BLASTX nr result

ID: Forsythia22_contig00031464 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Forsythia22_contig00031464
         (415 letters)

Database: ./nr 
           69,698,275 sequences; 24,982,196,650 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_012830772.1| PREDICTED: RNA polymerase II subunit 5-media...    69   1e-09
ref|XP_011081366.1| PREDICTED: RNA polymerase II subunit 5-media...    67   4e-09
ref|XP_011081367.1| PREDICTED: RNA polymerase II subunit 5-media...    60   4e-07

>ref|XP_012830772.1| PREDICTED: RNA polymerase II subunit 5-mediating protein homolog
           [Erythranthe guttatus] gi|604344001|gb|EYU42818.1|
           hypothetical protein MIMGU_mgv1a009983mg [Erythranthe
           guttata]
          Length = 325

 Score = 68.9 bits (167), Expect = 1e-09
 Identities = 50/135 (37%), Positives = 68/135 (50%)
 Frame = -3

Query: 407 KDAIEDEEYTHILSRIAXXXXXXXXXXXXXXXXXXEQIENDLGCSTSQSFTGQEVRSSKV 228
           K A EDEEY  +L+R+A                  EQI+N+   ++ Q  T +EV S  V
Sbjct: 180 KGAYEDEEYIRLLARMAELEKEEEEAAKGDVSNENEQIQNEPNSTSGQITTDEEVGSLSV 239

Query: 227 EAANLQSLSKDGSSRGKGPALNDSSLNNKALELAEVKEKVQAPVLATADHKVXXXXXXXX 48
           EA+ + ++SK+ SS G  PALN+S +N  +LE    K++VQAP  A              
Sbjct: 240 EASEMPAVSKEVSSHGDYPALNNSMMNT-SLEQPREKKEVQAPPTAN------------- 285

Query: 47  XXXSKAFTGSIVEHA 3
                AFTGSIVE A
Sbjct: 286 ---KTAFTGSIVERA 297


>ref|XP_011081366.1| PREDICTED: RNA polymerase II subunit 5-mediating protein homolog
           isoform X1 [Sesamum indicum]
           gi|747069172|ref|XP_011081368.1| PREDICTED: RNA
           polymerase II subunit 5-mediating protein homolog
           isoform X1 [Sesamum indicum]
          Length = 331

 Score = 67.4 bits (163), Expect = 4e-09
 Identities = 53/141 (37%), Positives = 71/141 (50%), Gaps = 6/141 (4%)
 Frame = -3

Query: 407 KDAIEDEEYTHILSRIAXXXXXXXXXXXXXXXXXXEQIENDLGCSTSQSFTGQEVRSSKV 228
           K ++EDEEY  I SRI                   E+I+N+   + S+  T QEVRSS V
Sbjct: 180 KFSVEDEEYNRIFSRIDELEKEEEEAEKGNESDEDERIQNEPDSNISEMSTHQEVRSSPV 239

Query: 227 EAANLQ------SLSKDGSSRGKGPALNDSSLNNKALELAEVKEKVQAPVLATADHKVXX 66
           +  ++       ++SKDGS     P LN S+++ KALEL E K+KVQAP   +       
Sbjct: 240 QVVDVAKAPEAPAVSKDGSLHCDYPPLNRSTMS-KALELPEEKKKVQAPPSTS------- 291

Query: 65  XXXXXXXXXSKAFTGSIVEHA 3
                    + AFTGSIVEHA
Sbjct: 292 ---------NMAFTGSIVEHA 303


>ref|XP_011081367.1| PREDICTED: RNA polymerase II subunit 5-mediating protein homolog
           isoform X2 [Sesamum indicum]
          Length = 299

 Score = 60.5 bits (145), Expect = 4e-07
 Identities = 43/109 (39%), Positives = 59/109 (54%), Gaps = 6/109 (5%)
 Frame = -3

Query: 407 KDAIEDEEYTHILSRIAXXXXXXXXXXXXXXXXXXEQIENDLGCSTSQSFTGQEVRSSKV 228
           K ++EDEEY  I SRI                   E+I+N+   + S+  T QEVRSS V
Sbjct: 180 KFSVEDEEYNRIFSRIDELEKEEEEAEKGNESDEDERIQNEPDSNISEMSTHQEVRSSPV 239

Query: 227 EAANLQ------SLSKDGSSRGKGPALNDSSLNNKALELAEVKEKVQAP 99
           +  ++       ++SKDGS     P LN S+++ KALEL E K+KVQAP
Sbjct: 240 QVVDVAKAPEAPAVSKDGSLHCDYPPLNRSTMS-KALELPEEKKKVQAP 287


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