BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Forsythia22_contig00022935
         (1055 letters)

Database: ./nr 
           69,698,275 sequences; 24,982,196,650 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_011089039.1| PREDICTED: RNA polymerase sigma factor sigD,...   217   e-102
ref|XP_012849780.1| PREDICTED: RNA polymerase sigma factor sigD,...   202   1e-93
ref|XP_010324724.1| PREDICTED: RNA polymerase sigma factor sigD,...   199   2e-90
emb|CDP17818.1| unnamed protein product [Coffea canephora]            202   6e-89
ref|XP_006345495.1| PREDICTED: RNA polymerase sigma factor sigD,...   194   6e-89
ref|XP_009612911.1| PREDICTED: RNA polymerase sigma factor sigD,...   192   6e-88
ref|XP_009783017.1| PREDICTED: RNA polymerase sigma factor sigD,...   188   1e-87
ref|XP_002272444.2| PREDICTED: RNA polymerase sigma factor sigD,...   188   4e-86
emb|CBI24961.3| unnamed protein product [Vitis vinifera]              188   4e-86
ref|XP_010269782.1| PREDICTED: RNA polymerase sigma factor sigD,...   184   2e-77
ref|XP_006438958.1| hypothetical protein CICLE_v10033747mg [Citr...   178   5e-77
ref|XP_006482924.1| PREDICTED: RNA polymerase sigma factor sigD,...   178   7e-77
ref|XP_011025491.1| PREDICTED: RNA polymerase sigma factor sigD,...   176   5e-75
ref|XP_006379084.1| hypothetical protein POPTR_0009s06210g [Popu...   176   5e-75
ref|XP_010103268.1| RNA polymerase sigma factor rpoD [Morus nota...   167   5e-75
ref|XP_004308689.1| PREDICTED: RNA polymerase sigma factor sigD,...   167   4e-74
ref|XP_006379083.1| hypothetical protein POPTR_0009s06210g [Popu...   171   1e-73
ref|XP_008231483.1| PREDICTED: RNA polymerase sigma factor sigD,...   160   2e-70
ref|XP_007219201.1| hypothetical protein PRUPE_ppa017025mg [Prun...   160   7e-70
ref|XP_009354359.1| PREDICTED: RNA polymerase sigma factor sigD,...   162   7e-70

>ref|XP_011089039.1| PREDICTED: RNA polymerase sigma factor sigD, chloroplastic [Sesamum
            indicum]
          Length = 446

 Score =  217 bits (552), Expect(3) = e-102
 Identities = 114/214 (53%), Positives = 152/214 (71%), Gaps = 15/214 (7%)
 Frame = -1

Query: 1049 AREMEKVFDNRGSENEVDSD--WCKGVSMTXXXXXXXKMNLECVEEKDEKHVFF-KAAKK 879
            A +MEK+ D +GSEN+      WC  V++        + +     ++D K VF  K   K
Sbjct: 76   AHDMEKLLDLKGSENDAKRGRFWCNEVAVRRKRRRKLRTSERVKNDEDGKLVFVDKKEGK 135

Query: 878  QSYLTPKEEAKFSWY-----------LKERERVEAVRKGI-SDMGEQELTSSQWAKAAGI 735
              ++T KEEA+FSW             +ER R+ AV+  + ++ G +E++SSQWAKAAGI
Sbjct: 136  SRFMTSKEEARFSWIHEDTNSLEYDLQQERARIVAVKTELLAETGRREVSSSQWAKAAGI 195

Query: 734  TQKSLENILCKGRESQERICSCYQRLVISVATSYQGKGLSLKDLIQEGRIGLIRGAIRFN 555
            +Q++L+ ILC GRES+ERI SCY+RLV+S+A+SYQGKGLSL+DL QEG IGL+RGAI+FN
Sbjct: 196  SQRNLDRILCNGRESEERITSCYRRLVVSIASSYQGKGLSLQDLTQEGSIGLLRGAIKFN 255

Query: 554  PKRGCKLSTYAYWWIRQAITRAIANKSRIFRMPG 453
            P+RG KLSTYAYWWIRQ+ITRAIANKS+I R+PG
Sbjct: 256  PERGYKLSTYAYWWIRQSITRAIANKSKIIRLPG 289



 Score =  121 bits (303), Expect(3) = e-102
 Identities = 57/82 (69%), Positives = 69/82 (84%)
 Frame = -3

Query: 246 DIIPGPQETTPEAMEKKEMVKREMQKLLNMLCDREANVLRLHYGLNGCTPWSFEEIGNLF 67
           DI+ GP E TPEAM KK+ +K E+QKLL  LCDREA++LRLHYGLNG TPWSFEEIG + 
Sbjct: 356 DIVAGPDEITPEAMVKKDQLKPEIQKLLKPLCDREAHILRLHYGLNGETPWSFEEIGRVL 415

Query: 66  KLSRERIRQINSTALSKLQRTS 1
           +LSRER+RQINS AL K+++TS
Sbjct: 416 ELSRERVRQINSAALLKIRQTS 437



 Score = 83.2 bits (204), Expect(3) = e-102
 Identities = 44/62 (70%), Positives = 49/62 (79%)
 Frame = -2

Query: 454 GSISELVPKICEANNSLSRRLQRYPTYDEXXXXXXXXXXXVRLALERNRSPISLDQAISS 275
           GSISELVPKICEAN +LSRRL+R PTYDE           VRLA+ERNRSPISLD+AI+S
Sbjct: 289 GSISELVPKICEANAALSRRLRRPPTYDEIAEAIDANSSAVRLAIERNRSPISLDEAITS 348

Query: 274 QG 269
           QG
Sbjct: 349 QG 350


>ref|XP_012849780.1| PREDICTED: RNA polymerase sigma factor sigD, chloroplastic isoform X2
            [Erythranthe guttatus]
          Length = 436

 Score =  202 bits (513), Expect(3) = 1e-93
 Identities = 110/204 (53%), Positives = 146/204 (71%), Gaps = 11/204 (5%)
 Frame = -1

Query: 1031 VFDNRGSENEVDSDWCKGVSMTXXXXXXXKMNL-ECVEEKDE----KHVFF---KAAKKQ 876
            V + R SE E +  W  GV++        ++NL EC+   D+     H F    K + K 
Sbjct: 76   VKEERESEVEREHFWRNGVAIRRKRRRRRRINLLECMNIDDDDDYQNHKFLFSDKNSGKS 135

Query: 875  SYLTPKEEAKFSWYLKERERVEAVR-KGISDMGEQE--LTSSQWAKAAGITQKSLENILC 705
             ++ PKEEAKFSW+L+ER R+EAVR + ++ M E+E  L+S QWA AAGI+QK+L+ I+ 
Sbjct: 136  RFMNPKEEAKFSWHLQERARIEAVRTEALAKMEEEEHELSSIQWANAAGISQKNLDRIIW 195

Query: 704  KGRESQERICSCYQRLVISVATSYQGKGLSLKDLIQEGRIGLIRGAIRFNPKRGCKLSTY 525
             G++S++RI   Y RLV+SVA+SYQGKGLSL+DL QEG IGL+RGAI+FNP++G KLSTY
Sbjct: 196  NGKQSEKRITKSYLRLVVSVASSYQGKGLSLQDLTQEGSIGLLRGAIKFNPEKGYKLSTY 255

Query: 524  AYWWIRQAITRAIANKSRIFRMPG 453
            AYWWIRQAITRAI  KS+I R+PG
Sbjct: 256  AYWWIRQAITRAITKKSKIIRLPG 279



 Score =  116 bits (290), Expect(3) = 1e-93
 Identities = 58/78 (74%), Positives = 66/78 (84%)
 Frame = -3

Query: 243 IIPGPQETTPEAMEKKEMVKREMQKLLNMLCDREANVLRLHYGLNGCTPWSFEEIGNLFK 64
           IIPGP E TPEAM KKE +K E++KLL  LCDREA+VLRLHYGLNG  P SFEEIG L +
Sbjct: 347 IIPGPDEMTPEAMVKKEALKPEIEKLLEPLCDREAHVLRLHYGLNGGAPRSFEEIGKLLE 406

Query: 63  LSRERIRQINSTALSKLQ 10
           LSRER+RQINS+ALSKL+
Sbjct: 407 LSRERVRQINSSALSKLR 424



 Score = 75.9 bits (185), Expect(3) = 1e-93
 Identities = 39/62 (62%), Positives = 47/62 (75%)
 Frame = -2

Query: 454 GSISELVPKICEANNSLSRRLQRYPTYDEXXXXXXXXXXXVRLALERNRSPISLDQAISS 275
           GSI ELVPKICEAN  LSR+L+R+PTY+E           VRLA+ERN+SPISLDQA +S
Sbjct: 279 GSIHELVPKICEANAVLSRKLRRFPTYEEIAEEIDANASSVRLAIERNKSPISLDQASTS 338

Query: 274 QG 269
           +G
Sbjct: 339 RG 340


>ref|XP_010324724.1| PREDICTED: RNA polymerase sigma factor sigD, chloroplastic isoform
           X1 [Solanum lycopersicum]
          Length = 423

 Score =  199 bits (505), Expect(3) = 2e-90
 Identities = 96/161 (59%), Positives = 125/161 (77%), Gaps = 1/161 (0%)
 Frame = -1

Query: 932 ECVEEKDEKHVF-FKAAKKQSYLTPKEEAKFSWYLKERERVEAVRKGISDMGEQELTSSQ 756
           EC+E + E ++F  K  K   YLT KEEAK+SWYLKE  R+E +RK + +  E +L+S Q
Sbjct: 104 ECLEMEKEDNIFNLKPLKTGFYLTHKEEAKYSWYLKEEARIEILRKMVEETSEIDLSSKQ 163

Query: 755 WAKAAGITQKSLENILCKGRESQERICSCYQRLVISVATSYQGKGLSLKDLIQEGRIGLI 576
            AKAAG++ + L+ +L   +ESQ++I  CY+ LV+SVA SYQGKGLSL+DLIQEG IGL+
Sbjct: 164 LAKAAGMSTRRLDKLLINAKESQKKIIQCYRGLVVSVAASYQGKGLSLQDLIQEGSIGLL 223

Query: 575 RGAIRFNPKRGCKLSTYAYWWIRQAITRAIANKSRIFRMPG 453
            GA +FNPK+G KLSTYAYWWIRQAI+RA+ANKSR+ R+PG
Sbjct: 224 HGAKKFNPKKGYKLSTYAYWWIRQAISRAVANKSRVIRLPG 264



 Score =  110 bits (275), Expect(3) = 2e-90
 Identities = 53/83 (63%), Positives = 71/83 (85%), Gaps = 1/83 (1%)
 Frame = -3

Query: 246 DIIPGPQETTPEAMEKKEMVKREMQKLL-NMLCDREANVLRLHYGLNGCTPWSFEEIGNL 70
           +II GP++TTPE   K++M+K++++K+L N+LCDREA +L+LH+GLNG TP SFEEIG +
Sbjct: 331 NIISGPEDTTPEENVKRQMMKQDLEKILQNVLCDREAKILKLHFGLNGDTPQSFEEIGRV 390

Query: 69  FKLSRERIRQINSTALSKLQRTS 1
            KLSRERIRQIN TALSKL+ +S
Sbjct: 391 LKLSRERIRQINCTALSKLRESS 413



 Score = 73.9 bits (180), Expect(3) = 2e-90
 Identities = 36/62 (58%), Positives = 45/62 (72%)
 Frame = -2

Query: 454 GSISELVPKICEANNSLSRRLQRYPTYDEXXXXXXXXXXXVRLALERNRSPISLDQAISS 275
           GSISELVPKIC AN  LSR+L+R P+YDE           VRL +ERNR+PIS+DQ +++
Sbjct: 264 GSISELVPKICNANTELSRKLRRMPSYDEIAEALGMDVSTVRLVIERNRAPISIDQIVTT 323

Query: 274 QG 269
           QG
Sbjct: 324 QG 325


>emb|CDP17818.1| unnamed protein product [Coffea canephora]
          Length = 445

 Score =  202 bits (513), Expect(3) = 6e-89
 Identities = 109/202 (53%), Positives = 141/202 (69%), Gaps = 3/202 (1%)
 Frame = -1

Query: 1049 AREMEKVFDNRG-SENEVDSDWCKGVSMTXXXXXXXKMNL-ECVE-EKDEKHVFFKAAKK 879
            A E+E   D R   +++ +  W  GV M        +    E +E EK   +V  K    
Sbjct: 84   AFEIENFLDFREWKKDDEEKTWRNGVLMRRKRRRKRRKAFSESLENEKVIMNVAIKPTNS 143

Query: 878  QSYLTPKEEAKFSWYLKERERVEAVRKGISDMGEQELTSSQWAKAAGITQKSLENILCKG 699
              YLTPK+EA+++  LKE  RVEAVRK I +  E E+T +QWAKAAG+++ SL+ +LC G
Sbjct: 144  GQYLTPKQEAEYTLCLKEEARVEAVRKRIEETTENEVTFAQWAKAAGMSKNSLDKVLCDG 203

Query: 698  RESQERICSCYQRLVISVATSYQGKGLSLKDLIQEGRIGLIRGAIRFNPKRGCKLSTYAY 519
            RE+QERI  CY+RLVISVA+SYQGKGLSL+DLIQEG +GL+ GA +FNP++G KLSTY Y
Sbjct: 204  REAQERITRCYRRLVISVASSYQGKGLSLQDLIQEGNLGLLHGAKKFNPEKGYKLSTYVY 263

Query: 518  WWIRQAITRAIANKSRIFRMPG 453
            WWIRQAIT+AIA KS+I R+PG
Sbjct: 264  WWIRQAITKAIAKKSKITRLPG 285



 Score =  112 bits (281), Expect(3) = 6e-89
 Identities = 53/82 (64%), Positives = 69/82 (84%)
 Frame = -3

Query: 246 DIIPGPQETTPEAMEKKEMVKREMQKLLNMLCDREANVLRLHYGLNGCTPWSFEEIGNLF 67
           +I+ GP ETTPEA+ KK+ +KR+++KLL  LCDRE N+LRL+YGLNG TP SFEEIG   
Sbjct: 352 EIVAGPDETTPEAIVKKQFMKRDIEKLLKGLCDREVNILRLYYGLNGNTPQSFEEIGRQL 411

Query: 66  KLSRERIRQINSTALSKLQRTS 1
           +LSRER+RQI+ TAL+KL++TS
Sbjct: 412 ELSRERVRQISCTALTKLRQTS 433



 Score = 63.5 bits (153), Expect(3) = 6e-89
 Identities = 35/58 (60%), Positives = 39/58 (67%)
 Frame = -2

Query: 454 GSISELVPKICEANNSLSRRLQRYPTYDEXXXXXXXXXXXVRLALERNRSPISLDQAI 281
           GS+SELVP+ICEAN  LSRRL++ PT  E           V LALERNR PISLDQ I
Sbjct: 285 GSVSELVPRICEANAVLSRRLRKLPTCQEIAEAVKRDMSTVWLALERNREPISLDQPI 342


>ref|XP_006345495.1| PREDICTED: RNA polymerase sigma factor sigD, chloroplastic-like
           [Solanum tuberosum]
          Length = 421

 Score =  194 bits (494), Expect(3) = 6e-89
 Identities = 95/161 (59%), Positives = 125/161 (77%), Gaps = 1/161 (0%)
 Frame = -1

Query: 932 ECVE-EKDEKHVFFKAAKKQSYLTPKEEAKFSWYLKERERVEAVRKGISDMGEQELTSSQ 756
           EC+E EK ++ +  K  K   YLT +EEAK+SWYLKE  R+E +RK + +  E +L+S Q
Sbjct: 102 ECLEMEKGDRILNSKPLKTGFYLTHEEEAKYSWYLKEEARIEILRKMVEETSEIDLSSKQ 161

Query: 755 WAKAAGITQKSLENILCKGRESQERICSCYQRLVISVATSYQGKGLSLKDLIQEGRIGLI 576
            AKAAG++ + L+ +L   +ESQ++I  CY+ LV+SVA SYQGKGLSL+DLIQEG IGL+
Sbjct: 162 LAKAAGMSTQRLDKLLINAKESQKKIIQCYRGLVVSVAASYQGKGLSLQDLIQEGSIGLL 221

Query: 575 RGAIRFNPKRGCKLSTYAYWWIRQAITRAIANKSRIFRMPG 453
            GA +FNPK+G KLSTYAYWWIRQAI+RA+ANKSR+ R+PG
Sbjct: 222 HGAKKFNPKKGYKLSTYAYWWIRQAISRAVANKSRVIRLPG 262



 Score =  108 bits (270), Expect(3) = 6e-89
 Identities = 52/83 (62%), Positives = 70/83 (84%), Gaps = 1/83 (1%)
 Frame = -3

Query: 246 DIIPGPQETTPEAMEKKEMVKREMQKLL-NMLCDREANVLRLHYGLNGCTPWSFEEIGNL 70
           +II GP++TTPE   K++M+K++++K+L N+LCDREA +L+LH+GLNG  P SFEEIG +
Sbjct: 329 NIISGPEDTTPEENVKRQMMKQDLEKILHNVLCDREAKILKLHFGLNGDNPQSFEEIGRV 388

Query: 69  FKLSRERIRQINSTALSKLQRTS 1
            KLSRERIRQIN TALSKL+ +S
Sbjct: 389 LKLSRERIRQINCTALSKLRESS 411



 Score = 75.1 bits (183), Expect(3) = 6e-89
 Identities = 37/62 (59%), Positives = 45/62 (72%)
 Frame = -2

Query: 454 GSISELVPKICEANNSLSRRLQRYPTYDEXXXXXXXXXXXVRLALERNRSPISLDQAISS 275
           GSISELVPKIC AN  LSR+L+R P+YDE           VRL +ERNR+PIS+DQ ++S
Sbjct: 262 GSISELVPKICNANTELSRKLRRMPSYDEIAEALGMDVSTVRLVIERNRAPISIDQIVTS 321

Query: 274 QG 269
           QG
Sbjct: 322 QG 323


>ref|XP_009612911.1| PREDICTED: RNA polymerase sigma factor sigD, chloroplastic
           [Nicotiana tomentosiformis]
          Length = 416

 Score =  192 bits (489), Expect(3) = 6e-88
 Identities = 93/156 (59%), Positives = 120/156 (76%)
 Frame = -1

Query: 920 EKDEKHVFFKAAKKQSYLTPKEEAKFSWYLKERERVEAVRKGISDMGEQELTSSQWAKAA 741
           EK++K    K  K   YLT KEE+++SWYLKE  R+E +RK + +  E EL  +Q AKAA
Sbjct: 102 EKEDKISISKPVKTGLYLTLKEESEYSWYLKEEARIETLRKRVEETSEIELNPNQLAKAA 161

Query: 740 GITQKSLENILCKGRESQERICSCYQRLVISVATSYQGKGLSLKDLIQEGRIGLIRGAIR 561
           G++++ L+ +L   + SQ++I  CY+ LV+SVA SYQGKGLSL+DLIQEG IGL+ GA +
Sbjct: 162 GMSRRRLDKLLVNAKISQKKIIKCYRGLVVSVAASYQGKGLSLQDLIQEGSIGLLHGAKK 221

Query: 560 FNPKRGCKLSTYAYWWIRQAITRAIANKSRIFRMPG 453
           FNPK+G KLSTYAYWWIRQAITRAIANKSR+ R+PG
Sbjct: 222 FNPKKGYKLSTYAYWWIRQAITRAIANKSRVIRLPG 257



 Score =  108 bits (270), Expect(3) = 6e-88
 Identities = 52/83 (62%), Positives = 70/83 (84%), Gaps = 1/83 (1%)
 Frame = -3

Query: 246 DIIPGPQETTPEAMEKKEMVKREMQKLL-NMLCDREANVLRLHYGLNGCTPWSFEEIGNL 70
           DII GP++  PE + K++M+K++++KLL N+LCDREA +L+LH+GLNG TP SFEEIG +
Sbjct: 324 DIISGPEDIIPEEIVKRQMMKQDLEKLLHNVLCDREAKILKLHFGLNGDTPQSFEEIGKV 383

Query: 69  FKLSRERIRQINSTALSKLQRTS 1
            KLSRERIRQIN TALSKL+ ++
Sbjct: 384 LKLSRERIRQINCTALSKLREST 406



 Score = 73.6 bits (179), Expect(3) = 6e-88
 Identities = 36/62 (58%), Positives = 45/62 (72%)
 Frame = -2

Query: 454 GSISELVPKICEANNSLSRRLQRYPTYDEXXXXXXXXXXXVRLALERNRSPISLDQAISS 275
           GSISELVPKIC AN  LSR+L+R P+YDE           VRL +ERNR+PIS+DQ ++S
Sbjct: 257 GSISELVPKICNANTELSRKLRRMPSYDEIAEALDMDVSTVRLVIERNRAPISIDQIVTS 316

Query: 274 QG 269
           +G
Sbjct: 317 KG 318


>ref|XP_009783017.1| PREDICTED: RNA polymerase sigma factor sigD, chloroplastic
           [Nicotiana sylvestris]
          Length = 426

 Score =  188 bits (477), Expect(3) = 1e-87
 Identities = 92/161 (57%), Positives = 121/161 (75%), Gaps = 1/161 (0%)
 Frame = -1

Query: 932 ECVE-EKDEKHVFFKAAKKQSYLTPKEEAKFSWYLKERERVEAVRKGISDMGEQELTSSQ 756
           EC++ +K +K    K  K   YLT KEE+++SWYLKE  R+E +RK + +  E E+  +Q
Sbjct: 107 ECLDMDKGDKISISKPVKTGLYLTLKEESEYSWYLKEEARMETLRKRVEETSEIEVNPNQ 166

Query: 755 WAKAAGITQKSLENILCKGRESQERICSCYQRLVISVATSYQGKGLSLKDLIQEGRIGLI 576
            AKAAG++++ L+ +L   + SQ++I  CY  LV+SVA SYQGKGLSL+DLIQEG IGL+
Sbjct: 167 LAKAAGMSRRRLDKVLINAKISQKKIIKCYTGLVVSVAASYQGKGLSLQDLIQEGSIGLL 226

Query: 575 RGAIRFNPKRGCKLSTYAYWWIRQAITRAIANKSRIFRMPG 453
            GA +FNP +G KLSTYAYWWIRQAITRAIANKSR+ R+PG
Sbjct: 227 HGAKKFNPNKGYKLSTYAYWWIRQAITRAIANKSRVIRLPG 267



 Score =  109 bits (272), Expect(3) = 1e-87
 Identities = 53/83 (63%), Positives = 70/83 (84%), Gaps = 1/83 (1%)
 Frame = -3

Query: 246 DIIPGPQETTPEAMEKKEMVKREMQKLL-NMLCDREANVLRLHYGLNGCTPWSFEEIGNL 70
           DII GP++  PE + K++M+K++++KLL N+LCDREA +L+LH+GLNG TP SFEEIG +
Sbjct: 334 DIISGPEDILPEEILKRQMMKQDLEKLLHNVLCDREAKILKLHFGLNGDTPQSFEEIGKV 393

Query: 69  FKLSRERIRQINSTALSKLQRTS 1
            KLSRERIRQIN TALSKL+ +S
Sbjct: 394 LKLSRERIRQINCTALSKLRESS 416



 Score = 76.6 bits (187), Expect(3) = 1e-87
 Identities = 38/62 (61%), Positives = 45/62 (72%)
 Frame = -2

Query: 454 GSISELVPKICEANNSLSRRLQRYPTYDEXXXXXXXXXXXVRLALERNRSPISLDQAISS 275
           GSISELVPKIC AN  LSR+LQR P+YDE           VRL +ERNR+PIS+DQ ++S
Sbjct: 267 GSISELVPKICNANTELSRKLQRMPSYDEIAEALDMDVSTVRLVIERNRAPISIDQIVTS 326

Query: 274 QG 269
           QG
Sbjct: 327 QG 328


>ref|XP_002272444.2| PREDICTED: RNA polymerase sigma factor sigD, chloroplastic [Vitis
           vinifera]
          Length = 442

 Score =  188 bits (478), Expect(3) = 4e-86
 Identities = 94/154 (61%), Positives = 116/154 (75%)
 Frame = -1

Query: 914 DEKHVFFKAAKKQSYLTPKEEAKFSWYLKERERVEAVRKGISDMGEQELTSSQWAKAAGI 735
           +E H     A + + LTP+EEA+F   LKE   +EA R+ I++  E E TS+QWA+A GI
Sbjct: 131 EEVHEVSFGAARSAVLTPREEAEFCLCLKEEAGLEAARRRIAETREHEPTSNQWAEAVGI 190

Query: 734 TQKSLENILCKGRESQERICSCYQRLVISVATSYQGKGLSLKDLIQEGRIGLIRGAIRFN 555
            + SL+ +LC GRES+ERI   Y+RLV+S+A  YQGKGLSL+DLIQEG IGL+RGA RF+
Sbjct: 191 KRSSLDKMLCNGRESRERINQSYRRLVVSIAARYQGKGLSLQDLIQEGSIGLLRGAERFD 250

Query: 554 PKRGCKLSTYAYWWIRQAITRAIANKSRIFRMPG 453
           P RG KLSTY YWWIRQAI RAIANKSRI R+PG
Sbjct: 251 PDRGYKLSTYVYWWIRQAIVRAIANKSRIIRLPG 284



 Score =  114 bits (286), Expect(3) = 4e-86
 Identities = 53/82 (64%), Positives = 71/82 (86%)
 Frame = -3

Query: 246 DIIPGPQETTPEAMEKKEMVKREMQKLLNMLCDREANVLRLHYGLNGCTPWSFEEIGNLF 67
           +IIPGP ETTP+ M K++++K+E+++ LN LC+REA +LRL++G+NG TP SFEEIG L 
Sbjct: 351 EIIPGPDETTPQKMVKRQLMKQEVERALNTLCEREAYILRLYFGINGETPLSFEEIGRLM 410

Query: 66  KLSRERIRQINSTALSKLQRTS 1
           KLSRER+RQINS ALSKL++TS
Sbjct: 411 KLSRERVRQINSIALSKLRQTS 432



 Score = 65.5 bits (158), Expect(3) = 4e-86
 Identities = 35/62 (56%), Positives = 42/62 (67%)
 Frame = -2

Query: 454 GSISELVPKICEANNSLSRRLQRYPTYDEXXXXXXXXXXXVRLALERNRSPISLDQAISS 275
           GSI E+V KI EA   LSRRL+R PTYDE           VRL  ER+R+PIS+DQA++S
Sbjct: 284 GSICEMVAKIAEARTVLSRRLRRLPTYDEIAEFIDVNVSTVRLVSERSRTPISVDQAVTS 343

Query: 274 QG 269
           QG
Sbjct: 344 QG 345


>emb|CBI24961.3| unnamed protein product [Vitis vinifera]
          Length = 319

 Score =  188 bits (478), Expect(3) = 4e-86
 Identities = 94/154 (61%), Positives = 116/154 (75%)
 Frame = -1

Query: 914 DEKHVFFKAAKKQSYLTPKEEAKFSWYLKERERVEAVRKGISDMGEQELTSSQWAKAAGI 735
           +E H     A + + LTP+EEA+F   LKE   +EA R+ I++  E E TS+QWA+A GI
Sbjct: 8   EEVHEVSFGAARSAVLTPREEAEFCLCLKEEAGLEAARRRIAETREHEPTSNQWAEAVGI 67

Query: 734 TQKSLENILCKGRESQERICSCYQRLVISVATSYQGKGLSLKDLIQEGRIGLIRGAIRFN 555
            + SL+ +LC GRES+ERI   Y+RLV+S+A  YQGKGLSL+DLIQEG IGL+RGA RF+
Sbjct: 68  KRSSLDKMLCNGRESRERINQSYRRLVVSIAARYQGKGLSLQDLIQEGSIGLLRGAERFD 127

Query: 554 PKRGCKLSTYAYWWIRQAITRAIANKSRIFRMPG 453
           P RG KLSTY YWWIRQAI RAIANKSRI R+PG
Sbjct: 128 PDRGYKLSTYVYWWIRQAIVRAIANKSRIIRLPG 161



 Score =  114 bits (286), Expect(3) = 4e-86
 Identities = 53/82 (64%), Positives = 71/82 (86%)
 Frame = -3

Query: 246 DIIPGPQETTPEAMEKKEMVKREMQKLLNMLCDREANVLRLHYGLNGCTPWSFEEIGNLF 67
           +IIPGP ETTP+ M K++++K+E+++ LN LC+REA +LRL++G+NG TP SFEEIG L 
Sbjct: 228 EIIPGPDETTPQKMVKRQLMKQEVERALNTLCEREAYILRLYFGINGETPLSFEEIGRLM 287

Query: 66  KLSRERIRQINSTALSKLQRTS 1
           KLSRER+RQINS ALSKL++TS
Sbjct: 288 KLSRERVRQINSIALSKLRQTS 309



 Score = 65.5 bits (158), Expect(3) = 4e-86
 Identities = 35/62 (56%), Positives = 42/62 (67%)
 Frame = -2

Query: 454 GSISELVPKICEANNSLSRRLQRYPTYDEXXXXXXXXXXXVRLALERNRSPISLDQAISS 275
           GSI E+V KI EA   LSRRL+R PTYDE           VRL  ER+R+PIS+DQA++S
Sbjct: 161 GSICEMVAKIAEARTVLSRRLRRLPTYDEIAEFIDVNVSTVRLVSERSRTPISVDQAVTS 220

Query: 274 QG 269
           QG
Sbjct: 221 QG 222


>ref|XP_010269782.1| PREDICTED: RNA polymerase sigma factor sigD, chloroplastic [Nelumbo
           nucifera]
          Length = 455

 Score =  184 bits (467), Expect(3) = 2e-77
 Identities = 88/143 (61%), Positives = 113/143 (79%)
 Frame = -1

Query: 881 KQSYLTPKEEAKFSWYLKERERVEAVRKGISDMGEQELTSSQWAKAAGITQKSLENILCK 702
           +  YLTPKEEA+FS YLKE  R+EA R  + +  E E TSSQWA+AAG+   +L+ +LC+
Sbjct: 155 RSMYLTPKEEAEFSLYLKEEARLEAARTRLRETNEHEPTSSQWAEAAGMRGATLDKMLCQ 214

Query: 701 GRESQERICSCYQRLVISVATSYQGKGLSLKDLIQEGRIGLIRGAIRFNPKRGCKLSTYA 522
            RES+ERI   Y+RL+ S+A+ YQGKGLSL+DLIQEG IGL+RG  RF+P++G KLSTY 
Sbjct: 215 ARESRERIVFSYRRLIFSIASGYQGKGLSLQDLIQEGSIGLLRGXERFDPRKGYKLSTYV 274

Query: 521 YWWIRQAITRAIANKSRIFRMPG 453
           YWWI+QAI RAIA+KSR+ R+PG
Sbjct: 275 YWWIKQAIIRAIASKSRMVRLPG 297



 Score =  102 bits (253), Expect(3) = 2e-77
 Identities = 48/82 (58%), Positives = 68/82 (82%)
 Frame = -3

Query: 246 DIIPGPQETTPEAMEKKEMVKREMQKLLNMLCDREANVLRLHYGLNGCTPWSFEEIGNLF 67
           +II GP+ETTPE M  ++++K+E+++LL +L +REAN+LRL++GLNG TP SFEEIG L 
Sbjct: 364 EIISGPEETTPETMVNRQLMKQEVERLLKILGEREANILRLYFGLNGETPCSFEEIGRLL 423

Query: 66  KLSRERIRQINSTALSKLQRTS 1
            LSRER+RQI   AL+KLQ+++
Sbjct: 424 NLSRERVRQIYYIALAKLQQSN 445



 Score = 53.5 bits (127), Expect(3) = 2e-77
 Identities = 29/62 (46%), Positives = 36/62 (58%)
 Frame = -2

Query: 454 GSISELVPKICEANNSLSRRLQRYPTYDEXXXXXXXXXXXVRLALERNRSPISLDQAISS 275
           GS+SE++ KI EAN  LS RL R PTYDE           V L  ER+R P+S+D+  S 
Sbjct: 297 GSVSEMMAKIAEANTVLSTRLGRVPTYDEIADMLGICVSTVSLLCERSRPPMSVDRTYSD 356

Query: 274 QG 269
            G
Sbjct: 357 HG 358


>ref|XP_006438958.1| hypothetical protein CICLE_v10033747mg [Citrus clementina]
           gi|557541154|gb|ESR52198.1| hypothetical protein
           CICLE_v10033747mg [Citrus clementina]
          Length = 436

 Score =  178 bits (451), Expect(3) = 5e-77
 Identities = 89/147 (60%), Positives = 105/147 (71%)
 Frame = -1

Query: 893 KAAKKQSYLTPKEEAKFSWYLKERERVEAVRKGISDMGEQELTSSQWAKAAGITQKSLEN 714
           K      YLTP EEA+  + LKE  ++E  RK ++   E E  S Q AKA G+ Q  ++ 
Sbjct: 132 KCKTSNLYLTPSEEAEICYSLKEGAKLEEARKTVAQAEEHESISKQLAKATGMKQSKVDK 191

Query: 713 ILCKGRESQERICSCYQRLVISVATSYQGKGLSLKDLIQEGRIGLIRGAIRFNPKRGCKL 534
           ILCK RESQERI   Y+ LV+S+AT YQGKGLSLKDLIQEG IGL+RGA RFNP+RG KL
Sbjct: 192 ILCKERESQERIIRSYRSLVVSIATGYQGKGLSLKDLIQEGSIGLLRGAKRFNPERGYKL 251

Query: 533 STYAYWWIRQAITRAIANKSRIFRMPG 453
           STY YWWI+QAI R IANKSR  R+PG
Sbjct: 252 STYVYWWIKQAIIRTIANKSRTIRLPG 278



 Score =  100 bits (250), Expect(3) = 5e-77
 Identities = 48/82 (58%), Positives = 66/82 (80%)
 Frame = -3

Query: 246 DIIPGPQETTPEAMEKKEMVKREMQKLLNMLCDREANVLRLHYGLNGCTPWSFEEIGNLF 67
           DIIPGP ET PE M +K+++K+E+++LL  L +REA++LRLH+GL+G TP S +EIG L 
Sbjct: 345 DIIPGPDETMPEKMVQKQLMKQELKELLQTLSEREADILRLHFGLDGQTPVSCKEIGRLL 404

Query: 66  KLSRERIRQINSTALSKLQRTS 1
            LSRER+RQI   AL+KLQ+T+
Sbjct: 405 TLSRERVRQIRGIALTKLQQTN 426



 Score = 59.3 bits (142), Expect(3) = 5e-77
 Identities = 34/62 (54%), Positives = 40/62 (64%)
 Frame = -2

Query: 454 GSISELVPKICEANNSLSRRLQRYPTYDEXXXXXXXXXXXVRLALERNRSPISLDQAISS 275
           GS+S +V KI EANN LSRRL+R PT +E           VRLA+ER R PISLD AI+ 
Sbjct: 278 GSMSGMVAKIAEANNVLSRRLRRMPTDNEIAEMLNIHVSTVRLAIERTRHPISLDGAITD 337

Query: 274 QG 269
            G
Sbjct: 338 TG 339


>ref|XP_006482924.1| PREDICTED: RNA polymerase sigma factor sigD, chloroplastic-like
           [Citrus sinensis]
          Length = 436

 Score =  178 bits (451), Expect(3) = 7e-77
 Identities = 89/147 (60%), Positives = 105/147 (71%)
 Frame = -1

Query: 893 KAAKKQSYLTPKEEAKFSWYLKERERVEAVRKGISDMGEQELTSSQWAKAAGITQKSLEN 714
           K      YLTP EEA+  + LKE  ++E  RK ++   E E  S Q AKA G+ Q  ++ 
Sbjct: 132 KCKTSNLYLTPSEEAEICYSLKEGAKLEEARKTVAQAEEHESISKQLAKATGMKQSKVDK 191

Query: 713 ILCKGRESQERICSCYQRLVISVATSYQGKGLSLKDLIQEGRIGLIRGAIRFNPKRGCKL 534
           ILCK RESQERI   Y+ LV+S+AT YQGKGLSLKDLIQEG IGL+RGA RFNP+RG KL
Sbjct: 192 ILCKERESQERIIRSYRSLVVSIATGYQGKGLSLKDLIQEGSIGLLRGAKRFNPERGYKL 251

Query: 533 STYAYWWIRQAITRAIANKSRIFRMPG 453
           STY YWWI+QAI R IANKSR  R+PG
Sbjct: 252 STYVYWWIKQAIIRTIANKSRTIRLPG 278



 Score =  100 bits (250), Expect(3) = 7e-77
 Identities = 48/82 (58%), Positives = 66/82 (80%)
 Frame = -3

Query: 246 DIIPGPQETTPEAMEKKEMVKREMQKLLNMLCDREANVLRLHYGLNGCTPWSFEEIGNLF 67
           DIIPGP ET PE M +K+++K+E+++LL  L +REA++LRLH+GL+G TP S +EIG L 
Sbjct: 345 DIIPGPDETMPEKMVQKQLMKQELKELLQTLSEREADILRLHFGLDGQTPVSCKEIGRLL 404

Query: 66  KLSRERIRQINSTALSKLQRTS 1
            LSRER+RQI   AL+KLQ+T+
Sbjct: 405 TLSRERVRQIRGIALTKLQQTN 426



 Score = 58.9 bits (141), Expect(3) = 7e-77
 Identities = 34/62 (54%), Positives = 39/62 (62%)
 Frame = -2

Query: 454 GSISELVPKICEANNSLSRRLQRYPTYDEXXXXXXXXXXXVRLALERNRSPISLDQAISS 275
           GS+S +V KI EANN LSRRL+R PT  E           VRLA+ER R PISLD AI+ 
Sbjct: 278 GSMSGMVAKIAEANNVLSRRLRRMPTDSEIAEMLNIHVSNVRLAIERTRHPISLDGAITD 337

Query: 274 QG 269
            G
Sbjct: 338 TG 339


>ref|XP_011025491.1| PREDICTED: RNA polymerase sigma factor sigD, chloroplastic isoform
           X1 [Populus euphratica]
          Length = 423

 Score =  176 bits (447), Expect(3) = 5e-75
 Identities = 87/161 (54%), Positives = 121/161 (75%), Gaps = 3/161 (1%)
 Frame = -1

Query: 920 EKDEKHVFFKA---AKKQSYLTPKEEAKFSWYLKERERVEAVRKGISDMGEQELTSSQWA 750
           E+D  H + +    + K+ YL+PKEEA+FS  LK   R+EA R+ I D+ E + TS Q A
Sbjct: 106 ERDVGHEYRRVILESVKRGYLSPKEEAEFSMCLKHEARIEAARRRIGDVQELDPTSKQLA 165

Query: 749 KAAGITQKSLENILCKGRESQERICSCYQRLVISVATSYQGKGLSLKDLIQEGRIGLIRG 570
           KA  + + +++N+LCKGRES+E+I   Y+RLV+S+ATSYQ KGLSL+DLIQEG IGL+RG
Sbjct: 166 KALRMEKNTVDNVLCKGRESREKIIRSYRRLVVSIATSYQDKGLSLQDLIQEGSIGLLRG 225

Query: 569 AIRFNPKRGCKLSTYAYWWIRQAITRAIANKSRIFRMPGQY 447
           A RF+P+RG KLSTY YWWI++AI  AI+N +R+ R+P ++
Sbjct: 226 AERFDPQRGYKLSTYVYWWIKEAILTAISNNTRMVRLPRRW 266



 Score =  100 bits (249), Expect(3) = 5e-75
 Identities = 51/80 (63%), Positives = 65/80 (81%), Gaps = 1/80 (1%)
 Frame = -3

Query: 246 DIIPGPQETTPEAMEKKEMVKREMQKLLN-MLCDREANVLRLHYGLNGCTPWSFEEIGNL 70
           +IIPGP ET PE M K+E++K+E++KL   +L +REA++LRLH+GLNG TP S EEIG L
Sbjct: 331 EIIPGPDETIPENMVKRELLKQELEKLFQTVLTEREAHILRLHFGLNGQTPQSCEEIGRL 390

Query: 69  FKLSRERIRQINSTALSKLQ 10
            KLSRER+RQI  TALSKL+
Sbjct: 391 VKLSRERVRQIICTALSKLR 410



 Score = 54.7 bits (130), Expect(3) = 5e-75
 Identities = 30/56 (53%), Positives = 34/56 (60%)
 Frame = -2

Query: 439 LVPKICEANNSLSRRLQRYPTYDEXXXXXXXXXXXVRLALERNRSPISLDQAISSQ 272
           LV KI  ANN LS +L+R P+YDE           VRL  ER RSPISLDQA+  Q
Sbjct: 269 LVAKIAGANNDLSNKLRRSPSYDEIAEVLNMKVSTVRLGFERGRSPISLDQAVLGQ 324


>ref|XP_006379084.1| hypothetical protein POPTR_0009s06210g [Populus trichocarpa]
           gi|550331146|gb|ERP56881.1| hypothetical protein
           POPTR_0009s06210g [Populus trichocarpa]
          Length = 423

 Score =  176 bits (446), Expect(3) = 5e-75
 Identities = 87/161 (54%), Positives = 121/161 (75%), Gaps = 3/161 (1%)
 Frame = -1

Query: 920 EKDEKHVFFKA---AKKQSYLTPKEEAKFSWYLKERERVEAVRKGISDMGEQELTSSQWA 750
           E+D  H + +    + K+ YL+PKEEA+FS  LK   R+EA R+ I ++ E + TS Q A
Sbjct: 106 ERDGGHEYKRVILESVKRGYLSPKEEAEFSMCLKHEARIEAARRRIGEVQELDPTSKQLA 165

Query: 749 KAAGITQKSLENILCKGRESQERICSCYQRLVISVATSYQGKGLSLKDLIQEGRIGLIRG 570
           KA  + + S++N+LCKGRES+E+I   Y+RLV+S+ATSYQ KGLSL+DLIQEG IGL+RG
Sbjct: 166 KALRMEKNSVDNVLCKGRESREKIIRSYRRLVVSIATSYQDKGLSLQDLIQEGSIGLLRG 225

Query: 569 AIRFNPKRGCKLSTYAYWWIRQAITRAIANKSRIFRMPGQY 447
           A RF+P+RG KLSTY YWWI++AI  AI+N +R+ R+P ++
Sbjct: 226 AERFDPQRGYKLSTYVYWWIKEAILTAISNNTRMVRLPRRW 266



 Score =  100 bits (250), Expect(3) = 5e-75
 Identities = 51/80 (63%), Positives = 65/80 (81%), Gaps = 1/80 (1%)
 Frame = -3

Query: 246 DIIPGPQETTPEAMEKKEMVKREMQKLLN-MLCDREANVLRLHYGLNGCTPWSFEEIGNL 70
           +IIPGP ET PE M K+E++K+E++KL   +L +REA++LRLH+GLNG TP S EEIG L
Sbjct: 331 EIIPGPDETIPENMVKRELLKQELEKLFQTVLTEREAHILRLHFGLNGQTPQSCEEIGRL 390

Query: 69  FKLSRERIRQINSTALSKLQ 10
            KLSRER+RQI  TALSKL+
Sbjct: 391 VKLSRERVRQIIGTALSKLR 410



 Score = 54.7 bits (130), Expect(3) = 5e-75
 Identities = 30/56 (53%), Positives = 34/56 (60%)
 Frame = -2

Query: 439 LVPKICEANNSLSRRLQRYPTYDEXXXXXXXXXXXVRLALERNRSPISLDQAISSQ 272
           LV KI  ANN LS +L+R P+YDE           VRL  ER RSPISLDQA+  Q
Sbjct: 269 LVAKIAGANNDLSNKLRRSPSYDEIAKVLNMKVSTVRLGFERGRSPISLDQAVLGQ 324


>ref|XP_010103268.1| RNA polymerase sigma factor rpoD [Morus notabilis]
           gi|587907279|gb|EXB95293.1| RNA polymerase sigma factor
           rpoD [Morus notabilis]
          Length = 422

 Score =  167 bits (423), Expect(3) = 5e-75
 Identities = 86/162 (53%), Positives = 114/162 (70%), Gaps = 1/162 (0%)
 Frame = -1

Query: 935 LECVEEKDEKHVFFKAAK-KQSYLTPKEEAKFSWYLKERERVEAVRKGISDMGEQELTSS 759
           L+  E+ D + + F     K  YL+P+EEA+    LKE  ++EA R  +++  + E TS 
Sbjct: 100 LDTDEKSDGEDMRFSIGPMKLGYLSPREEAECCLILKEGAKLEATRLRMTNSEDHEPTSK 159

Query: 758 QWAKAAGITQKSLENILCKGRESQERICSCYQRLVISVATSYQGKGLSLKDLIQEGRIGL 579
           + AKA G+  +S++ +LC  RESQERI   Y+RLV+SVA  YQGKGLS  DLIQEG +GL
Sbjct: 160 ELAKAMGMEMRSIDKMLCDKRESQERISRSYRRLVVSVAAGYQGKGLSFPDLIQEGSVGL 219

Query: 578 IRGAIRFNPKRGCKLSTYAYWWIRQAITRAIANKSRIFRMPG 453
           +RGA +F+P+RG KLSTY YWWIRQAI RAI NKSR+ R+PG
Sbjct: 220 LRGAQKFDPQRGNKLSTYVYWWIRQAIIRAIENKSRVVRLPG 261



 Score =  106 bits (264), Expect(3) = 5e-75
 Identities = 54/83 (65%), Positives = 69/83 (83%), Gaps = 1/83 (1%)
 Frame = -3

Query: 246 DIIPGPQETTPEAMEKKEMVKREMQKLLN-MLCDREANVLRLHYGLNGCTPWSFEEIGNL 70
           +IIPGP+E +PE M +K+++K+E++KLL  +L DREANVLRLH+GL+G  P S EEIG L
Sbjct: 328 EIIPGPEEISPEKMVRKQLMKQEIEKLLKTVLSDREANVLRLHFGLSGDIPLSCEEIGRL 387

Query: 69  FKLSRERIRQINSTALSKLQRTS 1
            KLSRERIRQIN  ALSKLQ+T+
Sbjct: 388 LKLSRERIRQINGIALSKLQQTN 410



 Score = 58.2 bits (139), Expect(3) = 5e-75
 Identities = 30/62 (48%), Positives = 41/62 (66%)
 Frame = -2

Query: 454 GSISELVPKICEANNSLSRRLQRYPTYDEXXXXXXXXXXXVRLALERNRSPISLDQAISS 275
           G++  +V K+ EANN L++RL+R+PTYDE           VRL  ER R PISLD+AI+ 
Sbjct: 261 GNMCGIVAKVTEANNVLNKRLRRFPTYDEIAQVVGVHVSTVRLVSERIRPPISLDRAITE 320

Query: 274 QG 269
           +G
Sbjct: 321 RG 322


>ref|XP_004308689.1| PREDICTED: RNA polymerase sigma factor sigD, chloroplastic
           [Fragaria vesca subsp. vesca]
          Length = 452

 Score =  167 bits (422), Expect(3) = 4e-74
 Identities = 88/166 (53%), Positives = 112/166 (67%), Gaps = 5/166 (3%)
 Frame = -1

Query: 935 LECVEEKD-----EKHVFFKAAKKQSYLTPKEEAKFSWYLKERERVEAVRKGISDMGEQE 771
           LEC ++++     E   F        YL+P+EEA     LKE  ++E+ R   ++  E E
Sbjct: 129 LECFDDEERNRELEDGRFSFGVVSYGYLSPREEADCCMSLKEGAKLESERTRFTEAQEHE 188

Query: 770 LTSSQWAKAAGITQKSLENILCKGRESQERICSCYQRLVISVATSYQGKGLSLKDLIQEG 591
            TS Q A A  I   S++ ++C  RESQERI   Y+ LV+SVA+SYQGKGLSL+DLIQEG
Sbjct: 189 PTSKQLANAMRIKMSSIDKVICNRRESQERIIKSYRGLVVSVASSYQGKGLSLQDLIQEG 248

Query: 590 RIGLIRGAIRFNPKRGCKLSTYAYWWIRQAITRAIANKSRIFRMPG 453
            IGL+RGA +F+P+RG KLSTY YWWIRQAI RAI NKSRI R+PG
Sbjct: 249 SIGLLRGAEKFDPERGLKLSTYVYWWIRQAIIRAIENKSRIIRLPG 294



 Score =  117 bits (293), Expect(3) = 4e-74
 Identities = 59/82 (71%), Positives = 68/82 (82%)
 Frame = -3

Query: 246 DIIPGPQETTPEAMEKKEMVKREMQKLLNMLCDREANVLRLHYGLNGCTPWSFEEIGNLF 67
           DII GP E  PE M KK+++K+EM+KLLN L DREA VLRLH+GLNG TP SFEEIG L 
Sbjct: 361 DIIRGPDEMMPETMLKKQLMKQEMEKLLNRLSDREAEVLRLHFGLNGDTPQSFEEIGRLL 420

Query: 66  KLSRERIRQINSTALSKLQRTS 1
           KLSRER+RQINS ALSKL++TS
Sbjct: 421 KLSRERVRQINSIALSKLKQTS 442



 Score = 44.3 bits (103), Expect(3) = 4e-74
 Identities = 22/62 (35%), Positives = 35/62 (56%)
 Frame = -2

Query: 454 GSISELVPKICEANNSLSRRLQRYPTYDEXXXXXXXXXXXVRLALERNRSPISLDQAISS 275
           G +  ++ KI  A  + ++R QR P++DE           VRL  ER+R P+SLD+ ++ 
Sbjct: 294 GHMCGVMAKITRAKKNFNQRFQRLPSHDEIAEMINVQASIVRLVCERSRLPLSLDRVVTD 353

Query: 274 QG 269
           QG
Sbjct: 354 QG 355


>ref|XP_006379083.1| hypothetical protein POPTR_0009s06210g [Populus trichocarpa]
           gi|550331145|gb|ERP56880.1| hypothetical protein
           POPTR_0009s06210g [Populus trichocarpa]
          Length = 419

 Score =  171 bits (434), Expect(3) = 1e-73
 Identities = 86/156 (55%), Positives = 117/156 (75%), Gaps = 3/156 (1%)
 Frame = -1

Query: 920 EKDEKHVFFKA---AKKQSYLTPKEEAKFSWYLKERERVEAVRKGISDMGEQELTSSQWA 750
           E+D  H + +    + K+ YL+PKEEA+FS  LK   R+EA R+ I ++ E + TS Q A
Sbjct: 106 ERDGGHEYKRVILESVKRGYLSPKEEAEFSMCLKHEARIEAARRRIGEVQELDPTSKQLA 165

Query: 749 KAAGITQKSLENILCKGRESQERICSCYQRLVISVATSYQGKGLSLKDLIQEGRIGLIRG 570
           KA  + + S++N+LCKGRES+E+I   Y+RLV+S+ATSYQ KGLSL+DLIQEG IGL+RG
Sbjct: 166 KALRMEKNSVDNVLCKGRESREKIIRSYRRLVVSIATSYQDKGLSLQDLIQEGSIGLLRG 225

Query: 569 AIRFNPKRGCKLSTYAYWWIRQAITRAIANKSRIFR 462
           A RF+P+RG KLSTY YWWI++AI  AI+N +R+ R
Sbjct: 226 AERFDPQRGYKLSTYVYWWIKEAILTAISNNTRMRR 261



 Score =  100 bits (250), Expect(3) = 1e-73
 Identities = 51/80 (63%), Positives = 65/80 (81%), Gaps = 1/80 (1%)
 Frame = -3

Query: 246 DIIPGPQETTPEAMEKKEMVKREMQKLLN-MLCDREANVLRLHYGLNGCTPWSFEEIGNL 70
           +IIPGP ET PE M K+E++K+E++KL   +L +REA++LRLH+GLNG TP S EEIG L
Sbjct: 327 EIIPGPDETIPENMVKRELLKQELEKLFQTVLTEREAHILRLHFGLNGQTPQSCEEIGRL 386

Query: 69  FKLSRERIRQINSTALSKLQ 10
            KLSRER+RQI  TALSKL+
Sbjct: 387 VKLSRERVRQIIGTALSKLR 406



 Score = 54.7 bits (130), Expect(3) = 1e-73
 Identities = 30/56 (53%), Positives = 34/56 (60%)
 Frame = -2

Query: 439 LVPKICEANNSLSRRLQRYPTYDEXXXXXXXXXXXVRLALERNRSPISLDQAISSQ 272
           LV KI  ANN LS +L+R P+YDE           VRL  ER RSPISLDQA+  Q
Sbjct: 265 LVAKIAGANNDLSNKLRRSPSYDEIAKVLNMKVSTVRLGFERGRSPISLDQAVLGQ 320


>ref|XP_008231483.1| PREDICTED: RNA polymerase sigma factor sigD, chloroplastic [Prunus
           mume]
          Length = 442

 Score =  160 bits (404), Expect(3) = 2e-70
 Identities = 81/143 (56%), Positives = 106/143 (74%)
 Frame = -1

Query: 881 KQSYLTPKEEAKFSWYLKERERVEAVRKGISDMGEQELTSSQWAKAAGITQKSLENILCK 702
           +  +L+P+EEA+    LKE  R+E+ R  + +  + E TS Q AKA G+  +S++ +LCK
Sbjct: 140 RYEHLSPREEAECCLSLKEGARLESERFRVVEAQKHEPTSKQLAKAMGMKMRSIDKVLCK 199

Query: 701 GRESQERICSCYQRLVISVATSYQGKGLSLKDLIQEGRIGLIRGAIRFNPKRGCKLSTYA 522
            RESQE+I   Y+ LV+SVA+SYQGKGLS +DLIQEG IGL+RGA +F+ +R  KLSTY 
Sbjct: 200 RRESQEKIIRSYRGLVVSVASSYQGKGLSFQDLIQEGSIGLLRGAEKFDHERKWKLSTYV 259

Query: 521 YWWIRQAITRAIANKSRIFRMPG 453
           YWWIRQAI RAI NKSRI R+PG
Sbjct: 260 YWWIRQAIIRAIENKSRIIRLPG 282



 Score =  107 bits (267), Expect(3) = 2e-70
 Identities = 53/82 (64%), Positives = 67/82 (81%)
 Frame = -3

Query: 246 DIIPGPQETTPEAMEKKEMVKREMQKLLNMLCDREANVLRLHYGLNGCTPWSFEEIGNLF 67
           +II GP+E  PE M  ++++K+E++KLL  L DREANVLRLH+GLNG +P SFEEIG L 
Sbjct: 349 EIIQGPEEMMPEKMLIRQLMKQEVEKLLKTLSDREANVLRLHFGLNGESPQSFEEIGRLL 408

Query: 66  KLSRERIRQINSTALSKLQRTS 1
           KLSRER+RQIN  ALSKL++TS
Sbjct: 409 KLSRERVRQINGIALSKLRQTS 430



 Score = 48.5 bits (114), Expect(3) = 2e-70
 Identities = 25/62 (40%), Positives = 38/62 (61%)
 Frame = -2

Query: 454 GSISELVPKICEANNSLSRRLQRYPTYDEXXXXXXXXXXXVRLALERNRSPISLDQAISS 275
           G +  ++ KI +A NSL++RLQR P++DE           V+L  ER+R PISLD+  + 
Sbjct: 282 GHVCGMMAKITKAQNSLNQRLQRLPSHDELAEVIKVNASTVKLVCERSRPPISLDRVATV 341

Query: 274 QG 269
           +G
Sbjct: 342 RG 343


>ref|XP_007219201.1| hypothetical protein PRUPE_ppa017025mg [Prunus persica]
           gi|462415663|gb|EMJ20400.1| hypothetical protein
           PRUPE_ppa017025mg [Prunus persica]
          Length = 440

 Score =  160 bits (404), Expect(3) = 7e-70
 Identities = 81/143 (56%), Positives = 106/143 (74%)
 Frame = -1

Query: 881 KQSYLTPKEEAKFSWYLKERERVEAVRKGISDMGEQELTSSQWAKAAGITQKSLENILCK 702
           +  +L+P+EEA+    LKE  R+E+ R  + +  + E TS Q AKA G+  +S++ +LCK
Sbjct: 140 RYEHLSPREEAECCLSLKEGARLESERFRVVEAQKHEPTSKQLAKAMGMKMRSIDKVLCK 199

Query: 701 GRESQERICSCYQRLVISVATSYQGKGLSLKDLIQEGRIGLIRGAIRFNPKRGCKLSTYA 522
            RESQE+I   Y+ LV+SVA+SYQGKGLS +DLIQEG IGL+RGA +F+ +R  KLSTY 
Sbjct: 200 RRESQEKIIRSYRGLVVSVASSYQGKGLSFQDLIQEGSIGLLRGAEKFDHEREWKLSTYV 259

Query: 521 YWWIRQAITRAIANKSRIFRMPG 453
           YWWIRQAI RAI NKSRI R+PG
Sbjct: 260 YWWIRQAIIRAIENKSRIIRLPG 282



 Score =  107 bits (267), Expect(3) = 7e-70
 Identities = 53/82 (64%), Positives = 67/82 (81%)
 Frame = -3

Query: 246 DIIPGPQETTPEAMEKKEMVKREMQKLLNMLCDREANVLRLHYGLNGCTPWSFEEIGNLF 67
           +II GP+E  PE M  ++++K+E++KLL  L DREANVLRLH+GLNG +P SFEEIG L 
Sbjct: 349 EIIQGPEEMMPEKMLIRQLMKQEVEKLLKTLSDREANVLRLHFGLNGESPQSFEEIGRLL 408

Query: 66  KLSRERIRQINSTALSKLQRTS 1
           KLSRER+RQIN  ALSKL++TS
Sbjct: 409 KLSRERVRQINGIALSKLRQTS 430



 Score = 47.0 bits (110), Expect(3) = 7e-70
 Identities = 24/62 (38%), Positives = 37/62 (59%)
 Frame = -2

Query: 454 GSISELVPKICEANNSLSRRLQRYPTYDEXXXXXXXXXXXVRLALERNRSPISLDQAISS 275
           G +  ++ KI +A NSL++R QR P++DE           V+L  ER+R PISLD+  + 
Sbjct: 282 GHVCGMMAKITKAQNSLNQRFQRLPSHDEIAEVIKVNASTVKLVCERSRPPISLDRVATV 341

Query: 274 QG 269
           +G
Sbjct: 342 RG 343


>ref|XP_009354359.1| PREDICTED: RNA polymerase sigma factor sigD, chloroplastic [Pyrus x
           bretschneideri]
          Length = 436

 Score =  162 bits (410), Expect(3) = 7e-70
 Identities = 82/139 (58%), Positives = 105/139 (75%)
 Frame = -1

Query: 872 YLTPKEEAKFSWYLKERERVEAVRKGISDMGEQELTSSQWAKAAGITQKSLENILCKGRE 693
           +L+ KEEA+    LKE  R+E+ R  + +  EQE TS Q AKA G+  +S++ +LCK RE
Sbjct: 139 HLSSKEEAECCLSLKEGARLESRRLRVVEDEEQEPTSKQLAKAMGMKTRSIDKVLCKKRE 198

Query: 692 SQERICSCYQRLVISVATSYQGKGLSLKDLIQEGRIGLIRGAIRFNPKRGCKLSTYAYWW 513
           SQERI   Y+ L++SVA+SYQGKGLS +DLIQEG IGL+RGA +F+ +RGCKLSTY YWW
Sbjct: 199 SQERIIRSYRGLIVSVASSYQGKGLSFQDLIQEGSIGLLRGAEKFDHERGCKLSTYVYWW 258

Query: 512 IRQAITRAIANKSRIFRMP 456
           IRQAI RA+  KSRI R+P
Sbjct: 259 IRQAIIRALDKKSRIIRLP 277



 Score =  101 bits (251), Expect(3) = 7e-70
 Identities = 51/82 (62%), Positives = 65/82 (79%)
 Frame = -3

Query: 246 DIIPGPQETTPEAMEKKEMVKREMQKLLNMLCDREANVLRLHYGLNGCTPWSFEEIGNLF 67
           +I+ GP+E  PE M  K+++K+E++KLL  L DREA VLRL +GL+G TP SFEEIG L 
Sbjct: 345 EIMQGPEEMMPEKMLTKQLMKQEVEKLLKTLSDREAYVLRLRFGLHGETPKSFEEIGRLL 404

Query: 66  KLSRERIRQINSTALSKLQRTS 1
           KLSRER+RQIN  ALSKL++TS
Sbjct: 405 KLSRERVRQINGIALSKLKQTS 426



 Score = 50.8 bits (120), Expect(3) = 7e-70
 Identities = 25/57 (43%), Positives = 36/57 (63%)
 Frame = -2

Query: 439 LVPKICEANNSLSRRLQRYPTYDEXXXXXXXXXXXVRLALERNRSPISLDQAISSQG 269
           ++ KI +A NS ++R+QR PTYDE           V+L  ER+R PISLD+ ++ QG
Sbjct: 283 MMAKITKAKNSFNQRIQRLPTYDEIAQEVNVHAATVKLVCERSRPPISLDRVVTVQG 339