BLASTX nr result
ID: Forsythia22_contig00031589
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Forsythia22_contig00031589
(868 letters)
Database: ./nr
69,698,275 sequences; 24,982,196,650 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|YP_009110592.1| RNA polymerase beta'' chain (chloroplast) [H... 91 8e-16
ref|YP_003359349.2| RNA polymerase beta II subunit (chloroplast)... 91 8e-16
ref|YP_004563771.1| RNA polymerase beta'' chain [Olea europaea s... 91 8e-16
ref|YP_004563994.1| RNA polymerase beta'' chain [Olea woodiana s... 91 8e-16
emb|CBR30396.1| RNA polymerase beta'' chain [Olea europaea subsp... 91 8e-16
ref|YP_004376411.1| RNA polymerase beta'' chain [Olea europaea s... 91 8e-16
gb|ADD72079.1| RNA polymerase beta' subunit [Olea europaea] gi|3... 91 8e-16
gb|ADO13864.1| RNA polymerase beta subunit, partial (chloroplast... 89 5e-15
gb|AII18682.1| RNA polymerase beta' subunit, partial (chloroplas... 86 3e-14
gb|AII18681.1| RNA polymerase beta' subunit, partial (chloroplas... 86 3e-14
gb|AII18680.1| RNA polymerase beta' subunit, partial (chloroplas... 86 3e-14
gb|AII18679.1| RNA polymerase beta' subunit, partial (chloroplas... 86 3e-14
gb|AII18676.1| RNA polymerase beta' subunit, partial (chloroplas... 86 3e-14
gb|AII18675.1| RNA polymerase beta' subunit, partial (chloroplas... 86 3e-14
gb|AII18674.1| RNA polymerase beta' subunit, partial (chloroplas... 86 3e-14
gb|AII18673.1| RNA polymerase beta' subunit, partial (chloroplas... 86 3e-14
gb|AII18672.1| RNA polymerase beta' subunit, partial (chloroplas... 86 3e-14
gb|AII18668.1| RNA polymerase beta' subunit, partial (chloroplas... 86 3e-14
gb|AII18667.1| RNA polymerase beta' subunit, partial (chloroplas... 86 3e-14
gb|AII18666.1| RNA polymerase beta' subunit, partial (chloroplas... 86 3e-14
>ref|YP_009110592.1| RNA polymerase beta'' chain (chloroplast) [Hesperelaea palmeri]
gi|725798276|emb|CED79752.1| RNA polymerase beta'' chain
(chloroplast) [Hesperelaea palmeri]
Length = 1394
Score = 91.3 bits (225), Expect = 8e-16
Identities = 43/48 (89%), Positives = 44/48 (91%)
Frame = -1
Query: 661 EDRISDYSDLNRIICTGHCNLIYPTILHQNSNLFSKRRRNRLIIPLQS 518
EDRISDYSDLNRI C G CNLIYPTILHQNS+LFSKRRRNR IIPLQS
Sbjct: 540 EDRISDYSDLNRIRCNGRCNLIYPTILHQNSDLFSKRRRNRFIIPLQS 587
>ref|YP_003359349.2| RNA polymerase beta II subunit (chloroplast) [Olea europaea]
gi|363413081|gb|ADA69916.2| RNA polymerase beta II
subunit (chloroplast) [Olea europaea]
Length = 1390
Score = 91.3 bits (225), Expect = 8e-16
Identities = 43/48 (89%), Positives = 44/48 (91%)
Frame = -1
Query: 661 EDRISDYSDLNRIICTGHCNLIYPTILHQNSNLFSKRRRNRLIIPLQS 518
EDRISDYSDLNRI C G CNLIYPTILHQNS+LFSKRRRNR IIPLQS
Sbjct: 536 EDRISDYSDLNRIRCNGRCNLIYPTILHQNSDLFSKRRRNRFIIPLQS 583
>ref|YP_004563771.1| RNA polymerase beta'' chain [Olea europaea subsp. cuspidata]
gi|334084940|emb|CBJ04288.1| RNA polymerase beta'' chain
[Olea europaea subsp. cuspidata]
Length = 1394
Score = 91.3 bits (225), Expect = 8e-16
Identities = 43/48 (89%), Positives = 44/48 (91%)
Frame = -1
Query: 661 EDRISDYSDLNRIICTGHCNLIYPTILHQNSNLFSKRRRNRLIIPLQS 518
EDRISDYSDLNRI C G CNLIYPTILHQNS+LFSKRRRNR IIPLQS
Sbjct: 540 EDRISDYSDLNRIRCNGRCNLIYPTILHQNSDLFSKRRRNRFIIPLQS 587
>ref|YP_004563994.1| RNA polymerase beta'' chain [Olea woodiana subsp. woodiana]
gi|334084649|emb|CBS29340.1| RNA polymerase beta'' chain
[Olea woodiana subsp. woodiana]
Length = 1394
Score = 91.3 bits (225), Expect = 8e-16
Identities = 43/48 (89%), Positives = 44/48 (91%)
Frame = -1
Query: 661 EDRISDYSDLNRIICTGHCNLIYPTILHQNSNLFSKRRRNRLIIPLQS 518
EDRISDYSDLNRI C G CNLIYPTILHQNS+LFSKRRRNR IIPLQS
Sbjct: 540 EDRISDYSDLNRIRCNGRCNLIYPTILHQNSDLFSKRRRNRFIIPLQS 587
>emb|CBR30396.1| RNA polymerase beta'' chain [Olea europaea subsp. europaea]
Length = 1394
Score = 91.3 bits (225), Expect = 8e-16
Identities = 43/48 (89%), Positives = 44/48 (91%)
Frame = -1
Query: 661 EDRISDYSDLNRIICTGHCNLIYPTILHQNSNLFSKRRRNRLIIPLQS 518
EDRISDYSDLNRI C G CNLIYPTILHQNS+LFSKRRRNR IIPLQS
Sbjct: 540 EDRISDYSDLNRIRCNGRCNLIYPTILHQNSDLFSKRRRNRFIIPLQS 587
>ref|YP_004376411.1| RNA polymerase beta'' chain [Olea europaea subsp. europaea]
gi|334701878|ref|YP_004564487.1| RNA polymerase beta''
chain [Olea europaea subsp. maroccana]
gi|328795423|emb|CBR30304.1| RNA polymerase beta'' chain
[Olea europaea subsp. europaea]
gi|334084391|emb|CBR23819.1| RNA polymerase beta'' chain
[Olea europaea subsp. cuspidata]
gi|334084854|emb|CBS29226.1| RNA polymerase beta'' chain
[Olea europaea subsp. maroccana]
gi|334085026|emb|CBR23728.1| RNA polymerase beta'' chain
[Olea europaea subsp. cuspidata]
Length = 1394
Score = 91.3 bits (225), Expect = 8e-16
Identities = 43/48 (89%), Positives = 44/48 (91%)
Frame = -1
Query: 661 EDRISDYSDLNRIICTGHCNLIYPTILHQNSNLFSKRRRNRLIIPLQS 518
EDRISDYSDLNRI C G CNLIYPTILHQNS+LFSKRRRNR IIPLQS
Sbjct: 540 EDRISDYSDLNRIRCNGRCNLIYPTILHQNSDLFSKRRRNRFIIPLQS 587
>gb|ADD72079.1| RNA polymerase beta' subunit [Olea europaea]
gi|334084477|emb|CBR24610.1| RNA polymerase beta'' chain
[Olea europaea subsp. europaea]
gi|510934394|emb|CCQ09092.1| RNA polymerase beta'' chain
(chloroplast) [Olea europaea subsp. europaea]
Length = 1394
Score = 91.3 bits (225), Expect = 8e-16
Identities = 43/48 (89%), Positives = 44/48 (91%)
Frame = -1
Query: 661 EDRISDYSDLNRIICTGHCNLIYPTILHQNSNLFSKRRRNRLIIPLQS 518
EDRISDYSDLNRI C G CNLIYPTILHQNS+LFSKRRRNR IIPLQS
Sbjct: 540 EDRISDYSDLNRIRCNGRCNLIYPTILHQNSDLFSKRRRNRFIIPLQS 587
>gb|ADO13864.1| RNA polymerase beta subunit, partial (chloroplast) [Forgesia
racemosa]
Length = 1142
Score = 88.6 bits (218), Expect = 5e-15
Identities = 39/48 (81%), Positives = 45/48 (93%)
Frame = -1
Query: 661 EDRISDYSDLNRIICTGHCNLIYPTILHQNSNLFSKRRRNRLIIPLQS 518
EDR+ DYS+LNRIIC+GHCN+IYPTILH NS+L +KRRRNRLIIPLQS
Sbjct: 349 EDRVPDYSELNRIICSGHCNIIYPTILHANSDLLAKRRRNRLIIPLQS 396
>gb|AII18682.1| RNA polymerase beta' subunit, partial (chloroplast) [Viburnum
taiwanianum]
Length = 1384
Score = 85.9 bits (211), Expect = 3e-14
Identities = 39/48 (81%), Positives = 43/48 (89%)
Frame = -1
Query: 661 EDRISDYSDLNRIICTGHCNLIYPTILHQNSNLFSKRRRNRLIIPLQS 518
EDRI DYS+LNRIICTG CNLIYP ILH+NS+L +KRRRNR IIPLQS
Sbjct: 538 EDRIPDYSELNRIICTGRCNLIYPAILHENSDLLAKRRRNRFIIPLQS 585
>gb|AII18681.1| RNA polymerase beta' subunit, partial (chloroplast) [Viburnum
sieboldii]
Length = 1384
Score = 85.9 bits (211), Expect = 3e-14
Identities = 39/48 (81%), Positives = 43/48 (89%)
Frame = -1
Query: 661 EDRISDYSDLNRIICTGHCNLIYPTILHQNSNLFSKRRRNRLIIPLQS 518
EDRI DYS+LNRIICTG CNLIYP ILH+NS+L +KRRRNR IIPLQS
Sbjct: 538 EDRIPDYSELNRIICTGRCNLIYPAILHENSDLLAKRRRNRFIIPLQS 585
>gb|AII18680.1| RNA polymerase beta' subunit, partial (chloroplast) [Viburnum
punctatum]
Length = 1413
Score = 85.9 bits (211), Expect = 3e-14
Identities = 39/48 (81%), Positives = 43/48 (89%)
Frame = -1
Query: 661 EDRISDYSDLNRIICTGHCNLIYPTILHQNSNLFSKRRRNRLIIPLQS 518
EDRI DYS+LNRIICTG CNLIYP ILH+NS+L +KRRRNR IIPLQS
Sbjct: 567 EDRIPDYSELNRIICTGRCNLIYPAILHENSDLLAKRRRNRFIIPLQS 614
>gb|AII18679.1| RNA polymerase beta' subunit, partial (chloroplast) [Viburnum
plicatum]
Length = 1384
Score = 85.9 bits (211), Expect = 3e-14
Identities = 39/48 (81%), Positives = 43/48 (89%)
Frame = -1
Query: 661 EDRISDYSDLNRIICTGHCNLIYPTILHQNSNLFSKRRRNRLIIPLQS 518
EDRI DYS+LNRIICTG CNLIYP ILH+NS+L +KRRRNR IIPLQS
Sbjct: 538 EDRIPDYSELNRIICTGRCNLIYPAILHENSDLLAKRRRNRFIIPLQS 585
>gb|AII18676.1| RNA polymerase beta' subunit, partial (chloroplast) [Viburnum
lutescens]
Length = 1384
Score = 85.9 bits (211), Expect = 3e-14
Identities = 39/48 (81%), Positives = 43/48 (89%)
Frame = -1
Query: 661 EDRISDYSDLNRIICTGHCNLIYPTILHQNSNLFSKRRRNRLIIPLQS 518
EDRI DYS+LNRIICTG CNLIYP ILH+NS+L +KRRRNR IIPLQS
Sbjct: 538 EDRIPDYSELNRIICTGRCNLIYPAILHENSDLLAKRRRNRFIIPLQS 585
>gb|AII18675.1| RNA polymerase beta' subunit, partial (chloroplast) [Viburnum
lentago]
Length = 1384
Score = 85.9 bits (211), Expect = 3e-14
Identities = 39/48 (81%), Positives = 43/48 (89%)
Frame = -1
Query: 661 EDRISDYSDLNRIICTGHCNLIYPTILHQNSNLFSKRRRNRLIIPLQS 518
EDRI DYS+LNRIICTG CNLIYP ILH+NS+L +KRRRNR IIPLQS
Sbjct: 538 EDRIPDYSELNRIICTGRCNLIYPAILHENSDLLAKRRRNRFIIPLQS 585
>gb|AII18674.1| RNA polymerase beta' subunit, partial (chloroplast) [Viburnum
lantanoides]
Length = 1384
Score = 85.9 bits (211), Expect = 3e-14
Identities = 39/48 (81%), Positives = 43/48 (89%)
Frame = -1
Query: 661 EDRISDYSDLNRIICTGHCNLIYPTILHQNSNLFSKRRRNRLIIPLQS 518
EDRI DYS+LNRIICTG CNLIYP ILH+NS+L +KRRRNR IIPLQS
Sbjct: 538 EDRIPDYSELNRIICTGRCNLIYPAILHENSDLLAKRRRNRFIIPLQS 585
>gb|AII18673.1| RNA polymerase beta' subunit, partial (chloroplast) [Viburnum
grandiflorum]
Length = 1384
Score = 85.9 bits (211), Expect = 3e-14
Identities = 39/48 (81%), Positives = 43/48 (89%)
Frame = -1
Query: 661 EDRISDYSDLNRIICTGHCNLIYPTILHQNSNLFSKRRRNRLIIPLQS 518
EDRI DYS+LNRIICTG CNLIYP ILH+NS+L +KRRRNR IIPLQS
Sbjct: 538 EDRIPDYSELNRIICTGRCNLIYPAILHENSDLLAKRRRNRFIIPLQS 585
>gb|AII18672.1| RNA polymerase beta' subunit, partial (chloroplast) [Viburnum
erubescens]
Length = 1384
Score = 85.9 bits (211), Expect = 3e-14
Identities = 39/48 (81%), Positives = 43/48 (89%)
Frame = -1
Query: 661 EDRISDYSDLNRIICTGHCNLIYPTILHQNSNLFSKRRRNRLIIPLQS 518
EDRI DYS+LNRIICTG CNLIYP ILH+NS+L +KRRRNR IIPLQS
Sbjct: 538 EDRIPDYSELNRIICTGRCNLIYPAILHENSDLLAKRRRNRFIIPLQS 585
>gb|AII18668.1| RNA polymerase beta' subunit, partial (chloroplast) [Viburnum
clemensae]
Length = 1384
Score = 85.9 bits (211), Expect = 3e-14
Identities = 39/48 (81%), Positives = 43/48 (89%)
Frame = -1
Query: 661 EDRISDYSDLNRIICTGHCNLIYPTILHQNSNLFSKRRRNRLIIPLQS 518
EDRI DYS+LNRIICTG CNLIYP ILH+NS+L +KRRRNR IIPLQS
Sbjct: 538 EDRIPDYSELNRIICTGRCNLIYPAILHENSDLLAKRRRNRFIIPLQS 585
>gb|AII18667.1| RNA polymerase beta' subunit, partial (chloroplast) [Viburnum
cassinoides]
Length = 1384
Score = 85.9 bits (211), Expect = 3e-14
Identities = 39/48 (81%), Positives = 43/48 (89%)
Frame = -1
Query: 661 EDRISDYSDLNRIICTGHCNLIYPTILHQNSNLFSKRRRNRLIIPLQS 518
EDRI DYS+LNRIICTG CNLIYP ILH+NS+L +KRRRNR IIPLQS
Sbjct: 538 EDRIPDYSELNRIICTGRCNLIYPAILHENSDLLAKRRRNRFIIPLQS 585
>gb|AII18666.1| RNA polymerase beta' subunit, partial (chloroplast) [Viburnum
carlesii]
Length = 1384
Score = 85.9 bits (211), Expect = 3e-14
Identities = 39/48 (81%), Positives = 43/48 (89%)
Frame = -1
Query: 661 EDRISDYSDLNRIICTGHCNLIYPTILHQNSNLFSKRRRNRLIIPLQS 518
EDRI DYS+LNRIICTG CNLIYP ILH+NS+L +KRRRNR IIPLQS
Sbjct: 538 EDRIPDYSELNRIICTGRCNLIYPAILHENSDLLAKRRRNRFIIPLQS 585