BLASTX nr result

ID: Forsythia22_contig00022412 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Forsythia22_contig00022412
         (779 letters)

Database: ./nr 
           69,698,275 sequences; 24,982,196,650 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_011079992.1| PREDICTED: DNA-directed RNA polymerase III s...   237   2e-73
emb|CDP03695.1| unnamed protein product [Coffea canephora]            194   2e-60
ref|XP_002271507.2| PREDICTED: DNA-directed RNA polymerase III s...   190   3e-59
ref|XP_002281971.1| PREDICTED: DNA-directed RNA polymerase III s...   188   1e-58
ref|XP_012831638.1| PREDICTED: DNA-directed RNA polymerase III s...   187   1e-57
ref|XP_009784879.1| PREDICTED: DNA-directed RNA polymerase III s...   184   1e-56
ref|XP_004242644.1| PREDICTED: DNA-directed RNA polymerase III s...   182   2e-56
ref|XP_006343568.1| PREDICTED: DNA-directed RNA polymerase III s...   181   2e-56
ref|XP_009600427.1| PREDICTED: DNA-directed RNA polymerase III s...   180   1e-55
ref|XP_010323226.1| PREDICTED: DNA-directed RNA polymerase III s...   176   2e-54
ref|XP_010278155.1| PREDICTED: DNA-directed RNA polymerase III s...   169   1e-51
ref|XP_010265332.1| PREDICTED: DNA-directed RNA polymerase III s...   169   1e-51
ref|XP_010087136.1| DNA-directed RNA polymerase III subunit rpc8...   174   1e-50
ref|XP_006479590.1| PREDICTED: DNA-directed RNA polymerase III s...   161   5e-49
ref|XP_006479592.1| PREDICTED: DNA-directed RNA polymerase III s...   161   5e-49
ref|XP_006443913.1| hypothetical protein CICLE_v10023915mg, part...   161   5e-49
ref|XP_010542701.1| PREDICTED: DNA-directed RNA polymerase III s...   160   3e-48
ref|XP_011079993.1| PREDICTED: DNA-directed RNA polymerase III s...   197   8e-48
ref|XP_007050414.1| RNA polymerase Rpb7 N-terminal domain-contai...   156   1e-47
gb|KCW84674.1| hypothetical protein EUGRSUZ_B01492 [Eucalyptus g...   162   4e-47

>ref|XP_011079992.1| PREDICTED: DNA-directed RNA polymerase III subunit RPC8 isoform X1
           [Sesamum indicum]
          Length = 203

 Score =  237 bits (605), Expect(2) = 2e-73
 Identities = 109/139 (78%), Positives = 123/139 (88%)
 Frame = -1

Query: 419 LPRQGXXXXXYDILSIDGGFIFPGDGASTYTARFRLVMFRPYVGEVISARLKESTKDGLR 240
           + + G     YDI SIDGGFIFPGDGASTYT RFRLVMFRP+VGEVISARLKES+KDGLR
Sbjct: 39  IEKLGLCVSVYDIRSIDGGFIFPGDGASTYTVRFRLVMFRPFVGEVISARLKESSKDGLR 98

Query: 239 LSLGFFDDIYVPVPLMPNPYHTEPDPEHKNGTRWVWEYMGENYPIDWADEIRFRVHTVNY 60
           LSLGFFDDIYVPVPL+ +P H+EPDPEHKNG RWVWEY GENYPID  DEIRFRVH V+Y
Sbjct: 99  LSLGFFDDIYVPVPLLASPNHSEPDPEHKNGIRWVWEYEGENYPIDGTDEIRFRVHNVSY 158

Query: 59  PPLPVEQGKDSEQKDSEEK 3
           PP+P+EQGKDS++K+SE+K
Sbjct: 159 PPVPLEQGKDSDEKESEQK 177



 Score = 67.0 bits (162), Expect(2) = 2e-73
 Identities = 32/38 (84%), Positives = 35/38 (92%)
 Frame = -2

Query: 517 MFVMSEIEHTLRLPPHLLNCPLNAAIKGELESLFLDKV 404
           MF +SEIEHTLRLPP+LLN PLN AIKGEL+SLFLDKV
Sbjct: 1   MFFLSEIEHTLRLPPYLLNRPLNEAIKGELDSLFLDKV 38


>emb|CDP03695.1| unnamed protein product [Coffea canephora]
          Length = 193

 Score =  194 bits (492), Expect(2) = 2e-60
 Identities = 89/132 (67%), Positives = 105/132 (79%)
 Frame = -1

Query: 419 LPRQGXXXXXYDILSIDGGFIFPGDGASTYTARFRLVMFRPYVGEVISARLKESTKDGLR 240
           + + G     YDI SIDGGFIFPGDGASTYT RFRL+MFRP++GEVISARLKES+  GLR
Sbjct: 39  IAKLGLCISVYDIRSIDGGFIFPGDGASTYTVRFRLLMFRPFLGEVISARLKESSSTGLR 98

Query: 239 LSLGFFDDIYVPVPLMPNPYHTEPDPEHKNGTRWVWEYMGENYPIDWADEIRFRVHTVNY 60
           LSLGFFDDIY+P  L+P+P H EPDPE KN  RW+WE+  +NYPID  DEIRFRVH++ Y
Sbjct: 99  LSLGFFDDIYIPRALLPSPSHDEPDPEDKNQVRWIWEFNEQNYPIDGMDEIRFRVHSIQY 158

Query: 59  PPLPVEQGKDSE 24
           P LP+EQ   S+
Sbjct: 159 PSLPLEQDDGSK 170



 Score = 66.6 bits (161), Expect(2) = 2e-60
 Identities = 32/38 (84%), Positives = 33/38 (86%)
 Frame = -2

Query: 517 MFVMSEIEHTLRLPPHLLNCPLNAAIKGELESLFLDKV 404
           MF +SEIEHTLRLPPHLLN PL  AIKGELE LFLDKV
Sbjct: 1   MFCLSEIEHTLRLPPHLLNLPLAEAIKGELEGLFLDKV 38


>ref|XP_002271507.2| PREDICTED: DNA-directed RNA polymerase III subunit RPC8 [Vitis
           vinifera] gi|296086693|emb|CBI32328.3| unnamed protein
           product [Vitis vinifera]
          Length = 192

 Score =  190 bits (483), Expect(2) = 3e-59
 Identities = 86/132 (65%), Positives = 106/132 (80%)
 Frame = -1

Query: 419 LPRQGXXXXXYDILSIDGGFIFPGDGASTYTARFRLVMFRPYVGEVISARLKESTKDGLR 240
           L   G     YDI SIDGGF+FPGDGASTYT  FRLVMFRP+VGE+I+A+LKES  +GL+
Sbjct: 39  LANLGLCISVYDIRSIDGGFVFPGDGASTYTVEFRLVMFRPFVGEIITAKLKESDANGLQ 98

Query: 239 LSLGFFDDIYVPVPLMPNPYHTEPDPEHKNGTRWVWEYMGENYPIDWADEIRFRVHTVNY 60
           LSLGFFDDIY+PV LMPNP H EPDPE+K+   W+W+Y  + +PID  DEIRF+V +V+Y
Sbjct: 99  LSLGFFDDIYIPVHLMPNPCHCEPDPENKSQVIWIWDYQEQKFPIDGLDEIRFQVQSVSY 158

Query: 59  PPLPVEQGKDSE 24
           PP+PVEQ K+S+
Sbjct: 159 PPIPVEQPKESK 170



 Score = 66.2 bits (160), Expect(2) = 3e-59
 Identities = 32/38 (84%), Positives = 34/38 (89%)
 Frame = -2

Query: 517 MFVMSEIEHTLRLPPHLLNCPLNAAIKGELESLFLDKV 404
           MF +S IEHTLRLPPHLL+ PLN AIKGELESLFLDKV
Sbjct: 1   MFFLSLIEHTLRLPPHLLDLPLNEAIKGELESLFLDKV 38


>ref|XP_002281971.1| PREDICTED: DNA-directed RNA polymerase III subunit RPC8 [Vitis
           vinifera] gi|297735498|emb|CBI17938.3| unnamed protein
           product [Vitis vinifera]
          Length = 192

 Score =  188 bits (478), Expect(2) = 1e-58
 Identities = 85/128 (66%), Positives = 103/128 (80%)
 Frame = -1

Query: 407 GXXXXXYDILSIDGGFIFPGDGASTYTARFRLVMFRPYVGEVISARLKESTKDGLRLSLG 228
           G     YDI SIDGGF+FPGDGASTYT  FRLVMFRP+VGE+I+A+LKES  +GLRLSLG
Sbjct: 43  GLCISVYDIRSIDGGFVFPGDGASTYTVEFRLVMFRPFVGEIITAKLKESDANGLRLSLG 102

Query: 227 FFDDIYVPVPLMPNPYHTEPDPEHKNGTRWVWEYMGENYPIDWADEIRFRVHTVNYPPLP 48
           FFDDIY+PV LMPNP H EP+PE K    W+W+Y  + +PID  DEIRF+V +V+YPP+P
Sbjct: 103 FFDDIYIPVHLMPNPCHCEPNPEKKGQVIWIWDYQEQKFPIDGIDEIRFQVQSVSYPPIP 162

Query: 47  VEQGKDSE 24
           VEQ K+S+
Sbjct: 163 VEQPKESK 170



 Score = 66.2 bits (160), Expect(2) = 1e-58
 Identities = 32/38 (84%), Positives = 34/38 (89%)
 Frame = -2

Query: 517 MFVMSEIEHTLRLPPHLLNCPLNAAIKGELESLFLDKV 404
           MF +S IEHTLRLPPHLL+ PLN AIKGELESLFLDKV
Sbjct: 1   MFYLSLIEHTLRLPPHLLDLPLNEAIKGELESLFLDKV 38


>ref|XP_012831638.1| PREDICTED: DNA-directed RNA polymerase III subunit RPC8
           [Erythranthe guttatus] gi|604348349|gb|EYU46504.1|
           hypothetical protein MIMGU_mgv1a014157mg [Erythranthe
           guttata]
          Length = 199

 Score =  187 bits (475), Expect(2) = 1e-57
 Identities = 91/139 (65%), Positives = 104/139 (74%), Gaps = 2/139 (1%)
 Frame = -1

Query: 419 LPRQGXXXXXYDILSIDGGFIFPGDGASTYTARFRLVMFRPYVGEVISARLKESTKDGLR 240
           + + G     YDI SIDGGFIFPG GASTYT +FRLVMFRP++GEVISARLKEST  GLR
Sbjct: 39  IDKLGLCISVYDIRSIDGGFIFPGHGASTYTVKFRLVMFRPFLGEVISARLKESTTSGLR 98

Query: 239 LSLGFFDDIYVPVPLMPNPYHTEPDPEHKNGTRWVWEYMGENYPIDWADEIRFRVHTVNY 60
           LSLGFFDDIYV VPL+P P    PDP  K+G  W W Y  +   IDW DEIRF+VH+VNY
Sbjct: 99  LSLGFFDDIYVYVPLLPAPNDYAPDPSRKDGVIWSWNYHADPLTIDWTDEIRFKVHSVNY 158

Query: 59  PPLPVEQGKDS--EQKDSE 9
            P+PVEQG D   E+KDS+
Sbjct: 159 HPIPVEQGDDDDPEKKDSK 177



 Score = 63.9 bits (154), Expect(2) = 1e-57
 Identities = 30/38 (78%), Positives = 34/38 (89%)
 Frame = -2

Query: 517 MFVMSEIEHTLRLPPHLLNCPLNAAIKGELESLFLDKV 404
           MF +SE+EH+LRLPPHLLN PL+ AIKGELESLFLD V
Sbjct: 1   MFFLSELEHSLRLPPHLLNQPLDKAIKGELESLFLDTV 38


>ref|XP_009784879.1| PREDICTED: DNA-directed RNA polymerase III subunit RPC8 [Nicotiana
           sylvestris] gi|698474891|ref|XP_009784880.1| PREDICTED:
           DNA-directed RNA polymerase III subunit RPC8 [Nicotiana
           sylvestris]
          Length = 194

 Score =  184 bits (466), Expect(2) = 1e-56
 Identities = 84/129 (65%), Positives = 107/129 (82%), Gaps = 1/129 (0%)
 Frame = -1

Query: 407 GXXXXXYDILSIDGGFIFPGDGASTYTARFRLVMFRPYVGEVISARLKESTKDGLRLSLG 228
           G     YDI SIDGGFI+ G+GASTYT +FRL++FRP+VGEVI A+LKES  +GLRLSLG
Sbjct: 43  GLCVSVYDIRSIDGGFIYAGEGASTYTVKFRLIVFRPFVGEVIVAKLKESNTEGLRLSLG 102

Query: 227 FFDDIYVPVPLMPNPYHTEPDPEHKNGTRWVWEYMGEN-YPIDWADEIRFRVHTVNYPPL 51
           FF+DIYVP PLMP+P  +EPDPE+KN  RW+W++ G++ YPID  DEIRF+VH+V+YP +
Sbjct: 103 FFNDIYVPPPLMPSPSRSEPDPENKNQVRWIWQFEGQDEYPIDGVDEIRFQVHSVSYPSV 162

Query: 50  PVEQGKDSE 24
           P+EQ KDS+
Sbjct: 163 PLEQEKDSK 171



 Score = 64.3 bits (155), Expect(2) = 1e-56
 Identities = 29/38 (76%), Positives = 34/38 (89%)
 Frame = -2

Query: 517 MFVMSEIEHTLRLPPHLLNCPLNAAIKGELESLFLDKV 404
           MF +SEIEHTLRLPPHLL+ PLN +I+GELE LF+DKV
Sbjct: 1   MFYLSEIEHTLRLPPHLLSLPLNESIRGELEGLFVDKV 38


>ref|XP_004242644.1| PREDICTED: DNA-directed RNA polymerase III subunit RPC8 isoform X2
           [Solanum lycopersicum]
          Length = 193

 Score =  182 bits (462), Expect(2) = 2e-56
 Identities = 82/128 (64%), Positives = 103/128 (80%)
 Frame = -1

Query: 407 GXXXXXYDILSIDGGFIFPGDGASTYTARFRLVMFRPYVGEVISARLKESTKDGLRLSLG 228
           G     YDI S+D GFI+P +GASTY  +FRLV+FRP+VGEVISA+LKES  +GLRLSLG
Sbjct: 43  GLGISIYDIRSVDDGFIYPSEGASTYKVKFRLVVFRPFVGEVISAKLKESNAEGLRLSLG 102

Query: 227 FFDDIYVPVPLMPNPYHTEPDPEHKNGTRWVWEYMGENYPIDWADEIRFRVHTVNYPPLP 48
           FFDDIYVP PL+P+P  +EPDPE+KN  RW+W++   +YPID  DEIRF+VH V+YP +P
Sbjct: 103 FFDDIYVPAPLLPDPSRSEPDPENKNQVRWIWKFDELDYPIDGIDEIRFQVHNVSYPSMP 162

Query: 47  VEQGKDSE 24
           +EQ KDS+
Sbjct: 163 LEQDKDSK 170



 Score = 65.1 bits (157), Expect(2) = 2e-56
 Identities = 30/38 (78%), Positives = 33/38 (86%)
 Frame = -2

Query: 517 MFVMSEIEHTLRLPPHLLNCPLNAAIKGELESLFLDKV 404
           MF +S +EHTLRLPPHLLN PLN AIKGELE LF+DKV
Sbjct: 1   MFYLSVLEHTLRLPPHLLNLPLNEAIKGELEGLFVDKV 38


>ref|XP_006343568.1| PREDICTED: DNA-directed RNA polymerase III subunit RPC8-like
           [Solanum tuberosum]
          Length = 193

 Score =  181 bits (459), Expect(2) = 2e-56
 Identities = 82/127 (64%), Positives = 102/127 (80%)
 Frame = -1

Query: 407 GXXXXXYDILSIDGGFIFPGDGASTYTARFRLVMFRPYVGEVISARLKESTKDGLRLSLG 228
           G     YDI SID GFI+P +GASTYT +FRLV+FRP+VGEVI+A+LKES  +GLRLSLG
Sbjct: 43  GLIISIYDIRSIDDGFIYPSEGASTYTVKFRLVVFRPFVGEVITAKLKESKAEGLRLSLG 102

Query: 227 FFDDIYVPVPLMPNPYHTEPDPEHKNGTRWVWEYMGENYPIDWADEIRFRVHTVNYPPLP 48
           FFDDIYVP PL+P+P  + PDPE+KN  RW+W++   +YPID  DEIRF+VH V+YP +P
Sbjct: 103 FFDDIYVPAPLLPDPSRSAPDPENKNQVRWIWKFDELDYPIDGVDEIRFQVHNVSYPSMP 162

Query: 47  VEQGKDS 27
           +EQ KDS
Sbjct: 163 LEQDKDS 169



 Score = 66.2 bits (160), Expect(2) = 2e-56
 Identities = 31/38 (81%), Positives = 33/38 (86%)
 Frame = -2

Query: 517 MFVMSEIEHTLRLPPHLLNCPLNAAIKGELESLFLDKV 404
           MF +SEIEH LRLPPHLLN PLN AIKGELE LF+DKV
Sbjct: 1   MFYLSEIEHKLRLPPHLLNLPLNEAIKGELEGLFVDKV 38


>ref|XP_009600427.1| PREDICTED: DNA-directed RNA polymerase III subunit RPC8 [Nicotiana
           tomentosiformis]
          Length = 194

 Score =  180 bits (457), Expect(2) = 1e-55
 Identities = 83/129 (64%), Positives = 106/129 (82%), Gaps = 1/129 (0%)
 Frame = -1

Query: 407 GXXXXXYDILSIDGGFIFPGDGASTYTARFRLVMFRPYVGEVISARLKESTKDGLRLSLG 228
           G     YDI SIDGGFI+ G+GASTYT +FRL++FRP+VGEVI+A+LKES  +GLRLSLG
Sbjct: 43  GLCISVYDIRSIDGGFIYAGEGASTYTVKFRLIVFRPFVGEVIAAKLKESNAEGLRLSLG 102

Query: 227 FFDDIYVPVPLMPNPYHTEPDPEHKNGTRWVWEYMGEN-YPIDWADEIRFRVHTVNYPPL 51
           FF+DIYVP PLMP+P  +E DPE+KN  RW+W++ G++ YPID  DEIRF+VH+V+YP  
Sbjct: 103 FFNDIYVPPPLMPSPSRSELDPENKNQVRWIWQFEGQDEYPIDGVDEIRFQVHSVSYPSA 162

Query: 50  PVEQGKDSE 24
           P+EQ KDS+
Sbjct: 163 PLEQEKDSK 171



 Score = 64.3 bits (155), Expect(2) = 1e-55
 Identities = 29/38 (76%), Positives = 34/38 (89%)
 Frame = -2

Query: 517 MFVMSEIEHTLRLPPHLLNCPLNAAIKGELESLFLDKV 404
           MF +SEIEHTLRLPPHLL+ PLN +I+GELE LF+DKV
Sbjct: 1   MFYLSEIEHTLRLPPHLLSLPLNESIRGELEGLFVDKV 38


>ref|XP_010323226.1| PREDICTED: DNA-directed RNA polymerase III subunit RPC8 isoform X1
           [Solanum lycopersicum]
          Length = 199

 Score =  176 bits (445), Expect(2) = 2e-54
 Identities = 82/134 (61%), Positives = 103/134 (76%), Gaps = 6/134 (4%)
 Frame = -1

Query: 407 GXXXXXYDILSIDGGFIFPGDGASTYTARFRLVMFRPYVGEVISARLKESTKDGLR---- 240
           G     YDI S+D GFI+P +GASTY  +FRLV+FRP+VGEVISA+LKES  +GLR    
Sbjct: 43  GLGISIYDIRSVDDGFIYPSEGASTYKVKFRLVVFRPFVGEVISAKLKESNAEGLRCKRR 102

Query: 239 --LSLGFFDDIYVPVPLMPNPYHTEPDPEHKNGTRWVWEYMGENYPIDWADEIRFRVHTV 66
             LSLGFFDDIYVP PL+P+P  +EPDPE+KN  RW+W++   +YPID  DEIRF+VH V
Sbjct: 103 RMLSLGFFDDIYVPAPLLPDPSRSEPDPENKNQVRWIWKFDELDYPIDGIDEIRFQVHNV 162

Query: 65  NYPPLPVEQGKDSE 24
           +YP +P+EQ KDS+
Sbjct: 163 SYPSMPLEQDKDSK 176



 Score = 65.1 bits (157), Expect(2) = 2e-54
 Identities = 30/38 (78%), Positives = 33/38 (86%)
 Frame = -2

Query: 517 MFVMSEIEHTLRLPPHLLNCPLNAAIKGELESLFLDKV 404
           MF +S +EHTLRLPPHLLN PLN AIKGELE LF+DKV
Sbjct: 1   MFYLSVLEHTLRLPPHLLNLPLNEAIKGELEGLFVDKV 38


>ref|XP_010278155.1| PREDICTED: DNA-directed RNA polymerase III subunit RPC8-like
           [Nelumbo nucifera] gi|720071765|ref|XP_010278156.1|
           PREDICTED: DNA-directed RNA polymerase III subunit
           RPC8-like [Nelumbo nucifera]
          Length = 193

 Score =  169 bits (429), Expect(2) = 1e-51
 Identities = 75/132 (56%), Positives = 99/132 (75%)
 Frame = -1

Query: 419 LPRQGXXXXXYDILSIDGGFIFPGDGASTYTARFRLVMFRPYVGEVISARLKESTKDGLR 240
           +P  G     YDI  I  GFI+PGDGASTYT +FRLVMFRP+VGE+I  +LK S  +GL+
Sbjct: 39  IPNLGLCISIYDIRDIKDGFIYPGDGASTYTVQFRLVMFRPFVGEIIVGKLKSSDANGLK 98

Query: 239 LSLGFFDDIYVPVPLMPNPYHTEPDPEHKNGTRWVWEYMGENYPIDWADEIRFRVHTVNY 60
           LS+ FFDDI++PV L+PNP    P+PE+K+   W WE+  E YPID  DEIRFRVH+++Y
Sbjct: 99  LSISFFDDIHIPVHLLPNPSSLMPNPENKHQGVWSWEFQDEQYPIDGKDEIRFRVHSISY 158

Query: 59  PPLPVEQGKDSE 24
           PP+P+EQ K+++
Sbjct: 159 PPIPIEQEKEAK 170



 Score = 62.0 bits (149), Expect(2) = 1e-51
 Identities = 30/38 (78%), Positives = 33/38 (86%)
 Frame = -2

Query: 517 MFVMSEIEHTLRLPPHLLNCPLNAAIKGELESLFLDKV 404
           MF +S IEHTL LPPHLLN PL+ AIKGELE+LFLDKV
Sbjct: 1   MFFLSLIEHTLCLPPHLLNLPLDEAIKGELETLFLDKV 38


>ref|XP_010265332.1| PREDICTED: DNA-directed RNA polymerase III subunit RPC8-like
           [Nelumbo nucifera] gi|720029819|ref|XP_010265333.1|
           PREDICTED: DNA-directed RNA polymerase III subunit
           RPC8-like [Nelumbo nucifera]
           gi|720029822|ref|XP_010265334.1| PREDICTED: DNA-directed
           RNA polymerase III subunit RPC8-like [Nelumbo nucifera]
           gi|720029825|ref|XP_010265335.1| PREDICTED: DNA-directed
           RNA polymerase III subunit RPC8-like [Nelumbo nucifera]
          Length = 193

 Score =  169 bits (427), Expect(2) = 1e-51
 Identities = 75/132 (56%), Positives = 98/132 (74%)
 Frame = -1

Query: 419 LPRQGXXXXXYDILSIDGGFIFPGDGASTYTARFRLVMFRPYVGEVISARLKESTKDGLR 240
           +P  G     YDI  I  GFI+PGDGASTYT +FRL+MFRP+VGE+I  +LK S  +GL 
Sbjct: 39  IPNLGLCISIYDIGDIKDGFIYPGDGASTYTVQFRLIMFRPFVGEIIVGKLKSSDANGLN 98

Query: 239 LSLGFFDDIYVPVPLMPNPYHTEPDPEHKNGTRWVWEYMGENYPIDWADEIRFRVHTVNY 60
           LS+GFFDDI++PV L+PNP     DPE+K+   W WE+  E YPID  DEIRFRVH+++Y
Sbjct: 99  LSVGFFDDIHIPVHLLPNPSSLTLDPENKHEGIWTWEFQDEQYPIDGKDEIRFRVHSISY 158

Query: 59  PPLPVEQGKDSE 24
           PP+P+EQ K+++
Sbjct: 159 PPIPIEQEKEAK 170



 Score = 62.8 bits (151), Expect(2) = 1e-51
 Identities = 30/38 (78%), Positives = 33/38 (86%)
 Frame = -2

Query: 517 MFVMSEIEHTLRLPPHLLNCPLNAAIKGELESLFLDKV 404
           MF +S IEHTLRLPPHLL  PL+ AIKGELE+LFLDKV
Sbjct: 1   MFFLSLIEHTLRLPPHLLKLPLDEAIKGELEALFLDKV 38


>ref|XP_010087136.1| DNA-directed RNA polymerase III subunit rpc8 [Morus notabilis]
           gi|587835807|gb|EXB26576.1| DNA-directed RNA polymerase
           III subunit rpc8 [Morus notabilis]
          Length = 200

 Score =  174 bits (441), Expect(2) = 1e-50
 Identities = 76/128 (59%), Positives = 101/128 (78%)
 Frame = -1

Query: 407 GXXXXXYDILSIDGGFIFPGDGASTYTARFRLVMFRPYVGEVISARLKESTKDGLRLSLG 228
           G     YDI+SI+GGFIFPGDGA+TYTA F ++MFRP+VGE+ISA++KES  +GLRL+LG
Sbjct: 43  GLCISVYDIISIEGGFIFPGDGAATYTAVFTMIMFRPFVGEIISAKVKESDANGLRLTLG 102

Query: 227 FFDDIYVPVPLMPNPYHTEPDPEHKNGTRWVWEYMGENYPIDWADEIRFRVHTVNYPPLP 48
           FF+DIY+P   +P+P   EPDP  ++   W+WE+  + Y ID  DEIRF+VH+VNYPP+P
Sbjct: 103 FFEDIYIPANFLPDPSRPEPDPRKRDRVTWIWEFGEQKYVIDGEDEIRFQVHSVNYPPIP 162

Query: 47  VEQGKDSE 24
           VEQ K+S+
Sbjct: 163 VEQPKESK 170



 Score = 53.9 bits (128), Expect(2) = 1e-50
 Identities = 26/38 (68%), Positives = 30/38 (78%)
 Frame = -2

Query: 517 MFVMSEIEHTLRLPPHLLNCPLNAAIKGELESLFLDKV 404
           MF +S IEHTLR+PP +L+ PL  AIK ELE LFLDKV
Sbjct: 1   MFYLSRIEHTLRVPPDILSRPLTEAIKVELEKLFLDKV 38


>ref|XP_006479590.1| PREDICTED: DNA-directed RNA polymerase III subunit RPC8-like
           isoform X1 [Citrus sinensis]
           gi|568851835|ref|XP_006479591.1| PREDICTED: DNA-directed
           RNA polymerase III subunit RPC8-like isoform X2 [Citrus
           sinensis] gi|641849659|gb|KDO68533.1| hypothetical
           protein CISIN_1g029495mg [Citrus sinensis]
           gi|641849660|gb|KDO68534.1| hypothetical protein
           CISIN_1g029495mg [Citrus sinensis]
          Length = 192

 Score =  161 bits (408), Expect(2) = 5e-49
 Identities = 72/128 (56%), Positives = 98/128 (76%)
 Frame = -1

Query: 407 GXXXXXYDILSIDGGFIFPGDGASTYTARFRLVMFRPYVGEVISARLKESTKDGLRLSLG 228
           G     YDI  I+GGF++PG+GAST+T +FRLV+FRP+VGE+I+A+LKES  +GLRLSLG
Sbjct: 43  GLCISIYDIKEIEGGFVYPGEGASTHTVKFRLVVFRPFVGEIIAAKLKESDANGLRLSLG 102

Query: 227 FFDDIYVPVPLMPNPYHTEPDPEHKNGTRWVWEYMGENYPIDWADEIRFRVHTVNYPPLP 48
           FF+DIYVP  L+P+P  +EPDP  +   +W+WE+    Y ID  DEI+FRV +VNYP +P
Sbjct: 103 FFEDIYVPSHLLPSPSRSEPDPYGRYEVKWIWEFGDTKYVIDGLDEIKFRVLSVNYPSIP 162

Query: 47  VEQGKDSE 24
           +EQ + S+
Sbjct: 163 IEQAEGSK 170



 Score = 61.2 bits (147), Expect(2) = 5e-49
 Identities = 29/38 (76%), Positives = 33/38 (86%)
 Frame = -2

Query: 517 MFVMSEIEHTLRLPPHLLNCPLNAAIKGELESLFLDKV 404
           MF +S+IEHTLRLPPHLL  PLN AIK ELE++FLDKV
Sbjct: 1   MFYLSKIEHTLRLPPHLLRLPLNEAIKLELENVFLDKV 38


>ref|XP_006479592.1| PREDICTED: DNA-directed RNA polymerase III subunit RPC8-like
           isoform X3 [Citrus sinensis]
          Length = 187

 Score =  161 bits (408), Expect(2) = 5e-49
 Identities = 72/128 (56%), Positives = 98/128 (76%)
 Frame = -1

Query: 407 GXXXXXYDILSIDGGFIFPGDGASTYTARFRLVMFRPYVGEVISARLKESTKDGLRLSLG 228
           G     YDI  I+GGF++PG+GAST+T +FRLV+FRP+VGE+I+A+LKES  +GLRLSLG
Sbjct: 43  GLCISIYDIKEIEGGFVYPGEGASTHTVKFRLVVFRPFVGEIIAAKLKESDANGLRLSLG 102

Query: 227 FFDDIYVPVPLMPNPYHTEPDPEHKNGTRWVWEYMGENYPIDWADEIRFRVHTVNYPPLP 48
           FF+DIYVP  L+P+P  +EPDP  +   +W+WE+    Y ID  DEI+FRV +VNYP +P
Sbjct: 103 FFEDIYVPSHLLPSPSRSEPDPYGRYEVKWIWEFGDTKYVIDGLDEIKFRVLSVNYPSIP 162

Query: 47  VEQGKDSE 24
           +EQ + S+
Sbjct: 163 IEQAEGSK 170



 Score = 61.2 bits (147), Expect(2) = 5e-49
 Identities = 29/38 (76%), Positives = 33/38 (86%)
 Frame = -2

Query: 517 MFVMSEIEHTLRLPPHLLNCPLNAAIKGELESLFLDKV 404
           MF +S+IEHTLRLPPHLL  PLN AIK ELE++FLDKV
Sbjct: 1   MFYLSKIEHTLRLPPHLLRLPLNEAIKLELENVFLDKV 38


>ref|XP_006443913.1| hypothetical protein CICLE_v10023915mg, partial [Citrus clementina]
           gi|557546175|gb|ESR57153.1| hypothetical protein
           CICLE_v10023915mg, partial [Citrus clementina]
          Length = 178

 Score =  161 bits (408), Expect(2) = 5e-49
 Identities = 72/128 (56%), Positives = 98/128 (76%)
 Frame = -1

Query: 407 GXXXXXYDILSIDGGFIFPGDGASTYTARFRLVMFRPYVGEVISARLKESTKDGLRLSLG 228
           G     YDI  I+GGF++PG+GAST+T +FRLV+FRP+VGE+I+A+LKES  +GLRLSLG
Sbjct: 43  GLCISIYDIKEIEGGFVYPGEGASTHTVKFRLVVFRPFVGEIIAAKLKESDANGLRLSLG 102

Query: 227 FFDDIYVPVPLMPNPYHTEPDPEHKNGTRWVWEYMGENYPIDWADEIRFRVHTVNYPPLP 48
           FF+DIYVP  L+P+P  +EPDP  +   +W+WE+    Y ID  DEI+FRV +VNYP +P
Sbjct: 103 FFEDIYVPSHLLPSPSRSEPDPYGRYEVKWIWEFGDTKYVIDGLDEIKFRVLSVNYPSIP 162

Query: 47  VEQGKDSE 24
           +EQ + S+
Sbjct: 163 IEQAEGSK 170



 Score = 61.2 bits (147), Expect(2) = 5e-49
 Identities = 29/38 (76%), Positives = 33/38 (86%)
 Frame = -2

Query: 517 MFVMSEIEHTLRLPPHLLNCPLNAAIKGELESLFLDKV 404
           MF +S+IEHTLRLPPHLL  PLN AIK ELE++FLDKV
Sbjct: 1   MFYLSKIEHTLRLPPHLLRLPLNEAIKLELENVFLDKV 38


>ref|XP_010542701.1| PREDICTED: DNA-directed RNA polymerase III subunit RPC8 [Tarenaya
           hassleriana] gi|729348836|ref|XP_010542702.1| PREDICTED:
           DNA-directed RNA polymerase III subunit RPC8 [Tarenaya
           hassleriana] gi|729348839|ref|XP_010542703.1| PREDICTED:
           DNA-directed RNA polymerase III subunit RPC8 [Tarenaya
           hassleriana]
          Length = 205

 Score =  160 bits (405), Expect(2) = 3e-48
 Identities = 74/128 (57%), Positives = 97/128 (75%)
 Frame = -1

Query: 407 GXXXXXYDILSIDGGFIFPGDGASTYTARFRLVMFRPYVGEVISARLKESTKDGLRLSLG 228
           G     YDI SI GGF+FPGDGA++YT  FR+V+FRP+VGE+I A+LKES  DGLRL+LG
Sbjct: 43  GLCVSVYDIQSIKGGFVFPGDGAASYTVVFRMVVFRPFVGEIIVAKLKESDADGLRLTLG 102

Query: 227 FFDDIYVPVPLMPNPYHTEPDPEHKNGTRWVWEYMGENYPIDWADEIRFRVHTVNYPPLP 48
           FF+DIYVP PL+P P   E DP ++N  RWVWEY G++Y ID + +I+FRV  V YP +P
Sbjct: 103 FFEDIYVPSPLLPAPNRFEADPCNRNQMRWVWEYDGQDYVIDDSFKIKFRVENVTYPAVP 162

Query: 47  VEQGKDSE 24
           +E+ + S+
Sbjct: 163 IERPEQSK 170



 Score = 59.7 bits (143), Expect(2) = 3e-48
 Identities = 27/38 (71%), Positives = 32/38 (84%)
 Frame = -2

Query: 517 MFVMSEIEHTLRLPPHLLNCPLNAAIKGELESLFLDKV 404
           MF +SE+EHTLR+PPHLLN P+  AIK  LES+FLDKV
Sbjct: 1   MFYLSELEHTLRVPPHLLNLPVEDAIKSVLESIFLDKV 38


>ref|XP_011079993.1| PREDICTED: DNA-directed RNA polymerase III subunit RPC8 isoform X2
           [Sesamum indicum]
          Length = 158

 Score =  197 bits (500), Expect = 8e-48
 Identities = 88/112 (78%), Positives = 102/112 (91%)
 Frame = -1

Query: 338 STYTARFRLVMFRPYVGEVISARLKESTKDGLRLSLGFFDDIYVPVPLMPNPYHTEPDPE 159
           + +  RFRLVMFRP+VGEVISARLKES+KDGLRLSLGFFDDIYVPVPL+ +P H+EPDPE
Sbjct: 21  TAFAVRFRLVMFRPFVGEVISARLKESSKDGLRLSLGFFDDIYVPVPLLASPNHSEPDPE 80

Query: 158 HKNGTRWVWEYMGENYPIDWADEIRFRVHTVNYPPLPVEQGKDSEQKDSEEK 3
           HKNG RWVWEY GENYPID  DEIRFRVH V+YPP+P+EQGKDS++K+SE+K
Sbjct: 81  HKNGIRWVWEYEGENYPIDGTDEIRFRVHNVSYPPVPLEQGKDSDEKESEQK 132


>ref|XP_007050414.1| RNA polymerase Rpb7 N-terminal domain-containing protein [Theobroma
           cacao] gi|508702675|gb|EOX94571.1| RNA polymerase Rpb7
           N-terminal domain-containing protein [Theobroma cacao]
          Length = 210

 Score =  156 bits (395), Expect(2) = 1e-47
 Identities = 76/137 (55%), Positives = 99/137 (72%), Gaps = 9/137 (6%)
 Frame = -1

Query: 407 GXXXXXYDILSIDGGFIFPGDGASTYTARFRLVMFRPYVGEVISARLKESTKDGLRLSLG 228
           G     YDI SI GGFI+PGDGASTYT  FRL++FRP+VGE+I A+LKES  +GLRLSLG
Sbjct: 43  GLCISVYDIRSIKGGFIYPGDGASTYTVEFRLIVFRPFVGEIIVAKLKESDANGLRLSLG 102

Query: 227 FFDDIYVPVPLMPNPYHTEPDPEHKNGTRWVWEYMGE---------NYPIDWADEIRFRV 75
           FFDDIY+PV L+P P   E DP ++N  RW+W++ GE          + ID  D+I+FRV
Sbjct: 103 FFDDIYIPVHLLPIPSRFESDPNNRNQGRWIWDF-GEAEEAQSEEPRFVIDGMDQIKFRV 161

Query: 74  HTVNYPPLPVEQGKDSE 24
           H+V YP +P+EQ ++S+
Sbjct: 162 HSVIYPSIPLEQPENSK 178



 Score = 61.2 bits (147), Expect(2) = 1e-47
 Identities = 30/38 (78%), Positives = 33/38 (86%)
 Frame = -2

Query: 517 MFVMSEIEHTLRLPPHLLNCPLNAAIKGELESLFLDKV 404
           MF +S IEHTLRLPPHLLN PL+ AIK ELE+LFLDKV
Sbjct: 1   MFYLSLIEHTLRLPPHLLNLPLDEAIKIELEALFLDKV 38


>gb|KCW84674.1| hypothetical protein EUGRSUZ_B01492 [Eucalyptus grandis]
          Length = 212

 Score =  162 bits (409), Expect(2) = 4e-47
 Identities = 83/140 (59%), Positives = 97/140 (69%), Gaps = 12/140 (8%)
 Frame = -1

Query: 407 GXXXXXYDILSIDGGFIFPGDGASTYTARFRLVMFRPYVGEVISARLKESTKDGLRLSLG 228
           G     YDI  IDGGFIFPGDGA TYT   RL++FRP+VGE+I A+LKE  KDGLRLS+G
Sbjct: 43  GLCVSVYDIRKIDGGFIFPGDGAPTYTVECRLLVFRPFVGEIIDAKLKEFDKDGLRLSMG 102

Query: 227 FFDDIYVPVPLMPNPYHTEPDPEHKNGTRWVWEYM--GEN---------YPIDWADE-IR 84
           FFDDIY+P  L+P P   EPD E+ N  RW+WEY   GEN         YPID   E IR
Sbjct: 103 FFDDIYIPFHLLPYPSRFEPDSENGNRFRWIWEYQANGENEDDQTSATVYPIDEIGETIR 162

Query: 83  FRVHTVNYPPLPVEQGKDSE 24
           FRV +VNYP +P+EQ KDS+
Sbjct: 163 FRVQSVNYPSIPLEQPKDSK 182



 Score = 54.3 bits (129), Expect(2) = 4e-47
 Identities = 26/38 (68%), Positives = 31/38 (81%)
 Frame = -2

Query: 517 MFVMSEIEHTLRLPPHLLNCPLNAAIKGELESLFLDKV 404
           MF +S IEHTLRLPPHLL+  L+ A+K +LE LFLDKV
Sbjct: 1   MFNLSLIEHTLRLPPHLLSLSLDKAVKHDLEKLFLDKV 38


Top