BLASTX nr result
ID: Forsythia22_contig00031957
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Forsythia22_contig00031957
(1495 letters)
Database: ./nr
69,698,275 sequences; 24,982,196,650 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
emb|CAN65540.1| hypothetical protein VITISV_029946 [Vitis vinifera] 116 5e-23
ref|XP_010526684.1| PREDICTED: retrovirus-related Pol polyprotei... 109 5e-21
ref|XP_010526683.1| PREDICTED: retrovirus-related Pol polyprotei... 109 5e-21
ref|XP_010526682.1| PREDICTED: retrovirus-related Pol polyprotei... 109 5e-21
ref|XP_010526681.1| PREDICTED: retrovirus-related Pol polyprotei... 109 5e-21
ref|XP_010526680.1| PREDICTED: retrovirus-related Pol polyprotei... 109 5e-21
ref|XP_010526678.1| PREDICTED: retrovirus-related Pol polyprotei... 109 5e-21
ref|XP_010451244.1| PREDICTED: uncharacterized protein LOC104733... 108 8e-21
emb|CAA72989.1| unnamed protein product [Brassica oleracea var. ... 108 8e-21
emb|CAN76546.1| hypothetical protein VITISV_010420 [Vitis vinifera] 107 2e-20
dbj|BAB10503.1| retroelement pol polyprotein-like [Arabidopsis t... 106 5e-20
ref|XP_010501880.1| PREDICTED: uncharacterized protein LOC104779... 105 7e-20
gb|AAD25646.1| putative retroelement pol polyprotein [Arabidopsi... 105 9e-20
ref|XP_009597445.1| PREDICTED: uncharacterized protein LOC104093... 105 1e-19
gb|AAB61111.1| Strong similarity to Zea mays retrotransposon Hop... 105 1e-19
ref|XP_009121252.1| PREDICTED: uncharacterized protein LOC103846... 104 2e-19
ref|XP_009788994.1| PREDICTED: uncharacterized protein LOC104236... 103 4e-19
gb|AAD26943.1| putative retroelement pol polyprotein [Arabidopsi... 103 5e-19
gb|AAD41979.1| putative retroelement pol polyprotein [Arabidopsi... 102 1e-18
ref|XP_010532348.1| PREDICTED: uncharacterized protein LOC104808... 101 1e-18
>emb|CAN65540.1| hypothetical protein VITISV_029946 [Vitis vinifera]
Length = 1240
Score = 116 bits (290), Expect = 5e-23
Identities = 55/100 (55%), Positives = 74/100 (74%)
Frame = +2
Query: 5 MLFQSGNPLGYSGL*VLTATHLINILPSPLLKLKTPFEILHSKAPNYKDLRAFGCLCYAS 184
+ FQS P+GY G VLT+ +LIN +PSPLL KTPFE+L+ K+P+Y L++FGCLCY+S
Sbjct: 543 LYFQSNIPIGYWGDCVLTSVYLINQIPSPLLNNKTPFELLYHKSPSYSHLKSFGCLCYSS 602
Query: 185 ILLSTRHKFSPRSKACIFLGYPHGMKAYNNPQL*DPRPLS 304
L STRHKFSPR+ C+FLGYP G K + + ++ P+S
Sbjct: 603 TLPSTRHKFSPRALPCVFLGYPFGYKDFFSEKVLPVVPVS 642
>ref|XP_010526684.1| PREDICTED: retrovirus-related Pol polyprotein from transposon TNT
1-94 isoform X6 [Tarenaya hassleriana]
Length = 789
Score = 109 bits (273), Expect = 5e-21
Identities = 50/88 (56%), Positives = 64/88 (72%)
Frame = +2
Query: 5 MLFQSGNPLGYSGL*VLTATHLINILPSPLLKLKTPFEILHSKAPNYKDLRAFGCLCYAS 184
+LFQS PL + G +LT+ +LIN PSPLL+ KTPFE+L +P+Y LR FGCLCY S
Sbjct: 263 LLFQSNVPLAFWGDCILTSVYLINRTPSPLLQNKTPFELLTGCSPSYSHLRVFGCLCYVS 322
Query: 185 ILLSTRHKFSPRSKACIFLGYPHGMKAY 268
L RHKF+PR+ + +FLGYPHG+K Y
Sbjct: 323 TLTKDRHKFNPRAMSAVFLGYPHGVKGY 350
>ref|XP_010526683.1| PREDICTED: retrovirus-related Pol polyprotein from transposon TNT
1-94 isoform X5 [Tarenaya hassleriana]
Length = 886
Score = 109 bits (273), Expect = 5e-21
Identities = 50/88 (56%), Positives = 64/88 (72%)
Frame = +2
Query: 5 MLFQSGNPLGYSGL*VLTATHLINILPSPLLKLKTPFEILHSKAPNYKDLRAFGCLCYAS 184
+LFQS PL + G +LT+ +LIN PSPLL+ KTPFE+L +P+Y LR FGCLCY S
Sbjct: 360 LLFQSNVPLAFWGDCILTSVYLINRTPSPLLQNKTPFELLTGCSPSYSHLRVFGCLCYVS 419
Query: 185 ILLSTRHKFSPRSKACIFLGYPHGMKAY 268
L RHKF+PR+ + +FLGYPHG+K Y
Sbjct: 420 TLTKDRHKFNPRAMSAVFLGYPHGVKGY 447
>ref|XP_010526682.1| PREDICTED: retrovirus-related Pol polyprotein from transposon TNT
1-94 isoform X4 [Tarenaya hassleriana]
Length = 940
Score = 109 bits (273), Expect = 5e-21
Identities = 50/88 (56%), Positives = 64/88 (72%)
Frame = +2
Query: 5 MLFQSGNPLGYSGL*VLTATHLINILPSPLLKLKTPFEILHSKAPNYKDLRAFGCLCYAS 184
+LFQS PL + G +LT+ +LIN PSPLL+ KTPFE+L +P+Y LR FGCLCY S
Sbjct: 414 LLFQSNVPLAFWGDCILTSVYLINRTPSPLLQNKTPFELLTGCSPSYSHLRVFGCLCYVS 473
Query: 185 ILLSTRHKFSPRSKACIFLGYPHGMKAY 268
L RHKF+PR+ + +FLGYPHG+K Y
Sbjct: 474 TLTKDRHKFNPRAMSAVFLGYPHGVKGY 501
>ref|XP_010526681.1| PREDICTED: retrovirus-related Pol polyprotein from transposon TNT
1-94 isoform X3 [Tarenaya hassleriana]
Length = 1238
Score = 109 bits (273), Expect = 5e-21
Identities = 50/88 (56%), Positives = 64/88 (72%)
Frame = +2
Query: 5 MLFQSGNPLGYSGL*VLTATHLINILPSPLLKLKTPFEILHSKAPNYKDLRAFGCLCYAS 184
+LFQS PL + G +LT+ +LIN PSPLL+ KTPFE+L +P+Y LR FGCLCY S
Sbjct: 749 LLFQSNVPLAFWGDCILTSVYLINRTPSPLLQNKTPFELLTGCSPSYSHLRVFGCLCYVS 808
Query: 185 ILLSTRHKFSPRSKACIFLGYPHGMKAY 268
L RHKF+PR+ + +FLGYPHG+K Y
Sbjct: 809 TLTKDRHKFNPRAMSAVFLGYPHGVKGY 836
>ref|XP_010526680.1| PREDICTED: retrovirus-related Pol polyprotein from transposon TNT
1-94 isoform X2 [Tarenaya hassleriana]
Length = 1244
Score = 109 bits (273), Expect = 5e-21
Identities = 50/88 (56%), Positives = 64/88 (72%)
Frame = +2
Query: 5 MLFQSGNPLGYSGL*VLTATHLINILPSPLLKLKTPFEILHSKAPNYKDLRAFGCLCYAS 184
+LFQS PL + G +LT+ +LIN PSPLL+ KTPFE+L +P+Y LR FGCLCY S
Sbjct: 718 LLFQSNVPLAFWGDCILTSVYLINRTPSPLLQNKTPFELLTGCSPSYSHLRVFGCLCYVS 777
Query: 185 ILLSTRHKFSPRSKACIFLGYPHGMKAY 268
L RHKF+PR+ + +FLGYPHG+K Y
Sbjct: 778 TLTKDRHKFNPRAMSAVFLGYPHGVKGY 805
>ref|XP_010526678.1| PREDICTED: retrovirus-related Pol polyprotein from transposon TNT
1-94 isoform X1 [Tarenaya hassleriana]
Length = 1275
Score = 109 bits (273), Expect = 5e-21
Identities = 50/88 (56%), Positives = 64/88 (72%)
Frame = +2
Query: 5 MLFQSGNPLGYSGL*VLTATHLINILPSPLLKLKTPFEILHSKAPNYKDLRAFGCLCYAS 184
+LFQS PL + G +LT+ +LIN PSPLL+ KTPFE+L +P+Y LR FGCLCY S
Sbjct: 749 LLFQSNVPLAFWGDCILTSVYLINRTPSPLLQNKTPFELLTGCSPSYSHLRVFGCLCYVS 808
Query: 185 ILLSTRHKFSPRSKACIFLGYPHGMKAY 268
L RHKF+PR+ + +FLGYPHG+K Y
Sbjct: 809 TLTKDRHKFNPRAMSAVFLGYPHGVKGY 836
>ref|XP_010451244.1| PREDICTED: uncharacterized protein LOC104733360 [Camelina sativa]
Length = 1126
Score = 108 bits (271), Expect = 8e-21
Identities = 53/86 (61%), Positives = 60/86 (69%)
Frame = +2
Query: 11 FQSGNPLGYSGL*VLTATHLINILPSPLLKLKTPFEILHSKAPNYKDLRAFGCLCYASIL 190
FQS PL Y G +LTA LIN PSPLL KTP+E+L +K P+Y +R FGCLCYAS
Sbjct: 558 FQSQVPLSYWGDCILTAVFLINRTPSPLLSNKTPYELLTNKPPDYTRIRTFGCLCYASTS 617
Query: 191 LSTRHKFSPRSKACIFLGYPHGMKAY 268
RHKF PRS+ACIFLGYP G K Y
Sbjct: 618 PKQRHKFQPRSRACIFLGYPAGFKGY 643
>emb|CAA72989.1| unnamed protein product [Brassica oleracea var. viridis]
Length = 1131
Score = 108 bits (271), Expect = 8e-21
Identities = 53/88 (60%), Positives = 60/88 (68%)
Frame = +2
Query: 5 MLFQSGNPLGYSGL*VLTATHLINILPSPLLKLKTPFEILHSKAPNYKDLRAFGCLCYAS 184
++FQS PL Y G VLTA LIN PSPLL K+P+E+L KAP Y LR FGCLCY S
Sbjct: 689 LMFQSQVPLQYWGDCVLTAAFLINRTPSPLLANKSPYEVLMGKAPQYDQLRTFGCLCYGS 748
Query: 185 ILLSTRHKFSPRSKACIFLGYPHGMKAY 268
RHKF PRS+AC+FLGYP G K Y
Sbjct: 749 TSPKQRHKFMPRSRACVFLGYPSGYKGY 776
>emb|CAN76546.1| hypothetical protein VITISV_010420 [Vitis vinifera]
Length = 1288
Score = 107 bits (268), Expect = 2e-20
Identities = 52/88 (59%), Positives = 60/88 (68%)
Frame = +2
Query: 5 MLFQSGNPLGYSGL*VLTATHLINILPSPLLKLKTPFEILHSKAPNYKDLRAFGCLCYAS 184
+LF S P+ Y +LTA +LIN PSP L KTPFEILH K P+Y LR FGCLCY S
Sbjct: 585 LLFXSSLPVCYWSDCILTAVYLINRTPSPFLNNKTPFEILHDKLPDYSHLRVFGCLCYVS 644
Query: 185 ILLSTRHKFSPRSKACIFLGYPHGMKAY 268
L + R KFSPR+KA +FLGYP G K Y
Sbjct: 645 TLKANRTKFSPRAKAAVFLGYPFGFKGY 672
>dbj|BAB10503.1| retroelement pol polyprotein-like [Arabidopsis thaliana]
Length = 1475
Score = 106 bits (264), Expect = 5e-20
Identities = 47/88 (53%), Positives = 63/88 (71%)
Frame = +2
Query: 5 MLFQSGNPLGYSGL*VLTATHLINILPSPLLKLKTPFEILHSKAPNYKDLRAFGCLCYAS 184
++F++ PL + G +L+A LIN LP+PLL K+PFE+LH K P+Y L+ FGCLCY S
Sbjct: 757 LMFEANMPLEFWGDCILSAVFLINRLPTPLLSNKSPFELLHLKVPDYTSLKVFGCLCYES 816
Query: 185 ILLSTRHKFSPRSKACIFLGYPHGMKAY 268
RHKF+PR++AC+FLGYP G K Y
Sbjct: 817 TSPQQRHKFAPRARACVFLGYPSGYKGY 844
>ref|XP_010501880.1| PREDICTED: uncharacterized protein LOC104779202 [Camelina sativa]
Length = 215
Score = 105 bits (263), Expect = 7e-20
Identities = 50/89 (56%), Positives = 59/89 (66%)
Frame = +2
Query: 2 GMLFQSGNPLGYSGL*VLTATHLINILPSPLLKLKTPFEILHSKAPNYKDLRAFGCLCYA 181
G++FQS PL Y G +LT HLIN LP P+L K+PFE L K P+Y L+ FGCLCY
Sbjct: 32 GLVFQSHIPLPYWGDCILTVVHLINRLPVPILDDKSPFEFLTKKQPDYSQLKTFGCLCYV 91
Query: 182 SILLSTRHKFSPRSKACIFLGYPHGMKAY 268
S HKF PR+KAC+FLGYP G K Y
Sbjct: 92 STSPKNIHKFDPRAKACVFLGYPSGYKRY 120
>gb|AAD25646.1| putative retroelement pol polyprotein [Arabidopsis thaliana]
Length = 1461
Score = 105 bits (262), Expect = 9e-20
Identities = 51/88 (57%), Positives = 59/88 (67%)
Frame = +2
Query: 5 MLFQSGNPLGYSGL*VLTATHLINILPSPLLKLKTPFEILHSKAPNYKDLRAFGCLCYAS 184
++FQS L Y G VLTA LIN PS LL KTPFE+L K P+Y L+ FGCLCY+S
Sbjct: 740 LMFQSNMSLPYWGDCVLTAVFLINRTPSALLSNKTPFEVLTGKLPDYSQLKTFGCLCYSS 799
Query: 185 ILLSTRHKFSPRSKACIFLGYPHGMKAY 268
RHKF PRS+AC+FLGYP G K Y
Sbjct: 800 TSSKQRHKFLPRSRACVFLGYPFGFKGY 827
>ref|XP_009597445.1| PREDICTED: uncharacterized protein LOC104093411 [Nicotiana
tomentosiformis]
Length = 627
Score = 105 bits (261), Expect = 1e-19
Identities = 63/168 (37%), Positives = 85/168 (50%), Gaps = 4/168 (2%)
Frame = +2
Query: 2 GMLFQSGNPLGYSGL*VLTATHLINILPSPLLKLKTPFEILHSKAPNYKDLRAFGCLCYA 181
G+ FQS PL Y G VLTAT+L N PS +LK KTP+E+L + P Y L+ FGCLC+A
Sbjct: 65 GLFFQSKLPLQYWGECVLTATYLFNRFPSRVLKGKTPYEMLFGRPPTYDSLKTFGCLCFA 124
Query: 182 SILLSTRHKFSPRSKACIFLGYPHGMKAYNNPQL*DPRPLSKR--LDCVSLHDSILSPLP 355
S L +R KF PR+K C+FLGYP + Y ++ R R L S LS P
Sbjct: 125 STLAHSRGKFEPRAKTCMFLGYPQNQRGYKQLEMSSKRVFVSRDYLRADSAQGIFLSADP 184
Query: 356 SRSLAGVRGQDETLSTDD--SSRAFSLPTSSYRMDWEDWRAKSLFITT 493
S L D D S F + + W+ + S+ +++
Sbjct: 185 SFDLLAFCDADWAACRDSRRSMSGFFITLGGAPISWKSKKQVSISLSS 232
>gb|AAB61111.1| Strong similarity to Zea mays retrotransposon Hopscotch polyprotein
(gb|U12626) [Arabidopsis thaliana]
Length = 1315
Score = 105 bits (261), Expect = 1e-19
Identities = 48/88 (54%), Positives = 60/88 (68%)
Frame = +2
Query: 5 MLFQSGNPLGYSGL*VLTATHLINILPSPLLKLKTPFEILHSKAPNYKDLRAFGCLCYAS 184
+ FQS P+ Y G +LTA +LIN LP+P+L+ K PFE+L P Y ++ FGCLCYAS
Sbjct: 578 LFFQSHIPISYWGDCILTAVYLINRLPAPILEDKCPFEVLTKTVPTYDHIKVFGCLCYAS 637
Query: 185 ILLSTRHKFSPRSKACIFLGYPHGMKAY 268
RHKFSPR+KAC F+GYP G K Y
Sbjct: 638 TSPKDRHKFSPRAKACAFIGYPSGFKGY 665
>ref|XP_009121252.1| PREDICTED: uncharacterized protein LOC103846085 [Brassica rapa]
Length = 860
Score = 104 bits (260), Expect = 2e-19
Identities = 48/88 (54%), Positives = 61/88 (69%)
Frame = +2
Query: 5 MLFQSGNPLGYSGL*VLTATHLINILPSPLLKLKTPFEILHSKAPNYKDLRAFGCLCYAS 184
++FQS L Y VLTA LIN LPSPLL+ K+P+++LH K P+Y +++ FGCLCY S
Sbjct: 666 LMFQSKLSLEYWSDCVLTAVFLINRLPSPLLQDKSPYQLLHKKKPDYSEIKVFGCLCYVS 725
Query: 185 ILLSTRHKFSPRSKACIFLGYPHGMKAY 268
RHKF PRS+ C+FLGYP G K Y
Sbjct: 726 TSSKNRHKFQPRSRPCLFLGYPAGFKGY 753
>ref|XP_009788994.1| PREDICTED: uncharacterized protein LOC104236708 [Nicotiana
sylvestris]
Length = 871
Score = 103 bits (257), Expect = 4e-19
Identities = 50/88 (56%), Positives = 62/88 (70%)
Frame = +2
Query: 5 MLFQSGNPLGYSGL*VLTATHLINILPSPLLKLKTPFEILHSKAPNYKDLRAFGCLCYAS 184
+LFQS P+ Y G +LTAT LIN P+ LL KTP++++ KAPNY LR+FGCLC+AS
Sbjct: 568 LLFQSQAPICYWGECLLTATFLINRFPTKLLNYKTPYKVMFHKAPNYTFLRSFGCLCFAS 627
Query: 185 ILLSTRHKFSPRSKACIFLGYPHGMKAY 268
L R K PR+ ACIFLGYP+G K Y
Sbjct: 628 TLSHHRGKLDPRADACIFLGYPYGKKGY 655
>gb|AAD26943.1| putative retroelement pol polyprotein [Arabidopsis thaliana]
Length = 1454
Score = 103 bits (256), Expect = 5e-19
Identities = 52/88 (59%), Positives = 59/88 (67%)
Frame = +2
Query: 5 MLFQSGNPLGYSGL*VLTATHLINILPSPLLKLKTPFEILHSKAPNYKDLRAFGCLCYAS 184
++FQS PL G VLTA LIN PS LL KTP+EIL AP Y+ LR FGCLCY+S
Sbjct: 729 LMFQSQVPLSLWGDCVLTAVFLINRTPSQLLMNKTPYEILTGTAPVYEQLRTFGCLCYSS 788
Query: 185 ILLSTRHKFSPRSKACIFLGYPHGMKAY 268
RHKF PRS+AC+FLGYP G K Y
Sbjct: 789 TSPKQRHKFQPRSRACLFLGYPSGYKGY 816
>gb|AAD41979.1| putative retroelement pol polyprotein [Arabidopsis thaliana]
Length = 1264
Score = 102 bits (253), Expect = 1e-18
Identities = 53/88 (60%), Positives = 57/88 (64%)
Frame = +2
Query: 5 MLFQSGNPLGYSGL*VLTATHLINILPSPLLKLKTPFEILHSKAPNYKDLRAFGCLCYAS 184
++FQS PL G VLTA LIN PS LL KTP+EIL AP Y LR FGCLCY+S
Sbjct: 588 LMFQSQVPLFLWGECVLTAVFLINRTPSQLLSNKTPYEILSGTAPQYGQLRTFGCLCYSS 647
Query: 185 ILLSTRHKFSPRSKACIFLGYPHGMKAY 268
RHKF PRSKACIFLGY G K Y
Sbjct: 648 TSPKQRHKFQPRSKACIFLGYSSGYKGY 675
>ref|XP_010532348.1| PREDICTED: uncharacterized protein LOC104808371 [Tarenaya
hassleriana]
Length = 1788
Score = 101 bits (252), Expect = 1e-18
Identities = 48/88 (54%), Positives = 62/88 (70%)
Frame = +2
Query: 5 MLFQSGNPLGYSGL*VLTATHLINILPSPLLKLKTPFEILHSKAPNYKDLRAFGCLCYAS 184
++FQS P Y V A +LIN LPSP+L+ KTP+E+L+ K P Y+ LRAFGCLCY+S
Sbjct: 496 LMFQSNVPAEYWSDCVRCAIYLINRLPSPVLQEKTPYEVLYDKPPAYEHLRAFGCLCYSS 555
Query: 185 ILLSTRHKFSPRSKACIFLGYPHGMKAY 268
L RHKFS R++A +F+GYP G K Y
Sbjct: 556 TNLKDRHKFSVRARAAVFIGYPQGYKGY 583