858.1| PREDICTED: DNA-directed RNA polymerase IV su... 370 e-99
ref|XP_010661376.1| PREDICTED: DNA-directed RNA polymerase IV su... 370 2e-99
ref|XP_010661369.1| PREDICTED: DNA-directed RNA polymerase IV su... 370 2e-99
ref|XP_010661365.1| PREDICTED: DNA-directed RNA polymerase IV su... 370 2e-99
emb|CBI34757.3| unnamed protein product [Vitis vinifera] 370 2e-99
gb|EPS74753.1| hypothetical protein M569_00001, partial [Genlise... 369 2e-99
ref|XP_007040111.1| DNA-directed RNA polymerase II subunit RPB1-... 363 2e-97
ref|XP_010325436.1| PREDICTED: DNA-directed RNA polymerase IV su... 350 1e-93
ref|XP_004245657.1| PREDICTED: DNA-directed RNA polymerase IV su... 350 1e-93
>ref|XP_011081158.1| PREDICTED: DNA-directed RNA polymerase IV subunit 1 [Sesamum indicum]
Length = 1408
Score = 440 bits (1132), Expect = e-120
Identities = 217/323 (67%), Positives = 254/323 (78%)
Frame = -1
Query: 1304 SEHCDRTKFWSILNDNCFRIRNIIDWERSHPDDIHDISQVYGIDVAWKYFFNSLNSAICD 1125
SE+CDRTKFWSIL D C RIRNIIDWERSHPDDIHD S+ YGID AW+ F NSL+SAI D
Sbjct: 1081 SEYCDRTKFWSILKDKCLRIRNIIDWERSHPDDIHDYSEAYGIDTAWQCFVNSLHSAISD 1140
Query: 1124 TGKTILPEHLVVTANCLSATGEFVALNAKGLAQQRKETSVSSPFSQACFLNPSDCFVKAA 945
TGKTILPEHLVVTANCLS TGEF+ LNAKGL+ QRKE ++ +PFSQACFLNPSDC VKAA
Sbjct: 1141 TGKTILPEHLVVTANCLSTTGEFLPLNAKGLSLQRKEANIQAPFSQACFLNPSDCLVKAA 1200
Query: 944 KTGQTDGLQGSLEALAWGQTPSVGTGCRFDIIYNGKGHEPAEPTDVYSLLSIHADSTKQN 765
K GQ D LQGSLEAL+WGQTPS+GTGC+FDI+YNGKGHEP +PTDVY+LLS H K N
Sbjct: 1201 KMGQLDALQGSLEALSWGQTPSIGTGCQFDIMYNGKGHEPEKPTDVYTLLSNHVRCAKPN 1260
Query: 764 AKIKLPMKHKETPGKSFTEFLLKEKGRKKMLTDTYSQYVVVDDIQRISRALQRILHEYPV 585
KH + + K R+ ++ SQ+ V IQ+IS+ L+R+L EYP+
Sbjct: 1261 D----VAKHLSVRPNGLSPNI---KQRQTLVKRMVSQHFSVVGIQKISQRLKRMLKEYPM 1313
Query: 584 DYQLTGEDKSAAMRALQFHPRSKEKIGIGAMEIKVGRHPKHVESRCFLLVRTDGTVEDFS 405
+ QL GEDKS AMRALQFHPR +EKIG G M+IKVGRHP H ES CF+L+RTDGT EDFS
Sbjct: 1314 NSQLNGEDKSTAMRALQFHPRWEEKIGTGVMDIKVGRHPDHKES-CFVLIRTDGTEEDFS 1372
Query: 404 YHKCIHHALELITPQKAKAYHSR 336
Y+KCIH+AL+++ P+KAKAY SR
Sbjct: 1373 YNKCIHNALQIVAPEKAKAYLSR 1395
>ref|XP_012835484.1| PREDICTED: DNA-directed RNA polymerase IV subunit 1 [Erythranthe
guttatus] gi|848869730|ref|XP_012835485.1| PREDICTED:
DNA-directed RNA polymerase IV subunit 1 [Erythranthe
guttatus] gi|848869733|ref|XP_012835486.1| PREDICTED:
DNA-directed RNA polymerase IV subunit 1 [Erythranthe
guttatus]
Length = 1447
Score = 428 bits (1101), Expect = e-117
Identities = 212/323 (65%), Positives = 251/323 (77%)
Frame = -1
Query: 1304 SEHCDRTKFWSILNDNCFRIRNIIDWERSHPDDIHDISQVYGIDVAWKYFFNSLNSAICD 1125
SE+C+RTKFWSIL D C IRNIIDW++SHPDDI DIS+ YG+D AW+ F SL+SAI
Sbjct: 1119 SEYCERTKFWSILKDKCLPIRNIIDWKQSHPDDILDISEAYGVDAAWQCFVTSLHSAISG 1178
Query: 1124 TGKTILPEHLVVTANCLSATGEFVALNAKGLAQQRKETSVSSPFSQACFLNPSDCFVKAA 945
TGK ILPEHL++TANCLSATGEFV LNAKGLA QRKE +V SPF+Q C NPSDCF+KAA
Sbjct: 1179 TGKPILPEHLILTANCLSATGEFVPLNAKGLALQRKEANVHSPFNQGCLSNPSDCFLKAA 1238
Query: 944 KTGQTDGLQGSLEALAWGQTPSVGTGCRFDIIYNGKGHEPAEPTDVYSLLSIHADSTKQN 765
K GQ DGLQGSLEALAWGQTP +GTGCRFDI+YNGKGH PA+ DVYSLLS HA+ K N
Sbjct: 1239 KMGQMDGLQGSLEALAWGQTPPIGTGCRFDIVYNGKGHIPAKNADVYSLLSTHAERAKPN 1298
Query: 764 AKIKLPMKHKETPGKSFTEFLLKEKGRKKMLTDTYSQYVVVDDIQRISRALQRILHEYPV 585
A +P K+ G S + + KG K +L SQ + IQ+IS+ L+R+L +YP+
Sbjct: 1299 A---MP---KQVSGISISSYHFNTKGCKTLLRRMVSQNFSMVGIQKISQRLKRMLKQYPM 1352
Query: 584 DYQLTGEDKSAAMRALQFHPRSKEKIGIGAMEIKVGRHPKHVESRCFLLVRTDGTVEDFS 405
+ QLTGED+S A+RALQFHP+ K+KIG G EIKVGRHP+H E+ CF LVRTDGT EDFS
Sbjct: 1353 NSQLTGEDRSTAIRALQFHPQWKDKIGSGVSEIKVGRHPEHKET-CFFLVRTDGTEEDFS 1411
Query: 404 YHKCIHHALELITPQKAKAYHSR 336
Y+KCI HALE+I P+KAK Y SR
Sbjct: 1412 YNKCIRHALEIIAPEKAKGYRSR 1434
>gb|EYU38999.1| hypothetical protein MIMGU_mgv1a000239mg [Erythranthe guttata]
Length = 1379
Score = 428 bits (1101), Expect = e-117
Identities = 212/323 (65%), Positives = 251/323 (77%)
Frame = -1
Query: 1304 SEHCDRTKFWSILNDNCFRIRNIIDWERSHPDDIHDISQVYGIDVAWKYFFNSLNSAICD 1125
SE+C+RTKFWSIL D C IRNIIDW++SHPDDI DIS+ YG+D AW+ F SL+SAI
Sbjct: 1051 SEYCERTKFWSILKDKCLPIRNIIDWKQSHPDDILDISEAYGVDAAWQCFVTSLHSAISG 1110
Query: 1124 TGKTILPEHLVVTANCLSATGEFVALNAKGLAQQRKETSVSSPFSQACFLNPSDCFVKAA 945
TGK ILPEHL++TANCLSATGEFV LNAKGLA QRKE +V SPF+Q C NPSDCF+KAA
Sbjct: 1111 TGKPILPEHLILTANCLSATGEFVPLNAKGLALQRKEANVHSPFNQGCLSNPSDCFLKAA 1170
Query: 944 KTGQTDGLQGSLEALAWGQTPSVGTGCRFDIIYNGKGHEPAEPTDVYSLLSIHADSTKQN 765
K GQ DGLQGSLEALAWGQTP +GTGCRFDI+YNGKGH PA+ DVYSLLS HA+ K N
Sbjct: 1171 KMGQMDGLQGSLEALAWGQTPPIGTGCRFDIVYNGKGHIPAKNADVYSLLSTHAERAKPN 1230
Query: 764 AKIKLPMKHKETPGKSFTEFLLKEKGRKKMLTDTYSQYVVVDDIQRISRALQRILHEYPV 585
A +P K+ G S + + KG K +L SQ + IQ+IS+ L+R+L +YP+
Sbjct: 1231 A---MP---KQVSGISISSYHFNTKGCKTLLRRMVSQNFSMVGIQKISQRLKRMLKQYPM 1284
Query: 584 DYQLTGEDKSAAMRALQFHPRSKEKIGIGAMEIKVGRHPKHVESRCFLLVRTDGTVEDFS 405
+ QLTGED+S A+RALQFHP+ K+KIG G EIKVGRHP+H E+ CF LVRTDGT EDFS
Sbjct: 1285 NSQLTGEDRSTAIRALQFHPQWKDKIGSGVSEIKVGRHPEHKET-CFFLVRTDGTEEDFS 1343
Query: 404 YHKCIHHALELITPQKAKAYHSR 336
Y+KCI HALE+I P+KAK Y SR
Sbjct: 1344 YNKCIRHALEIIAPEKAKGYRSR 1366
>emb|CDP09818.1| unnamed protein product [Coffea canephora]
Length = 1511
Score = 416 bits (1070), Expect = e-113
Identities = 210/335 (62%), Positives = 252/335 (75%), Gaps = 8/335 (2%)
Frame = -1
Query: 1304 SEHCDRTKFWSILNDNCFRIRNIIDWERSHPDDIHDISQVYGIDVAWKYFFNSLNSAICD 1125
SE CDRTKFWS+L DNC RIR++IDWERSHPDDIHD++ YGID A +F +SLNSAI D
Sbjct: 1168 SEKCDRTKFWSVLVDNCLRIRDLIDWERSHPDDIHDMAPAYGIDAAVNHFLSSLNSAISD 1227
Query: 1124 TGKTILPEHLVVTANCLSATGEFVALNAKGLAQQRKETSVSSPFSQACFLNPSDCFVKAA 945
TGKTILPEHLV+TA+CLSATGEFVALNAKGLAQQRKET+VSSPF QACF +P DCFV+AA
Sbjct: 1228 TGKTILPEHLVLTADCLSATGEFVALNAKGLAQQRKETAVSSPFLQACFSSPGDCFVRAA 1287
Query: 944 KTGQTDGLQGSLEALAWGQTPSVGTGCRFDIIYNGKGHEPAEPTDVYSLLSIHADSTKQN 765
KTG D LQG+++ALAWG PS+GTG RFDIIY+GKGHEPA+ DVY LL N
Sbjct: 1288 KTGIVDNLQGTVDALAWGMVPSIGTGARFDIIYSGKGHEPAKSIDVYDLL---GSIVNLN 1344
Query: 764 AKIKLPMKHKETPGKSFTEFL-----LKEKG---RKKMLTDTYSQYVVVDDIQRISRALQ 609
++K P K E GKS + L L KG + +L + +S + DIQ++S +L+
Sbjct: 1345 QQVKFPNKDYEMSGKSIVQHLFAYDDLATKGCILPRTLLRNFFS----LKDIQKLSHSLK 1400
Query: 608 RILHEYPVDYQLTGEDKSAAMRALQFHPRSKEKIGIGAMEIKVGRHPKHVESRCFLLVRT 429
+L++Y VD QL+ DK+ M AL FHPRS EKIGIGA EIKVG H ++ SRCF+LVR
Sbjct: 1401 HMLNKYDVDCQLSEIDKTIVMAALSFHPRSSEKIGIGAHEIKVGYHSEYDNSRCFVLVRK 1460
Query: 428 DGTVEDFSYHKCIHHALELITPQKAKAYHSRWLNG 324
DGTV DFSYHKC+H+AL+LI P AK Y S+WLNG
Sbjct: 1461 DGTVADFSYHKCVHNALQLIAPDWAKKYESKWLNG 1495
>gb|AAY89361.1| RNA polymerase IV largest subunit [Antirrhinum majus]
Length = 1112
Score = 394 bits (1012), Expect = e-107
Identities = 190/305 (62%), Positives = 235/305 (77%)
Frame = -1
Query: 1304 SEHCDRTKFWSILNDNCFRIRNIIDWERSHPDDIHDISQVYGIDVAWKYFFNSLNSAICD 1125
SE+C+R +FW+IL + RIR++IDW+RSHPDD+HD + +GID AW F NSLNSAI +
Sbjct: 801 SENCERARFWNILVEKSLRIRSLIDWDRSHPDDVHDYGEAFGIDTAWMCFVNSLNSAISE 860
Query: 1124 TGKTILPEHLVVTANCLSATGEFVALNAKGLAQQRKETSVSSPFSQACFLNPSDCFVKAA 945
TGKTILPEHL+ TANCLS TGEFV+LNAKGLAQQRKE +++SPF QACF NPSDCF+KAA
Sbjct: 861 TGKTILPEHLIATANCLSMTGEFVSLNAKGLAQQRKEATINSPFVQACFSNPSDCFIKAA 920
Query: 944 KTGQTDGLQGSLEALAWGQTPSVGTGCRFDIIYNGKGHEPAEPTDVYSLLSIHADSTKQN 765
K GQ D LQGS+++LAWGQTP +GTG +FDIIY+GKGHEP++PTDVYSLL+ K +
Sbjct: 921 KMGQMDNLQGSVDSLAWGQTPPIGTGGQFDIIYSGKGHEPSKPTDVYSLLNSQVGFAKPS 980
Query: 764 AKIKLPMKHKETPGKSFTEFLLKEKGRKKMLTDTYSQYVVVDDIQRISRALQRILHEYPV 585
KIKLP++ T G ++ LK GRK+ L S D+I+ +S AL+R+LHEY
Sbjct: 981 EKIKLPVQF--TSGNDQSQ-NLKTNGRKRFLAGMKSLRSAEDEIREVSLALKRMLHEYAS 1037
Query: 584 DYQLTGEDKSAAMRALQFHPRSKEKIGIGAMEIKVGRHPKHVESRCFLLVRTDGTVEDFS 405
D QL GEDK+ A+RALQ+HPR +EK G G +EIKVGRHP H ESRCF +V+TDGT ED S
Sbjct: 1038 DCQLRGEDKTLALRALQYHPRWEEKTGAGTVEIKVGRHPDHKESRCFFVVKTDGTEEDIS 1097
Query: 404 YHKCI 390
Y K I
Sbjct: 1098 YRKSI 1102
>ref|XP_009797468.1| PREDICTED: DNA-directed RNA polymerase IV subunit 1 isoform X2
[Nicotiana sylvestris]
Length = 1254
Score = 392 bits (1007), Expect = e-106
Identities = 193/334 (57%), Positives = 243/334 (72%), Gaps = 6/334 (1%)
Frame = -1
Query: 1304 SEHCDRTKFWSILNDNCFRIRNIIDWERSHPDDIHDISQVYGIDVAWKYFFNSLNSAICD 1125
SE CDR FW+ L D+C I ++IDWE SHPD++HD++ YG+DVAWKYF +LNSA+ +
Sbjct: 910 SESCDRNNFWNALVDSCLHIMDLIDWEWSHPDNVHDLTVAYGVDVAWKYFLRNLNSAVSE 969
Query: 1124 TGKTILPEHLVVTANCLSATGEFVALNAKGLAQQRKETSVSSPFSQACFLNPSDCFVKAA 945
TGK ILPEHLV+ A+CL+ATGEFV LN KGLAQQRK V SPF QACF +P D FV+AA
Sbjct: 970 TGKKILPEHLVLAADCLTATGEFVPLNTKGLAQQRKCAGVISPFMQACFSHPGDSFVRAA 1029
Query: 944 KTGQTDGLQGSLEALAWGQTPSVGTGCRFDIIYNGKGHEPAEPTDVYSLLSIHADSTKQN 765
KT +D LQGSLEALAWG+TPS GTG FDIIY+GKG+EPA PTDVY+LL H S KQ
Sbjct: 1030 KTELSDDLQGSLEALAWGKTPSTGTGFSFDIIYSGKGYEPAAPTDVYALLGNHVTSNKQQ 1089
Query: 764 AKIKLPMKHKETPGKSFTEFLLK------EKGRKKMLTDTYSQYVVVDDIQRISRALQRI 603
K+ L + ET K+ L K ++ + + ++ +DI+++S+AL+++
Sbjct: 1090 VKVTLD-EDNETADKALARRLCKLDDLNTKRCKSQWSIANLRSFLSFNDIKKLSQALKQM 1148
Query: 602 LHEYPVDYQLTGEDKSAAMRALQFHPRSKEKIGIGAMEIKVGRHPKHVESRCFLLVRTDG 423
L +Y +D +L+ DKS M AL FHPR EKIG GAMEIK+G H ++ +SRCF+LVRTDG
Sbjct: 1149 LSKYAIDRELSEADKSIVMMALHFHPRRSEKIGKGAMEIKIGYHKEYEDSRCFMLVRTDG 1208
Query: 422 TVEDFSYHKCIHHALELITPQKAKAYHSRWLNGA 321
TVEDFSY KC+ HALELI PQKAK Y +WLNGA
Sbjct: 1209 TVEDFSYRKCLQHALELIAPQKAKTY--KWLNGA 1240
>ref|XP_009797463.1| PREDICTED: DNA-directed RNA polymerase IV subunit 1 isoform X1
[Nicotiana sylvestris] gi|698503797|ref|XP_009797464.1|
PREDICTED: DNA-directed RNA polymerase IV subunit 1
isoform X1 [Nicotiana sylvestris]
gi|698503800|ref|XP_009797465.1| PREDICTED: DNA-directed
RNA polymerase IV subunit 1 isoform X1 [Nicotiana
sylvestris] gi|698503802|ref|XP_009797466.1| PREDICTED:
DNA-directed RNA polymerase IV subunit 1 isoform X1
[Nicotiana sylvestris] gi|698503804|ref|XP_009797467.1|
PREDICTED: DNA-directed RNA polymerase IV subunit 1
isoform X1 [Nicotiana sylvestris]
Length = 1447
Score = 392 bits (1007), Expect = e-106
Identities = 193/334 (57%), Positives = 243/334 (72%), Gaps = 6/334 (1%)
Frame = -1
Query: 1304 SEHCDRTKFWSILNDNCFRIRNIIDWERSHPDDIHDISQVYGIDVAWKYFFNSLNSAICD 1125
SE CDR FW+ L D+C I ++IDWE SHPD++HD++ YG+DVAWKYF +LNSA+ +
Sbjct: 1103 SESCDRNNFWNALVDSCLHIMDLIDWEWSHPDNVHDLTVAYGVDVAWKYFLRNLNSAVSE 1162
Query: 1124 TGKTILPEHLVVTANCLSATGEFVALNAKGLAQQRKETSVSSPFSQACFLNPSDCFVKAA 945
TGK ILPEHLV+ A+CL+ATGEFV LN KGLAQQRK V SPF QACF +P D FV+AA
Sbjct: 1163 TGKKILPEHLVLAADCLTATGEFVPLNTKGLAQQRKCAGVISPFMQACFSHPGDSFVRAA 1222
Query: 944 KTGQTDGLQGSLEALAWGQTPSVGTGCRFDIIYNGKGHEPAEPTDVYSLLSIHADSTKQN 765
KT +D LQGSLEALAWG+TPS GTG FDIIY+GKG+EPA PTDVY+LL H S KQ
Sbjct: 1223 KTELSDDLQGSLEALAWGKTPSTGTGFSFDIIYSGKGYEPAAPTDVYALLGNHVTSNKQQ 1282
Query: 764 AKIKLPMKHKETPGKSFTEFLLK------EKGRKKMLTDTYSQYVVVDDIQRISRALQRI 603
K+ L + ET K+ L K ++ + + ++ +DI+++S+AL+++
Sbjct: 1283 VKVTLD-EDNETADKALARRLCKLDDLNTKRCKSQWSIANLRSFLSFNDIKKLSQALKQM 1341
Query: 602 LHEYPVDYQLTGEDKSAAMRALQFHPRSKEKIGIGAMEIKVGRHPKHVESRCFLLVRTDG 423
L +Y +D +L+ DKS M AL FHPR EKIG GAMEIK+G H ++ +SRCF+LVRTDG
Sbjct: 1342 LSKYAIDRELSEADKSIVMMALHFHPRRSEKIGKGAMEIKIGYHKEYEDSRCFMLVRTDG 1401
Query: 422 TVEDFSYHKCIHHALELITPQKAKAYHSRWLNGA 321
TVEDFSY KC+ HALELI PQKAK Y +WLNGA
Sbjct: 1402 TVEDFSYRKCLQHALELIAPQKAKTY--KWLNGA 1433
>ref|XP_009593318.1| PREDICTED: DNA-directed RNA polymerase IV subunit 1 isoform X2
[Nicotiana tomentosiformis]
Length = 1211
Score = 389 bits (998), Expect = e-105
Identities = 191/334 (57%), Positives = 243/334 (72%), Gaps = 6/334 (1%)
Frame = -1
Query: 1304 SEHCDRTKFWSILNDNCFRIRNIIDWERSHPDDIHDISQVYGIDVAWKYFFNSLNSAICD 1125
SE CDR FW+ L D+C I ++IDWE+SHPD++HD++ YG+DVAWKYF +LNSA+ +
Sbjct: 867 SESCDRNNFWNALVDSCLHIMDLIDWEQSHPDNVHDLTVAYGVDVAWKYFLRNLNSAVSE 926
Query: 1124 TGKTILPEHLVVTANCLSATGEFVALNAKGLAQQRKETSVSSPFSQACFLNPSDCFVKAA 945
TGK IL EHLV+ A+CL+ATGEFV LN KGLAQQRK V SPF QACF +P D FV+AA
Sbjct: 927 TGKKILLEHLVLAADCLTATGEFVPLNTKGLAQQRKCAGVISPFMQACFSHPGDSFVRAA 986
Query: 944 KTGQTDGLQGSLEALAWGQTPSVGTGCRFDIIYNGKGHEPAEPTDVYSLLSIHADSTKQN 765
KT +D LQGSLEALAWG+TPS GTG FDIIY+GKG+EPA PTDVY+LL H S +Q
Sbjct: 987 KTELSDDLQGSLEALAWGKTPSTGTGFSFDIIYSGKGYEPAAPTDVYALLGNHVTSNRQQ 1046
Query: 764 AKIKLPMKHKETPGKSFTEFLLK------EKGRKKMLTDTYSQYVVVDDIQRISRALQRI 603
K+ L + ET K+ L K ++ + + ++ +DI+++S+AL+++
Sbjct: 1047 VKVTLD-EDNETADKALARRLCKLDDLNTKRCKSQWSIANLRSFLSFNDIKKLSQALKQM 1105
Query: 602 LHEYPVDYQLTGEDKSAAMRALQFHPRSKEKIGIGAMEIKVGRHPKHVESRCFLLVRTDG 423
L +Y +D +L+ DKS M AL FHPR EKIG GAMEIK+G H ++ +SRCF+LVRTDG
Sbjct: 1106 LSKYAIDRELSEADKSIVMMALHFHPRRSEKIGKGAMEIKIGYHKEYEDSRCFMLVRTDG 1165
Query: 422 TVEDFSYHKCIHHALELITPQKAKAYHSRWLNGA 321
TVEDFSY KC+ HALELI PQKAK Y +WLNGA
Sbjct: 1166 TVEDFSYRKCLQHALELIAPQKAKTY--KWLNGA 1197
>ref|XP_009593317.1| PREDICTED: DNA-directed RNA polymerase IV subunit 1 isoform X1
[Nicotiana tomentosiformis]
Length = 1447
Score = 389 bits (998), Expect = e-105
Identities = 191/334 (57%), Positives = 243/334 (72%), Gaps = 6/334 (1%)
Frame = -1
Query: 1304 SEHCDRTKFWSILNDNCFRIRNIIDWERSHPDDIHDISQVYGIDVAWKYFFNSLNSAICD 1125
SE CDR FW+ L D+C I ++IDWE+SHPD++HD++ YG+DVAWKYF +LNSA+ +
Sbjct: 1103 SESCDRNNFWNALVDSCLHIMDLIDWEQSHPDNVHDLTVAYGVDVAWKYFLRNLNSAVSE 1162
Query: 1124 TGKTILPEHLVVTANCLSATGEFVALNAKGLAQQRKETSVSSPFSQACFLNPSDCFVKAA 945
TGK IL EHLV+ A+CL+ATGEFV LN KGLAQQRK V SPF QACF +P D FV+AA
Sbjct: 1163 TGKKILLEHLVLAADCLTATGEFVPLNTKGLAQQRKCAGVISPFMQACFSHPGDSFVRAA 1222
Query: 944 KTGQTDGLQGSLEALAWGQTPSVGTGCRFDIIYNGKGHEPAEPTDVYSLLSIHADSTKQN 765
KT +D LQGSLEALAWG+TPS GTG FDIIY+GKG+EPA PTDVY+LL H S +Q
Sbjct: 1223 KTELSDDLQGSLEALAWGKTPSTGTGFSFDIIYSGKGYEPAAPTDVYALLGNHVTSNRQQ 1282
Query: 764 AKIKLPMKHKETPGKSFTEFLLK------EKGRKKMLTDTYSQYVVVDDIQRISRALQRI 603
K+ L + ET K+ L K ++ + + ++ +DI+++S+AL+++
Sbjct: 1283 VKVTLD-EDNETADKALARRLCKLDDLNTKRCKSQWSIANLRSFLSFNDIKKLSQALKQM 1341
Query: 602 LHEYPVDYQLTGEDKSAAMRALQFHPRSKEKIGIGAMEIKVGRHPKHVESRCFLLVRTDG 423
L +Y +D +L+ DKS M AL FHPR EKIG GAMEIK+G H ++ +SRCF+LVRTDG
Sbjct: 1342 LSKYAIDRELSEADKSIVMMALHFHPRRSEKIGKGAMEIKIGYHKEYEDSRCFMLVRTDG 1401
Query: 422 TVEDFSYHKCIHHALELITPQKAKAYHSRWLNGA 321
TVEDFSY KC+ HALELI PQKAK Y +WLNGA
Sbjct: 1402 TVEDFSYRKCLQHALELIAPQKAKTY--KWLNGA 1433
>ref|XP_010053343.1| PREDICTED: DNA-directed RNA polymerase IV subunit 1 [Eucalyptus
grandis] gi|702324654|ref|XP_010053344.1| PREDICTED:
DNA-directed RNA polymerase IV subunit 1 [Eucalyptus
grandis] gi|702324662|ref|XP_010053345.1| PREDICTED:
DNA-directed RNA polymerase IV subunit 1 [Eucalyptus
grandis] gi|702324668|ref|XP_010053346.1| PREDICTED:
DNA-directed RNA polymerase IV subunit 1 [Eucalyptus
grandis] gi|702324674|ref|XP_010053347.1| PREDICTED:
DNA-directed RNA polymerase IV subunit 1 [Eucalyptus
grandis] gi|702324680|ref|XP_010053348.1| PREDICTED:
DNA-directed RNA polymerase IV subunit 1 [Eucalyptus
grandis] gi|702324687|ref|XP_010053349.1| PREDICTED:
DNA-directed RNA polymerase IV subunit 1 [Eucalyptus
grandis] gi|629112658|gb|KCW77618.1| hypothetical protein
EUGRSUZ_D01929 [Eucalyptus grandis]
Length = 1473
Score = 382 bits (982), Expect = e-103
Identities = 180/330 (54%), Positives = 235/330 (71%), Gaps = 5/330 (1%)
Frame = -1
Query: 1304 SEHCDRTKFWSILNDNCFRIRNIIDWERSHPDDIHDISQVYGIDVAWKYFFNSLNSAICD 1125
S H ++ K WS+L +NC I + IDW RSHPD+I + S GID WKYF NSL SA+ D
Sbjct: 1137 SAHSEKMKLWSVLMNNCVPIMDAIDWSRSHPDNIREFSLANGIDAGWKYFLNSLGSAVSD 1196
Query: 1124 TGKTILPEHLVVTANCLSATGEFVALNAKGLAQQRKETSVSSPFSQACFLNPSDCFVKAA 945
TGKT+LPEHLV+ ANCLS +GEFV LN KG+++QR+ +SV+SPF QACF NP CF+KAA
Sbjct: 1197 TGKTVLPEHLVLLANCLSTSGEFVGLNPKGMSRQREISSVASPFVQACFSNPGPCFIKAA 1256
Query: 944 KTGQTDGLQGSLEALAWGQTPSVGTGCRFDIIYNGKGHEPAEPTDVYSLLSIHADSTKQN 765
K G D LQGSL+ALAWG+ PS+GTG F+IIY+GKGHE A+P VY+LL ST+QN
Sbjct: 1257 KAGTVDSLQGSLDALAWGKVPSLGTGGLFEIIYSGKGHELAKPESVYNLLGNKVSSTQQN 1316
Query: 764 AKIKLPMKHKETPGKSFTEFLLKEKGRK-----KMLTDTYSQYVVVDDIQRISRALQRIL 600
K+++P P EF+ + K ++ + +++ +DIQ++S L++IL
Sbjct: 1317 IKLEVPNAGSHVPDTCGAEFVQADSVSKVLKKLEINKSLFRKFITFNDIQKLSLELKKIL 1376
Query: 599 HEYPVDYQLTGEDKSAAMRALQFHPRSKEKIGIGAMEIKVGRHPKHVESRCFLLVRTDGT 420
++YP+D+ L ++KS M AL+FHPR KEKIG GA IKVG HPKH +SRCF+LVR DG
Sbjct: 1377 YKYPIDHHLGEQEKSIVMMALKFHPRGKEKIGTGARNIKVGHHPKHQDSRCFMLVRDDGM 1436
Query: 419 VEDFSYHKCIHHALELITPQKAKAYHSRWL 330
EDFSYHKC+ ALE+I PQ+AK Y S+WL
Sbjct: 1437 AEDFSYHKCVLGALEIIAPQRAKTYQSKWL 1466
>ref|XP_006358859.1| PREDICTED: DNA-directed RNA polymerase IV subunit 1-like isoform X2
[Solanum tuberosum]
Length = 1233
Score = 370 bits (951), Expect = e-99
Identities = 190/335 (56%), Positives = 241/335 (71%), Gaps = 7/335 (2%)
Frame = -1
Query: 1304 SEHCDRTKFWSILNDNCFRIRNIIDWERSHPDDIHDISQVYGIDVAWKYFFNSLNSAICD 1125
SE CDR KFW+ L D+C +IR++IDWERS+PDD+HD++ YGIDVAW+YF L+SA+ +
Sbjct: 900 SESCDRIKFWNALVDSCLQIRDLIDWERSYPDDVHDLTVAYGIDVAWEYFLCKLHSAVSE 959
Query: 1124 TGKTILPEHLVVTANCLSATGEFVALNAKGLAQQRKETSVSSPFSQACFLNPSDCFVKAA 945
TGK ILPEHLV+ A+ L+ATGEFV L+AKGL QRK V SPF QACF NP D FV+AA
Sbjct: 960 TGKKILPEHLVLAADSLTATGEFVPLSAKGLTLQRKAAGVISPFMQACFSNPGDSFVRAA 1019
Query: 944 KTGQTDGLQGSLEALAWGQTPSVGTGCRFDIIYNGKGHEPAEPTDVYSLLSIHADSTKQN 765
K G +D LQGSLE+LAWG+TPS+GTG FDIIY+GKG+EPAEP DVY+LL H S
Sbjct: 1020 KMGLSDNLQGSLESLAWGKTPSIGTGSSFDIIYSGKGYEPAEPIDVYTLLQNHVTSGTPK 1079
Query: 764 AKIKLPMKHKETPGKSFTEFL-----LKEKGRKKMLTDT-YSQYVVVDDIQRISRALQRI 603
K+ L + GKS L L +K K + T ++ +DI+++S++L+++
Sbjct: 1080 VKVTLD-EDGGMDGKSLARRLDRLDDLNKKSCKSEWSITKLRSFISFNDIKKLSQSLKQM 1138
Query: 602 LHEYPVDYQLTGEDKSAAMRALQFHPRSKEKIGIGA-MEIKVGRHPKHVESRCFLLVRTD 426
L +Y +D +L DK AM ALQFHPR EKIG GA EIK+G H ++ +SRCF+LVR+D
Sbjct: 1139 LSKYAIDRELNEADKCIAMMALQFHPRRNEKIGKGAPQEIKIGYHKEYEDSRCFMLVRSD 1198
Query: 425 GTVEDFSYHKCIHHALELITPQKAKAYHSRWLNGA 321
G+VEDFSY KC+ HALELI PQKAK SRWLN A
Sbjct: 1199 GSVEDFSYRKCMQHALELIAPQKAKT--SRWLNRA 1231
>ref|XP_006358858.1| PREDICTED: DNA-directed RNA polymerase IV subunit 1-like isoform X1
[Solanum tuberosum]
Length = 1446
Score = 370 bits (951), Expect = e-99
Identities = 190/335 (56%), Positives = 241/335 (71%), Gaps = 7/335 (2%)
Frame = -1
Query: 1304 SEHCDRTKFWSILNDNCFRIRNIIDWERSHPDDIHDISQVYGIDVAWKYFFNSLNSAICD 1125
SE CDR KFW+ L D+C +IR++IDWERS+PDD+HD++ YGIDVAW+YF L+SA+ +
Sbjct: 1113 SESCDRIKFWNALVDSCLQIRDLIDWERSYPDDVHDLTVAYGIDVAWEYFLCKLHSAVSE 1172
Query: 1124 TGKTILPEHLVVTANCLSATGEFVALNAKGLAQQRKETSVSSPFSQACFLNPSDCFVKAA 945
TGK ILPEHLV+ A+ L+ATGEFV L+AKGL QRK V SPF QACF NP D FV+AA
Sbjct: 1173 TGKKILPEHLVLAADSLTATGEFVPLSAKGLTLQRKAAGVISPFMQACFSNPGDSFVRAA 1232
Query: 944 KTGQTDGLQGSLEALAWGQTPSVGTGCRFDIIYNGKGHEPAEPTDVYSLLSIHADSTKQN 765
K G +D LQGSLE+LAWG+TPS+GTG FDIIY+GKG+EPAEP DVY+LL H S
Sbjct: 1233 KMGLSDNLQGSLESLAWGKTPSIGTGSSFDIIYSGKGYEPAEPIDVYTLLQNHVTSGTPK 1292
Query: 764 AKIKLPMKHKETPGKSFTEFL-----LKEKGRKKMLTDT-YSQYVVVDDIQRISRALQRI 603
K+ L + GKS L L +K K + T ++ +DI+++S++L+++
Sbjct: 1293 VKVTLD-EDGGMDGKSLARRLDRLDDLNKKSCKSEWSITKLRSFISFNDIKKLSQSLKQM 1351
Query: 602 LHEYPVDYQLTGEDKSAAMRALQFHPRSKEKIGIGA-MEIKVGRHPKHVESRCFLLVRTD 426
L +Y +D +L DK AM ALQFHPR EKIG GA EIK+G H ++ +SRCF+LVR+D
Sbjct: 1352 LSKYAIDRELNEADKCIAMMALQFHPRRNEKIGKGAPQEIKIGYHKEYEDSRCFMLVRSD 1411
Query: 425 GTVEDFSYHKCIHHALELITPQKAKAYHSRWLNGA 321
G+VEDFSY KC+ HALELI PQKAK SRWLN A
Sbjct: 1412 GSVEDFSYRKCMQHALELIAPQKAKT--SRWLNRA 1444
>ref|XP_010661376.1| PREDICTED: DNA-directed RNA polymerase IV subunit 1 isoform X3 [Vitis
vinifera]
Length = 1354
Score = 370 bits (949), Expect = 2e-99
Identities = 177/333 (53%), Positives = 230/333 (69%), Gaps = 8/333 (2%)
Frame = -1
Query: 1304 SEHCDRTKFWSILNDNCFRIRNIIDWERSHPDDIHDISQVYGIDVAWKYFFNSLNSAICD 1125
S C + FW +L D C +I ++IDWERSHPD+IHDI VYGID WKYF NSL SAI D
Sbjct: 1017 SGDCGKKNFWGVLMDACLQIMDMIDWERSHPDNIHDIFVVYGIDAGWKYFLNSLKSAISD 1076
Query: 1124 TGKTILPEHLVVTANCLSATGEFVALNAKGLAQQRKETSVSSPFSQACFLNPSDCFVKAA 945
GKT+LPEHL++ A+CLSATGEFV LNAKG+A+Q++ TS+SSPF Q CF +P CF+KA
Sbjct: 1077 IGKTVLPEHLLLVASCLSATGEFVGLNAKGMARQKELTSISSPFMQGCFSSPGSCFIKAG 1136
Query: 944 KTGQTDGLQGSLEALAWGQTPSVGTGCRFDIIYNGKGHEPAEPTDVYSLLSIHADSTKQN 765
K D L GSL+ALAWG+ PSVG+G FDI+Y+ KGHE A P D+Y LL +QN
Sbjct: 1137 KRAVADNLHGSLDALAWGKIPSVGSGGHFDILYSAKGHELARPEDIYKLLGSQTSCHEQN 1196
Query: 764 AKIKLPMKHKETPGKSFTEFLLKE--------KGRKKMLTDTYSQYVVVDDIQRISRALQ 609
K+K+P+ +T K + + K +K+ ++ ++DIQ++SR L+
Sbjct: 1197 LKVKVPITCYQTTTKCGAQLVYANGDSASKGCKSLEKISKSVLRSFLSLNDIQKLSRRLK 1256
Query: 608 RILHEYPVDYQLTGEDKSAAMRALQFHPRSKEKIGIGAMEIKVGRHPKHVESRCFLLVRT 429
IL +YP+++QL+ DK+ M AL FHPR EKIG GA IKV H K+ +RCF LVRT
Sbjct: 1257 FILQKYPINHQLSEIDKTTLMMALYFHPRRDEKIGPGAQNIKVRYHSKYHNTRCFSLVRT 1316
Query: 428 DGTVEDFSYHKCIHHALELITPQKAKAYHSRWL 330
DGT EDFSYHKC+H ALE+I P++A++Y SRWL
Sbjct: 1317 DGTEEDFSYHKCVHGALEIIDPRRARSYQSRWL 1349
>ref|XP_010661369.1| PREDICTED: DNA-directed RNA polymerase IV subunit 1 isoform X2 [Vitis
vinifera]
Length = 1458
Score = 370 bits (949), Expect = 2e-99
Identities = 177/333 (53%), Positives = 230/333 (69%), Gaps = 8/333 (2%)
Frame = -1
Query: 1304 SEHCDRTKFWSILNDNCFRIRNIIDWERSHPDDIHDISQVYGIDVAWKYFFNSLNSAICD 1125
S C + FW +L D C +I ++IDWERSHPD+IHDI VYGID WKYF NSL SAI D
Sbjct: 1121 SGDCGKKNFWGVLMDACLQIMDMIDWERSHPDNIHDIFVVYGIDAGWKYFLNSLKSAISD 1180
Query: 1124 TGKTILPEHLVVTANCLSATGEFVALNAKGLAQQRKETSVSSPFSQACFLNPSDCFVKAA 945
GKT+LPEHL++ A+CLSATGEFV LNAKG+A+Q++ TS+SSPF Q CF +P CF+KA
Sbjct: 1181 IGKTVLPEHLLLVASCLSATGEFVGLNAKGMARQKELTSISSPFMQGCFSSPGSCFIKAG 1240
Query: 944 KTGQTDGLQGSLEALAWGQTPSVGTGCRFDIIYNGKGHEPAEPTDVYSLLSIHADSTKQN 765
K D L GSL+ALAWG+ PSVG+G FDI+Y+ KGHE A P D+Y LL +QN
Sbjct: 1241 KRAVADNLHGSLDALAWGKIPSVGSGGHFDILYSAKGHELARPEDIYKLLGSQTSCHEQN 1300
Query: 764 AKIKLPMKHKETPGKSFTEFLLKE--------KGRKKMLTDTYSQYVVVDDIQRISRALQ 609
K+K+P+ +T K + + K +K+ ++ ++DIQ++SR L+
Sbjct: 1301 LKVKVPITCYQTTTKCGAQLVYANGDSASKGCKSLEKISKSVLRSFLSLNDIQKLSRRLK 1360
Query: 608 RILHEYPVDYQLTGEDKSAAMRALQFHPRSKEKIGIGAMEIKVGRHPKHVESRCFLLVRT 429
IL +YP+++QL+ DK+ M AL FHPR EKIG GA IKV H K+ +RCF LVRT
Sbjct: 1361 FILQKYPINHQLSEIDKTTLMMALYFHPRRDEKIGPGAQNIKVRYHSKYHNTRCFSLVRT 1420
Query: 428 DGTVEDFSYHKCIHHALELITPQKAKAYHSRWL 330
DGT EDFSYHKC+H ALE+I P++A++Y SRWL
Sbjct: 1421 DGTEEDFSYHKCVHGALEIIDPRRARSYQSRWL 1453
>ref|XP_010661365.1| PREDICTED: DNA-directed RNA polymerase IV subunit 1 isoform X1 [Vitis
vinifera]
Length = 1460
Score = 370 bits (949), Expect = 2e-99
Identities = 177/333 (53%), Positives = 230/333 (69%), Gaps = 8/333 (2%)
Frame = -1
Query: 1304 SEHCDRTKFWSILNDNCFRIRNIIDWERSHPDDIHDISQVYGIDVAWKYFFNSLNSAICD 1125
S C + FW +L D C +I ++IDWERSHPD+IHDI VYGID WKYF NSL SAI D
Sbjct: 1123 SGDCGKKNFWGVLMDACLQIMDMIDWERSHPDNIHDIFVVYGIDAGWKYFLNSLKSAISD 1182
Query: 1124 TGKTILPEHLVVTANCLSATGEFVALNAKGLAQQRKETSVSSPFSQACFLNPSDCFVKAA 945
GKT+LPEHL++ A+CLSATGEFV LNAKG+A+Q++ TS+SSPF Q CF +P CF+KA
Sbjct: 1183 IGKTVLPEHLLLVASCLSATGEFVGLNAKGMARQKELTSISSPFMQGCFSSPGSCFIKAG 1242
Query: 944 KTGQTDGLQGSLEALAWGQTPSVGTGCRFDIIYNGKGHEPAEPTDVYSLLSIHADSTKQN 765
K D L GSL+ALAWG+ PSVG+G FDI+Y+ KGHE A P D+Y LL +QN
Sbjct: 1243 KRAVADNLHGSLDALAWGKIPSVGSGGHFDILYSAKGHELARPEDIYKLLGSQTSCHEQN 1302
Query: 764 AKIKLPMKHKETPGKSFTEFLLKE--------KGRKKMLTDTYSQYVVVDDIQRISRALQ 609
K+K+P+ +T K + + K +K+ ++ ++DIQ++SR L+
Sbjct: 1303 LKVKVPITCYQTTTKCGAQLVYANGDSASKGCKSLEKISKSVLRSFLSLNDIQKLSRRLK 1362
Query: 608 RILHEYPVDYQLTGEDKSAAMRALQFHPRSKEKIGIGAMEIKVGRHPKHVESRCFLLVRT 429
IL +YP+++QL+ DK+ M AL FHPR EKIG GA IKV H K+ +RCF LVRT
Sbjct: 1363 FILQKYPINHQLSEIDKTTLMMALYFHPRRDEKIGPGAQNIKVRYHSKYHNTRCFSLVRT 1422
Query: 428 DGTVEDFSYHKCIHHALELITPQKAKAYHSRWL 330
DGT EDFSYHKC+H ALE+I P++A++Y SRWL
Sbjct: 1423 DGTEEDFSYHKCVHGALEIIDPRRARSYQSRWL 1455
>emb|CBI34757.3| unnamed protein product [Vitis vinifera]
Length = 1359
Score = 370 bits (949), Expect = 2e-99
Identities = 177/333 (53%), Positives = 230/333 (69%), Gaps = 8/333 (2%)
Frame = -1
Query: 1304 SEHCDRTKFWSILNDNCFRIRNIIDWERSHPDDIHDISQVYGIDVAWKYFFNSLNSAICD 1125
S C + FW +L D C +I ++IDWERSHPD+IHDI VYGID WKYF NSL SAI D
Sbjct: 1012 SGDCGKKNFWGVLMDACLQIMDMIDWERSHPDNIHDIFVVYGIDAGWKYFLNSLKSAISD 1071
Query: 1124 TGKTILPEHLVVTANCLSATGEFVALNAKGLAQQRKETSVSSPFSQACFLNPSDCFVKAA 945
GKT+LPEHL++ A+CLSATGEFV LNAKG+A+Q++ TS+SSPF Q CF +P CF+KA
Sbjct: 1072 IGKTVLPEHLLLVASCLSATGEFVGLNAKGMARQKELTSISSPFMQGCFSSPGSCFIKAG 1131
Query: 944 KTGQTDGLQGSLEALAWGQTPSVGTGCRFDIIYNGKGHEPAEPTDVYSLLSIHADSTKQN 765
K D L GSL+ALAWG+ PSVG+G FDI+Y+ KGHE A P D+Y LL +QN
Sbjct: 1132 KRAVADNLHGSLDALAWGKIPSVGSGGHFDILYSAKGHELARPEDIYKLLGSQTSCHEQN 1191
Query: 764 AKIKLPMKHKETPGKSFTEFLLKE--------KGRKKMLTDTYSQYVVVDDIQRISRALQ 609
K+K+P+ +T K + + K +K+ ++ ++DIQ++SR L+
Sbjct: 1192 LKVKVPITCYQTTTKCGAQLVYANGDSASKGCKSLEKISKSVLRSFLSLNDIQKLSRRLK 1251
Query: 608 RILHEYPVDYQLTGEDKSAAMRALQFHPRSKEKIGIGAMEIKVGRHPKHVESRCFLLVRT 429
IL +YP+++QL+ DK+ M AL FHPR EKIG GA IKV H K+ +RCF LVRT
Sbjct: 1252 FILQKYPINHQLSEIDKTTLMMALYFHPRRDEKIGPGAQNIKVRYHSKYHNTRCFSLVRT 1311
Query: 428 DGTVEDFSYHKCIHHALELITPQKAKAYHSRWL 330
DGT EDFSYHKC+H ALE+I P++A++Y SRWL
Sbjct: 1312 DGTEEDFSYHKCVHGALEIIDPRRARSYQSRWL 1344
>gb|EPS74753.1| hypothetical protein M569_00001, partial [Genlisea aurea]
Length = 1380
Score = 369 bits (948), Expect = 2e-99
Identities = 192/317 (60%), Positives = 230/317 (72%), Gaps = 1/317 (0%)
Frame = -1
Query: 1304 SEHCDRTKFWSILNDNCFRIRNIIDWERSHPDDIHDISQVYGIDVAWKYFFNSLNSAICD 1125
SE+CD KFWS L D+C RIRN+IDWERS PDDI D S +GI AW+ F +L+S+I D
Sbjct: 1069 SEYCDPNKFWSNLVDSCLRIRNLIDWERSLPDDILDYSNAFGISSAWQSFVKNLHSSIID 1128
Query: 1124 TGKTILPEHLVVTANCLSATGEFVALNAKGLAQQRKETSVSSPFSQACFLNPSDCFVKAA 945
TGKTILPEHL+VTANCLSATGEFVALNAKGL QRKE + SPF+QA FLNPSD FVKAA
Sbjct: 1129 TGKTILPEHLIVTANCLSATGEFVALNAKGLVNQRKEIDIRSPFNQATFLNPSDTFVKAA 1188
Query: 944 KTGQTDGLQGSLEALAWGQTPSVGTGCRFDIIYNGKGHEPAEPTDVYSLLSIHADSTKQN 765
K QTD L GS+EAL+WGQTP +GTGC+FD+IY GKGHE A+ DVY LL H K N
Sbjct: 1189 KACQTDDLVGSVEALSWGQTPRIGTGCQFDLIYKGKGHETAKNEDVYGLLISHDGRAKSN 1248
Query: 764 AKIK-LPMKHKETPGKSFTEFLLKEKGRKKMLTDTYSQYVVVDDIQRISRALQRILHEYP 588
K + L MK T+ + K + L+ + V+ I++IS+ L+RIL EYP
Sbjct: 1249 VKERSLSMKSSNPLHGINTQ---QHKSWLERLSANMNHLSVL-GIKKISQKLKRILKEYP 1304
Query: 587 VDYQLTGEDKSAAMRALQFHPRSKEKIGIGAMEIKVGRHPKHVESRCFLLVRTDGTVEDF 408
+D QL+GEDKS A+ ALQFHPR EKIG G EIKVG HP+H + CF+L R+DGT EDF
Sbjct: 1305 MDRQLSGEDKSTALTALQFHPRWPEKIGSGIQEIKVGLHPEH-QQTCFILKRSDGTEEDF 1363
Query: 407 SYHKCIHHALELITPQK 357
SY KCI+HALEL+ P+K
Sbjct: 1364 SYRKCINHALELVAPRK 1380
>ref|XP_007040111.1| DNA-directed RNA polymerase II subunit RPB1-B, putative [Theobroma
cacao] gi|508777356|gb|EOY24612.1| DNA-directed RNA
polymerase II subunit RPB1-B, putative [Theobroma cacao]
Length = 1484
Score = 363 bits (931), Expect = 2e-97
Identities = 179/330 (54%), Positives = 232/330 (70%), Gaps = 11/330 (3%)
Frame = -1
Query: 1286 TKFWSILNDNCFRIRNIIDWERSHPDDIHDISQVYGIDVAWKYFFNSLNSAICDTGKTIL 1107
TK W +L ++C +I ++IDW RSHPD+I+ + YGID WK+F N+L SAI DTGKTIL
Sbjct: 1153 TKLWGVLMNDCLQIMDMIDWTRSHPDNINQLCLAYGIDAGWKFFLNNLKSAISDTGKTIL 1212
Query: 1106 PEHLVVTANCLSATGEFVALNAKGLAQQRKETSVSSPFSQACFLNPSDCFVKAAKTGQTD 927
EHL+V ANCLSATGEFV LN+KGL QQR+ VSSPF QACF NPS FVKAAKTG +D
Sbjct: 1213 NEHLLVVANCLSATGEFVGLNSKGLRQQREHAYVSSPFMQACFSNPSASFVKAAKTGASD 1272
Query: 926 GLQGSLEALAWGQTPSVGTGCRFDIIYNGKGHEPAEPTDVYSLLSIHADSTKQNAKIKLP 747
LQG+++ALAWG+ P +GTG +FDIIY+ K AEP DVY LL S KQ+ + ++P
Sbjct: 1273 DLQGTIDALAWGRIPHIGTGGQFDIIYSVKDQRLAEPVDVYKLLGSSISSQKQDVEFEVP 1332
Query: 746 MKHK-----------ETPGKSFTEFLLKEKGRKKMLTDTYSQYVVVDDIQRISRALQRIL 600
+ G S +E L K + +++ + + + + +DDIQR+SRAL+ IL
Sbjct: 1333 KALNFKSEKYGSLLIDALGDSASEELKKIETKRRSI---WRELLTLDDIQRLSRALRNIL 1389
Query: 599 HEYPVDYQLTGEDKSAAMRALQFHPRSKEKIGIGAMEIKVGRHPKHVESRCFLLVRTDGT 420
H+YP+D++L+ D + M AL FHPR EKIG GA EIKVG HP+H +RCF LVRTDGT
Sbjct: 1390 HKYPIDHRLSEADWNTLMMALYFHPRRDEKIGSGAQEIKVGYHPEHANARCFSLVRTDGT 1449
Query: 419 VEDFSYHKCIHHALELITPQKAKAYHSRWL 330
+ DFSYHKC+ ALE+I P +AK+Y S+WL
Sbjct: 1450 IVDFSYHKCVLGALEIIAPHRAKSYKSKWL 1479
>ref|XP_010325436.1| PREDICTED: DNA-directed RNA polymerase IV subunit 1 isoform X2
[Solanum lycopersicum]
Length = 1307
Score = 350 bits (899), Expect = 1e-93
Identities = 185/335 (55%), Positives = 233/335 (69%), Gaps = 7/335 (2%)
Frame = -1
Query: 1304 SEHCDRTKFWSILNDNCFRIRNIIDWERSHPDDIHDISQVYGIDVAWKYFFNSLNSAICD 1125
SE CDR KFW+ L D+C +IR++IDWERS+PDD+HD++ YGIDVAW+YF L+SA+ +
Sbjct: 974 SESCDRIKFWNALVDSCLQIRDLIDWERSYPDDVHDLTVAYGIDVAWEYFLCKLHSAVSE 1033
Query: 1124 TGKTILPEHLVVTANCLSATGEFVALNAKGLAQQRKETSVSSPFSQACFLNPSDCFVKAA 945
TGK ILPEHLV+ A+ L+ TGEFV L+AKGL QRK V SPF QACF NP D FV+AA
Sbjct: 1034 TGKKILPEHLVLAADSLTTTGEFVPLSAKGLTLQRKAAGVVSPFMQACFTNPGDSFVRAA 1093
Query: 944 KTGQTDGLQGSLEALAWGQTPSVGTGCRFDIIYNGKGHEPAEPTDVYSLLSIHADSTKQN 765
K G +D LQGSLE+LAWG+TPS+GTG FDI+Y+GKG+E AE +VY+LL N
Sbjct: 1094 KMGLSDDLQGSLESLAWGKTPSIGTGSSFDIMYSGKGYELAEQINVYTLLRNLVTVDTPN 1153
Query: 764 AKIKLPMKHKETPGKSFTEFL-----LKEKGRKKMLTDT-YSQYVVVDDIQRISRALQRI 603
K+ L K G S L L +K K L+ T Y +DI+++S++L+++
Sbjct: 1154 VKVTLG-KDGGMDGMSLVRRLDRLDDLDKKSCKSELSFTKLRSYFSFNDIKKLSQSLKQM 1212
Query: 602 LHEYPVDYQLTGEDKSAAMRALQFHPRSKEKIGIGA-MEIKVGRHPKHVESRCFLLVRTD 426
L +Y + +L DK AM ALQFHPR EKIG GA EIK+G H + SRCF++VR+D
Sbjct: 1213 LSKYDIGRELNEADKCLAMMALQFHPRRNEKIGKGAPKEIKIGYHQEFEGSRCFMVVRSD 1272
Query: 425 GTVEDFSYHKCIHHALELITPQKAKAYHSRWLNGA 321
TVEDFSY KC+ HALELI PQKAK SRWLNGA
Sbjct: 1273 DTVEDFSYRKCMQHALELIAPQKAKT--SRWLNGA 1305
>ref|XP_004245657.1| PREDICTED: DNA-directed RNA polymerase IV subunit 1 isoform X1
[Solanum lycopersicum] gi|723724576|ref|XP_010325435.1|
PREDICTED: DNA-directed RNA polymerase IV subunit 1
isoform X1 [Solanum lycopersicum]
Length = 1446
Score = 350 bits (899), Expect = 1e-93
Identities = 185/335 (55%), Positives = 233/335 (69%), Gaps = 7/335 (2%)
Frame = -1
Query: 1304 SEHCDRTKFWSILNDNCFRIRNIIDWERSHPDDIHDISQVYGIDVAWKYFFNSLNSAICD 1125
SE CDR KFW+ L D+C +IR++IDWERS+PDD+HD++ YGIDVAW+YF L+SA+ +
Sbjct: 1113 SESCDRIKFWNALVDSCLQIRDLIDWERSYPDDVHDLTVAYGIDVAWEYFLCKLHSAVSE 1172
Query: 1124 TGKTILPEHLVVTANCLSATGEFVALNAKGLAQQRKETSVSSPFSQACFLNPSDCFVKAA 945
TGK ILPEHLV+ A+ L+ TGEFV L+AKGL QRK V SPF QACF NP D FV+AA
Sbjct: 1173 TGKKILPEHLVLAADSLTTTGEFVPLSAKGLTLQRKAAGVVSPFMQACFTNPGDSFVRAA 1232
Query: 944 KTGQTDGLQGSLEALAWGQTPSVGTGCRFDIIYNGKGHEPAEPTDVYSLLSIHADSTKQN 765
K G +D LQGSLE+LAWG+TPS+GTG FDI+Y+GKG+E AE +VY+LL N
Sbjct: 1233 KMGLSDDLQGSLESLAWGKTPSIGTGSSFDIMYSGKGYELAEQINVYTLLRNLVTVDTPN 1292
Query: 764 AKIKLPMKHKETPGKSFTEFL-----LKEKGRKKMLTDT-YSQYVVVDDIQRISRALQRI 603
K+ L K G S L L +K K L+ T Y +DI+++S++L+++
Sbjct: 1293 VKVTLG-KDGGMDGMSLVRRLDRLDDLDKKSCKSELSFTKLRSYFSFNDIKKLSQSLKQM 1351
Query: 602 LHEYPVDYQLTGEDKSAAMRALQFHPRSKEKIGIGA-MEIKVGRHPKHVESRCFLLVRTD 426
L +Y + +L DK AM ALQFHPR EKIG GA EIK+G H + SRCF++VR+D
Sbjct: 1352 LSKYDIGRELNEADKCLAMMALQFHPRRNEKIGKGAPKEIKIGYHQEFEGSRCFMVVRSD 1411
Query: 425 GTVEDFSYHKCIHHALELITPQKAKAYHSRWLNGA 321
TVEDFSY KC+ HALELI PQKAK SRWLNGA
Sbjct: 1412 DTVEDFSYRKCMQHALELIAPQKAKT--SRWLNGA 1444