BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Forsythia22_contig00023316
         (813 letters)

Database: ./nr 
           69,698,275 sequences; 24,982,196,650 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_008462083.1| PREDICTED: pentatricopeptide repeat-containi...   233   1e-58
ref|XP_004144616.1| PREDICTED: pentatricopeptide repeat-containi...   231   3e-58
ref|XP_010657440.1| PREDICTED: pentatricopeptide repeat-containi...   229   2e-57
ref|XP_010657439.1| PREDICTED: pentatricopeptide repeat-containi...   229   2e-57
ref|XP_012081524.1| PREDICTED: pentatricopeptide repeat-containi...   224   7e-56
ref|XP_002531691.1| pentatricopeptide repeat-containing protein,...   217   6e-54
ref|XP_008342194.1| PREDICTED: pentatricopeptide repeat-containi...   212   2e-52
ref|XP_011461951.1| PREDICTED: pentatricopeptide repeat-containi...   211   4e-52
ref|XP_009365211.1| PREDICTED: pentatricopeptide repeat-containi...   210   8e-52
ref|XP_012485806.1| PREDICTED: pentatricopeptide repeat-containi...   209   1e-51
ref|XP_008229896.1| PREDICTED: pentatricopeptide repeat-containi...   209   1e-51
ref|XP_008379986.1| PREDICTED: pentatricopeptide repeat-containi...   207   5e-51
gb|KJB10244.1| hypothetical protein B456_001G192200, partial [Go...   205   3e-50
ref|XP_007049307.1| Pentatricopeptide repeat superfamily protein...   204   4e-50
ref|XP_010045870.1| PREDICTED: pentatricopeptide repeat-containi...   204   5e-50
gb|KDO58423.1| hypothetical protein CISIN_1g036237mg [Citrus sin...   203   9e-50
ref|XP_010557708.1| PREDICTED: pentatricopeptide repeat-containi...   203   1e-49
ref|XP_010557707.1| PREDICTED: pentatricopeptide repeat-containi...   203   1e-49
ref|XP_006447757.1| hypothetical protein CICLE_v10014482mg [Citr...   203   1e-49
ref|XP_009102373.1| PREDICTED: pentatricopeptide repeat-containi...   200   8e-49

>ref|XP_008462083.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g48910-like [Cucumis melo]
          Length = 681

 Score =  233 bits (594), Expect = 1e-58
 Identities = 127/257 (49%), Positives = 163/257 (63%), Gaps = 23/257 (8%)
 Frame = -1

Query: 702 TLFHASLQPHLPPDFHHHHSLSQTSNAKEVTQLHAQHIFTSTILSNNIEKPV-------- 547
           TL H SLQP LPP+ H    L      +E  QLHA  I T+++   ++  P+        
Sbjct: 5   TLSH-SLQPFLPPNLHF--PLQNCRTEREANQLHALSIKTASLNHPSVSSPLLALYAHPT 61

Query: 546 ---------------KKTLFSYNTIIKRFLQNHLSQDAVMVFVKLLCCPGLLPDEFTLPC 412
                          K TL S+N +IK +++N  S DA+ +F KLLC    +PD FTLPC
Sbjct: 62  INNLQYAQSLFDWIQKPTLVSWNLLIKCYIENQRSNDAIALFCKLLC--DFMPDSFTLPC 119

Query: 411 AIKACANLGAVREGKMIHGLALKLGFGSGSGVHVESSLVRLYSKCGDINSARKLFDKMIV 232
            +K CA LGA++EGK IHGL LK+GFG      V SSLV +YSKCG+I   RK+FD+M  
Sbjct: 120 VLKGCARLGALQEGKQIHGLVLKIGFGVDK--FVLSSLVSMYSKCGEIELCRKVFDRMED 177

Query: 231 KDLVSWNVLLDGYVKCGGENIEVVLRLFDEMPEKDVFTWTVLIDGLAKSGRVEEAREVFD 52
           KD+VSWN L+DGY +CG   IE+ L +F+EMPEKD F+WT+LIDGL+KSG++E AR VFD
Sbjct: 178 KDVVSWNSLIDGYARCG--EIELALEVFEEMPEKDSFSWTILIDGLSKSGKLEAARYVFD 235

Query: 51  SMLDKNVASWNAMINGY 1
            M  +N  SWNAMINGY
Sbjct: 236 RMPIRNSVSWNAMINGY 252



 Score = 60.5 bits (145), Expect = 1e-06
 Identities = 45/171 (26%), Positives = 89/171 (52%), Gaps = 4/171 (2%)
 Frame = -1

Query: 546 KKTLFSYNTIIKRFLQNHLSQDAVMVFVKLLCCPGLLPDEFTLPCAIKACANLGAVREGK 367
           +++L ++N++I  + +N     A+ +F +++    + P+  T+  A+ A + L ++  G+
Sbjct: 270 ERSLVTWNSMITGYERNKQFTKALKLF-EVMLREDISPNYTTILGAVSAASGLVSLGTGR 328

Query: 366 MIHGLALKLGFGSGSGVHVESSLVRLYSKCGDINSARKLFDKMIVKDLVSWNVLLDGYVK 187
            +H   +K GF +  GV + + L+ +YSKCG + SA ++F  +  K L  W  ++ G   
Sbjct: 329 WVHSYIVKNGFKT-DGV-LGTLLIEMYSKCGSVKSALRVFRFISKKKLGHWTSIIVGLGM 386

Query: 186 CGGENIEVVLRLFDEM----PEKDVFTWTVLIDGLAKSGRVEEAREVFDSM 46
            G   +E  L LFDEM     +    T+  +++  + +G  E+A   F  M
Sbjct: 387 HG--LVEQTLELFDEMCRTGLQPHAITFIGVLNACSHAGFAEDAHRYFKMM 435


>ref|XP_004144616.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g48910-like [Cucumis sativus]
          Length = 681

 Score =  231 bits (590), Expect = 3e-58
 Identities = 128/262 (48%), Positives = 166/262 (63%), Gaps = 23/262 (8%)
 Frame = -1

Query: 717 MLKPATLFHASLQPHLPPDFHHHHSLSQTSNAKEVTQLHAQHIFTSTILSNNIEKPV--- 547
           ML P TL H SLQP LPP+ H    L      +E  QLHA  I T+++   ++   +   
Sbjct: 1   MLSP-TLSH-SLQPFLPPNLHF--PLQNCGTEREANQLHALSIKTASLNHPSVSSRLLAL 56

Query: 546 --------------------KKTLFSYNTIIKRFLQNHLSQDAVMVFVKLLCCPGLLPDE 427
                               + TL S+N +IK +++N  S DA+ +F KLLC    +PD 
Sbjct: 57  YADPRINNLQYAHSLFDWIQEPTLVSWNLLIKCYIENQRSNDAIALFCKLLC--DFVPDS 114

Query: 426 FTLPCAIKACANLGAVREGKMIHGLALKLGFGSGSGVHVESSLVRLYSKCGDINSARKLF 247
           FTLPC +K CA LGA++EGK IHGL LK+GFG      V SSLV +YSKCG+I   RK+F
Sbjct: 115 FTLPCVLKGCARLGALQEGKQIHGLVLKIGFGVDK--FVLSSLVSMYSKCGEIELCRKVF 172

Query: 246 DKMIVKDLVSWNVLLDGYVKCGGENIEVVLRLFDEMPEKDVFTWTVLIDGLAKSGRVEEA 67
           D+M  KD+VSWN L+DGY +CG   IE+ L +F+EMPEKD F+WT+LIDGL+KSG++E A
Sbjct: 173 DRMEDKDVVSWNSLIDGYARCG--EIELALEMFEEMPEKDSFSWTILIDGLSKSGKLEAA 230

Query: 66  REVFDSMLDKNVASWNAMINGY 1
           R+VFD M  +N  SWNAMINGY
Sbjct: 231 RDVFDRMPIRNSVSWNAMINGY 252



 Score = 60.1 bits (144), Expect = 2e-06
 Identities = 44/171 (25%), Positives = 89/171 (52%), Gaps = 4/171 (2%)
 Frame = -1

Query: 546 KKTLFSYNTIIKRFLQNHLSQDAVMVFVKLLCCPGLLPDEFTLPCAIKACANLGAVREGK 367
           +++L ++N++I  + +N     A+ +F +++    + P+  T+  A+ A + + ++  G+
Sbjct: 270 ERSLVTWNSMITGYERNKQFTKALKLF-EVMLREDISPNYTTILGAVSAASGMVSLGTGR 328

Query: 366 MIHGLALKLGFGSGSGVHVESSLVRLYSKCGDINSARKLFDKMIVKDLVSWNVLLDGYVK 187
            +H   +K GF +  GV + + L+ +YSKCG + SA ++F  +  K L  W  ++ G   
Sbjct: 329 WVHSYIVKSGFKT-DGV-LGTLLIEMYSKCGSVKSALRVFRSIPKKKLGHWTSVIVGLGM 386

Query: 186 CGGENIEVVLRLFDEM----PEKDVFTWTVLIDGLAKSGRVEEAREVFDSM 46
            G   +E  L LFDEM     +    T+  +++  + +G  E+A   F  M
Sbjct: 387 HG--LVEQTLELFDEMCRTGLKPHAITFIGVLNACSHAGFAEDAHRYFKMM 435


>ref|XP_010657440.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g48910-like isoform X2 [Vitis vinifera]
          Length = 647

 Score =  229 bits (583), Expect = 2e-57
 Identities = 133/263 (50%), Positives = 173/263 (65%), Gaps = 24/263 (9%)
 Frame = -1

Query: 717 MLKPATLFHASLQPHLPPDFHHHHSLSQTSNA-KEVTQLHA--------QHIFTSTILSN 565
           MLK  T FH SLQ +LP + H   SL QT +A +EV QLHA         H F S+ L  
Sbjct: 1   MLK-LTPFH-SLQQYLPHNLHL--SLFQTCSAPQEVEQLHAFSLKTAIFNHPFVSSRLLA 56

Query: 564 NIEKPV---------------KKTLFSYNTIIKRFLQNHLSQDAVMVFVKLLCCPGLLPD 430
               P                +++L  +NTIIK +++N  S D +++F +L+     LPD
Sbjct: 57  LYSDPKINDLGYARSIFDRIQRRSLIHWNTIIKCYVENQFSHDGIVLFHELV--HEYLPD 114

Query: 429 EFTLPCAIKACANLGAVREGKMIHGLALKLGFGSGSGVHVESSLVRLYSKCGDINSARKL 250
            FTLPC IK CA LG V+EGK IHGLALK+GFGS   V V+ SLV +YSKCG+I+ ARK+
Sbjct: 115 NFTLPCVIKGCARLGVVQEGKQIHGLALKIGFGSD--VFVQGSLVNMYSKCGEIDCARKV 172

Query: 249 FDKMIVKDLVSWNVLLDGYVKCGGENIEVVLRLFDEMPEKDVFTWTVLIDGLAKSGRVEE 70
           FD MI KD+V WN L+DGY +CG   I++ L+LF+EMPE+D F+WTVL+DGL+K G+VE 
Sbjct: 173 FDGMIDKDVVLWNSLIDGYARCG--EIDIALQLFEEMPERDAFSWTVLVDGLSKCGKVES 230

Query: 69  AREVFDSMLDKNVASWNAMINGY 1
           AR++FD M  +N+ SWNAMINGY
Sbjct: 231 ARKLFDQMPCRNLVSWNAMINGY 253



 Score = 74.3 bits (181), Expect = 8e-11
 Identities = 38/86 (44%), Positives = 57/86 (66%)
 Frame = -1

Query: 300 LVRLYSKCGDINSARKLFDKMIVKDLVSWNVLLDGYVKCGGENIEVVLRLFDEMPEKDVF 121
           LV   SKCG + SARKLFD+M  ++LVSWN +++GY+K G  + +  L LF +MP  D+ 
Sbjct: 218 LVDGLSKCGKVESARKLFDQMPCRNLVSWNAMINGYMKSG--DFDSALELFYQMPIWDLV 275

Query: 120 TWTVLIDGLAKSGRVEEAREVFDSML 43
           TW ++I G   +G+  +A ++F  ML
Sbjct: 276 TWNLMIAGYELNGQFMDAVKMFFMML 301



 Score = 63.9 bits (154), Expect = 1e-07
 Identities = 49/184 (26%), Positives = 90/184 (48%), Gaps = 6/184 (3%)
 Frame = -1

Query: 537 LFSYNTIIKRFLQNHLSQDAVMVFVKLLCCPGLLPDEFTLPCAIKACANLGAVREGKMIH 358
           L ++N +I  +  N    DAV +F  +L   G  P   TL   + A + L  + +G+ IH
Sbjct: 274 LVTWNLMIAGYELNGQFMDAVKMFFMMLKL-GSRPSHATLVSVLSAVSGLAVLGKGRWIH 332

Query: 357 GLALKLGFGSGSGVHVESSLVRLYSKCGDINSARKLFDKMIVKDLVSWNVL-----LDGY 193
               K GF    G+ + +SL+ +Y+KCG I SA  +F  +  K +  W  +     + G 
Sbjct: 333 SYMEKNGFEL-DGI-LGTSLIEMYAKCGCIESALTVFRAIQKKKVGHWTAIIVGLGIHGL 390

Query: 192 VKCGGENIEVVLRLFDEMPEKDVFTWTVLIDGLAKSGRVEEAREVFDSM-LDKNVASWNA 16
           V  G +  ++++  +   P  +   +  L+D L ++G +EEA+   ++M +  N   W +
Sbjct: 391 VDDGRQYFDMMMNEYKIEPTLE--HYGCLVDILCRAGHLEEAKNTIENMPISPNKVIWMS 448

Query: 15  MING 4
           ++ G
Sbjct: 449 LLGG 452


>ref|XP_010657439.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g48910-like isoform X1 [Vitis vinifera]
          Length = 682

 Score =  229 bits (583), Expect = 2e-57
 Identities = 133/263 (50%), Positives = 173/263 (65%), Gaps = 24/263 (9%)
 Frame = -1

Query: 717 MLKPATLFHASLQPHLPPDFHHHHSLSQTSNA-KEVTQLHA--------QHIFTSTILSN 565
           MLK  T FH SLQ +LP + H   SL QT +A +EV QLHA         H F S+ L  
Sbjct: 1   MLK-LTPFH-SLQQYLPHNLHL--SLFQTCSAPQEVEQLHAFSLKTAIFNHPFVSSRLLA 56

Query: 564 NIEKPV---------------KKTLFSYNTIIKRFLQNHLSQDAVMVFVKLLCCPGLLPD 430
               P                +++L  +NTIIK +++N  S D +++F +L+     LPD
Sbjct: 57  LYSDPKINDLGYARSIFDRIQRRSLIHWNTIIKCYVENQFSHDGIVLFHELV--HEYLPD 114

Query: 429 EFTLPCAIKACANLGAVREGKMIHGLALKLGFGSGSGVHVESSLVRLYSKCGDINSARKL 250
            FTLPC IK CA LG V+EGK IHGLALK+GFGS   V V+ SLV +YSKCG+I+ ARK+
Sbjct: 115 NFTLPCVIKGCARLGVVQEGKQIHGLALKIGFGSD--VFVQGSLVNMYSKCGEIDCARKV 172

Query: 249 FDKMIVKDLVSWNVLLDGYVKCGGENIEVVLRLFDEMPEKDVFTWTVLIDGLAKSGRVEE 70
           FD MI KD+V WN L+DGY +CG   I++ L+LF+EMPE+D F+WTVL+DGL+K G+VE 
Sbjct: 173 FDGMIDKDVVLWNSLIDGYARCG--EIDIALQLFEEMPERDAFSWTVLVDGLSKCGKVES 230

Query: 69  AREVFDSMLDKNVASWNAMINGY 1
           AR++FD M  +N+ SWNAMINGY
Sbjct: 231 ARKLFDQMPCRNLVSWNAMINGY 253



 Score = 74.3 bits (181), Expect = 8e-11
 Identities = 38/86 (44%), Positives = 57/86 (66%)
 Frame = -1

Query: 300 LVRLYSKCGDINSARKLFDKMIVKDLVSWNVLLDGYVKCGGENIEVVLRLFDEMPEKDVF 121
           LV   SKCG + SARKLFD+M  ++LVSWN +++GY+K G  + +  L LF +MP  D+ 
Sbjct: 218 LVDGLSKCGKVESARKLFDQMPCRNLVSWNAMINGYMKSG--DFDSALELFYQMPIWDLV 275

Query: 120 TWTVLIDGLAKSGRVEEAREVFDSML 43
           TW ++I G   +G+  +A ++F  ML
Sbjct: 276 TWNLMIAGYELNGQFMDAVKMFFMML 301



 Score = 58.2 bits (139), Expect = 6e-06
 Identities = 49/171 (28%), Positives = 83/171 (48%), Gaps = 4/171 (2%)
 Frame = -1

Query: 537 LFSYNTIIKRFLQNHLSQDAVMVFVKLLCCPGLLPDEFTLPCAIKACANLGAVREGKMIH 358
           L ++N +I  +  N    DAV +F  +L   G  P   TL   + A + L  + +G+ IH
Sbjct: 274 LVTWNLMIAGYELNGQFMDAVKMFFMMLKL-GSRPSHATLVSVLSAVSGLAVLGKGRWIH 332

Query: 357 GLALKLGFGSGSGVHVESSLVRLYSKCGDINSARKLFDKMIVKDLVSWNVLLDGYVKCGG 178
               K GF    G+ + +SL+ +Y+KCG I SA  +F  +  K +  W  ++ G    G 
Sbjct: 333 SYMEKNGFEL-DGI-LGTSLIEMYAKCGCIESALTVFRAIQKKKVGHWTAIIVGLGIHGM 390

Query: 177 ENIEVVLRLFDEMPEKDVFTWTVLIDGLAK----SGRVEEAREVFDSMLDK 37
            N    L LF EM +  +    ++  G+      +G V++ R+ FD M+++
Sbjct: 391 AN--HALALFLEMCKTGLKPNAIIFIGVLNACNHAGLVDDGRQYFDMMMNE 439


>ref|XP_012081524.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g48910-like [Jatropha curcas]
          Length = 674

 Score =  224 bits (570), Expect = 7e-56
 Identities = 124/247 (50%), Positives = 161/247 (65%), Gaps = 23/247 (9%)
 Frame = -1

Query: 672 LPPDFHHHHSLSQTSNAKEVTQLHAQHIFTST---------ILS-------NNIEKPV-- 547
           +P   HH + L  +   KE  QLHA  + T+T         ILS       NN+E  +  
Sbjct: 5   IPNPSHHFYLLQTSKTHKETQQLHALSLKTNTFAHPSISSRILSLYADPKVNNLEYAISI 64

Query: 546 -----KKTLFSYNTIIKRFLQNHLSQDAVMVFVKLLCCPGLLPDEFTLPCAIKACANLGA 382
                + TL  +N IIK +++N LS DA+ +F +L+      PD FTLPC IK CA L A
Sbjct: 65  FSKIQQPTLVLFNIIIKCYIENQLSHDAISLFSELI--HDFKPDCFTLPCVIKGCARLHA 122

Query: 381 VREGKMIHGLALKLGFGSGSGVHVESSLVRLYSKCGDINSARKLFDKMIVKDLVSWNVLL 202
           ++EGK IHGL LKLGFG      V SSLV +Y+KC +I+SA K+F  M  KDLVSWN LL
Sbjct: 123 IKEGKQIHGLVLKLGFGFDK--FVLSSLVNMYAKCEEIDSAEKVFVSMDYKDLVSWNSLL 180

Query: 201 DGYVKCGGENIEVVLRLFDEMPEKDVFTWTVLIDGLAKSGRVEEAREVFDSMLDKNVASW 22
           DGYVKCG   +E+ ++LF+EMPE+D+F+WTVLIDG +KSG+V+ ARE+FD M D+N+ SW
Sbjct: 181 DGYVKCG--QVELAMKLFEEMPERDLFSWTVLIDGFSKSGKVDVARELFDMMPDRNLVSW 238

Query: 21  NAMINGY 1
           NAMINGY
Sbjct: 239 NAMINGY 245



 Score = 67.0 bits (162), Expect = 1e-08
 Identities = 53/174 (30%), Positives = 87/174 (50%), Gaps = 4/174 (2%)
 Frame = -1

Query: 546 KKTLFSYNTIIKRFLQNHLSQDAVMVFVKLLCCPGLLPDEFTLPCAIKACANLGAVREGK 367
           KK L S+N++I  +  N   ++A+ +FV +L    + P   TL     A + + ++ +GK
Sbjct: 263 KKNLISWNSMIAGYDLNGRYREALQLFVHMLEGDSM-PSHATLVSVFSAVSGVASLSKGK 321

Query: 366 MIHGLALKLGFGSGSGVHVESSLVRLYSKCGDINSARKLFDKMIVKDLVSWNVLLDGYVK 187
            IH   +K GF    GV + +SL+ +YSKCG I SA  +F  +  K L  W  +L G   
Sbjct: 322 WIHSFMVKNGFEL-DGV-LATSLIDMYSKCGSIESALTVFQLIRRKKLGHWTAILVGLGM 379

Query: 186 CGGENIEVVLRLFDEMPEKDVFTWTVLIDGL----AKSGRVEEAREVFDSMLDK 37
            G    E    LF+EM    +    ++  GL    + +G V++ R+ F  M ++
Sbjct: 380 HG--MAEDAQELFNEMRRIGMKPHAIIFIGLLNACSHAGLVDDGRQYFKMMTNE 431


>ref|XP_002531691.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223528667|gb|EEF30682.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 434

 Score =  217 bits (553), Expect = 6e-54
 Identities = 125/241 (51%), Positives = 157/241 (65%), Gaps = 24/241 (9%)
 Frame = -1

Query: 651 HHSLSQTSNA-KEVTQLHAQHIFTST---------ILS-------NNIE-------KPVK 544
           H SL +TS   KE  QLHA  + T+T         +LS       NN+E       K  +
Sbjct: 11  HFSLLKTSKTDKETKQLHALSVKTNTFSHPSISSCLLSLYAEPKINNLEYVLSIFNKIQE 70

Query: 543 KTLFSYNTIIKRFLQNHLSQDAVMVFVKLLCCPGLLPDEFTLPCAIKACANLGAVREGKM 364
             L  YN +IK ++QN LS DA+ +F +LL      PD FTLPC IK CA L A +EGK 
Sbjct: 71  PALVLYNILIKCYIQNQLSHDAITLFSQLL--HEFNPDGFTLPCVIKGCARLHATKEGKQ 128

Query: 363 IHGLALKLGFGSGSGVHVESSLVRLYSKCGDINSARKLFDKMIVKDLVSWNVLLDGYVKC 184
           IHGL LKLGFG      V SSLV +YSKC DI+SA+K+F  M  KDLVSWN L+DGYVKC
Sbjct: 129 IHGLVLKLGFGLNK--FVSSSLVNMYSKCKDIDSAKKVFLSMDDKDLVSWNSLIDGYVKC 186

Query: 183 GGENIEVVLRLFDEMPEKDVFTWTVLIDGLAKSGRVEEAREVFDSMLDKNVASWNAMING 4
           G   +E+ ++LF+EMPE+D+F+WTVLIDG +K G+V+ ARE+FD M  +N+ SWNAMING
Sbjct: 187 G--QVELGMKLFEEMPERDLFSWTVLIDGFSKCGKVDVARELFDKMPSRNLVSWNAMING 244

Query: 3   Y 1
           Y
Sbjct: 245 Y 245



 Score = 79.0 bits (193), Expect = 3e-12
 Identities = 36/89 (40%), Positives = 63/89 (70%)
 Frame = -1

Query: 300 LVRLYSKCGDINSARKLFDKMIVKDLVSWNVLLDGYVKCGGENIEVVLRLFDEMPEKDVF 121
           L+  +SKCG ++ AR+LFDKM  ++LVSWN +++GY+K G  +  +   LFD+MPEK++ 
Sbjct: 210 LIDGFSKCGKVDVARELFDKMPSRNLVSWNAMINGYMKAG--DFVLASELFDKMPEKNLI 267

Query: 120 TWTVLIDGLAKSGRVEEAREVFDSMLDKN 34
           +W  ++ G   + R +EA ++F +ML+++
Sbjct: 268 SWNSMVAGYDLNERFKEALDLFLTMLERD 296



 Score = 67.8 bits (164), Expect = 8e-09
 Identities = 51/181 (28%), Positives = 89/181 (49%), Gaps = 4/181 (2%)
 Frame = -1

Query: 576 ILSNNIEKPVKKTLFSYNTIIKRFLQNHLSQDAVMVFVKLLCCPGLLPDEFTLPCAIKAC 397
           + S   +K  +K L S+N+++  +  N   ++A+ +F+ +L      P+  TL     A 
Sbjct: 253 LASELFDKMPEKNLISWNSMVAGYDLNERFKEALDLFLTMLE-RDFTPNHATLVSTFSAV 311

Query: 396 ANLGAVREGKMIHGLALKLGFGSGSGVHVESSLVRLYSKCGDINSARKLFDKMIVKDLVS 217
           + L ++  GK +H   +K GF    GV + +SL+ +YSKCG+I SA  +F  +  K L  
Sbjct: 312 SGLASLSTGKWMHSYMVKNGFQL-DGV-LATSLINMYSKCGNIESALSVFQLITKKKLGH 369

Query: 216 WNVLLDGYVKCGGENIEVVLRLFDEM----PEKDVFTWTVLIDGLAKSGRVEEAREVFDS 49
           W  ++ G    G    +  L  F EM          T+  +++  + +G VE+ R+ FD 
Sbjct: 370 WTAIIVGLGMHG--MADNALEFFHEMCRTGMRPHAITFIGVLNACSHAGLVEDGRKYFDM 427

Query: 48  M 46
           M
Sbjct: 428 M 428


>ref|XP_008342194.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
           chloroplastic-like [Malus domestica]
          Length = 686

 Score =  212 bits (540), Expect = 2e-52
 Identities = 119/251 (47%), Positives = 158/251 (62%), Gaps = 24/251 (9%)
 Frame = -1

Query: 681 QPHLPPDFHHHHSLSQTSNA-KEVTQLHAQHIFTSTILS----------------NNIE- 556
           QP L P   +  SL QT    +E  Q HA  + T T                   NN+E 
Sbjct: 13  QPFLSPQTLNPFSLLQTCKTLQEAEQHHALFLKTGTFSHPSVASHFLSLYADPKINNLEY 72

Query: 555 ------KPVKKTLFSYNTIIKRFLQNHLSQDAVMVFVKLLCCPGLLPDEFTLPCAIKACA 394
                 +  + TL S+N +IK ++ N  S DA+++F +L+    L+PD FT+PC IK CA
Sbjct: 73  ARSVFDQIDQPTLVSWNILIKGYVGNQRSHDAIVLFYELV--HELVPDNFTVPCVIKGCA 130

Query: 393 NLGAVREGKMIHGLALKLGFGSGSGVHVESSLVRLYSKCGDINSARKLFDKMIVKDLVSW 214
            L A+ EGK IHGL LK+G G      V+SSLV LYSKCG+I  ARK+FD+M  +DLV+W
Sbjct: 131 RLNAIEEGKQIHGLVLKIGLGLDK--FVQSSLVNLYSKCGEIGLARKVFDQMRDRDLVTW 188

Query: 213 NVLLDGYVKCGGENIEVVLRLFDEMPEKDVFTWTVLIDGLAKSGRVEEAREVFDSMLDKN 34
           N L+DGY +CG   +EV + LFD+M E+D+F+WTVL+DGL+K G+VE AREVFD M ++N
Sbjct: 189 NSLVDGYARCG--EVEVAMELFDQMQERDLFSWTVLVDGLSKCGKVEMAREVFDRMPNRN 246

Query: 33  VASWNAMINGY 1
           + SWNAMINGY
Sbjct: 247 LVSWNAMINGY 257



 Score = 60.1 bits (144), Expect = 2e-06
 Identities = 49/170 (28%), Positives = 87/170 (51%), Gaps = 4/170 (2%)
 Frame = -1

Query: 543 KTLFSYNTIIKRFLQNHLSQDAVMVFVKLLCCPGLLPDEFTLPCAIKACANLGAVREGKM 364
           K + ++N++I  +  N    +A+ +F ++L    ++P   TL  A+ A + L  + +G+ 
Sbjct: 276 KDVITWNSMIAGYEFNGRFMEALELFQEILK-EDIMPSHATLVSALSAVSGLAILSKGRW 334

Query: 363 IHGLALKLGFGSGSGVHVESSLVRLYSKCGDINSARKLFDKMIVKDLVSWNVLLDGYVKC 184
           IH   +K GF    GV + +SL+ +YSKCG I +A  +F  +  K L  W  ++ G    
Sbjct: 335 IHSFMVKNGFEL-DGV-LGTSLIDMYSKCGSIENAVAVFRAIHRKKLGHWTSIIVGLGMH 392

Query: 183 GGENIEVVLRLFDEMPEKDV----FTWTVLIDGLAKSGRVEEAREVFDSM 46
           G    + VL LF EM +  +     T+  +++  + SG V+  R  F+ M
Sbjct: 393 G--MADQVLELFLEMRKNGIQPHAITFIGVLNACSHSGLVDLGRYYFNLM 440


>ref|XP_011461951.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g08070-like, partial [Fragaria vesca subsp. vesca]
          Length = 679

 Score =  211 bits (537), Expect = 4e-52
 Identities = 116/249 (46%), Positives = 150/249 (60%), Gaps = 23/249 (9%)
 Frame = -1

Query: 678 PHLPPDFHHHHSLSQTSNAKEVTQLHAQHIFTSTILSNNIEKPV---------------- 547
           P LPP       L      KE TQLHA  + T    + +I   +                
Sbjct: 8   PPLPPQSLSFSILQSCQTLKEATQLHALSLKTGAFTNPSIASRLLSLYANPSINHLPYAL 67

Query: 546 -------KKTLFSYNTIIKRFLQNHLSQDAVMVFVKLLCCPGLLPDEFTLPCAIKACANL 388
                     L S+N ++K  L NH S DA+++F +LL      PD FTLP  +KACA L
Sbjct: 68  SVFSHLPNPNLISFNLLLKSHLLNHRSHDALLLFFRLLHHHA--PDNFTLPSVVKACARL 125

Query: 387 GAVREGKMIHGLALKLGFGSGSGVHVESSLVRLYSKCGDINSARKLFDKMIVKDLVSWNV 208
           GAV EGK +H LALK+G G    ++V+SSLV LYSKCG I  ARK+FD+M  +DLV+WN 
Sbjct: 126 GAVAEGKQVHALALKIGLGLE--MYVQSSLVSLYSKCGAIECARKVFDEMRERDLVAWNS 183

Query: 207 LLDGYVKCGGENIEVVLRLFDEMPEKDVFTWTVLIDGLAKSGRVEEAREVFDSMLDKNVA 28
           L+DGY +CG   ++V + LF+EM E+D F+WTVL+DGL+K G V++AREVF+ M  KNV 
Sbjct: 184 LIDGYARCG--RVDVAVELFEEMEERDEFSWTVLVDGLSKCGHVKKAREVFERMPSKNVV 241

Query: 27  SWNAMINGY 1
           SWNAMINGY
Sbjct: 242 SWNAMINGY 250



 Score = 58.9 bits (141), Expect = 4e-06
 Identities = 48/170 (28%), Positives = 90/170 (52%), Gaps = 4/170 (2%)
 Frame = -1

Query: 543 KTLFSYNTIIKRFLQNHLSQDAVMVFVKLLCCPGLLPDEFTLPCAIKACANLGAVREGKM 364
           + + S+N++I  +  N    +A+ +F ++L    + P   TL   + A + L A+ +G++
Sbjct: 269 RDVISWNSMISGYEFNGRFGEALELFREVLE-EDVRPTPATLVSVLSAVSGLAALSKGRI 327

Query: 363 IHGLALKLGFGSGSGVHVESSLVRLYSKCGDINSARKLFDKMIVKDLVSWNVLLDGYVKC 184
           +H + +K GF    GV + +SL+ +YSKCG I+SA  +F+ +  K +  W  ++ G    
Sbjct: 328 VHSVMVKHGFEL-EGV-LGTSLIDMYSKCGSIDSAMAVFEGIQRKKVGHWTAIIVGLGMH 385

Query: 183 GGENIEVVLRLFDEM----PEKDVFTWTVLIDGLAKSGRVEEAREVFDSM 46
           G    + VL+LF EM     E    T+  +++  + +G V+  R  F+ M
Sbjct: 386 G--MADQVLQLFLEMRTNGMEPHGITFIGILNACSHAGLVDLGRYYFNMM 433


>ref|XP_009365211.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
           chloroplastic-like [Pyrus x bretschneideri]
          Length = 686

 Score =  210 bits (535), Expect = 8e-52
 Identities = 106/189 (56%), Positives = 139/189 (73%)
 Frame = -1

Query: 567 NNIEKPVKKTLFSYNTIIKRFLQNHLSQDAVMVFVKLLCCPGLLPDEFTLPCAIKACANL 388
           + IE+P   TL S+N +IK ++ N  S DA+++F +L+    L+PD FT+PC IK CA L
Sbjct: 78  DQIEQP---TLVSWNVLIKCYVGNQRSHDAIVLFYELV--HELVPDNFTVPCVIKGCARL 132

Query: 387 GAVREGKMIHGLALKLGFGSGSGVHVESSLVRLYSKCGDINSARKLFDKMIVKDLVSWNV 208
            A+ EGK IHGL LK+G G      V+SSLV LYSKCG+I  ARK+FD+M  +DLV+WN 
Sbjct: 133 NAIEEGKQIHGLVLKIGLGLDK--FVQSSLVSLYSKCGEIGLARKVFDEMRDRDLVTWNS 190

Query: 207 LLDGYVKCGGENIEVVLRLFDEMPEKDVFTWTVLIDGLAKSGRVEEAREVFDSMLDKNVA 28
           L+DGY +CG   +EV + LFDEM E+D+F+WTVL+DGL+K G+VE AREVFD M ++N  
Sbjct: 191 LVDGYARCG--EVEVAMELFDEMQERDLFSWTVLVDGLSKCGKVEMAREVFDRMPNRNSV 248

Query: 27  SWNAMINGY 1
           SWNAMINGY
Sbjct: 249 SWNAMINGY 257


>ref|XP_012485806.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g08070-like [Gossypium raimondii]
           gi|763742755|gb|KJB10254.1| hypothetical protein
           B456_001G191900 [Gossypium raimondii]
          Length = 682

 Score =  209 bits (533), Expect = 1e-51
 Identities = 118/245 (48%), Positives = 154/245 (62%), Gaps = 23/245 (9%)
 Frame = -1

Query: 666 PDFHHHHSLSQTSNAKEVTQLHAQHIFT---------STILS-------NNI-------E 556
           PD  H   L  +   +E  QLHA  + T         S +LS       NN+       +
Sbjct: 15  PDALHFSLLKSSKTHQETQQLHAFSLKTAVFSHPSLSSRLLSLYADPNINNLRYARSVFD 74

Query: 555 KPVKKTLFSYNTIIKRFLQNHLSQDAVMVFVKLLCCPGLLPDEFTLPCAIKACANLGAVR 376
           +    +L  +N I+K ++QN  S +A+ +FV LL      PDEFT PC IKACA L A++
Sbjct: 75  RIQHPSLVLWNIILKCYIQNQQSHEAISLFVLLL--GHFPPDEFTFPCVIKACAKLTALK 132

Query: 375 EGKMIHGLALKLGFGSGSGVHVESSLVRLYSKCGDINSARKLFDKMIVKDLVSWNVLLDG 196
           EGK IHGL LKLGFG      V++SLV LYSKCG+I S   +FD+M  KDLVSWN LLDG
Sbjct: 133 EGKQIHGLVLKLGFGLDK--FVQASLVNLYSKCGEIGSGYTVFDQMDDKDLVSWNSLLDG 190

Query: 195 YVKCGGENIEVVLRLFDEMPEKDVFTWTVLIDGLAKSGRVEEAREVFDSMLDKNVASWNA 16
           Y +CG   ++  +++FDEMPEKD F+WTVLIDGLAK G VE AR++F++M ++N+ SWN 
Sbjct: 191 YARCG--EVKAAMKVFDEMPEKDCFSWTVLIDGLAKCGEVETARKIFENMPNRNLVSWNT 248

Query: 15  MINGY 1
           MINGY
Sbjct: 249 MINGY 253


>ref|XP_008229896.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
           chloroplastic-like [Prunus mume]
          Length = 684

 Score =  209 bits (533), Expect = 1e-51
 Identities = 104/189 (55%), Positives = 139/189 (73%)
 Frame = -1

Query: 567 NNIEKPVKKTLFSYNTIIKRFLQNHLSQDAVMVFVKLLCCPGLLPDEFTLPCAIKACANL 388
           + IE+P   TL S+N +IK ++ N  S DA+++F +LL    L+PD FT+PC +K CA L
Sbjct: 76  DQIEEP---TLVSWNVLIKCYVGNQRSHDAIILFYELL--HELVPDNFTVPCVMKGCARL 130

Query: 387 GAVREGKMIHGLALKLGFGSGSGVHVESSLVRLYSKCGDINSARKLFDKMIVKDLVSWNV 208
            A+ EGK IHGL LK+G G      V+SSLV LYSKCG+I  ARK+FD+M+ +DLV+WN 
Sbjct: 131 NAIGEGKQIHGLVLKIGLGLDK--FVQSSLVSLYSKCGEIGLARKVFDQMLDRDLVTWNS 188

Query: 207 LLDGYVKCGGENIEVVLRLFDEMPEKDVFTWTVLIDGLAKSGRVEEAREVFDSMLDKNVA 28
           L+DGY +CG   +EV + LFD+M E+D F+WTVL+DGL+K G+VE ARE+FD M  +N+ 
Sbjct: 189 LIDGYARCG--EVEVAMELFDQMQERDSFSWTVLVDGLSKCGKVEMAREIFDRMPHRNLV 246

Query: 27  SWNAMINGY 1
           SWNAMINGY
Sbjct: 247 SWNAMINGY 255



 Score = 61.2 bits (147), Expect = 7e-07
 Identities = 45/170 (26%), Positives = 87/170 (51%), Gaps = 2/170 (1%)
 Frame = -1

Query: 543 KTLFSYNTIIKRFLQNHLSQDAVMVFVKLLCCPGLLPDEFTLPCAIKACANLGAVREGKM 364
           + + ++N++I  +  N    +A+ +F ++L    ++P   TL  A+ A + L  + +G+ 
Sbjct: 274 RDIITWNSMIAGYEFNGQFMEALELFQEILE-EDIMPSHATLVSALSAVSGLATLSKGRW 332

Query: 363 IHGLALKLGFGSGSGVHVESSLVRLYSKCGDINSARKLFDKMIVKDLVSWNVLLDGYVKC 184
           IH   +K GF    GV + +SL+ +YSKCG I SA  +F  +  K L  W  ++ G    
Sbjct: 333 IHSFMVKHGFDL-DGV-LGTSLIEMYSKCGSIESALAVFRAIDRKKLGHWTAIIVGLGMH 390

Query: 183 G--GENIEVVLRLFDEMPEKDVFTWTVLIDGLAKSGRVEEAREVFDSMLD 40
           G   + +EV L +       +  T+  +++  + +G V+  R  F+ M++
Sbjct: 391 GMADQVLEVFLEMRKNGMHPNGITFVGVLNACSHAGLVDLGRYYFNLMIN 440


>ref|XP_008379986.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
           chloroplastic-like [Malus domestica]
          Length = 686

 Score =  207 bits (528), Expect = 5e-51
 Identities = 104/189 (55%), Positives = 139/189 (73%)
 Frame = -1

Query: 567 NNIEKPVKKTLFSYNTIIKRFLQNHLSQDAVMVFVKLLCCPGLLPDEFTLPCAIKACANL 388
           + IE+P   +L S+N +IK ++ N  S DA+++F +L+    L+PD FT+PC IK CA L
Sbjct: 78  DQIEQP---SLVSWNVLIKCYVGNQRSHDAIVLFYELV--HELVPDHFTVPCVIKGCARL 132

Query: 387 GAVREGKMIHGLALKLGFGSGSGVHVESSLVRLYSKCGDINSARKLFDKMIVKDLVSWNV 208
            A+ EGK IHGL LK+G G      V+SSLV LYSKCG+I  ARK+FD+M  +DLV+WN 
Sbjct: 133 NAIEEGKQIHGLVLKIGLGLDK--FVQSSLVSLYSKCGEIGLARKVFDEMRDRDLVTWNS 190

Query: 207 LLDGYVKCGGENIEVVLRLFDEMPEKDVFTWTVLIDGLAKSGRVEEAREVFDSMLDKNVA 28
           L+DGY +CG   +EV + LFD+M E+D+F+WTVL+DGL+K G+VE AREVFD M ++N  
Sbjct: 191 LVDGYARCG--EVEVAMELFDQMQERDLFSWTVLVDGLSKCGKVEMAREVFDRMPNRNSV 248

Query: 27  SWNAMINGY 1
           SWNAMINGY
Sbjct: 249 SWNAMINGY 257


>gb|KJB10244.1| hypothetical protein B456_001G192200, partial [Gossypium raimondii]
          Length = 453

 Score =  205 bits (521), Expect = 3e-50
 Identities = 117/245 (47%), Positives = 152/245 (62%), Gaps = 23/245 (9%)
 Frame = -1

Query: 666 PDFHHHHSLSQTSNAKEVTQLHAQHIFT---------STILS-------NNI-------E 556
           PD  H   L  +   +E  QLHA  + T         S +LS       NN+       +
Sbjct: 15  PDALHFSLLKSSKTHQETQQLHAFSLKTGVFSHPSLSSRLLSLYADPNINNLRYARSVFD 74

Query: 555 KPVKKTLFSYNTIIKRFLQNHLSQDAVMVFVKLLCCPGLLPDEFTLPCAIKACANLGAVR 376
           +    +L  +N I+K ++QN  S +A+ +FV LL      PDEFT PC IKACA L A++
Sbjct: 75  RIQHPSLVLWNIILKCYIQNQQSHEAISLFVLLL--GHFPPDEFTFPCVIKACAKLTALK 132

Query: 375 EGKMIHGLALKLGFGSGSGVHVESSLVRLYSKCGDINSARKLFDKMIVKDLVSWNVLLDG 196
           EGK IHGL L LGFG      V++SLV LYSKCG I SA  +FD+M  KDLVSWN LLDG
Sbjct: 133 EGKQIHGLVLNLGFGLDK--FVQASLVNLYSKCGKIGSAYAVFDQMDEKDLVSWNSLLDG 190

Query: 195 YVKCGGENIEVVLRLFDEMPEKDVFTWTVLIDGLAKSGRVEEAREVFDSMLDKNVASWNA 16
           Y +CG   ++  +++FDEMPEKD F+WTVLI GLAK G VE AR++F++M ++N+ SWN 
Sbjct: 191 YARCG--EVKAAMKVFDEMPEKDCFSWTVLIYGLAKCGEVETARKIFENMPNRNLVSWNT 248

Query: 15  MINGY 1
           MINGY
Sbjct: 249 MINGY 253



 Score = 77.8 bits (190), Expect = 8e-12
 Identities = 35/92 (38%), Positives = 60/92 (65%)
 Frame = -1

Query: 285 SKCGDINSARKLFDKMIVKDLVSWNVLLDGYVKCGGENIEVVLRLFDEMPEKDVFTWTVL 106
           +KCG++ +ARK+F+ M  ++LVSWN +++GY+K G  N     +LFD+MP +++ TW  +
Sbjct: 223 AKCGEVETARKIFENMPNRNLVSWNTMINGYIKAGDTNS--ACKLFDQMPTRNLITWNSI 280

Query: 105 IDGLAKSGRVEEAREVFDSMLDKNVASWNAMI 10
           I G   + R  EA E+F+ ML++     +A +
Sbjct: 281 IGGFKLNLRFLEALEMFERMLEEEFRPTHATL 312


>ref|XP_007049307.1| Pentatricopeptide repeat superfamily protein, putative [Theobroma
           cacao] gi|508701568|gb|EOX93464.1| Pentatricopeptide
           repeat superfamily protein, putative [Theobroma cacao]
          Length = 682

 Score =  204 bits (520), Expect = 4e-50
 Identities = 103/180 (57%), Positives = 127/180 (70%)
 Frame = -1

Query: 540 TLFSYNTIIKRFLQNHLSQDAVMVFVKLLCCPGLLPDEFTLPCAIKACANLGAVREGKMI 361
           TL  +N IIK +++N  S +A+ +F +LL      PDEFT PC IK CA L AV EGK I
Sbjct: 80  TLILWNIIIKCYVENQQSHEAIFLFAQLL--HHFPPDEFTFPCVIKGCAKLNAVNEGKQI 137

Query: 360 HGLALKLGFGSGSGVHVESSLVRLYSKCGDINSARKLFDKMIVKDLVSWNVLLDGYVKCG 181
           HGL LKLGFG       + SLV LYSKCG+I SA K+FD M  KDLV WN LLDGY +CG
Sbjct: 138 HGLVLKLGFGLDK--FTQGSLVNLYSKCGEIASAHKVFDVMGEKDLVLWNSLLDGYARCG 195

Query: 180 GENIEVVLRLFDEMPEKDVFTWTVLIDGLAKSGRVEEAREVFDSMLDKNVASWNAMINGY 1
              ++V ++ F+EMPE+D F+WTVLIDGLAK G VE ARE+F+ M ++N+ SWN MINGY
Sbjct: 196 --EVKVAMKAFEEMPERDCFSWTVLIDGLAKCGEVETAREIFEKMPNRNLVSWNTMINGY 253



 Score = 73.2 bits (178), Expect = 2e-10
 Identities = 33/81 (40%), Positives = 56/81 (69%)
 Frame = -1

Query: 285 SKCGDINSARKLFDKMIVKDLVSWNVLLDGYVKCGGENIEVVLRLFDEMPEKDVFTWTVL 106
           +KCG++ +AR++F+KM  ++LVSWN +++GY+K G  +I    +LF+ MP++++ TW  +
Sbjct: 223 AKCGEVETAREIFEKMPNRNLVSWNTMINGYMKAG--DINSACKLFNRMPKRNLITWNSI 280

Query: 105 IDGLAKSGRVEEAREVFDSML 43
           I GL  +    EA E+F  ML
Sbjct: 281 IGGLELNLHFVEALEMFKRML 301


>ref|XP_010045870.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
           chloroplastic-like [Eucalyptus grandis]
           gi|629124266|gb|KCW88691.1| hypothetical protein
           EUGRSUZ_A01046 [Eucalyptus grandis]
          Length = 688

 Score =  204 bits (519), Expect = 5e-50
 Identities = 111/209 (53%), Positives = 142/209 (67%), Gaps = 1/209 (0%)
 Frame = -1

Query: 624 AKEVTQL-HAQHIFTSTILSNNIEKPVKKTLFSYNTIIKRFLQNHLSQDAVMVFVKLLCC 448
           A E+  L HA+ +F      + I  P    L S+N IIK  ++N  S DA+ +F +L+  
Sbjct: 66  APEINDLRHARSVF------DRIPHP---PLPSWNVIIKCCVENRHSHDALCLFRELV-- 114

Query: 447 PGLLPDEFTLPCAIKACANLGAVREGKMIHGLALKLGFGSGSGVHVESSLVRLYSKCGDI 268
               PD FTLPC IK CA L AV EGK +HGLALK+G GS     VESSLV +YSKCG I
Sbjct: 115 GECTPDGFTLPCVIKGCARLSAVEEGKQVHGLALKIGLGSDK--FVESSLVSMYSKCGSI 172

Query: 267 NSARKLFDKMIVKDLVSWNVLLDGYVKCGGENIEVVLRLFDEMPEKDVFTWTVLIDGLAK 88
            SARK+FD M  KDLV WN L+DGY +CG   IE  L +F+EMPE+D F+WTVL+DGL+K
Sbjct: 173 ASARKVFDGMDDKDLVCWNALIDGYARCG--EIERALEVFNEMPERDAFSWTVLVDGLSK 230

Query: 87  SGRVEEAREVFDSMLDKNVASWNAMINGY 1
           SG++E ARE+F+ M  +++ SWNAM+NGY
Sbjct: 231 SGKIEAAREIFEKMPSRSLVSWNAMVNGY 259



 Score = 74.7 bits (182), Expect = 6e-11
 Identities = 37/86 (43%), Positives = 58/86 (67%)
 Frame = -1

Query: 300 LVRLYSKCGDINSARKLFDKMIVKDLVSWNVLLDGYVKCGGENIEVVLRLFDEMPEKDVF 121
           LV   SK G I +AR++F+KM  + LVSWN +++GY+K G  N     +LF++MP +D+ 
Sbjct: 224 LVDGLSKSGKIEAAREIFEKMPSRSLVSWNAMVNGYMKSGDFNS--ARKLFEDMPTRDLI 281

Query: 120 TWTVLIDGLAKSGRVEEAREVFDSML 43
           TW  +I G   +GR +EA ++F+S+L
Sbjct: 282 TWNSMIAGYDLNGRFKEALDMFNSLL 307



 Score = 62.8 bits (151), Expect = 3e-07
 Identities = 50/170 (29%), Positives = 83/170 (48%), Gaps = 4/170 (2%)
 Frame = -1

Query: 543 KTLFSYNTIIKRFLQNHLSQDAVMVFVKLLCCPGLLPDEFTLPCAIKACANLGAVREGKM 364
           + L ++N++I  +  N   ++A+ +F  LL   G +P+  TL CA+ + + L  +  G  
Sbjct: 278 RDLITWNSMIAGYDLNGRFKEALDMFNSLLK-EGFVPNHATLVCALSSVSGLATLSTGSC 336

Query: 363 IHGLALKLGFGSGSGVHVESSLVRLYSKCGDINSARKLFDKMIVKDLVSWNVLLDGYVKC 184
           IH   +K       GV + +SL+ +YSKCG I SA  +F  +  K L  W  ++ G    
Sbjct: 337 IHSYMVKNEHPL-DGV-LGTSLIEMYSKCGSIESALAIFHSISKKKLGHWTAIIVGLGMH 394

Query: 183 GGENIEVVLRLFDEMPEKDV----FTWTVLIDGLAKSGRVEEAREVFDSM 46
           G       L+LF EM +  V     T+  +I+    +G V+  R  F+ M
Sbjct: 395 G--MASPALQLFAEMRKAGVKPNAITFVGVINACNHAGLVDHGRHYFEMM 442


>gb|KDO58423.1| hypothetical protein CISIN_1g036237mg [Citrus sinensis]
          Length = 689

 Score =  203 bits (517), Expect = 9e-50
 Identities = 120/266 (45%), Positives = 161/266 (60%), Gaps = 24/266 (9%)
 Frame = -1

Query: 726 RTKMLKPATLFHASLQPHLPPDFHHHHSLSQTSNAKEVTQLHAQHIFTSTILSNNIEKPV 547
           +T+ L+ ++  HA LQ HLP   H +  L  +S  KE  QLHA  + T+ I  + I   +
Sbjct: 2   QTQTLQHSSPIHA-LQQHLPSRLHWN-ILKFSSTHKETQQLHALSVKTNLIYHSGISSRL 59

Query: 546 KK------------------------TLFSYNTIIKRFLQNHLSQDAVMVFVKLLCCPGL 439
                                     +L  YN +IK ++ N  S +A+ +F  LL    L
Sbjct: 60  LSLYVDPHINNLHYARSIFDRILQHPSLVLYNLLIKCYVFNQRSHEALTLFCDLLD-RFL 118

Query: 438 LPDEFTLPCAIKACANLGAVREGKMIHGLALKLGFGSGSGVHVESSLVRLYSKCGDINSA 259
           LPD FTLPC IK  A LGA++EGK IHGL  KLGFG      V SSLV +Y+K G+I+  
Sbjct: 119 LPDNFTLPCVIKGAARLGAIKEGKQIHGLVFKLGFGFDK--FVLSSLVSMYAKFGEIDLG 176

Query: 258 RKLFDKMIVKDLVSWNVLLDGYVKCGGENIEVVLRLFDEMPEKDVFTWTVLIDGLAKSGR 79
           R++FD M  KDLVSWN L+DGYVK G   +EV ++LFDEMP++D+F+WT L+DG +K G+
Sbjct: 177 RRVFDAMDDKDLVSWNCLIDGYVKKG--EVEVAMKLFDEMPDRDLFSWTCLVDGFSKCGK 234

Query: 78  VEEAREVFDSMLDKNVASWNAMINGY 1
           VE ARE+F  M ++N+ SWNAMINGY
Sbjct: 235 VEIAREIFYRMPNRNLVSWNAMINGY 260



 Score = 57.8 bits (138), Expect = 8e-06
 Identities = 45/172 (26%), Positives = 87/172 (50%), Gaps = 4/172 (2%)
 Frame = -1

Query: 543 KTLFSYNTIIKRFLQNHLSQDAVMVFVKLLCCPGLLPDEFTLPCAIKACANLGAVREGKM 364
           + L ++N++I  +  N    +A+ +   +L    +LP++ TL  A+ A A L  + +G+ 
Sbjct: 279 RDLITWNSMIAGYELNGRFMEALELLETMLI-GDVLPNDATLVSALSAVAGLAVLNKGRW 337

Query: 363 IHGLALKLGFGSGSGVHVESSLVRLYSKCGDINSARKLFDKMIVKDLVSWNVLLDGYVKC 184
           +H   +K GF    GV + + L+++YSKCG I SA  +F  +  K +  W  ++ G    
Sbjct: 338 MHSYIVKNGFVV-DGV-LGTLLIQMYSKCGSIESALTVFRAISKKKVGHWTAMIVGLGMH 395

Query: 183 GGENIEVVLRLFDEM----PEKDVFTWTVLIDGLAKSGRVEEAREVFDSMLD 40
           G       L LF++M     +    T+  +++  + +G V + R  F+ M++
Sbjct: 396 G--MATQALDLFNKMCRMGMKPTAITFIGVLNACSHAGLVNDGRRYFNMMIN 445


>ref|XP_010557708.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
           chloroplastic-like isoform X2 [Tarenaya hassleriana]
          Length = 634

 Score =  203 bits (516), Expect = 1e-49
 Identities = 112/246 (45%), Positives = 150/246 (60%), Gaps = 26/246 (10%)
 Frame = -1

Query: 660 FHHHHSLSQTSNAK---EVTQLHAQHIFTSTILS----------------NNI------- 559
           F H+   S  +++K   E  QLH   + T T ++                NN+       
Sbjct: 15  FLHNDCFSLLTSSKTFDETRQLHGLSLKTGTFINPSVSSRLLSRYTAPEINNLRYARSVF 74

Query: 558 EKPVKKTLFSYNTIIKRFLQNHLSQDAVMVFVKLLCCPGLLPDEFTLPCAIKACANLGAV 379
           E+    +L  +N IIK +++NH S DA+ +F  L+      PD FT PC IK C+ L AV
Sbjct: 75  ERIPDPSLVLWNMIIKCYIENHRSHDAISLFCLLV--REFPPDNFTFPCVIKGCSRLNAV 132

Query: 378 REGKMIHGLALKLGFGSGSGVHVESSLVRLYSKCGDINSARKLFDKMIVKDLVSWNVLLD 199
            EGK IHG ALKLGF       V+SSLV LYSKCG I SA K+FD M  KDLV+WN L+D
Sbjct: 133 EEGKQIHGFALKLGFALDK--FVQSSLVSLYSKCGSIESACKVFDNMAEKDLVTWNSLID 190

Query: 198 GYVKCGGENIEVVLRLFDEMPEKDVFTWTVLIDGLAKSGRVEEAREVFDSMLDKNVASWN 19
           GY + G   +E+ L++FDEMPE+D F+WT L+DG +KSG++E+ARE+F  M +K++ SWN
Sbjct: 191 GYARSG--QVEIALKVFDEMPERDSFSWTALLDGFSKSGKIEDAREIFSKMPNKSLVSWN 248

Query: 18  AMINGY 1
           AMINGY
Sbjct: 249 AMINGY 254



 Score = 73.6 bits (179), Expect = 1e-10
 Identities = 38/89 (42%), Positives = 56/89 (62%)
 Frame = -1

Query: 306 SSLVRLYSKCGDINSARKLFDKMIVKDLVSWNVLLDGYVKCGGENIEVVLRLFDEMPEKD 127
           ++L+  +SK G I  AR++F KM  K LVSWN +++GY+K G    E   RLF+ MP +D
Sbjct: 217 TALLDGFSKSGKIEDAREIFSKMPNKSLVSWNAMINGYMKSGDP--ESARRLFNRMPSRD 274

Query: 126 VFTWTVLIDGLAKSGRVEEAREVFDSMLD 40
           + TW  +I G   +GR +EA  +F  ML+
Sbjct: 275 LVTWNSIIAGYEINGRFKEAFRMFFRMLE 303



 Score = 65.9 bits (159), Expect = 3e-08
 Identities = 50/166 (30%), Positives = 84/166 (50%)
 Frame = -1

Query: 543 KTLFSYNTIIKRFLQNHLSQDAVMVFVKLLCCPGLLPDEFTLPCAIKACANLGAVREGKM 364
           + L ++N+II  +  N   ++A  +F ++L      P + TL   I A +    +  G  
Sbjct: 273 RDLVTWNSIIAGYEINGRFKEAFRMFFRMLE-HDFKPSDATLVSVISAVSESAILSWGTW 331

Query: 363 IHGLALKLGFGSGSGVHVESSLVRLYSKCGDINSARKLFDKMIVKDLVSWNVLLDGYVKC 184
           IH   +K G   G GV + + L+ +YSKCG I +A  +F  +  K L  WN ++ G    
Sbjct: 332 IHSYMIKNGIEPG-GV-IGTLLIEMYSKCGSIENALSVFQVIRRKKLGHWNSIIAGLGMH 389

Query: 183 GGENIEVVLRLFDEMPEKDVFTWTVLIDGLAKSGRVEEAREVFDSM 46
           G  N    L LF++M E+DV         L ++G +EEA+++ ++M
Sbjct: 390 GMAN--KALELFNKMRERDV---------LCRTGHLEEAKDIVENM 424


>ref|XP_010557707.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
           chloroplastic-like isoform X1 [Tarenaya hassleriana]
          Length = 683

 Score =  203 bits (516), Expect = 1e-49
 Identities = 112/246 (45%), Positives = 150/246 (60%), Gaps = 26/246 (10%)
 Frame = -1

Query: 660 FHHHHSLSQTSNAK---EVTQLHAQHIFTSTILS----------------NNI------- 559
           F H+   S  +++K   E  QLH   + T T ++                NN+       
Sbjct: 15  FLHNDCFSLLTSSKTFDETRQLHGLSLKTGTFINPSVSSRLLSRYTAPEINNLRYARSVF 74

Query: 558 EKPVKKTLFSYNTIIKRFLQNHLSQDAVMVFVKLLCCPGLLPDEFTLPCAIKACANLGAV 379
           E+    +L  +N IIK +++NH S DA+ +F  L+      PD FT PC IK C+ L AV
Sbjct: 75  ERIPDPSLVLWNMIIKCYIENHRSHDAISLFCLLV--REFPPDNFTFPCVIKGCSRLNAV 132

Query: 378 REGKMIHGLALKLGFGSGSGVHVESSLVRLYSKCGDINSARKLFDKMIVKDLVSWNVLLD 199
            EGK IHG ALKLGF       V+SSLV LYSKCG I SA K+FD M  KDLV+WN L+D
Sbjct: 133 EEGKQIHGFALKLGFALDK--FVQSSLVSLYSKCGSIESACKVFDNMAEKDLVTWNSLID 190

Query: 198 GYVKCGGENIEVVLRLFDEMPEKDVFTWTVLIDGLAKSGRVEEAREVFDSMLDKNVASWN 19
           GY + G   +E+ L++FDEMPE+D F+WT L+DG +KSG++E+ARE+F  M +K++ SWN
Sbjct: 191 GYARSG--QVEIALKVFDEMPERDSFSWTALLDGFSKSGKIEDAREIFSKMPNKSLVSWN 248

Query: 18  AMINGY 1
           AMINGY
Sbjct: 249 AMINGY 254



 Score = 73.6 bits (179), Expect = 1e-10
 Identities = 38/89 (42%), Positives = 56/89 (62%)
 Frame = -1

Query: 306 SSLVRLYSKCGDINSARKLFDKMIVKDLVSWNVLLDGYVKCGGENIEVVLRLFDEMPEKD 127
           ++L+  +SK G I  AR++F KM  K LVSWN +++GY+K G    E   RLF+ MP +D
Sbjct: 217 TALLDGFSKSGKIEDAREIFSKMPNKSLVSWNAMINGYMKSGDP--ESARRLFNRMPSRD 274

Query: 126 VFTWTVLIDGLAKSGRVEEAREVFDSMLD 40
           + TW  +I G   +GR +EA  +F  ML+
Sbjct: 275 LVTWNSIIAGYEINGRFKEAFRMFFRMLE 303



 Score = 61.2 bits (147), Expect = 7e-07
 Identities = 49/167 (29%), Positives = 82/167 (49%), Gaps = 4/167 (2%)
 Frame = -1

Query: 543 KTLFSYNTIIKRFLQNHLSQDAVMVFVKLLCCPGLLPDEFTLPCAIKACANLGAVREGKM 364
           + L ++N+II  +  N   ++A  +F ++L      P + TL   I A +    +  G  
Sbjct: 273 RDLVTWNSIIAGYEINGRFKEAFRMFFRMLE-HDFKPSDATLVSVISAVSESAILSWGTW 331

Query: 363 IHGLALKLGFGSGSGVHVESSLVRLYSKCGDINSARKLFDKMIVKDLVSWNVLLDGYVKC 184
           IH   +K G   G GV + + L+ +YSKCG I +A  +F  +  K L  WN ++ G    
Sbjct: 332 IHSYMIKNGIEPG-GV-IGTLLIEMYSKCGSIENALSVFQVIRRKKLGHWNSIIAGLGMH 389

Query: 183 GGENIEVVLRLFDEMPEK----DVFTWTVLIDGLAKSGRVEEAREVF 55
           G  N    L LF++M E+    +  T+  +++  + +G V EAR  F
Sbjct: 390 GMAN--KALELFNKMRERGTEPNAITFVGVLNACSHTGYVNEARSYF 434


>ref|XP_006447757.1| hypothetical protein CICLE_v10014482mg [Citrus clementina]
           gi|568830445|ref|XP_006469509.1| PREDICTED:
           pentatricopeptide repeat-containing protein
           At1g08070-like [Citrus sinensis]
           gi|557550368|gb|ESR60997.1| hypothetical protein
           CICLE_v10014482mg [Citrus clementina]
          Length = 689

 Score =  203 bits (516), Expect = 1e-49
 Identities = 120/266 (45%), Positives = 161/266 (60%), Gaps = 24/266 (9%)
 Frame = -1

Query: 726 RTKMLKPATLFHASLQPHLPPDFHHHHSLSQTSNAKEVTQLHAQHIFTSTILSNNIEKPV 547
           +T+ L+ ++  HA LQ HLP   H +  L  +S  KE  QLHA  + T+ I  + I   +
Sbjct: 2   QTQTLQHSSPIHA-LQKHLPSRLHWN-ILKFSSTHKETQQLHALSVKTNLIYHSGISSRL 59

Query: 546 KK------------------------TLFSYNTIIKRFLQNHLSQDAVMVFVKLLCCPGL 439
                                     +L  YN +IK ++ N  S +A+ +F  LL    L
Sbjct: 60  LSLYVDPHINNLHYARSIFDRVLQHPSLVLYNLLIKCYVFNQRSHEALTLFCDLLH-RFL 118

Query: 438 LPDEFTLPCAIKACANLGAVREGKMIHGLALKLGFGSGSGVHVESSLVRLYSKCGDINSA 259
           LPD FTLPC IK  A LGA++EGK IHGL  KLGFG      V SSLV +Y+K G+I+  
Sbjct: 119 LPDNFTLPCVIKGAARLGAIKEGKQIHGLVFKLGFGFDK--FVLSSLVSMYAKFGEIDLG 176

Query: 258 RKLFDKMIVKDLVSWNVLLDGYVKCGGENIEVVLRLFDEMPEKDVFTWTVLIDGLAKSGR 79
           R++FD +  KDLVSWN L+DGYVK G   +EV ++LFDEMPE+D+F+WT L+DG +K G+
Sbjct: 177 RRVFDVLDDKDLVSWNCLIDGYVKKG--EVEVAMKLFDEMPERDLFSWTCLVDGFSKCGK 234

Query: 78  VEEAREVFDSMLDKNVASWNAMINGY 1
           VE ARE+F  M ++N+ SWNAMINGY
Sbjct: 235 VEIAREIFYRMPNRNLVSWNAMINGY 260


>ref|XP_009102373.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
           chloroplastic-like [Brassica rapa]
          Length = 682

 Score =  200 bits (509), Expect = 8e-49
 Identities = 108/256 (42%), Positives = 157/256 (61%), Gaps = 26/256 (10%)
 Frame = -1

Query: 690 ASLQPHLPPDFHHHHSLS---QTSNAKEVTQLHAQHIFT---------STILSNNIEKPV 547
           A + P    D+HHHH LS    +   +E  +LH   + T         S +LS    +P+
Sbjct: 6   AVVPPSSVHDYHHHHLLSLFRSSETIEEAKKLHCLSLKTGSFDHPPVSSRLLSLYTARPI 65

Query: 546 KKTLFS--------------YNTIIKRFLQNHLSQDAVMVFVKLLCCPGLLPDEFTLPCA 409
              +++              +N ++K +++NH S +A+ +F  LL      PD FTLPC 
Sbjct: 66  NDLIYARSVFDRIQSPSLPLWNMMLKCYVENHRSHEAICLFSHLLS--EFSPDNFTLPCV 123

Query: 408 IKACANLGAVREGKMIHGLALKLGFGSGSGVHVESSLVRLYSKCGDINSARKLFDKMIVK 229
           +K C+ L AV EGK IHG+++KLG        V+SSLV LYSKCG ++ ARK+FDKM  +
Sbjct: 124 LKGCSRLCAVEEGKQIHGVSVKLGLTLDK--FVQSSLVSLYSKCGMLDCARKVFDKMGER 181

Query: 228 DLVSWNVLLDGYVKCGGENIEVVLRLFDEMPEKDVFTWTVLIDGLAKSGRVEEAREVFDS 49
           DLV+WN L+DGY + G  ++E+ ++LFDE+P++D ++WT L+ G +KSG+VE AR+VFD 
Sbjct: 182 DLVTWNSLIDGYARSG--HVEIAMKLFDEIPDRDSYSWTALLHGFSKSGKVEAARDVFDK 239

Query: 48  MLDKNVASWNAMINGY 1
           M  KN+ SWNAMINGY
Sbjct: 240 MPAKNLVSWNAMINGY 255



 Score = 64.7 bits (156), Expect = 7e-08
 Identities = 53/173 (30%), Positives = 86/173 (49%), Gaps = 5/173 (2%)
 Frame = -1

Query: 546 KKTLFSYNTIIKRFLQNHLSQDAVMVFVKLLCCPG-LLPDEFTLPCAIKACANLGAVREG 370
           ++ L ++NT+I  +  N   Q+A+ +FV++L     L P+  T    I A A    +   
Sbjct: 273 ERNLITWNTVIAGYEVNGRFQEALSMFVRMLEEEDDLKPNNATYTSLISAVAASAILSTA 332

Query: 369 KMIHGLALKLGFGSGSGVHVESSLVRLYSKCGDINSARKLFDKMIVKDLVSWNVLLDGYV 190
           K +H   +K G GS  GV + + L+ +YSKCG + SA   F  +  + L  WN ++ G  
Sbjct: 333 KWVHSYMVKNGIGS-DGV-MGTLLIEMYSKCGCLESALTTFRSIHRQKLGHWNSVIVGLG 390

Query: 189 KCGGENIEVVLRLFDEMPEKDV----FTWTVLIDGLAKSGRVEEAREVFDSML 43
             G    +  L LF +M E  +     T+  L++  +  G V+EAR  FD M+
Sbjct: 391 LHG--MADEALDLFKQMQESGIKPNAVTFVGLLNACSHVGYVDEARFYFDLMV 441