BLASTX nr result
ID: Forsythia22_contig00028580
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Forsythia22_contig00028580
(374 letters)
Database: ./nr
69,698,275 sequences; 24,982,196,650 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|YP_009110644.1| Ycf2 protein (chloroplast) [Hesperelaea palm... 89 9e-16
ref|YP_003359401.1| Ycf2 (chloroplast) [Olea europaea] gi|283795... 89 9e-16
ref|YP_004564046.1| Ycf2 protein [Olea woodiana subsp. woodiana]... 89 9e-16
emb|CBR23873.1| Ycf2 protein [Olea europaea subsp. cuspidata] gi... 89 9e-16
ref|YP_004376463.1| Ycf2 protein [Olea europaea subsp. europaea]... 89 9e-16
gb|AEK71866.1| hypothetical chloroplast RF2 [Davilla nitida] 89 1e-15
gb|AEK71860.1| hypothetical chloroplast RF2 [Curatella americana] 89 1e-15
gb|AEK71885.1| hypothetical chloroplast RF2 [Pinzona coriacea] 88 3e-15
ref|YP_009019931.1| hypothetical chloroplast RF21 (chloroplast) ... 87 6e-15
gb|AIW05477.1| hypothetical chloroplast protein [Neobracea baham... 86 7e-15
gb|AEK71873.1| hypothetical chloroplast RF2 [Hibbertia banksii] 86 7e-15
gb|AEK71841.1| hypothetical chloroplast RF2 [Acrotrema costatum] 86 7e-15
gb|AHF71993.1| Ycf2 (chloroplast) [Rosa odorata var. gigantea] g... 86 1e-14
ref|YP_009040250.1| hypothetical chloroplast RF2 [Fragaria iinum... 86 1e-14
gb|AGN72008.1| hypothetical chloroplast RF2 [Dasiphora fruticosa... 86 1e-14
gb|AFS89534.1| putative RF2 protein, partial (chloroplast) [Frag... 86 1e-14
gb|AFS35484.1| hypothetical chloroplast RF2, partial [Fragaria p... 86 1e-14
ref|YP_006883306.1| hypothetical chloroplast RF2 (chloroplast) [... 86 1e-14
gb|AFQ39524.1| putative chloroplast RF2 [Fragaria moupinensis] 86 1e-14
gb|AFQ39515.1| putative chloroplast RF2 [Fragaria chinensis] 86 1e-14
>ref|YP_009110644.1| Ycf2 protein (chloroplast) [Hesperelaea palmeri]
gi|731971893|ref|YP_009110664.1| Ycf2 protein
(chloroplast) [Hesperelaea palmeri]
gi|725798328|emb|CED79804.1| Ycf2 protein (chloroplast)
[Hesperelaea palmeri] gi|725798348|emb|CED79824.1| Ycf2
protein (chloroplast) [Hesperelaea palmeri]
Length = 2165
Score = 89.4 bits (220), Expect = 9e-16
Identities = 40/45 (88%), Positives = 41/45 (91%)
Frame = -1
Query: 227 EKCFEKRQMYRRDSAFSTLSKWNLFQTYMPWFLNLTGYKYLNLIF 93
+KC EK QMYRRDSAFSTLSKWNLFQTYMPWFL TGYKYLNLIF
Sbjct: 1089 KKCVEKGQMYRRDSAFSTLSKWNLFQTYMPWFLTSTGYKYLNLIF 1133
>ref|YP_003359401.1| Ycf2 (chloroplast) [Olea europaea] gi|283795030|ref|YP_003359421.1|
Ycf2 (chloroplast) [Olea europaea]
gi|281428729|gb|ADA69968.1| Ycf2 (chloroplast) [Olea
europaea] gi|281428749|gb|ADA69988.1| Ycf2 (chloroplast)
[Olea europaea] gi|291059296|gb|ADD72132.1| hypothetical
chloroplast RF21 [Olea europaea]
gi|291059317|gb|ADD72153.1| hypothetical chloroplast RF21
[Olea europaea]
Length = 2277
Score = 89.4 bits (220), Expect = 9e-16
Identities = 40/45 (88%), Positives = 41/45 (91%)
Frame = -1
Query: 227 EKCFEKRQMYRRDSAFSTLSKWNLFQTYMPWFLNLTGYKYLNLIF 93
+KC EK QMYRRDSAFSTLSKWNLFQTYMPWFL TGYKYLNLIF
Sbjct: 1201 KKCVEKGQMYRRDSAFSTLSKWNLFQTYMPWFLTSTGYKYLNLIF 1245
>ref|YP_004564046.1| Ycf2 protein [Olea woodiana subsp. woodiana]
gi|334701681|ref|YP_004564066.1| Ycf2 protein [Olea
woodiana subsp. woodiana] gi|334084701|emb|CBS29394.1|
Ycf2 protein [Olea woodiana subsp. woodiana]
gi|334084721|emb|CBS29415.1| Ycf2 protein [Olea woodiana
subsp. woodiana]
Length = 2165
Score = 89.4 bits (220), Expect = 9e-16
Identities = 40/45 (88%), Positives = 41/45 (91%)
Frame = -1
Query: 227 EKCFEKRQMYRRDSAFSTLSKWNLFQTYMPWFLNLTGYKYLNLIF 93
+KC EK QMYRRDSAFSTLSKWNLFQTYMPWFL TGYKYLNLIF
Sbjct: 1089 KKCVEKGQMYRRDSAFSTLSKWNLFQTYMPWFLTSTGYKYLNLIF 1133
>emb|CBR23873.1| Ycf2 protein [Olea europaea subsp. cuspidata]
gi|334084463|emb|CBR23893.1| Ycf2 protein [Olea europaea
subsp. cuspidata]
Length = 2165
Score = 89.4 bits (220), Expect = 9e-16
Identities = 40/45 (88%), Positives = 41/45 (91%)
Frame = -1
Query: 227 EKCFEKRQMYRRDSAFSTLSKWNLFQTYMPWFLNLTGYKYLNLIF 93
+KC EK QMYRRDSAFSTLSKWNLFQTYMPWFL TGYKYLNLIF
Sbjct: 1089 KKCVEKGQMYRRDSAFSTLSKWNLFQTYMPWFLTSTGYKYLNLIF 1133
>ref|YP_004376463.1| Ycf2 protein [Olea europaea subsp. europaea]
gi|330850805|ref|YP_004376483.1| Ycf2 protein [Olea
europaea subsp. europaea]
gi|334700324|ref|YP_004563823.1| Ycf2 protein [Olea
europaea subsp. cuspidata]
gi|334700344|ref|YP_004563843.1| Ycf2 protein [Olea
europaea subsp. cuspidata]
gi|334701930|ref|YP_004564539.1| Ycf2 protein [Olea
europaea subsp. maroccana]
gi|334701950|ref|YP_004564559.1| Ycf2 protein [Olea
europaea subsp. maroccana] gi|328795475|emb|CBR30357.1|
Ycf2 protein [Olea europaea subsp. europaea]
gi|328795495|emb|CBR30377.1| Ycf2 protein [Olea europaea
subsp. europaea] gi|334084529|emb|CBR24666.1| Ycf2
protein [Olea europaea subsp. europaea]
gi|334084549|emb|CBR24687.1| Ycf2 protein [Olea europaea
subsp. europaea] gi|334084615|emb|CBR30450.1| Ycf2
protein [Olea europaea subsp. europaea]
gi|334084635|emb|CBR30471.1| Ycf2 protein [Olea europaea
subsp. europaea] gi|334084906|emb|CBS29285.1| Ycf2
protein [Olea europaea subsp. maroccana]
gi|334084926|emb|CBS29312.1| Ycf2 protein [Olea europaea
subsp. maroccana] gi|334084992|emb|CBJ04340.1| Ycf2
protein [Olea europaea subsp. cuspidata]
gi|334085012|emb|CBJ04360.1| Ycf2 protein [Olea europaea
subsp. cuspidata] gi|334085078|emb|CBR23781.1| Ycf2
protein [Olea europaea subsp. cuspidata]
gi|334085098|emb|CBR23801.1| Ycf2 protein [Olea europaea
subsp. cuspidata] gi|510934446|emb|CCQ09144.1| Ycf2
protein (chloroplast) [Olea europaea subsp. europaea]
gi|510934466|emb|CCQ09164.1| Ycf2 prot (chloroplast)
[Olea europaea subsp. europaea]
Length = 2165
Score = 89.4 bits (220), Expect = 9e-16
Identities = 40/45 (88%), Positives = 41/45 (91%)
Frame = -1
Query: 227 EKCFEKRQMYRRDSAFSTLSKWNLFQTYMPWFLNLTGYKYLNLIF 93
+KC EK QMYRRDSAFSTLSKWNLFQTYMPWFL TGYKYLNLIF
Sbjct: 1089 KKCVEKGQMYRRDSAFSTLSKWNLFQTYMPWFLTSTGYKYLNLIF 1133
>gb|AEK71866.1| hypothetical chloroplast RF2 [Davilla nitida]
Length = 2300
Score = 89.0 bits (219), Expect = 1e-15
Identities = 42/48 (87%), Positives = 43/48 (89%), Gaps = 3/48 (6%)
Frame = -1
Query: 227 EKCFEKRQMYR---RDSAFSTLSKWNLFQTYMPWFLNLTGYKYLNLIF 93
+KC EKRQMYR RDSAFSTLSKWNLFQTYMPWFL LTGYKYLNLIF
Sbjct: 1209 KKCVEKRQMYRTFQRDSAFSTLSKWNLFQTYMPWFLTLTGYKYLNLIF 1256
>gb|AEK71860.1| hypothetical chloroplast RF2 [Curatella americana]
Length = 2300
Score = 89.0 bits (219), Expect = 1e-15
Identities = 42/48 (87%), Positives = 43/48 (89%), Gaps = 3/48 (6%)
Frame = -1
Query: 227 EKCFEKRQMYR---RDSAFSTLSKWNLFQTYMPWFLNLTGYKYLNLIF 93
+KC EKRQMYR RDSAFSTLSKWNLFQTYMPWFL LTGYKYLNLIF
Sbjct: 1209 KKCVEKRQMYRTFQRDSAFSTLSKWNLFQTYMPWFLTLTGYKYLNLIF 1256
>gb|AEK71885.1| hypothetical chloroplast RF2 [Pinzona coriacea]
Length = 2297
Score = 87.8 bits (216), Expect = 3e-15
Identities = 41/48 (85%), Positives = 43/48 (89%), Gaps = 3/48 (6%)
Frame = -1
Query: 227 EKCFEKRQMYR---RDSAFSTLSKWNLFQTYMPWFLNLTGYKYLNLIF 93
+KC EKRQMYR RDS+FSTLSKWNLFQTYMPWFL LTGYKYLNLIF
Sbjct: 1209 KKCVEKRQMYRTFQRDSSFSTLSKWNLFQTYMPWFLTLTGYKYLNLIF 1256
>ref|YP_009019931.1| hypothetical chloroplast RF21 (chloroplast) [Azadirachta indica]
gi|595789742|ref|YP_009019949.1| hypothetical chloroplast
RF21 (chloroplast) [Azadirachta indica]
gi|586947578|gb|AHJ91361.1| hypothetical chloroplast RF21
(chloroplast) [Azadirachta indica]
gi|586947597|gb|AHJ91380.1| hypothetical chloroplast RF21
(chloroplast) [Azadirachta indica]
Length = 2275
Score = 86.7 bits (213), Expect = 6e-15
Identities = 41/48 (85%), Positives = 42/48 (87%), Gaps = 3/48 (6%)
Frame = -1
Query: 227 EKCFEKRQMYR---RDSAFSTLSKWNLFQTYMPWFLNLTGYKYLNLIF 93
+KC EKRQMYR RDSAFSTLSKWNLFQTYMPWFL TGYKYLNLIF
Sbjct: 1200 KKCVEKRQMYRTFQRDSAFSTLSKWNLFQTYMPWFLTSTGYKYLNLIF 1247
>gb|AIW05477.1| hypothetical chloroplast protein [Neobracea bahamensis]
gi|702075611|gb|AIW05494.1| hypothetical chloroplast
protein [Neobracea bahamensis]
Length = 2272
Score = 86.3 bits (212), Expect = 7e-15
Identities = 44/66 (66%), Positives = 48/66 (72%), Gaps = 3/66 (4%)
Frame = -1
Query: 227 EKCFEKRQMYR---RDSAFSTLSKWNLFQTYMPWFLNLTGYKYLNLIFFIRIAEN*KIGT 57
+KC EK QMYR RDSAFSTLSKWNLFQTYMPWFL TGYKYLNLIF ++ I
Sbjct: 1202 KKCVEKGQMYRTFQRDSAFSTLSKWNLFQTYMPWFLTSTGYKYLNLIFLDTFSDLLPISQ 1261
Query: 56 EFESHF 39
+F S F
Sbjct: 1262 KFVSIF 1267
>gb|AEK71873.1| hypothetical chloroplast RF2 [Hibbertia banksii]
Length = 2300
Score = 86.3 bits (212), Expect = 7e-15
Identities = 41/48 (85%), Positives = 42/48 (87%), Gaps = 3/48 (6%)
Frame = -1
Query: 227 EKCFEKRQMYR---RDSAFSTLSKWNLFQTYMPWFLNLTGYKYLNLIF 93
+KC EK QMYR RDSAFSTLSKWNLFQTYMPWFL LTGYKYLNLIF
Sbjct: 1209 KKCVEKGQMYRTFQRDSAFSTLSKWNLFQTYMPWFLTLTGYKYLNLIF 1256
>gb|AEK71841.1| hypothetical chloroplast RF2 [Acrotrema costatum]
Length = 2297
Score = 86.3 bits (212), Expect = 7e-15
Identities = 41/48 (85%), Positives = 42/48 (87%), Gaps = 3/48 (6%)
Frame = -1
Query: 227 EKCFEKRQMYR---RDSAFSTLSKWNLFQTYMPWFLNLTGYKYLNLIF 93
+KC EK QMYR RDSAFSTLSKWNLFQTYMPWFL LTGYKYLNLIF
Sbjct: 1209 KKCVEKGQMYRTFQRDSAFSTLSKWNLFQTYMPWFLTLTGYKYLNLIF 1256
>gb|AHF71993.1| Ycf2 (chloroplast) [Rosa odorata var. gigantea]
gi|573015415|gb|AHF71994.1| Ycf2 (chloroplast) [Rosa
odorata var. gigantea]
Length = 2279
Score = 85.9 bits (211), Expect = 1e-14
Identities = 40/48 (83%), Positives = 42/48 (87%), Gaps = 3/48 (6%)
Frame = -1
Query: 227 EKCFEKRQMYR---RDSAFSTLSKWNLFQTYMPWFLNLTGYKYLNLIF 93
+KCFEK QMYR RDSAFSTLSKWN+FQTYMPWFL TGYKYLNLIF
Sbjct: 1206 KKCFEKGQMYRTFQRDSAFSTLSKWNIFQTYMPWFLTSTGYKYLNLIF 1253
>ref|YP_009040250.1| hypothetical chloroplast RF2 [Fragaria iinumae]
gi|657171786|ref|YP_009040268.1| hypothetical chloroplast
RF2 [Fragaria iinumae] gi|511265987|gb|AGN72093.1|
hypothetical chloroplast RF2 [Fragaria iinumae]
gi|511266005|gb|AGN72111.1| hypothetical chloroplast RF2
[Fragaria iinumae] gi|823334412|gb|AKI31125.1| Ycf2
(chloroplast) [Fragaria iinumae]
Length = 2275
Score = 85.9 bits (211), Expect = 1e-14
Identities = 40/48 (83%), Positives = 42/48 (87%), Gaps = 3/48 (6%)
Frame = -1
Query: 227 EKCFEKRQMYR---RDSAFSTLSKWNLFQTYMPWFLNLTGYKYLNLIF 93
+KCFEK QMYR RDSAFSTLSKWN+FQTYMPWFL TGYKYLNLIF
Sbjct: 1204 KKCFEKGQMYRTFQRDSAFSTLSKWNIFQTYMPWFLTSTGYKYLNLIF 1251
>gb|AGN72008.1| hypothetical chloroplast RF2 [Dasiphora fruticosa subsp. floribunda]
gi|511265919|gb|AGN72026.1| hypothetical chloroplast RF2
[Dasiphora fruticosa subsp. floribunda]
Length = 2277
Score = 85.9 bits (211), Expect = 1e-14
Identities = 40/48 (83%), Positives = 42/48 (87%), Gaps = 3/48 (6%)
Frame = -1
Query: 227 EKCFEKRQMYR---RDSAFSTLSKWNLFQTYMPWFLNLTGYKYLNLIF 93
+KCFEK QMYR RDSAFSTLSKWN+FQTYMPWFL TGYKYLNLIF
Sbjct: 1206 KKCFEKGQMYRTFQRDSAFSTLSKWNIFQTYMPWFLTSTGYKYLNLIF 1253
>gb|AFS89534.1| putative RF2 protein, partial (chloroplast) [Fragaria chiloensis]
Length = 1209
Score = 85.9 bits (211), Expect = 1e-14
Identities = 40/48 (83%), Positives = 42/48 (87%), Gaps = 3/48 (6%)
Frame = -1
Query: 227 EKCFEKRQMYR---RDSAFSTLSKWNLFQTYMPWFLNLTGYKYLNLIF 93
+KCFEK QMYR RDSAFSTLSKWN+FQTYMPWFL TGYKYLNLIF
Sbjct: 138 KKCFEKGQMYRTFQRDSAFSTLSKWNIFQTYMPWFLTSTGYKYLNLIF 185
>gb|AFS35484.1| hypothetical chloroplast RF2, partial [Fragaria pentaphylla]
Length = 68
Score = 85.9 bits (211), Expect = 1e-14
Identities = 40/48 (83%), Positives = 42/48 (87%), Gaps = 3/48 (6%)
Frame = -1
Query: 227 EKCFEKRQMYR---RDSAFSTLSKWNLFQTYMPWFLNLTGYKYLNLIF 93
+KCFEK QMYR RDSAFSTLSKWN+FQTYMPWFL TGYKYLNLIF
Sbjct: 10 KKCFEKGQMYRTFQRDSAFSTLSKWNIFQTYMPWFLTSTGYKYLNLIF 57
>ref|YP_006883306.1| hypothetical chloroplast RF2 (chloroplast) [Fragaria vesca subsp.
bracteata] gi|408830362|ref|YP_006883379.1| hypothetical
chloroplast RF2 [Fragaria mandshurica]
gi|428697243|ref|YP_007025426.1| hypothetical chloroplast
RF2 (chloroplast) [Fragaria chiloensis]
gi|428697261|ref|YP_007025444.1| hypothetical chloroplast
RF2 (chloroplast) [Fragaria chiloensis]
gi|428697329|ref|YP_007025511.1| hypothetical chloroplast
RF2 (chloroplast) [Fragaria virginiana]
gi|428697347|ref|YP_007025529.1| hypothetical chloroplast
RF2 (chloroplast) [Fragaria virginiana]
gi|357198782|gb|AET62698.1| hypothetical chloroplast RF2
(chloroplast) [Fragaria chiloensis]
gi|357198800|gb|AET62716.1| hypothetical chloroplast RF2
(chloroplast) [Fragaria chiloensis]
gi|357198868|gb|AET62783.1| hypothetical chloroplast RF2
(chloroplast) [Fragaria virginiana]
gi|357198886|gb|AET62801.1| hypothetical chloroplast RF2
(chloroplast) [Fragaria virginiana]
gi|378554750|gb|AFC17685.1| hypothetical chloroplast RF2
(chloroplast) [Fragaria vesca subsp. bracteata]
gi|378554824|gb|AFC17758.1| hypothetical chloroplast RF2
[Fragaria mandshurica] gi|511265643|gb|AGN71753.1|
hypothetical chloroplast RF2 [Fragaria vesca subsp.
bracteata] gi|511265661|gb|AGN71771.1| hypothetical
chloroplast RF2 [Fragaria vesca subsp. bracteata]
gi|511265729|gb|AGN71838.1| hypothetical chloroplast RF2
[Fragaria vesca subsp. bracteata]
gi|511265747|gb|AGN71856.1| hypothetical chloroplast RF2
[Fragaria vesca subsp. bracteata]
gi|511265815|gb|AGN71923.1| hypothetical chloroplast RF2
[Fragaria vesca subsp. bracteata]
gi|511265833|gb|AGN71941.1| hypothetical chloroplast RF2
[Fragaria vesca subsp. bracteata]
gi|511266073|gb|AGN72178.1| hypothetical chloroplast RF2
[Fragaria mandshurica] gi|511266091|gb|AGN72196.1|
hypothetical chloroplast RF2 [Fragaria mandshurica]
gi|823333580|gb|AKI30891.1| Ycf2 (chloroplast) [Fragaria
chiloensis] gi|823333860|gb|AKI30970.1| Ycf2
(chloroplast) [Fragaria mandshurica]
gi|823334195|gb|AKI31047.1| Ycf2 (chloroplast) [Fragaria
vesca subsp. bracteata] gi|823334752|gb|AKI31160.1| Ycf2
(chloroplast) [Fragaria vesca subsp. bracteata]
gi|823335237|gb|AKI31282.1| Ycf2 (chloroplast) [Fragaria
virginiana]
Length = 2275
Score = 85.9 bits (211), Expect = 1e-14
Identities = 40/48 (83%), Positives = 42/48 (87%), Gaps = 3/48 (6%)
Frame = -1
Query: 227 EKCFEKRQMYR---RDSAFSTLSKWNLFQTYMPWFLNLTGYKYLNLIF 93
+KCFEK QMYR RDSAFSTLSKWN+FQTYMPWFL TGYKYLNLIF
Sbjct: 1204 KKCFEKGQMYRTFQRDSAFSTLSKWNIFQTYMPWFLTSTGYKYLNLIF 1251
>gb|AFQ39524.1| putative chloroplast RF2 [Fragaria moupinensis]
Length = 2273
Score = 85.9 bits (211), Expect = 1e-14
Identities = 40/48 (83%), Positives = 42/48 (87%), Gaps = 3/48 (6%)
Frame = -1
Query: 227 EKCFEKRQMYR---RDSAFSTLSKWNLFQTYMPWFLNLTGYKYLNLIF 93
+KCFEK QMYR RDSAFSTLSKWN+FQTYMPWFL TGYKYLNLIF
Sbjct: 1202 KKCFEKGQMYRTFQRDSAFSTLSKWNIFQTYMPWFLTSTGYKYLNLIF 1249
>gb|AFQ39515.1| putative chloroplast RF2 [Fragaria chinensis]
Length = 2273
Score = 85.9 bits (211), Expect = 1e-14
Identities = 40/48 (83%), Positives = 42/48 (87%), Gaps = 3/48 (6%)
Frame = -1
Query: 227 EKCFEKRQMYR---RDSAFSTLSKWNLFQTYMPWFLNLTGYKYLNLIF 93
+KCFEK QMYR RDSAFSTLSKWN+FQTYMPWFL TGYKYLNLIF
Sbjct: 1202 KKCFEKGQMYRTFQRDSAFSTLSKWNIFQTYMPWFLTSTGYKYLNLIF 1249