BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Forsythia22_contig00024779
         (530 letters)

Database: ./nr 
           69,698,275 sequences; 24,982,196,650 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN74951.1| hypothetical protein VITISV_030567 [Vitis vinifera]   114   9e-29
gb|AAT85031.1| putative polyprotein [Oryza sativa Japonica Group...   105   1e-24
ref|XP_008350396.1| PREDICTED: uncharacterized protein LOC103413...    99   1e-24
ref|XP_008374275.1| PREDICTED: retrovirus-related Pol polyprotei...    94   4e-24
gb|ABA98049.1| retrotransposon protein, putative, Ty1-copia subc...   108   5e-24
ref|XP_006465491.1| PREDICTED: uncharacterized protein LOC102624...   112   9e-24
ref|XP_008385533.1| PREDICTED: uncharacterized protein LOC103448...    97   2e-23
gb|ACY72569.1| unknown [Oryza sativa Japonica Group]                  108   2e-23
ref|XP_012575528.1| PREDICTED: uncharacterized protein LOC105853...    89   2e-23
ref|XP_004513130.2| PREDICTED: uncharacterized protein LOC101488...    92   3e-23
gb|AAT07563.1| putative polyprotein [Oryza sativa Japonica Group...   104   4e-23
emb|CAN77295.1| hypothetical protein VITISV_005638 [Vitis vinifera]   100   1e-22
dbj|BAB90546.1| putative rice retrotransposon retrofit gag/pol p...   106   2e-22
gb|ACV42639.1| gag/pol [Oryza sativa Japonica Group]                  106   2e-22
gb|AAU10682.1| putative polyprotein [Oryza sativa Japonica Group]     102   2e-22
gb|ABG00000.1| retrotransposon protein, putative, Ty1-copia subc...   103   2e-22
gb|AAK51235.1|AF287471_1 polyprotein [Arabidopsis thaliana]            97   2e-22
emb|CAN79884.1| hypothetical protein VITISV_002539 [Vitis vinifera]    93   5e-22
emb|CAN83392.1| hypothetical protein VITISV_041406 [Vitis vinifera]   100   5e-22
emb|CAN76948.1| hypothetical protein VITISV_017167 [Vitis vinifera]    98   8e-22

>emb|CAN74951.1| hypothetical protein VITISV_030567 [Vitis vinifera]
          Length = 2203

 Score =  114 bits (286), Expect(3) = 9e-29
 Identities = 59/109 (54%), Positives = 71/109 (65%), Gaps = 3/109 (2%)
 Frame = +3

Query: 129 FFDEHTHYTWIFPMKTKSDLFLIFTQFHALVERQFDKKLKFLQSD---EYRVLQPFLTKL 299
           F D  T+YTWI+P + KS    I  QF ALV+R+F  KLK LQ+D   E+  LQ  L K 
Sbjct: 527 FVDAFTNYTWIYPRQQKSQATSIVLQFIALVDRKFPTKLKCLQTDWGGEFHPLQSLLQKK 586

Query: 300 GIVFRHSCPHKHTPIEWDVERKHRHIVELGLTLLSKENMPLRFWWDAFA 446
           GI+FRH CPH H      VERKHR IVE+GLTLL+K  +P  FWW AF+
Sbjct: 587 GILFRHPCPHVHQQ-NGKVERKHRSIVEIGLTLLAKSQLPFTFWWHAFS 634



 Score = 36.6 bits (83), Expect(3) = 9e-29
 Identities = 14/40 (35%), Positives = 24/40 (60%)
 Frame = +2

Query: 11  QTVFPSSVNKAKFLLDVVHTAVWRPAPIRSAEGFGYYVKF 130
           Q   P+++NK +   ++V + VW PA   S +G+ YY+ F
Sbjct: 488 QFPLPTTINKTQVPFELVFSDVWEPAHTTSCDGYKYYIAF 527



 Score = 22.3 bits (46), Expect(3) = 9e-29
 Identities = 10/21 (47%), Positives = 13/21 (61%)
 Frame = +2

Query: 422 TFLVGCLCTAVFLINRLPSHV 484
           TF      TA +L+NRLP+ V
Sbjct: 627 TFWWHAFSTATYLLNRLPTPV 647


>gb|AAT85031.1| putative polyprotein [Oryza sativa Japonica Group]
           gi|108708884|gb|ABF96679.1| retrotransposon protein,
           putative, Ty1-copia subclass [Oryza sativa Japonica
           Group]
          Length = 1437

 Score =  105 bits (261), Expect(2) = 1e-24
 Identities = 51/109 (46%), Positives = 74/109 (67%), Gaps = 3/109 (2%)
 Frame = +3

Query: 126 NFFDEHTHYTWIFPMKTKSDLFLIFTQFHALVERQFDKKLKFLQSD---EYRVLQPFLTK 296
           +F D+++ +TWI+ +K KS++F  F +F +LVER F++K+  +Q+D   EY+ L  F  K
Sbjct: 536 SFIDDYSKFTWIYLLKYKSEVFDKFHEFQSLVERLFNRKIVAMQTDWGGEYQKLHSFFNK 595

Query: 297 LGIVFRHSCPHKHTPIEWDVERKHRHIVELGLTLLSKENMPLRFWWDAF 443
           +GI    SCPH H       ERKHRHIVE+GL LL+  +MPL+FW +AF
Sbjct: 596 VGITHHVSCPHTHQQ-NGSAERKHRHIVEVGLALLAYSSMPLKFWGEAF 643



 Score = 34.3 bits (77), Expect(2) = 1e-24
 Identities = 17/40 (42%), Positives = 25/40 (62%)
 Frame = +2

Query: 11  QTVFPSSVNKAKFLLDVVHTAVWRPAPIRSAEGFGYYVKF 130
           Q  FP S +++K+ L++V + VW PAP +S     YYV F
Sbjct: 499 QLSFPKSTSESKYPLELVFSDVWGPAP-QSVGNNKYYVSF 537


>ref|XP_008350396.1| PREDICTED: uncharacterized protein LOC103413729 [Malus domestica]
          Length = 800

 Score = 98.6 bits (244), Expect(2) = 1e-24
 Identities = 50/117 (42%), Positives = 74/117 (63%), Gaps = 6/117 (5%)
 Frame = +3

Query: 126 NFFDEHTHYTWIFPMKTKSDLFLIFTQFHALVERQFDKKLKFLQSD-----EYRVLQPFL 290
           +F D+++ + WIFPM  KSD F IF +F A V  QF++ +K+LQ D     E +V + FL
Sbjct: 576 SFIDDYSRFVWIFPMVNKSDAFSIFVKFCAFVTTQFNQNVKYLQFDGGGEYESKVFKDFL 635

Query: 291 TKLGIVFRHSCPHKHTPIEWDV-ERKHRHIVELGLTLLSKENMPLRFWWDAFARLCF 458
              GI+ + SCP  HTP +  + ERKHRH+VE  LTL+++  +P+ FW+ A +   F
Sbjct: 636 QNKGIIHQLSCP--HTPQQNGIAERKHRHLVETALTLMNESGVPIPFWYHACSHXAF 690



 Score = 40.8 bits (94), Expect(2) = 1e-24
 Identities = 16/42 (38%), Positives = 26/42 (61%)
 Frame = +2

Query: 5   LSQTVFPSSVNKAKFLLDVVHTAVWRPAPIRSAEGFGYYVKF 130
           +S+  F     ++K + D +HT VW P+P +S EG+ YY+ F
Sbjct: 536 MSKLPFHVRSERSKAVFDKIHTDVWGPSPQKSVEGYRYYISF 577


>ref|XP_008374275.1| PREDICTED: retrovirus-related Pol polyprotein from transposon TNT
           1-94 [Malus domestica]
          Length = 740

 Score = 93.6 bits (231), Expect(3) = 4e-24
 Identities = 54/113 (47%), Positives = 70/113 (61%), Gaps = 6/113 (5%)
 Frame = +3

Query: 126 NFFDEHTHYTWIFPMKTKSDLFLIFTQFHALVERQFDKKLKFLQSD---EY--RVLQPFL 290
           +F DE T YTWIFPM  K+ +F IF QFHA ++  F   +K LQSD   EY     Q FL
Sbjct: 253 SFIDECTRYTWIFPMNNKAXVFEIFVQFHAYIQNYFSATVKVLQSDGGGEYVSTRFQNFL 312

Query: 291 TKLGIVFRHSCPHKHTPIEWDV-ERKHRHIVELGLTLLSKENMPLRFWWDAFA 446
           T  GIV   SCP  +TP +  + ERK+RH+VE  +TLL K ++  +FW+ A A
Sbjct: 313 TTKGIVHXKSCP--YTPEQNGLAERKNRHLVETAVTLLQKASLSSKFWFHACA 363



 Score = 42.4 bits (98), Expect(3) = 4e-24
 Identities = 17/37 (45%), Positives = 24/37 (64%)
 Frame = +2

Query: 20  FPSSVNKAKFLLDVVHTAVWRPAPIRSAEGFGYYVKF 130
           FP   +K+   L+V+H  VW P+P +S EG+ YYV F
Sbjct: 218 FPVMASKSFVPLEVIHXDVWGPSPTKSIEGYSYYVSF 254



 Score = 21.9 bits (45), Expect(3) = 4e-24
 Identities = 10/19 (52%), Positives = 14/19 (73%)
 Frame = +2

Query: 446 TAVFLINRLPSHVQTKSHS 502
           T+ +L+NRLP+ V  K HS
Sbjct: 364 TSTYLVNRLPTSV-LKMHS 381


>gb|ABA98049.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
           Japonica Group]
          Length = 1460

 Score =  108 bits (270), Expect(2) = 5e-24
 Identities = 53/109 (48%), Positives = 75/109 (68%), Gaps = 3/109 (2%)
 Frame = +3

Query: 126 NFFDEHTHYTWIFPMKTKSDLFLIFTQFHALVERQFDKKLKFLQSD---EYRVLQPFLTK 296
           +F D+ + +TWI+ ++ KS +F  F +F  +VERQFD+K+  +Q+D   EY+ L  F +K
Sbjct: 532 SFIDDFSKFTWIYLIQHKSQVFDKFQEFQVMVERQFDRKILAMQTDWGGEYQSLNSFFSK 591

Query: 297 LGIVFRHSCPHKHTPIEWDVERKHRHIVELGLTLLSKENMPLRFWWDAF 443
           +GIV   SCPH H       ERKHRHIVE+GL+LLS  +MPL+FW +AF
Sbjct: 592 IGIVHHVSCPHTHQQ-NGSAERKHRHIVEIGLSLLSHASMPLKFWDEAF 639



 Score = 28.9 bits (63), Expect(2) = 5e-24
 Identities = 17/40 (42%), Positives = 22/40 (55%)
 Frame = +2

Query: 11  QTVFPSSVNKAKFLLDVVHTAVWRPAPIRSAEGFGYYVKF 130
           Q  FP S + +K  L++V + VW PAP  S     YYV F
Sbjct: 495 QLPFPISSSVSKHPLELVFSDVWGPAP-ESVGRKKYYVSF 533


>ref|XP_006465491.1| PREDICTED: uncharacterized protein LOC102624640 [Citrus sinensis]
          Length = 1682

 Score =  112 bits (281), Expect(2) = 9e-24
 Identities = 50/106 (47%), Positives = 72/106 (67%), Gaps = 3/106 (2%)
 Frame = +3

Query: 150 YTWIFPMKTKSDLFLIFTQFHALVERQFDKKLKFLQSD---EYRVLQPFLTKLGIVFRHS 320
           +TWIFP+  KSD   +FT+F + +E+   + +K +Q+D   E+R    +LT+ GI FRH 
Sbjct: 12  FTWIFPLTAKSDALQVFTEFKSFIEKHLQQHIKTVQTDWGGEFRTFASYLTQFGIQFRHP 71

Query: 321 CPHKHTPIEWDVERKHRHIVELGLTLLSKENMPLRFWWDAFARLCF 458
           CPH H      +ERKHRHIV++GLTLL++ N+PL+FWW+AF    F
Sbjct: 72  CPHIHHQ-NGRIERKHRHIVDIGLTLLAQANLPLKFWWNAFHTAVF 116



 Score = 23.9 bits (50), Expect(2) = 9e-24
 Identities = 10/11 (90%), Positives = 11/11 (100%)
 Frame = +2

Query: 446 TAVFLINRLPS 478
           TAVFLINRLP+
Sbjct: 113 TAVFLINRLPT 123


>ref|XP_008385533.1| PREDICTED: uncharacterized protein LOC103448069 [Malus domestica]
          Length = 852

 Score = 97.4 bits (241), Expect(3) = 2e-23
 Identities = 57/112 (50%), Positives = 69/112 (61%), Gaps = 6/112 (5%)
 Frame = +3

Query: 129 FFDEHTHYTWIFPMKTKSDLFLIFTQFHALVERQFDKKLKFLQSD---EY--RVLQPFLT 293
           F DE T +TWIFP+K KS++F IF +FHA V  QF  K+K LQSD   EY     Q FLT
Sbjct: 656 FIDECTXFTWIFPLKYKSEVFAIFVKFHAFVCTQFSAKVKILQSDGGGEYISSQFQHFLT 715

Query: 294 KLGIVFRHSCPHKHTPIEWDV-ERKHRHIVELGLTLLSKENMPLRFWWDAFA 446
             GI+   SCP  HTP +  + E KHRHIVE  +TLL    +P  FW+ A A
Sbjct: 716 TNGILHHKSCP--HTPEQNGLAEXKHRHIVETAITLLQTAKLPNLFWFHACA 765



 Score = 36.2 bits (82), Expect(3) = 2e-23
 Identities = 14/26 (53%), Positives = 19/26 (73%)
 Frame = +2

Query: 53  LDVVHTAVWRPAPIRSAEGFGYYVKF 130
           L+++H+ VW  AP+ S EGF YYV F
Sbjct: 631 LEIIHSDVWGXAPLLSYEGFRYYVTF 656



 Score = 22.3 bits (46), Expect(3) = 2e-23
 Identities = 9/10 (90%), Positives = 10/10 (100%)
 Frame = +2

Query: 446 TAVFLINRLP 475
           TAV+LINRLP
Sbjct: 766 TAVYLINRLP 775


>gb|ACY72569.1| unknown [Oryza sativa Japonica Group]
          Length = 1436

 Score =  108 bits (271), Expect(2) = 2e-23
 Identities = 57/128 (44%), Positives = 80/128 (62%), Gaps = 3/128 (2%)
 Frame = +3

Query: 126 NFFDEHTHYTWIFPMKTKSDLFLIFTQFHALVERQFDKKLKFLQSD---EYRVLQPFLTK 296
           +F D+ + +TWI+ +K KS++F  F +F ALVER FD+K+  +Q+D   EY+ L  F  K
Sbjct: 538 SFIDDFSKFTWIYLLKYKSEVFEKFKEFQALVERMFDRKIIAMQTDWGGEYQKLNSFFAK 597

Query: 297 LGIVFRHSCPHKHTPIEWDVERKHRHIVELGLTLLSKENMPLRFWWDAFARLCFS*IGCP 476
           +GI    SCPH H       ERKHRHI+E+GL+LLS  +MPL+FW +AF    +     P
Sbjct: 598 IGIDHHVSCPHTHQQ-NGSAERKHRHIIEVGLSLLSYASMPLKFWDEAFVAATYLINRVP 656

Query: 477 LMSRQNLT 500
             + QN T
Sbjct: 657 SKTIQNST 664



 Score = 26.6 bits (57), Expect(2) = 2e-23
 Identities = 15/40 (37%), Positives = 22/40 (55%)
 Frame = +2

Query: 11  QTVFPSSVNKAKFLLDVVHTAVWRPAPIRSAEGFGYYVKF 130
           Q  +  S + ++F L++V + VW PAP  S     YYV F
Sbjct: 501 QLPYVRSTSVSQFPLELVFSDVWGPAP-ESVGRNKYYVSF 539


>ref|XP_012575528.1| PREDICTED: uncharacterized protein LOC105853050 [Cicer arietinum]
          Length = 1108

 Score = 89.4 bits (220), Expect(3) = 2e-23
 Identities = 45/104 (43%), Positives = 66/104 (63%), Gaps = 3/104 (2%)
 Frame = +3

Query: 126 NFFDEHTHYTWIFPMKTKSDLFLIFTQFHALVERQFDKKLKFLQSD---EYRVLQPFLTK 296
           +F D+ + +TWI+P+K KS++   FTQF  + E  F+K++K +Q D   EY+V+Q    +
Sbjct: 465 HFLDDFSRFTWIYPLKQKSNIAQAFTQFKNMAENLFNKRIKAIQCDGGGEYKVVQNHAIE 524

Query: 297 LGIVFRHSCPHKHTPIEWDVERKHRHIVELGLTLLSKENMPLRF 428
            GI FR SCP+  +      ERKH HI E GLTLL++  MPL +
Sbjct: 525 AGIQFRMSCPYT-SQQNGRAERKHIHIAEFGLTLLAQAKMPLHY 567



 Score = 44.7 bits (104), Expect(3) = 2e-23
 Identities = 19/37 (51%), Positives = 26/37 (70%)
 Frame = +2

Query: 20  FPSSVNKAKFLLDVVHTAVWRPAPIRSAEGFGYYVKF 130
           F +S + AK +L++VH  VW PAP+ S+ GF YYV F
Sbjct: 430 FKNSSSHAKKILELVHADVWGPAPVTSSSGFKYYVHF 466



 Score = 21.6 bits (44), Expect(3) = 2e-23
 Identities = 8/10 (80%), Positives = 8/10 (80%)
 Frame = +1

Query: 436 MPLHGCVSHK 465
           MPLH C SHK
Sbjct: 563 MPLHYCNSHK 572


>ref|XP_004513130.2| PREDICTED: uncharacterized protein LOC101488260, partial [Cicer
           arietinum]
          Length = 704

 Score = 91.7 bits (226), Expect(2) = 3e-23
 Identities = 47/98 (47%), Positives = 63/98 (64%), Gaps = 3/98 (3%)
 Frame = +3

Query: 126 NFFDEHTHYTWIFPMKTKSDLFLIFTQFHALVERQFDKKLKFLQSD---EYRVLQPFLTK 296
           +F D+ + +TWIFP+K K +    FTQF  +VE QF KK+K LQ D   EY+ +Q    +
Sbjct: 453 HFIDDFSRFTWIFPLKQKPETVHAFTQFKNMVENQFSKKIKILQCDGGGEYKPVQKIAIE 512

Query: 297 LGIVFRHSCPHKHTPIEWDVERKHRHIVELGLTLLSKE 410
            GI FR SCP+  +      ERKHRH+ ELGLTLL++E
Sbjct: 513 SGIQFRMSCPYT-SQQNGRAERKHRHVAELGLTLLAQE 549



 Score = 43.5 bits (101), Expect(2) = 3e-23
 Identities = 20/37 (54%), Positives = 24/37 (64%)
 Frame = +2

Query: 20  FPSSVNKAKFLLDVVHTAVWRPAPIRSAEGFGYYVKF 130
           F SS + AK  LD++H+ VW PAPI S   F YYV F
Sbjct: 418 FTSSYSHAKEPLDLIHSGVWGPAPILSPSNFKYYVHF 454


>gb|AAT07563.1| putative polyprotein [Oryza sativa Japonica Group]
           gi|46981313|gb|AAT07631.1| putative polyprotein [Oryza
           sativa Japonica Group]
          Length = 1431

 Score =  104 bits (260), Expect(3) = 4e-23
 Identities = 52/109 (47%), Positives = 74/109 (67%), Gaps = 3/109 (2%)
 Frame = +3

Query: 126 NFFDEHTHYTWIFPMKTKSDLFLIFTQFHALVERQFDKKLKFLQSD---EYRVLQPFLTK 296
           +F D+++ + WI+ +K KS++F  F +F  LVERQFD+K+  +Q+D   EY  L  F  +
Sbjct: 525 SFIDDYSKFVWIYFLKHKSEVFQKFHEFQKLVERQFDRKILSMQTDWGGEYLKLHTFFNE 584

Query: 297 LGIVFRHSCPHKHTPIEWDVERKHRHIVELGLTLLSKENMPLRFWWDAF 443
           +GI    SCPH H      VERKHRHIVE+GL+LL+  +MPL+FW +AF
Sbjct: 585 IGISHHVSCPHTHQQ-NGAVERKHRHIVEVGLSLLAHASMPLKFWDEAF 632



 Score = 28.1 bits (61), Expect(3) = 4e-23
 Identities = 15/40 (37%), Positives = 21/40 (52%)
 Frame = +2

Query: 11  QTVFPSSVNKAKFLLDVVHTAVWRPAPIRSAEGFGYYVKF 130
           Q  FP S + +   L+++H+ VW PA   S     YYV F
Sbjct: 488 QLPFPRSTSVSNNPLELIHSDVWGPAS-ESVGAKKYYVSF 526



 Score = 21.6 bits (44), Expect(3) = 4e-23
 Identities = 9/12 (75%), Positives = 10/12 (83%)
 Frame = +2

Query: 449 AVFLINRLPSHV 484
           A +LINRLPS V
Sbjct: 635 ATYLINRLPSKV 646


>emb|CAN77295.1| hypothetical protein VITISV_005638 [Vitis vinifera]
          Length = 1198

 Score =  100 bits (250), Expect(2) = 1e-22
 Identities = 51/113 (45%), Positives = 68/113 (60%), Gaps = 3/113 (2%)
 Frame = +3

Query: 129 FFDEHTHYTWIFPMKTKSDLFLIFTQFHALVERQFDKKLKFLQSD---EYRVLQPFLTKL 299
           F D+++ YTW +P++TK      F +F   VE QFD K+K LQSD   E+R  + FL + 
Sbjct: 475 FLDDYSRYTWFYPLQTKDQALPAFKKFKLQVENQFDAKIKCLQSDNGGEFRSFKTFLQQT 534

Query: 300 GIVFRHSCPHKHTPIEWDVERKHRHIVELGLTLLSKENMPLRFWWDAFARLCF 458
           GI  R SCP+     E  VERKHRH+VE GL LL+  ++P+ FW  AF    F
Sbjct: 535 GIFHRFSCPYNSAQNE-RVERKHRHVVETGLALLAHASLPMEFWQYAFQTATF 586



 Score = 32.0 bits (71), Expect(2) = 1e-22
 Identities = 13/34 (38%), Positives = 22/34 (64%)
 Frame = +2

Query: 29  SVNKAKFLLDVVHTAVWRPAPIRSAEGFGYYVKF 130
           S++ A   L++VHT +W PA ++S  G  Y++ F
Sbjct: 442 SLSCASKPLELVHTDLWGPASVKSTSGARYFILF 475


>dbj|BAB90546.1| putative rice retrotransposon retrofit gag/pol polyprotein [Oryza
           sativa Japonica Group]
          Length = 1448

 Score =  106 bits (264), Expect(2) = 2e-22
 Identities = 55/128 (42%), Positives = 80/128 (62%), Gaps = 3/128 (2%)
 Frame = +3

Query: 126 NFFDEHTHYTWIFPMKTKSDLFLIFTQFHALVERQFDKKLKFLQSD---EYRVLQPFLTK 296
           +F D+ + +TWI+ +K KS++F  F +F ALVER FD+K+  +Q+D   EY+ L  F  +
Sbjct: 541 SFIDDFSKFTWIYLLKYKSEVFEKFKEFQALVERMFDRKIIAMQTDWGGEYQKLNSFFAQ 600

Query: 297 LGIVFRHSCPHKHTPIEWDVERKHRHIVELGLTLLSKENMPLRFWWDAFARLCFS*IGCP 476
           +GI    SCPH H       ERKH+HI+E+GL+LLS  +MPL+FW +AF    +     P
Sbjct: 601 IGIDHHVSCPHTHQQ-NGSAERKHKHIIEVGLSLLSYASMPLKFWDEAFVAATYLINRIP 659

Query: 477 LMSRQNLT 500
             + QN T
Sbjct: 660 SKTIQNST 667



 Score = 26.2 bits (56), Expect(2) = 2e-22
 Identities = 15/40 (37%), Positives = 22/40 (55%)
 Frame = +2

Query: 11  QTVFPSSVNKAKFLLDVVHTAVWRPAPIRSAEGFGYYVKF 130
           Q  +  S + ++F L++V + VW PAP  S     YYV F
Sbjct: 504 QLPYIRSTSVSQFPLELVFSDVWGPAP-ESVGRNKYYVSF 542


>gb|ACV42639.1| gag/pol [Oryza sativa Japonica Group]
          Length = 1448

 Score =  106 bits (264), Expect(2) = 2e-22
 Identities = 55/128 (42%), Positives = 80/128 (62%), Gaps = 3/128 (2%)
 Frame = +3

Query: 126 NFFDEHTHYTWIFPMKTKSDLFLIFTQFHALVERQFDKKLKFLQSD---EYRVLQPFLTK 296
           +F D+ + +TWI+ +K KS++F  F +F ALVER FD+K+  +Q+D   EY+ L  F  +
Sbjct: 541 SFIDDFSKFTWIYLLKYKSEVFEKFKEFQALVERMFDRKIIAMQTDWGGEYQKLNSFFAQ 600

Query: 297 LGIVFRHSCPHKHTPIEWDVERKHRHIVELGLTLLSKENMPLRFWWDAFARLCFS*IGCP 476
           +GI    SCPH H       ERKH+HI+E+GL+LLS  +MPL+FW +AF    +     P
Sbjct: 601 IGIDHHVSCPHTHQQ-NGSAERKHKHIIEVGLSLLSYASMPLKFWDEAFVAATYLINRIP 659

Query: 477 LMSRQNLT 500
             + QN T
Sbjct: 660 SKTIQNST 667



 Score = 26.2 bits (56), Expect(2) = 2e-22
 Identities = 15/40 (37%), Positives = 22/40 (55%)
 Frame = +2

Query: 11  QTVFPSSVNKAKFLLDVVHTAVWRPAPIRSAEGFGYYVKF 130
           Q  +  S + ++F L++V + VW PAP  S     YYV F
Sbjct: 504 QLPYIRSTSVSQFPLELVFSDVWGPAP-ESVGRNKYYVSF 542


>gb|AAU10682.1| putative polyprotein [Oryza sativa Japonica Group]
          Length = 1210

 Score =  102 bits (254), Expect(2) = 2e-22
 Identities = 52/109 (47%), Positives = 72/109 (66%), Gaps = 3/109 (2%)
 Frame = +3

Query: 126 NFFDEHTHYTWIFPMKTKSDLFLIFTQFHALVERQFDKKLKFLQSD---EYRVLQPFLTK 296
           +F D+ + +TWI+ +K KS++F  F +F  LVER F +K+  +Q+D   EY  L  F TK
Sbjct: 529 SFIDDFSKFTWIYLLKQKSEVFHKFHEFQQLVERIFYRKIIAMQTDWGGEYEKLHDFFTK 588

Query: 297 LGIVFRHSCPHKHTPIEWDVERKHRHIVELGLTLLSKENMPLRFWWDAF 443
           +GI    SCPH H       ERKHRHIVE+GL+LL+  +MPL+FW +AF
Sbjct: 589 IGISHHVSCPHTHQQ-NGSAERKHRHIVEVGLSLLAHASMPLKFWDEAF 636



 Score = 30.0 bits (66), Expect(2) = 2e-22
 Identities = 17/40 (42%), Positives = 22/40 (55%)
 Frame = +2

Query: 11  QTVFPSSVNKAKFLLDVVHTAVWRPAPIRSAEGFGYYVKF 130
           Q  F  S + + F L++V + VW PAP  S  G  YYV F
Sbjct: 492 QLPFLKSTSASNFPLELVFSDVWGPAP-DSVGGRKYYVSF 530


>gb|ABG00000.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
            Japonica Group]
          Length = 2074

 Score =  103 bits (256), Expect(2) = 2e-22
 Identities = 51/109 (46%), Positives = 73/109 (66%), Gaps = 3/109 (2%)
 Frame = +3

Query: 126  NFFDEHTHYTWIFPMKTKSDLFLIFTQFHALVERQFDKKLKFLQSD---EYRVLQPFLTK 296
            +F D+ + +TWI+ +K+K+++FL F +F   VER F++K+  +Q+D   EY  L  F TK
Sbjct: 1496 SFIDDFSKFTWIYLLKSKAEVFLKFQEFQQRVERLFNRKIISMQTDWGGEYEKLHSFFTK 1555

Query: 297  LGIVFRHSCPHKHTPIEWDVERKHRHIVELGLTLLSKENMPLRFWWDAF 443
            +GI    SCP+ H       ERKHRHIVE+GL LLS  +MPL+FW +AF
Sbjct: 1556 IGISHHVSCPYAHQQ-NGSAERKHRHIVEVGLALLSHASMPLKFWDEAF 1603



 Score = 28.9 bits (63), Expect(2) = 2e-22
 Identities = 16/40 (40%), Positives = 22/40 (55%)
 Frame = +2

Query: 11   QTVFPSSVNKAKFLLDVVHTAVWRPAPIRSAEGFGYYVKF 130
            Q  +P S + +   L++V + VW PAP  S  G  YYV F
Sbjct: 1459 QLPYPKSFSVSNNPLELVFSDVWGPAP-TSVGGRKYYVSF 1497


>gb|AAK51235.1|AF287471_1 polyprotein [Arabidopsis thaliana]
          Length = 1453

 Score = 96.7 bits (239), Expect(2) = 2e-22
 Identities = 50/116 (43%), Positives = 71/116 (61%), Gaps = 6/116 (5%)
 Frame = +3

Query: 129 FFDEHTHYTWIFPMKTKSDLFLIFTQFHALVERQFDKKLKFLQSD-----EYRVLQPFLT 293
           F D+++ Y+W +P+K KSD F +F  F  LVE QF+ K+K  QSD        +++  LT
Sbjct: 540 FVDDYSRYSWFYPLKAKSDFFAVFVAFQNLVENQFNTKIKVFQSDGGGEFTSNLMKKHLT 599

Query: 294 KLGIVFRHSCPHKHTPIEWDV-ERKHRHIVELGLTLLSKENMPLRFWWDAFARLCF 458
             GI  R SCP  +TP +  + ERKHRH VELGL+++   + PL+FW +AF    F
Sbjct: 600 DCGIQHRISCP--YTPQQNGIAERKHRHFVELGLSMMFHSHTPLQFWVEAFFTASF 653



 Score = 35.4 bits (80), Expect(2) = 2e-22
 Identities = 17/41 (41%), Positives = 25/41 (60%)
 Frame = +2

Query: 8   SQTVFPSSVNKAKFLLDVVHTAVWRPAPIRSAEGFGYYVKF 130
           S+  F SS ++   LL  +H  +W P+P+ S +GF YYV F
Sbjct: 500 SKLQFFSSNSRELDLLGRIHCDLWGPSPVVSKQGFKYYVVF 540


>emb|CAN79884.1| hypothetical protein VITISV_002539 [Vitis vinifera]
          Length = 1453

 Score = 92.8 bits (229), Expect(3) = 5e-22
 Identities = 49/112 (43%), Positives = 67/112 (59%), Gaps = 6/112 (5%)
 Frame = +3

Query: 129 FFDEHTHYTWIFPMKTKSDLFLIFTQFHALVERQFDKKLKFLQSD-----EYRVLQPFLT 293
           F D+++ +TW++P+K KSD F IF QF  LVE Q+  K+K  QSD          Q  L 
Sbjct: 494 FIDDYSRFTWLYPLKLKSDFFDIFLQFQKLVENQYSTKIKIFQSDGGAEFTSNRFQSHLQ 553

Query: 294 KLGIVFRHSCPHKHTPIE-WDVERKHRHIVELGLTLLSKENMPLRFWWDAFA 446
           + GI  + SCP  +TP +    ERKHRH+ E GL LL   ++P R+W DAF+
Sbjct: 554 QFGIHHQMSCP--YTPSQNGRAERKHRHVTETGLALLFHSHVPPRYWVDAFS 603



 Score = 37.0 bits (84), Expect(3) = 5e-22
 Identities = 15/37 (40%), Positives = 23/37 (62%)
 Frame = +2

Query: 20  FPSSVNKAKFLLDVVHTAVWRPAPIRSAEGFGYYVKF 130
           F S+  ++  +L +VH  +W  AP++S  GF YYV F
Sbjct: 458 FSSNTTRSNVVLGLVHCDIWGLAPVKSNLGFNYYVLF 494



 Score = 21.2 bits (43), Expect(3) = 5e-22
 Identities = 8/17 (47%), Positives = 11/17 (64%)
 Frame = +2

Query: 425 FLVGCLCTAVFLINRLP 475
           + V    TA ++INRLP
Sbjct: 597 YWVDAFSTATYIINRLP 613


>emb|CAN83392.1| hypothetical protein VITISV_041406 [Vitis vinifera]
          Length = 1262

 Score =  100 bits (250), Expect(3) = 5e-22
 Identities = 54/116 (46%), Positives = 74/116 (63%), Gaps = 5/116 (4%)
 Frame = +3

Query: 126 NFFDEHTHYTWIFPMKTKSDLFLIFTQFHALVERQFDKKLKFLQSD---EYRVLQPFLTK 296
           +F D ++ YTW++ +KTKS     F  F A  E QF  KLK  Q+D   E+R L+ +  +
Sbjct: 399 SFXDAYSRYTWVYXLKTKSQTREAFLMFKAQAELQFGCKLKTFQTDWGGEFRSLKTYFEQ 458

Query: 297 LGIVFRHSCPH--KHTPIEWDVERKHRHIVELGLTLLSKENMPLRFWWDAFARLCF 458
            GI+ R SCPH  K   I   +ERKHRHIVELGLTLL++ ++PL++W DAF+   F
Sbjct: 459 NGIIHRLSCPHTSKQNGI---IERKHRHIVELGLTLLAQASLPLKYWPDAFSTAVF 511



 Score = 25.4 bits (54), Expect(3) = 5e-22
 Identities = 11/13 (84%), Positives = 12/13 (92%)
 Frame = +2

Query: 446 TAVFLINRLPSHV 484
           TAVFLINRLP+ V
Sbjct: 508 TAVFLINRLPTEV 520



 Score = 24.6 bits (52), Expect(3) = 5e-22
 Identities = 10/15 (66%), Positives = 11/15 (73%)
 Frame = +2

Query: 86  APIRSAEGFGYYVKF 130
           API S+ GF YYV F
Sbjct: 386 APINSSYGFTYYVSF 400


>emb|CAN76948.1| hypothetical protein VITISV_017167 [Vitis vinifera]
          Length = 467

 Score = 97.8 bits (242), Expect(3) = 8e-22
 Identities = 52/114 (45%), Positives = 67/114 (58%), Gaps = 3/114 (2%)
 Frame = +3

Query: 126 NFFDEHTHYTWIFPMKTKSDLFLIFTQFHALVERQFDKKLKFLQSD---EYRVLQPFLTK 296
           +F D+ T + WIFP+K KS+    F  F A+VERQFD K+K LQSD   EYR +   L  
Sbjct: 174 SFLDDATKFLWIFPLKLKSNACQTFIHFQAIVERQFDTKIKALQSDWDGEYRSITKHLQN 233

Query: 297 LGIVFRHSCPHKHTPIEWDVERKHRHIVELGLTLLSKENMPLRFWWDAFARLCF 458
            GI  R +CP+ H      +ER+H  IVE+GL LL+  N+P  FW D F    F
Sbjct: 234 QGISHRITCPYTHQQAS-AIERRHXQIVEVGLALLAHYNLPKIFWEDVFLTAVF 286



 Score = 32.0 bits (71), Expect(3) = 8e-22
 Identities = 10/26 (38%), Positives = 18/26 (69%)
 Frame = +2

Query: 53  LDVVHTAVWRPAPIRSAEGFGYYVKF 130
           L+++++ +W PAP+ S  G  YY+ F
Sbjct: 150 LELIYSDIWGPAPVLSTSGARYYISF 175



 Score = 20.4 bits (41), Expect(3) = 8e-22
 Identities = 8/13 (61%), Positives = 11/13 (84%)
 Frame = +2

Query: 446 TAVFLINRLPSHV 484
           TAVF+INRL + +
Sbjct: 283 TAVFIINRLXTPI 295