BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Forsythia22_contig00019049
         (2359 letters)

Database: ./nr 
           69,698,275 sequences; 24,982,196,650 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN76793.1| hypothetical protein VITISV_026680 [Vitis vinifera]   644   0.0  
emb|CAE05990.1| OSJNBa0004L19.22 [Oryza sativa Japonica Group]        633   0.0  
ref|XP_008652480.1| PREDICTED: transposon Tf2-1 polyprotein isof...   640   0.0  
ref|XP_008671115.1| PREDICTED: uncharacterized protein LOC103648...   623   0.0  
gb|ABA95319.1| retrotransposon protein, putative, unclassified [...   619   0.0  
gb|AAP53789.1| retrotransposon protein, putative, unclassified [...   624   0.0  
gb|AAG13508.1|AC068924_13 putative gag-pol polyprotein [Oryza sa...   620   0.0  
gb|AAV24812.1| putative polyprotein [Oryza sativa Japonica Group]     611   0.0  
emb|CAE03590.1| OSJNBa0087O24.13 [Oryza sativa Japonica Group]        617   0.0  
ref|NP_001057680.2| Os06g0493000 [Oryza sativa Japonica Group] g...   620   0.0  
gb|ABF94845.1| retrotransposon protein, putative, unclassified [...   618   0.0  
gb|AAL76001.1|AF466646_9 putative gag-pol polyprotein [Zea mays]      608   0.0  
emb|CAH66499.1| H0321H01.8 [Oryza sativa Indica Group]                604   0.0  
gb|AAX95226.1| retrotransposon protein, putative, unclassified [...   597   0.0  
gb|ABA91843.2| retrotransposon protein, putative, unclassified [...   597   0.0  
gb|AAG51046.1|AC069473_8 gypsy/Ty-3 retroelement polyprotein; 69...   604   0.0  
gb|AAL68644.1|AF458768_1 polyprotein [Oryza sativa Japonica Group]    602   0.0  
emb|CAD40278.2| OSJNBb0062H02.17 [Oryza sativa Japonica Group] g...   608   0.0  
emb|CAJ00278.1| hypothetical protein [Lotus japonicus]                600   0.0  
emb|CAJ00277.1| hypothetical protein [Lotus japonicus]                600   0.0  

>emb|CAN76793.1| hypothetical protein VITISV_026680 [Vitis vinifera]
          Length = 1469

 Score =  644 bits (1661), Expect(2) = 0.0
 Identities = 318/608 (52%), Positives = 427/608 (70%), Gaps = 6/608 (0%)
 Frame = -2

Query: 2358 RKYVLVFFDDILVYSEDMLSHTEHLGTVLQILRKHQLYAKLSKCSFGQTRVEYLGHIINQ 2179
            RK++LVFF DILVYS+ +  H  HL TVL IL++HQL+AK SKC FG + +EYLGH+I++
Sbjct: 710  RKFILVFFYDILVYSKSLADHVHHLQTVLDILKQHQLFAKKSKCCFGCSEIEYLGHLISK 769

Query: 2178 QGVSADPRKIEAMQIWPTPVNLKQLRGFLGLTGYYRKFMKGYGXXXXXXXXXXXXDIFIW 1999
             GV ADP KIEAM  WP P +LK LRGFLGLTGYYRKF+KGYG            + F W
Sbjct: 770  DGVQADPTKIEAMLNWPFPTSLKSLRGFLGLTGYYRKFIKGYGLIAAPLTALLKKNSFKW 829

Query: 1998 TETTEAAFNKLKMAMSTTPVLALPDFSQPFVIETDASYGGIGAVLMQKKRPLSYISKSMG 1819
            TE+ + AF  LK  +++ PVLALPDFS PF I+ DAS  G+GAVLMQ+ RPL+Y+S+++ 
Sbjct: 830  TESAKRAFQDLKHDVTSPPVLALPDFSIPFTIQCDASGIGVGAVLMQQGRPLAYMSQAIH 889

Query: 1818 PRNLGMSIYEKELFALVTAVVKWRHYLEGHHFV--TDHQSLKYLLEQRITTPLQQKWLTK 1645
             + L +S YEKEL ALV AV KWR YL GH+F   TD  SLKYLLEQ++ TPLQQKW+TK
Sbjct: 890  GKALQLSTYEKELMALVLAVKKWRSYLLGHNFKIQTDQXSLKYLLEQKMGTPLQQKWITK 949

Query: 1644 LMGLDYEIQYRKGVENVVADALSRR----EEGECSALTQLTPTWVQEVMNSYEGDDTATE 1477
            L+G ++ ++Y++G EN VADALSR+    +EG+  A+T    TW++++   Y  D    +
Sbjct: 950  LLGYEFVVEYKQGKENKVADALSRKMEDQKEGKLYAITAPANTWLEQLRTXYAIDPKLQQ 1009

Query: 1476 KIQSLVMDPTSDQSYQYCNGVLRYKGKLYIGSGGDIRRKMIQCIHSSQEGGHSEVQASIM 1297
             I++L     + Q+Y+  +G+L YKG+LYI +  ++R +++  +HSS +GGHS    ++ 
Sbjct: 1010 IIKNLEQGSLASQNYKQRDGLLFYKGRLYIPASKELREQILYLLHSSPQGGHSGFHKTLH 1069

Query: 1296 RAKQHIFWPGMSMDIKMEVLQCDICQRCKGEHTPYPGLLHPLPIPQHPWSHISLDFIEGL 1117
            RAK   +W GM  +++  + +CDICQ+ K E+    GLL PLPIP   W+ ISLDFIEGL
Sbjct: 1070 RAKSEFYWEGMRKEVRRFIKECDICQQNKSENIHPAGLLQPLPIPTKVWTDISLDFIEGL 1129

Query: 1116 PKSEGKDVIMVVVDRFTKYGHFITLAHPFTAKRAAQLFLDNISRLHGLPQSIISDRDKIF 937
            P SE   VIMVVVDR +KY HFI ++HP+TA + AQ+FL NI +LHGLP SI++DRD  F
Sbjct: 1130 PNSESYSVIMVVVDRLSKYAHFIPISHPYTASKIAQVFLANIFKLHGLPNSIVTDRDPTF 1189

Query: 936  TSSFWQELFKLLRTKLQLSTAYHPQSDGQTERLNQCLEMYLRCMTHDKPKAWAKWIPLAE 757
            TS+FW+ELFKL  T L+ S+AYHPQ+DGQTE +N+ +E YLRC + DKPK W KW+PLAE
Sbjct: 1190 TSTFWKELFKLQGTTLKFSSAYHPQTDGQTEIVNKMVEQYLRCFSGDKPKGWVKWLPLAE 1249

Query: 756  WWYNTTYHTAIQRTPFEALYGTSPPQLALGPYHQTNLAAVEDLLQKRHKMNRQLKESLAQ 577
            WWYNT  H + + +PFE++YG  PP+L       T L  VE+ L+ R ++ R L+ +L  
Sbjct: 1250 WWYNTNIHASTKLSPFESVYGYPPPKLIPYTPGTTQLQEVENTLKTRDEIIRILRTNLQL 1309

Query: 576  ASARMKHY 553
            A  RMK +
Sbjct: 1310 AQDRMKKF 1317



 Score =  115 bits (287), Expect(2) = 0.0
 Identities = 57/131 (43%), Positives = 83/131 (63%)
 Frame = -3

Query: 554  MVYLKLHPYQPQTVVRGENHKLSPKYYGPFKVETRIGEVAYRLKLPARAKIHPTFHVSLL 375
            +VYL+L PY+ Q+VV+  N KLSP++YGP++V  +IG VAYRL+LP  AKIHP FHVS L
Sbjct: 1332 LVYLRLQPYKQQSVVQRRNLKLSPRFYGPYRVLEKIGTVAYRLELPPEAKIHPVFHVSCL 1391

Query: 374  KKKIGDKAVCVTELPSGTNAQYLDKKPLKILQARMFIKGERAGAKWLIQWTDQLEDEATW 195
            K+K+G++   V  LP       +  +P +IL  R+  K   A  + L++W    EDEA+W
Sbjct: 1392 KEKLGERHQLVVTLPPXDKDGVIRXEPEEILHRRLKKKKNHAVTEVLVKWKGLGEDEASW 1451

Query: 194  EDSEGNQQQYP 162
             +      ++P
Sbjct: 1452 VEYSTLVNEFP 1462


>emb|CAE05990.1| OSJNBa0004L19.22 [Oryza sativa Japonica Group]
          Length = 1586

 Score =  633 bits (1633), Expect(2) = 0.0
 Identities = 306/607 (50%), Positives = 418/607 (68%), Gaps = 5/607 (0%)
 Frame = -2

Query: 2358 RKYVLVFFDDILVYSEDMLSHTEHLGTVLQILRKHQLYAKLSKCSFGQTRVEYLGHIINQ 2179
            RKYVLVFFDDIL+YS+D   H EH+  V+++L +++L  KL KC+FG   V YLGHII+Q
Sbjct: 833  RKYVLVFFDDILIYSKDWAEHKEHIRQVMKVLEENKLVVKLKKCAFGLPSVTYLGHIISQ 892

Query: 2178 QGVSADPRKIEAMQIWPTPVNLKQLRGFLGLTGYYRKFMKGYGXXXXXXXXXXXXDIFIW 1999
             GV+ DP+K+E +  +PTP ++  LR FLG+TGYYR+F+K YG            + F W
Sbjct: 893  DGVATDPKKVEKIATYPTPKSVTDLRKFLGMTGYYRRFIKNYGIVCRPLHDMLKKEGFQW 952

Query: 1998 TETTEAAFNKLKMAMSTTPVLALPDFSQPFVIETDASYGGIGAVLMQKKRPLSYISKSMG 1819
                  AF  LK  M T+PVL+LPDF++ FVIE DA   GIGAVLMQ  RPL+Y SK++G
Sbjct: 953  EREQTEAFETLKTHMCTSPVLSLPDFTKEFVIEADACGNGIGAVLMQSGRPLAYFSKTLG 1012

Query: 1818 PRNLGMSIYEKELFALVTAVVKWRHYLEGHHFV--TDHQSLKYLLEQRITTPLQQKWLTK 1645
            P+    SIYEKE  A++ A+ KWRHY+ G   +  TD QSLK+++ QR+   +Q K L K
Sbjct: 1013 PKAAAQSIYEKEAMAILEALKKWRHYVLGSRLIIKTDQQSLKFMMNQRLVEGIQHKLLLK 1072

Query: 1644 LMGLDYEIQYRKGVENVVADALSRREEGE-CSALTQLTPTWVQEVMNSYEGDDTATEKIQ 1468
            LM  DY I+Y+ G EN+VADALSR    E C A+T + P WV+++  SYEGD  A + + 
Sbjct: 1073 LMEYDYSIEYKAGKENLVADALSRIPPAEQCQAITTVIPEWVRDIQRSYEGDVQAHKILS 1132

Query: 1467 SLVMDPTSDQSYQYCNGVLRYKGKLYIGSGGDIRRKMIQCIHSSQEGGHSEVQASIMRAK 1288
             +  +  +D SY    G+LRYKG++Y+G   +IR ++I+  HSS  GGHS ++A+  R K
Sbjct: 1133 LIGTEGDTDGSYSQEAGLLRYKGRIYVGENTEIREELIRSYHSSAFGGHSGMRATYHRIK 1192

Query: 1287 QHIFWPGMSMDIKMEVLQCDICQRCKGEHTPYPGLLHPLPIPQHPWSHISLDFIEGLPKS 1108
               +WPG+   ++  + +C ICQ  K EH   PGLL PL +P   W+HI++DF+EGLPKS
Sbjct: 1193 SLFYWPGLKKAVEGFIRECPICQVTKAEHIHIPGLLDPLEVPDMAWAHITMDFVEGLPKS 1252

Query: 1107 EGKDVIMVVVDRFTKYGHFITLAHPFTAKRAAQLFLDNISRLHGLPQSIISDRDKIFTSS 928
             GKDVI+VVVDR TKY HFI +AHP+T ++  +LF++NI RLHG+P +II+DRD+IFTS 
Sbjct: 1253 NGKDVILVVVDRLTKYAHFIAMAHPYTVEQVVELFMNNIHRLHGMPMAIITDRDRIFTSQ 1312

Query: 927  FWQELFKLLRTKLQLSTAYHPQSDGQTERLNQCLEMYLRCMTHDKPKAWAKWIPLAEWWY 748
             +QE+FK ++ +L+ ST+YHPQ+DGQTER+NQCLE YLR MT  +P  W  W+ LAEWWY
Sbjct: 1313 LFQEIFKSMKVRLKFSTSYHPQTDGQTERVNQCLESYLRSMTFQEPTRWHSWLALAEWWY 1372

Query: 747  NTTYHTAIQRTPFEALYGTSPPQL--ALGPYHQTNLAAVEDLLQKRHKMNRQLKESLAQA 574
            NTTYHT+IQ TPF+ALYG  PPQ+     P + +  A V   ++++  + ++LK SL +A
Sbjct: 1373 NTTYHTSIQMTPFQALYGYPPPQINEFSVPCNVSEEARV--TIEQKDAIIQKLKYSLTEA 1430

Query: 573  SARMKHY 553
              R+KHY
Sbjct: 1431 QRRIKHY 1437



 Score =  119 bits (298), Expect(2) = 0.0
 Identities = 59/135 (43%), Positives = 82/135 (60%)
 Frame = -3

Query: 554  MVYLKLHPYQPQTVVRGENHKLSPKYYGPFKVETRIGEVAYRLKLPARAKIHPTFHVSLL 375
            MVYLKL PY+        + KL  K+YGPFK+  ++G VAY+L+LP  + IHP FHVS L
Sbjct: 1452 MVYLKLQPYRQTAFGIRGSLKLRSKFYGPFKIMEKVGRVAYKLQLPEGSNIHPVFHVSQL 1511

Query: 374  KKKIGDKAVCVTELPSGTNAQYLDKKPLKILQARMFIKGERAGAKWLIQWTDQLEDEATW 195
            KK IG +AV +  LPS      +  +P+ +L+ RM  +G  A  +WL+ W +    EATW
Sbjct: 1512 KKHIGSRAVPMANLPSVGPDGQIKTEPVAVLKRRMIPRGGVAVTQWLVLWHNLSPSEATW 1571

Query: 194  EDSEGNQQQYPTFKP 150
            ED+   Q  +P+F P
Sbjct: 1572 EDASMIQSMFPSFNP 1586


>ref|XP_008652480.1| PREDICTED: transposon Tf2-1 polyprotein isoform X1 [Zea mays]
            gi|670423336|ref|XP_008652482.1| PREDICTED: transposon
            Tf2-1 polyprotein isoform X1 [Zea mays]
          Length = 1567

 Score =  640 bits (1650), Expect(2) = 0.0
 Identities = 316/611 (51%), Positives = 409/611 (66%), Gaps = 3/611 (0%)
 Frame = -2

Query: 2358 RKYVLVFFDDILVYSEDMLSHTEHLGTVLQILRKHQLYAKLSKCSFGQTRVEYLGHIINQ 2179
            RK VL+F DDILVYS  + +H  HL  V Q+L  HQLYAK SKC+F  T++EYLGHII+ 
Sbjct: 787  RKCVLIFMDDILVYSPSLETHVVHLQQVFQVLETHQLYAKRSKCAFALTQIEYLGHIISD 846

Query: 2178 QGVSADPRKIEAMQIWPTPVNLKQLRGFLGLTGYYRKFMKGYGXXXXXXXXXXXXDIFIW 1999
            +GVS DP K E+M+ WPTP +  +LRGFLGLTGYYRKF+KGYG              F W
Sbjct: 847  KGVSTDPSKTESMRRWPTPKSHTELRGFLGLTGYYRKFVKGYGILAKPLTVLLQQKQFGW 906

Query: 1998 TETTEAAFNKLKMAMSTTPVLALPDFSQPFVIETDASYGGIGAVLMQKKRPLSYISKSMG 1819
              + + AF  LK AM TTPVLALP+FS+ FVIETDA   GIGAVL QK  P+++ SK++G
Sbjct: 907  PPSAQTAFEALKDAMITTPVLALPNFSETFVIETDACDTGIGAVLSQKGHPVAFYSKALG 966

Query: 1818 PRNLGMSIYEKELFALVTAVVKWRHYLEGHHFV--TDHQSLKYLLEQRITTPLQQKWLTK 1645
             +N  +S YEKE  A++ AV KWR YL    FV  TDH+SL +L +Q + T +Q+K +TK
Sbjct: 967  VKNSQLSTYEKEFLAILMAVEKWRCYLSRGPFVIRTDHRSLCHLQDQTLATDMQKKAMTK 1026

Query: 1644 LMGLDYEIQYRKGVENVVADALSRREEG-ECSALTQLTPTWVQEVMNSYEGDDTATEKIQ 1468
            L GL + +QY+KG EN  ADALSR     E SA++  TP W+QE+ NSYE D  A   + 
Sbjct: 1027 LAGLQFSVQYKKGAENKAADALSRVAHNMELSAISATTPVWLQEITNSYELDTHAQSLLA 1086

Query: 1467 SLVMDPTSDQSYQYCNGVLRYKGKLYIGSGGDIRRKMIQCIHSSQEGGHSEVQASIMRAK 1288
             L +   ++Q ++  NG++    +L +G    ++ K+I   H+S  GGHS +QA+  R K
Sbjct: 1087 ELAVSSPNEQGFELKNGLIYKNNRLVVGQNVGLQTKLISAFHASPLGGHSGIQATYQRVK 1146

Query: 1287 QHIFWPGMSMDIKMEVLQCDICQRCKGEHTPYPGLLHPLPIPQHPWSHISLDFIEGLPKS 1108
            +   W G+  D++  V QC +CQ+ K EH  YPGLL PLPIPQ  W  +S+DFIEGLPKS
Sbjct: 1147 KLFLWNGLKADVEQFVRQCHVCQQAKHEHCKYPGLLQPLPIPQSSWQDLSMDFIEGLPKS 1206

Query: 1107 EGKDVIMVVVDRFTKYGHFITLAHPFTAKRAAQLFLDNISRLHGLPQSIISDRDKIFTSS 928
             G  VI+VVVDR TKY HF+ + HPFTA   A LF   + +LHG P +I+SDRDK+FTS+
Sbjct: 1207 NGYSVILVVVDRLTKYAHFLAVKHPFTASHIAHLFFSQVVKLHGFPHTIVSDRDKVFTST 1266

Query: 927  FWQELFKLLRTKLQLSTAYHPQSDGQTERLNQCLEMYLRCMTHDKPKAWAKWIPLAEWWY 748
            FWQELFKL  T+L LS+AYHPQSDGQTER+NQCLEM+LRC  H+ P  WAKW+  AE WY
Sbjct: 1267 FWQELFKLSGTQLHLSSAYHPQSDGQTERVNQCLEMFLRCAVHNSPSQWAKWLDSAELWY 1326

Query: 747  NTTYHTAIQRTPFEALYGTSPPQLALGPYHQTNLAAVEDLLQKRHKMNRQLKESLAQASA 568
            NT+YHT+I+ +PF+ALYG  P    +      N +  +  LQ+R +    +K +LA A +
Sbjct: 1327 NTSYHTSIKCSPFKALYGVEPNLGCIPVTDSLNPSEAQLTLQQRQEFLEVIKTNLASAQS 1386

Query: 567  RMKHYGLLEAS 535
            RMKHY  L  S
Sbjct: 1387 RMKHYADLNRS 1397



 Score =  103 bits (257), Expect(2) = 0.0
 Identities = 55/137 (40%), Positives = 75/137 (54%)
 Frame = -3

Query: 554  MVYLKLHPYQPQTVVRGENHKLSPKYYGPFKVETRIGEVAYRLKLPARAKIHPTFHVSLL 375
            +VYLKL P+   +V      KLS KY+GPFK+  ++G  AY+L LP  A IHP FHVS L
Sbjct: 1406 LVYLKLQPFAQVSVAYRPCAKLSFKYFGPFKIVDKVGSAAYKLLLPESANIHPVFHVSQL 1465

Query: 374  KKKIGDKAVCVTELPSGTNAQYLDKKPLKILQARMFIKGERAGAKWLIQWTDQLEDEATW 195
            K  + D     TELP    ++ +   P +IL  R+  KG  A  + LI+W     + A+W
Sbjct: 1466 KTHVPDYTPVFTELPPTAFSENVTPNPERILDRRLVKKGSAAVTQILIKWEGIPVEMASW 1525

Query: 194  EDSEGNQQQYPTFKPWG 144
            ED    Q ++P    WG
Sbjct: 1526 EDYTVLQSRFPNSSIWG 1542


>ref|XP_008671115.1| PREDICTED: uncharacterized protein LOC103648418 [Zea mays]
          Length = 1853

 Score =  623 bits (1607), Expect(2) = 0.0
 Identities = 310/605 (51%), Positives = 401/605 (66%), Gaps = 5/605 (0%)
 Frame = -2

Query: 2358 RKYVLVFFDDILVYSEDMLSHTEHLGTVLQILRKHQLYAKLSKCSFGQTRVEYLGHIINQ 2179
            RK+V+VF DDILVYS +  SH EHL  V   LR H+ Y K  KC FGQ  + YLGHII+ 
Sbjct: 851  RKFVMVFIDDILVYSPNWQSHLEHLRLVFTALRHHKFYLKERKCVFGQKELSYLGHIISG 910

Query: 2178 QGVSADPRKIEAMQIWPTPVNLKQLRGFLGLTGYYRKFMKGYGXXXXXXXXXXXXDIFIW 1999
             GV+ DP+K +AM  WP P+N+  LRGFLGLTGYYR+F++GYG              F W
Sbjct: 911  NGVATDPKKTDAMLKWPKPLNVTDLRGFLGLTGYYRRFVQGYGAIARPLTRLLQKGAFQW 970

Query: 1998 TETTEAAFNKLKMAMSTTPVLALPDFSQPFVIETDASYGGIGAVLMQKKRPLSYISKSMG 1819
            T   E AF +LK AM +TPVLALPDF+ PFV+ETDA   G+GAVLMQ+ RP++++SK++G
Sbjct: 971  TSEAEMAFQRLKQAMVSTPVLALPDFNIPFVVETDACDDGVGAVLMQRGRPIAFLSKALG 1030

Query: 1818 PRNLGMSIYEKELFALVTAVVKWRHYLEGHHFV--TDHQSLKYLLEQRITTPLQQKWLTK 1645
             ++  +SIYEKE  AL+ AV  WRHYL+   F   TDH++L +L  Q + + LQ+K + K
Sbjct: 1031 IKSQKLSIYEKEFIALIMAVDHWRHYLQRSEFEIRTDHKALSFLGSQDLHSELQRKAMAK 1090

Query: 1644 LMGLDYEIQYRKGVENVVADALSRREEGECSALT---QLTPTWVQEVMNSYEGDDTATEK 1474
            LMGL +++ Y++G +N VADALSR   G   ALT   ++ P W+QEV NSY  D  A   
Sbjct: 1091 LMGLQFKVVYKQGKDNKVADALSR--VGAVMALTAVSEVQPLWIQEVTNSYVTDPAAQSL 1148

Query: 1473 IQSLVMDPTSDQSYQYCNGVLRYKGKLYIGSGGDIRRKMIQCIHSSQEGGHSEVQASIMR 1294
            +  L +    +  Y    GV+R  G +++G    +R K++  +H S  GGHS + A+  R
Sbjct: 1149 LARLCVHNPDEHGYSLSQGVIRKGGLIWVGQNSALRTKLVAAVHDSAAGGHSGMHATYHR 1208

Query: 1293 AKQHIFWPGMSMDIKMEVLQCDICQRCKGEHTPYPGLLHPLPIPQHPWSHISLDFIEGLP 1114
             K+   W GM  D+   V QC ICQ+ KGE     GLLHPLPIPQ  W  I++DFIE LP
Sbjct: 1209 LKKLFVWKGMKSDVADFVQQCQICQQAKGERVHPAGLLHPLPIPQGAWQDITMDFIEKLP 1268

Query: 1113 KSEGKDVIMVVVDRFTKYGHFITLAHPFTAKRAAQLFLDNISRLHGLPQSIISDRDKIFT 934
            +S G D I+VVVDRFTKY HFI L HPFTA + AQ+ LD + RLHGLP+SI+SDRDKIFT
Sbjct: 1269 QSGGCDTILVVVDRFTKYAHFIALKHPFTASQVAQVILDQVVRLHGLPKSIVSDRDKIFT 1328

Query: 933  SSFWQELFKLLRTKLQLSTAYHPQSDGQTERLNQCLEMYLRCMTHDKPKAWAKWIPLAEW 754
            S+FW +LFK+L TKL LSTAYHPQ+DGQ+ER+NQC+EMYLRC  H +P  W  W+ LAE+
Sbjct: 1329 SAFWTQLFKILGTKLNLSTAYHPQTDGQSERVNQCVEMYLRCAVHAQPTKWKTWLSLAEF 1388

Query: 753  WYNTTYHTAIQRTPFEALYGTSPPQLALGPYHQTNLAAVEDLLQKRHKMNRQLKESLAQA 574
            WYNT+YHT++  +PF+ LYG  PP  A         A V  +L +R +    L+E LA A
Sbjct: 1389 WYNTSYHTSLACSPFKVLYGYDPPFAAAPSVPSDTAADVAQVLVERAQFTAMLREQLAAA 1448

Query: 573  SARMK 559
              RMK
Sbjct: 1449 QNRMK 1453



 Score =  116 bits (291), Expect(2) = 0.0
 Identities = 61/138 (44%), Positives = 85/138 (61%)
 Frame = -3

Query: 554  MVYLKLHPYQPQTVVRGENHKLSPKYYGPFKVETRIGEVAYRLKLPARAKIHPTFHVSLL 375
            MV LKL PY   +VV     KL+ K++GP+K+  R+G VAYRL+LPA A++HP FHVS L
Sbjct: 1470 MVLLKLQPYAQHSVVSRPCPKLAFKFFGPYKIVERVGAVAYRLELPASAQVHPVFHVSQL 1529

Query: 374  KKKIGDKAVCVTELPSGTNAQYLDKKPLKILQARMFIKGERAGAKWLIQWTDQLEDEATW 195
            K  I D     + LP+ ++    + +PL+IL  R+  KG RA  + LI+W+   +D  TW
Sbjct: 1530 KPFIPDYTPVFSNLPAYSDLSSRNVQPLEILDRRLVKKGNRAVPQVLIRWSLLPDDATTW 1589

Query: 194  EDSEGNQQQYPTFKPWGQ 141
            ED    +Q+YP    WGQ
Sbjct: 1590 EDYNVLRQRYPNAIAWGQ 1607


>gb|ABA95319.1| retrotransposon protein, putative, unclassified [Oryza sativa
            Japonica Group]
          Length = 955

 Score =  619 bits (1596), Expect(2) = 0.0
 Identities = 300/613 (48%), Positives = 415/613 (67%), Gaps = 11/613 (1%)
 Frame = -2

Query: 2358 RKYVLVFFDDILVYSEDMLSHTEHLGTVLQILRKHQLYAKLSKCSFGQTRVEYLGHIINQ 2179
            RK+VLVFF DIL+YS+    H +H+  VLQ+L K+QL  +L KC+FG + V YLGH+I+ 
Sbjct: 197  RKFVLVFFYDILIYSKTREEHIKHIKAVLQVLEKNQLVVRLKKCAFGLSSVAYLGHVISS 256

Query: 2178 QGVSADPRKIEAMQIWPTPVNLKQLRGFLGLTGYYRKFMKGYGXXXXXXXXXXXXDIFIW 1999
             GV+ DP KI  +     P N+ ++R FLG+TGYYR+F+KGYG              F W
Sbjct: 257  DGVATDPSKISDIMNRKEPKNVTEVREFLGMTGYYRRFIKGYGLICRPLHDMLKKGGFNW 316

Query: 1998 TETTEAAFNKLKMAMSTTPVLALPDFSQPFVIETDASYGGIGAVLMQKKRPLSYISKSMG 1819
                  AF +LK  + T+PVLALP+F QPFVIE DA   GIGAVLMQ  RP++Y SK++G
Sbjct: 317  GLAQSEAFTELKGKLCTSPVLALPNFEQPFVIEADACEVGIGAVLMQAGRPIAYYSKALG 376

Query: 1818 PRNLGMSIYEKELFALVTAVVKWRHYLEGHHFV--TDHQSLKYLLEQRITTPLQQKWLTK 1645
            P+    SIYEKE  A++ A+ +WRHY+ G   V  TD QSLKY++ QR+   +Q K L K
Sbjct: 377  PKAAAQSIYEKEAMAILEALKRWRHYVLGGELVIKTDQQSLKYMMNQRLVEGIQHKLLLK 436

Query: 1644 LMGLDYEIQYRKGVENVVADALSRREEGE------CSALTQLTPTWVQEVMNSYEGDDTA 1483
            LM  +Y I+Y+ G EN+VADALSR  + +      C+A+  + P W+ ++  SYE +D  
Sbjct: 437  LMEYNYTIEYKAGRENLVADALSRSPKNKEEVTELCAAIAVVVPEWILDIKRSYE-EDVQ 495

Query: 1482 TEKIQSLVM---DPTSDQSYQYCNGVLRYKGKLYIGSGGDIRRKMIQCIHSSQEGGHSEV 1312
              K+ SL+    DP  +  Y++  G+++YKG++Y+G  G+IR ++IQ  HSS  GGH  +
Sbjct: 496  AHKLLSLIGTAGDPEGE--YKFEAGIMKYKGRIYVGETGEIRGQLIQAYHSSTFGGHCGI 553

Query: 1311 QASIMRAKQHIFWPGMSMDIKMEVLQCDICQRCKGEHTPYPGLLHPLPIPQHPWSHISLD 1132
            +A+  R K+  +WPG+   ++  +  C +CQ  K EH   PGLL+PL +P   W+HIS+D
Sbjct: 554  RATYQRIKKLFYWPGLKKGVENHIRNCPVCQVTKSEHVHIPGLLNPLEVPDMAWTHISMD 613

Query: 1131 FIEGLPKSEGKDVIMVVVDRFTKYGHFITLAHPFTAKRAAQLFLDNISRLHGLPQSIISD 952
            F+EGLPKS+GKDVI+VVVDR TKY HFI L+HP+T +   Q+F+DNI +LHG+P +I++D
Sbjct: 614  FVEGLPKSKGKDVILVVVDRLTKYAHFIALSHPYTVEEVVQVFMDNIHKLHGMPIAIVTD 673

Query: 951  RDKIFTSSFWQELFKLLRTKLQLSTAYHPQSDGQTERLNQCLEMYLRCMTHDKPKAWAKW 772
            RD++FTS+F+QE+FK  + +L+ STAYHPQ+DGQTER+NQCLE YLRCMT  +P+ W  W
Sbjct: 674  RDRVFTSTFFQEVFKSQKVQLRFSTAYHPQTDGQTERVNQCLESYLRCMTFQEPQNWCSW 733

Query: 771  IPLAEWWYNTTYHTAIQRTPFEALYGTSPPQLALGPYHQTNLAAVEDLLQKRHKMNRQLK 592
            I LAEWWYNTTYHTAIQ TPF+ALYG SPPQ++               L+++  + ++LK
Sbjct: 734  IALAEWWYNTTYHTAIQMTPFKALYGYSPPQISEFSVPCDVSQEARVTLEEKETIVQKLK 793

Query: 591  ESLAQASARMKHY 553
             S+  A  RMK+Y
Sbjct: 794  ASMEDAQRRMKYY 806



 Score =  120 bits (300), Expect(2) = 0.0
 Identities = 62/135 (45%), Positives = 82/135 (60%)
 Frame = -3

Query: 554  MVYLKLHPYQPQTVVRGENHKLSPKYYGPFKVETRIGEVAYRLKLPARAKIHPTFHVSLL 375
            MVYLKL PY+        + KL  KYYGPFKV  ++G VAYRL+LP  A IHP FHVS L
Sbjct: 821  MVYLKLQPYRQNAFGIRGSLKLRGKYYGPFKVLEKVGAVAYRLQLPEEAAIHPVFHVSQL 880

Query: 374  KKKIGDKAVCVTELPSGTNAQYLDKKPLKILQARMFIKGERAGAKWLIQWTDQLEDEATW 195
            KK +G  AV +  LP+      +  +P+ +LQ RM  +   A  +WLI W++    EATW
Sbjct: 881  KKHLGTHAVPMPNLPAVGPDGQIKTEPVAVLQRRMIPRNNVAVTQWLILWSNLTPAEATW 940

Query: 194  EDSEGNQQQYPTFKP 150
            ED+   Q+ +P F+P
Sbjct: 941  EDASYIQKVFPNFQP 955


>gb|AAP53789.1| retrotransposon protein, putative, unclassified [Oryza sativa
            Japonica Group]
          Length = 1611

 Score =  624 bits (1610), Expect(2) = 0.0
 Identities = 303/609 (49%), Positives = 418/609 (68%), Gaps = 7/609 (1%)
 Frame = -2

Query: 2358 RKYVLVFFDDILVYSEDMLSHTEHLGTVLQILRKHQLYAKLSKCSFGQTRVEYLGHIINQ 2179
            RK+VLVFF DIL+YS+    H EH+  V+Q L  +QL  +L KC FG  RV YLGHII+ 
Sbjct: 856  RKFVLVFFADILIYSKTQSEHLEHIKLVMQALSANQLVVRLKKCEFGLDRVSYLGHIISS 915

Query: 2178 QGVSADPRKIEAMQIWPTPVNLKQLRGFLGLTGYYRKFMKGYGXXXXXXXXXXXXDIFIW 1999
            +GVS DP+KI  ++    P N+ ++R FLG+ GYYR+F+KGYG            D F W
Sbjct: 916  EGVSTDPKKISDIKNRKPPKNVTEVREFLGMAGYYRRFIKGYGVICRPLHDLLKKDGFKW 975

Query: 1998 TETTEAAFNKLKMAMSTTPVLALPDFSQPFVIETDASYGGIGAVLMQKKRPLSYISKSMG 1819
             +T + AF  LK  M  +PVLALPDFSQPFVIETDA   GIGAVLMQK RPL+Y SK++G
Sbjct: 976  GDTQQEAFELLKEKMCNSPVLALPDFSQPFVIETDACGIGIGAVLMQKGRPLAYFSKALG 1035

Query: 1818 PRNLGMSIYEKELFALVTAVVKWRHYLEGHHFV--TDHQSLKYLLEQRITTPLQQKWLTK 1645
            P+    S+YEKE  A++ A+ KWRHY+ G   +  TD QSLK+++ QR+   +Q K L K
Sbjct: 1036 PKAAAQSVYEKEAIAILEALKKWRHYILGGSLIIKTDQQSLKFMMSQRLVEGIQHKLLLK 1095

Query: 1644 LMGLDYEIQYRKGVENVVADALSRR---EEGECSALTQLTPTWVQEVMNSYEGDDTATEK 1474
            LM  DY I+Y+ G EN+VADALSR    +E +C  +T + P WVQ++  SYE D  A + 
Sbjct: 1096 LMEFDYVIEYKSGKENLVADALSRSPNLKEEQCLPITVVVPEWVQDIKRSYEEDIFAHKI 1155

Query: 1473 IQSLVMDPTSDQSYQYCNGVLRYKGKLYIGSGGDIRRKMIQCIHSSQEGGHSEVQASIMR 1294
            +  +  D   ++ Y+  +G+L+YKG++Y+G   +IR  +++  H+S  GGHS ++A+  R
Sbjct: 1156 LSLIETDGDPERHYKLESGLLKYKGRIYVGETTEIRMLLLEAYHASYFGGHSGIRATYHR 1215

Query: 1293 AKQHIFWPGMSMDIKMEVLQCDICQRCKGEHTPYPGLLHPLPIPQHPWSHISLDFIEGLP 1114
             KQ  +WPG+   ++  + +C  CQ  K EH   PGLL+PL +P   W+HI++DFIEGLP
Sbjct: 1216 IKQLFYWPGLKKQVEHYIRECPTCQITKAEHIHIPGLLNPLEVPDMAWTHITMDFIEGLP 1275

Query: 1113 KSEGKDVIMVVVDRFTKYGHFITLAHPFTAKRAAQLFLDNISRLHGLPQSIISDRDKIFT 934
            KS+GKDVI+VVVDR TKY HF+ L+HP+T ++  Q+F+DNI +LHG+P  I++DRD++FT
Sbjct: 1276 KSQGKDVILVVVDRLTKYAHFLALSHPYTVEQVVQIFMDNIHKLHGMPMVIVTDRDRVFT 1335

Query: 933  SSFWQELFKLLRTKLQLSTAYHPQSDGQTERLNQCLEMYLRCMTHDKPKAWAKWIPLAEW 754
            S+F+QE+FK  + KL+ STA+HPQ+DGQTER+NQCLE YLR MT  +P+ W  W+ LAEW
Sbjct: 1336 SNFFQEIFKTQKVKLRFSTAHHPQTDGQTERVNQCLESYLRSMTFQEPQKWFSWLALAEW 1395

Query: 753  WYNTTYHTAIQRTPFEALYGTSPPQLA--LGPYHQTNLAAVEDLLQKRHKMNRQLKESLA 580
            WYNTTYHT+IQ TPF+ALYG  PPQ+     P + +  A V   L+ +  + ++LK S+ 
Sbjct: 1396 WYNTTYHTSIQMTPFQALYGYPPPQITEFAIPCNMSEEARV--TLEDKALILQKLKSSIG 1453

Query: 579  QASARMKHY 553
            +A  R+K Y
Sbjct: 1454 EAQRRIKFY 1462



 Score =  113 bits (283), Expect(2) = 0.0
 Identities = 59/135 (43%), Positives = 80/135 (59%)
 Frame = -3

Query: 554  MVYLKLHPYQPQTVVRGENHKLSPKYYGPFKVETRIGEVAYRLKLPARAKIHPTFHVSLL 375
            MVYLKL PY+   +    + KL  KYYGPFKV  ++G VAY+L+LP  A IHP FHVS L
Sbjct: 1477 MVYLKLQPYRQVAMGIRGSLKLRSKYYGPFKVIEKMGAVAYKLQLPDGAGIHPVFHVSQL 1536

Query: 374  KKKIGDKAVCVTELPSGTNAQYLDKKPLKILQARMFIKGERAGAKWLIQWTDQLEDEATW 195
            KK +G +A+ +  LP+      +  +P  +LQ RM  +      +WLI W +    EATW
Sbjct: 1537 KKHLGARAIPMPNLPAIGPDGQIKTEPAAVLQRRMIPRHNEPVTQWLILWENLTPAEATW 1596

Query: 194  EDSEGNQQQYPTFKP 150
            ED+   Q  +P F+P
Sbjct: 1597 EDASYIQAAFPNFQP 1611


>gb|AAG13508.1|AC068924_13 putative gag-pol polyprotein [Oryza sativa Japonica Group]
          Length = 1608

 Score =  620 bits (1599), Expect(2) = 0.0
 Identities = 300/606 (49%), Positives = 405/606 (66%), Gaps = 5/606 (0%)
 Frame = -2

Query: 2358 RKYVLVFFDDILVYSEDMLSHTEHLGTVLQILRKHQLYAKLSKCSFGQTRVEYLGHIINQ 2179
            RK+ LVFFDDIL+YS  +  H +H+ TVLQ+L  HQ   KLSKCSF Q  + YLGH+I  
Sbjct: 785  RKFALVFFDDILIYSPTLELHLQHVRTVLQLLSAHQWKVKLSKCSFAQQEISYLGHVIGA 844

Query: 2178 QGVSADPRKIEAMQIWPTPVNLKQLRGFLGLTGYYRKFMKGYGXXXXXXXXXXXXDI-FI 2002
             GV+ DP KI+ +  WP P  +K+LRGFLGL GYYRKF++ +G             I F 
Sbjct: 845  AGVATDPAKIQDVVSWPQPTTIKKLRGFLGLAGYYRKFVRHFGLISKPLTQLLKKGIPFK 904

Query: 2001 WTETTEAAFNKLKMAMSTTPVLALPDFSQPFVIETDASYGGIGAVLMQKKRPLSYISKSM 1822
            WT   E+AF +LK A+   PVLALPDFS+ F IETDAS  GIGAVL Q+K P++Y+S+++
Sbjct: 905  WTPEIESAFQQLKQALVAAPVLALPDFSKHFTIETDASDVGIGAVLSQEKHPIAYLSRAL 964

Query: 1821 GPRNLGMSIYEKELFALVTAVVKWRHYLEGHHFV--TDHQSLKYLLEQRITTPLQQKWLT 1648
            GP+  G+S YEKE  A++ AV  WR YL+   F+  TDH SL +L EQR+ TP QQK  T
Sbjct: 965  GPKTRGLSTYEKEYMAIILAVEHWRPYLQQGEFIILTDHHSLMHLTEQRLHTPWQQKAFT 1024

Query: 1647 KLMGLDYEIQYRKGVENVVADALSRREE--GECSALTQLTPTWVQEVMNSYEGDDTATEK 1474
            KL+GL Y+I YRKGV N  ADALSRRE    E +A+++  P+W+QE+M  Y+ D  + + 
Sbjct: 1025 KLLGLQYKICYRKGVSNAAADALSRRESPISEVAAISECIPSWMQELMQGYQLDGQSKQL 1084

Query: 1473 IQSLVMDPTSDQSYQYCNGVLRYKGKLYIGSGGDIRRKMIQCIHSSQEGGHSEVQASIMR 1294
            +  L + P S + YQ C G+L+YKGK+++G+   ++ K++  +H++  GGHS    +  +
Sbjct: 1085 LAELAISPNSRKDYQLCQGILKYKGKIWVGNNTALQHKLVNELHATPLGGHSGFPVTYRK 1144

Query: 1293 AKQHIFWPGMSMDIKMEVLQCDICQRCKGEHTPYPGLLHPLPIPQHPWSHISLDFIEGLP 1114
             K    WPGM   IK ++  C +C + K +   YPGLL PLP+P   W  ISLDFIEGLP
Sbjct: 1145 VKSLFAWPGMKKLIKEQLQSCQVCLQAKPDRARYPGLLQPLPVPAGAWQTISLDFIEGLP 1204

Query: 1113 KSEGKDVIMVVVDRFTKYGHFITLAHPFTAKRAAQLFLDNISRLHGLPQSIISDRDKIFT 934
            +S   + I+VVVD+F+KY HFI L+HPF A   AQ F+ NI +LHGLP++IISDRDKIFT
Sbjct: 1205 RSSHYNCILVVVDKFSKYSHFIPLSHPFNAGGVAQEFMKNIYKLHGLPRAIISDRDKIFT 1264

Query: 933  SSFWQELFKLLRTKLQLSTAYHPQSDGQTERLNQCLEMYLRCMTHDKPKAWAKWIPLAEW 754
            S FW +LF    T L +S+AYHPQSDGQTER+NQCLE+YLRC  H  P  W+ W+ LAE+
Sbjct: 1265 SQFWDQLFSKFGTDLHMSSAYHPQSDGQTERVNQCLEIYLRCFVHAAPHKWSSWLYLAEF 1324

Query: 753  WYNTTYHTAIQRTPFEALYGTSPPQLALGPYHQTNLAAVEDLLQKRHKMNRQLKESLAQA 574
            WYNT++H+ + +TPFE LYG +P    +G      +A + +   +R  M + L++ L +A
Sbjct: 1325 WYNTSFHSTLNKTPFEVLYGYTPSHFGIG-LDDCQIADLHEWHTERKFMQQLLQQHLNRA 1383

Query: 573  SARMKH 556
              +MKH
Sbjct: 1384 QQQMKH 1389



 Score =  108 bits (269), Expect(2) = 0.0
 Identities = 57/137 (41%), Positives = 76/137 (55%)
 Frame = -3

Query: 551  VYLKLHPYQPQTVVRGENHKLSPKYYGPFKVETRIGEVAYRLKLPARAKIHPTFHVSLLK 372
            VYLKL PY    V +   HKL+ +YYGPF+V +R+G VAY ++LPA + IHP FHVS LK
Sbjct: 1406 VYLKLQPYVQTFVAQRACHKLAFRYYGPFQVMSRVGTVAYHIQLPATSSIHPVFHVSQLK 1465

Query: 371  KKIGDKAVCVTELPSGTNAQYLDKKPLKILQARMFIKGERAGAKWLIQWTDQLEDEATWE 192
              +G       ELP+   A  +   P + L  R+  KG R+  + L  W      E+TWE
Sbjct: 1466 AAVGFSKKVQDELPTSLGALQV---PFQFLDKRLVKKGNRSVLQLLTHWYHSSPSESTWE 1522

Query: 191  DSEGNQQQYPTFKPWGQ 141
            D E    ++P    WGQ
Sbjct: 1523 DMEDLFARFPRALAWGQ 1539


>gb|AAV24812.1| putative polyprotein [Oryza sativa Japonica Group]
          Length = 1475

 Score =  611 bits (1576), Expect(2) = 0.0
 Identities = 303/612 (49%), Positives = 409/612 (66%), Gaps = 10/612 (1%)
 Frame = -2

Query: 2358 RKYVLVFFDDILVYSEDMLSHTEHLGTVLQILRKHQLYAKLSKCSFGQTRVEYLGHIINQ 2179
            R++VLVFFDDIL+YS+    H EH+  V+Q L+ + L  KL KC+FG   V YLGH+I+Q
Sbjct: 718  RRFVLVFFDDILIYSKTRAEHLEHVKLVMQALQDNHLVIKLKKCAFGLASVSYLGHVISQ 777

Query: 2178 QGVSADPRKIEAMQIWPTPVNLKQLRGFLGLTGYYRKFMKGYGXXXXXXXXXXXXDIFIW 1999
             GV+ DP+K+  ++ WPTP ++  +R FLG+TGYYR+F++GYG            + F W
Sbjct: 778  DGVATDPKKVGKIKNWPTPKDVTDVRKFLGMTGYYRRFIQGYGTICRPIHDMLKKNGFQW 837

Query: 1998 TETTEAAFNKLKMAMSTTPVLALPDFSQPFVIETDASYGGIGAVLMQKKRPLSYISKSMG 1819
                  AF  LK  + T+PVLALPDF Q F IE DA   GIGAVLMQ  RP+++ SK++G
Sbjct: 838  GADQTTAFETLKHKLRTSPVLALPDFDQAFTIEADACGVGIGAVLMQGGRPIAFFSKALG 897

Query: 1818 PRNLGMSIYEKELFALVTAVVKWRHYLEGHHFV--TDHQSLKYLLEQRITTPLQQKWLTK 1645
            P+  G SIYEKE  A++ A+ KWRHY+ G   +  TD QSLK+++ QR+   +Q K L K
Sbjct: 898  PKAAGQSIYEKEAMAILEALKKWRHYVLGSKLIIKTDQQSLKFMMGQRLVEGIQHKLLLK 957

Query: 1644 LMGLDYEIQYRKGVENVVADALSRREEGE-----CSALTQLTPTWVQEVMNSYEGDDTAT 1480
            LM  DY I+Y+ G EN+VADALSR  + E     C  +T + P W+ ++  SYE D  A 
Sbjct: 958  LMEYDYTIEYKSGKENLVADALSRLPQKEAVADRCHPMTVVIPEWIVDIQRSYENDVQA- 1016

Query: 1479 EKIQSLV---MDPTSDQSYQYCNGVLRYKGKLYIGSGGDIRRKMIQCIHSSQEGGHSEVQ 1309
             KI SL+    DP  D+ Y+   G+L+YKG++Y+G   DIRR++I   HSS  GGHS ++
Sbjct: 1017 HKILSLIGTAADP--DREYKLEAGLLKYKGRIYVGEATDIRRQLITTYHSSSFGGHSGMR 1074

Query: 1308 ASIMRAKQHIFWPGMSMDIKMEVLQCDICQRCKGEHTPYPGLLHPLPIPQHPWSHISLDF 1129
            A+  R K   +W GM  +++  + +C  CQ  K EH   PGLL+PL IP   W+HI++DF
Sbjct: 1075 ATHHRIKMLFYWHGMRGEVERFIRECPTCQITKSEHVHIPGLLNPLEIPDMAWTHITMDF 1134

Query: 1128 IEGLPKSEGKDVIMVVVDRFTKYGHFITLAHPFTAKRAAQLFLDNISRLHGLPQSIISDR 949
            IEGLPKS+GKDVI+VVVDR TKY HFI LAHP+  ++  + F++NI +LHG+P  II+DR
Sbjct: 1135 IEGLPKSQGKDVILVVVDRLTKYAHFIALAHPYDVEQVVEAFMNNIHKLHGMPMVIITDR 1194

Query: 948  DKIFTSSFWQELFKLLRTKLQLSTAYHPQSDGQTERLNQCLEMYLRCMTHDKPKAWAKWI 769
            D+IFTSS +QE+FK ++ KL+ STAYHPQ DGQTER+NQCLE YLR MT  +P  W  W+
Sbjct: 1195 DRIFTSSLFQEIFKAMKVKLRFSTAYHPQMDGQTERVNQCLESYLRNMTFQEPHKWYSWL 1254

Query: 768  PLAEWWYNTTYHTAIQRTPFEALYGTSPPQLALGPYHQTNLAAVEDLLQKRHKMNRQLKE 589
             LAEWWYNTT+HTAIQ TPF+A+YG SPPQ+                ++++  +  +LK 
Sbjct: 1255 ALAEWWYNTTFHTAIQMTPFKAMYGYSPPQINEFSVPCNISEEARVTIEEKEAILNKLKN 1314

Query: 588  SLAQASARMKHY 553
            SLA A  RMK++
Sbjct: 1315 SLADAQHRMKYF 1326



 Score =  117 bits (292), Expect(2) = 0.0
 Identities = 61/135 (45%), Positives = 83/135 (61%)
 Frame = -3

Query: 554  MVYLKLHPYQPQTVVRGENHKLSPKYYGPFKVETRIGEVAYRLKLPARAKIHPTFHVSLL 375
            MVYLKL PY+        + KL  K+YGPFKV  +IG++AY+L+LP  A+IHP FHVS L
Sbjct: 1341 MVYLKLKPYRQSAFGIRGSLKLRSKFYGPFKVLQKIGQLAYKLQLPDDAQIHPVFHVSQL 1400

Query: 374  KKKIGDKAVCVTELPSGTNAQYLDKKPLKILQARMFIKGERAGAKWLIQWTDQLEDEATW 195
            KK +G  A+ ++ LPS      +  +PL +LQ RM  +   A  +WLI W +    EATW
Sbjct: 1401 KKHLGKHAIPMSNLPSVGPDGQIKTEPLAVLQRRMVPRKGVAVTQWLILWQNLSPAEATW 1460

Query: 194  EDSEGNQQQYPTFKP 150
            ED+   Q  +P+F P
Sbjct: 1461 EDASVIQAMFPSFNP 1475


>emb|CAE03590.1| OSJNBa0087O24.13 [Oryza sativa Japonica Group]
          Length = 1311

 Score =  617 bits (1591), Expect(2) = 0.0
 Identities = 297/605 (49%), Positives = 400/605 (66%), Gaps = 3/605 (0%)
 Frame = -2

Query: 2358 RKYVLVFFDDILVYSEDMLSHTEHLGTVLQILRKHQLYAKLSKCSFGQTRVEYLGHIINQ 2179
            RK+VLVFFDDIL+YS  +  H  H+  VLQ+LR+H L AK SKC FGQ++VEYLG+II+ 
Sbjct: 558  RKFVLVFFDDILIYSPSLSDHVTHVELVLQLLRQHHLSAKPSKCVFGQSQVEYLGYIISN 617

Query: 2178 QGVSADPRKIEAMQIWPTPVNLKQLRGFLGLTGYYRKFMKGYGXXXXXXXXXXXXDIFIW 1999
             GV+ DP K++A++ WP P ++  L GFLGL GYYRKF+K +G              F W
Sbjct: 618  AGVAIDPTKVQAVKNWPVPKSVTDLSGFLGLAGYYRKFIKDFGLICKPLFTALKKTGFTW 677

Query: 1998 TETTEAAFNKLKMAMSTTPVLALPDFSQPFVIETDASYGGIGAVLMQKKRPLSYISKSMG 1819
             +  + AF  +K  ++  PVLA+P+F+QPF++E DAS  G+GAVLMQ  RPL+Y SK++G
Sbjct: 678  QDEQQQAFATIKDKLAHAPVLAMPNFTQPFILEADASGTGLGAVLMQNNRPLAYFSKAIG 737

Query: 1818 PRNLGMSIYEKELFALVTAVVKWRHYLEGHHFV--TDHQSLKYLLEQRITTPLQQKWLTK 1645
            P+  G+S Y+KE  A++ A+ KW+HY  G   +  TD  SLKY+ EQR+T  +Q K L K
Sbjct: 738  PKAAGLSTYDKEALAILEALKKWKHYFLGTSLIIRTDQASLKYINEQRLTEGIQHKLLIK 797

Query: 1644 LMGLDYEIQYRKGVENVVADALSRREE-GECSALTQLTPTWVQEVMNSYEGDDTATEKIQ 1468
            L+  DY+I+Y+KG EN  ADALSR     +  + T + PTW+ E++ SY  D   T    
Sbjct: 798  LLSYDYKIEYKKGKENKAADALSRIPSVAQLFSTTIIVPTWITEILASYATDPKCTALES 857

Query: 1467 SLVMDPTSDQSYQYCNGVLRYKGKLYIGSGGDIRRKMIQCIHSSQEGGHSEVQASIMRAK 1288
             L + P     Y   +G+LRYK +LY+G+G D+R K+ Q  H S  GGHS  +A+  RAK
Sbjct: 858  QLRITPQGHPPYTLTSGILRYKNRLYVGAGTDLRAKLQQSFHDSALGGHSGERATYQRAK 917

Query: 1287 QHIFWPGMSMDIKMEVLQCDICQRCKGEHTPYPGLLHPLPIPQHPWSHISLDFIEGLPKS 1108
               +WPGM  DI   V  C +CQ+ K EH   PGLLHPLPIP+  W+HIS+DFIEGLPKS
Sbjct: 918  LLFYWPGMKKDIASYVKLCPVCQKNKSEHNLQPGLLHPLPIPEMAWTHISMDFIEGLPKS 977

Query: 1107 EGKDVIMVVVDRFTKYGHFITLAHPFTAKRAAQLFLDNISRLHGLPQSIISDRDKIFTSS 928
            + KDVI V+VDRFTKY HF+ L+HPFTA +    F++N  + HGLP  I+SDRD+IFTS 
Sbjct: 978  DNKDVIWVIVDRFTKYAHFVALSHPFTADQIVTQFVENYYKHHGLPAVIVSDRDRIFTSQ 1037

Query: 927  FWQELFKLLRTKLQLSTAYHPQSDGQTERLNQCLEMYLRCMTHDKPKAWAKWIPLAEWWY 748
             W+++F+    KL  S+AYHPQ+DGQTER+NQCLE YLRCMT  KPK W   +  A+WWY
Sbjct: 1038 TWKDVFEKAGVKLHFSSAYHPQTDGQTERVNQCLENYLRCMTFTKPKKWKSLLAYAKWWY 1097

Query: 747  NTTYHTAIQRTPFEALYGTSPPQLALGPYHQTNLAAVEDLLQKRHKMNRQLKESLAQASA 568
            NT++HT +  TP++AL+G  PP LA      +      +  + +  +   +K SL +A A
Sbjct: 1098 NTSFHTTLGMTPYQALHGVPPPLLAESFLSPSLFTDARNKAEAKSVITAAIKSSLLKAQA 1157

Query: 567  RMKHY 553
            RMKH+
Sbjct: 1158 RMKHF 1162



 Score =  109 bits (273), Expect(2) = 0.0
 Identities = 56/135 (41%), Positives = 78/135 (57%)
 Frame = -3

Query: 554  MVYLKLHPYQPQTVVRGENHKLSPKYYGPFKVETRIGEVAYRLKLPARAKIHPTFHVSLL 375
            MVYLK+ PY+  ++    + KL  KYYGPF+V  RIG VAY+L LPA ++IHP FHVS L
Sbjct: 1177 MVYLKMQPYRHNSLGLHSSLKLHSKYYGPFRVLERIGSVAYKLLLPASSQIHPVFHVSQL 1236

Query: 374  KKKIGDKAVCVTELPSGTNAQYLDKKPLKILQARMFIKGERAGAKWLIQWTDQLEDEATW 195
            KK IG K V    LP   +   +  +P  +L+ R+  +      +W +QW +     ATW
Sbjct: 1237 KKHIGPKVVPEPGLPLTDDNGNILSQPTAVLERRLIPQNNAPVVQWKVQWANLPLSAATW 1296

Query: 194  EDSEGNQQQYPTFKP 150
            ED+    + +P F P
Sbjct: 1297 EDAAFISKVFPAFNP 1311


>ref|NP_001057680.2| Os06g0493000 [Oryza sativa Japonica Group]
            gi|255677065|dbj|BAF19594.2| Os06g0493000 [Oryza sativa
            Japonica Group]
          Length = 866

 Score =  620 bits (1600), Expect(2) = 0.0
 Identities = 299/604 (49%), Positives = 404/604 (66%), Gaps = 2/604 (0%)
 Frame = -2

Query: 2358 RKYVLVFFDDILVYSEDMLSHTEHLGTVLQILRKHQLYAKLSKCSFGQTRVEYLGHIINQ 2179
            RK+VLVFFDDIL+YS+    H +HL  VLQ+LR HQL+AK SKC FGQ +VEYLG+II+ 
Sbjct: 114  RKFVLVFFDDILIYSKSATEHAQHLSLVLQLLRHHQLFAKPSKCVFGQDQVEYLGYIISS 173

Query: 2178 QGVSADPRKIEAMQIWPTPVNLKQLRGFLGLTGYYRKFMKGYGXXXXXXXXXXXXDIFIW 1999
             GV+ DP K++A+Q WPTP ++ +LRGFLGL GYYR+F+K +G            + F W
Sbjct: 174  SGVATDPVKVQAVQNWPTPTSITELRGFLGLAGYYRRFIKNFGIICRPMFDALKKNNFHW 233

Query: 1998 TETTEAAFNKLKMAMSTTPVLALPDFSQPFVIETDASYGGIGAVLMQKKRPLSYISKSMG 1819
             E  + AF+ +K+ ++  PVLA+PDFS PF++E DAS  GIGAVLMQ  RPL+Y+SK++G
Sbjct: 234  QEVQQQAFDAIKLQLAQAPVLAMPDFSLPFILEADASGHGIGAVLMQNGRPLAYLSKAIG 293

Query: 1818 PRNLGMSIYEKELFALVTAVVKWRHYLEGHHFV--TDHQSLKYLLEQRITTPLQQKWLTK 1645
            P+   +S Y+KE  A++ A+ KW+HY  G   +  TD  SLKY+ EQRIT  +Q K L K
Sbjct: 294  PKAAALSTYDKEALAILEALKKWKHYFLGTSLIIRTDQASLKYINEQRITEGVQHKLLIK 353

Query: 1644 LMGLDYEIQYRKGVENVVADALSRREEGECSALTQLTPTWVQEVMNSYEGDDTATEKIQS 1465
            L+  DY+I+Y+KG EN  ADALSR ++      T + P W+ EV  SY  D    E    
Sbjct: 354  LLSYDYKIEYKKGQENKAADALSRMQQLNALTTTVIVPQWITEVAASYSTDPKCHELESH 413

Query: 1464 LVMDPTSDQSYQYCNGVLRYKGKLYIGSGGDIRRKMIQCIHSSQEGGHSEVQASIMRAKQ 1285
            L + P S   Y    G+LRYK  + +G+G  +R +++   H S  GGHS  +A+  R KQ
Sbjct: 414  LHIAPQSHPPYTLKGGILRYKDHIVVGAGNTLREQLLVSFHDSALGGHSGERATYQRMKQ 473

Query: 1284 HIFWPGMSMDIKMEVLQCDICQRCKGEHTPYPGLLHPLPIPQHPWSHISLDFIEGLPKSE 1105
              +WPGM + +   V  C +CQ+ K EH    GLL PLP+P+  WSHI++DF+EGLPKSE
Sbjct: 474  LFYWPGMKLAVTQFVKACPVCQKNKTEHNMPAGLLQPLPLPEMAWSHITMDFVEGLPKSE 533

Query: 1104 GKDVIMVVVDRFTKYGHFITLAHPFTAKRAAQLFLDNISRLHGLPQSIISDRDKIFTSSF 925
            GKDVI V+VDRFTKY HFI L+HPFTA +    FL++  +LHGLP  I+SDRD+IFTSS 
Sbjct: 534  GKDVIWVIVDRFTKYAHFIPLSHPFTADQILTQFLEHFYKLHGLPTVIVSDRDRIFTSST 593

Query: 924  WQELFKLLRTKLQLSTAYHPQSDGQTERLNQCLEMYLRCMTHDKPKAWAKWIPLAEWWYN 745
            W+E+F+    KL  S+AYHPQ+DGQ+ER+NQCLE YLRCMT  KP+ W   +P AEWWYN
Sbjct: 594  WKEVFEKAGVKLHFSSAYHPQTDGQSERVNQCLENYLRCMTSSKPRKWKALLPHAEWWYN 653

Query: 744  TTYHTAIQRTPFEALYGTSPPQLALGPYHQTNLAAVEDLLQKRHKMNRQLKESLAQASAR 565
            TT+HT++  +P++AL+G  PP LA      + L    +  + +  +   +K  L +A AR
Sbjct: 654  TTFHTSLGMSPYQALHGIKPPLLAELLLPGSLLEGERNKQEAKAALLETIKSHLVKAQAR 713

Query: 564  MKHY 553
            MK++
Sbjct: 714  MKYF 717



 Score =  104 bits (259), Expect(2) = 0.0
 Identities = 54/135 (40%), Positives = 76/135 (56%)
 Frame = -3

Query: 554  MVYLKLHPYQPQTVVRGENHKLSPKYYGPFKVETRIGEVAYRLKLPARAKIHPTFHVSLL 375
            MVYLK+ PY+  ++    + KL  +YYGPF+V  RIG VAY+L LP  ++IH  FHVS L
Sbjct: 732  MVYLKMQPYRHNSLGLHSSLKLHSRYYGPFRVLERIGSVAYKLLLPVTSQIHHVFHVSQL 791

Query: 374  KKKIGDKAVCVTELPSGTNAQYLDKKPLKILQARMFIKGERAGAKWLIQWTDQLEDEATW 195
            KK +G +AV    LP       +   PL +L  R+  +      +W I W +  E  ATW
Sbjct: 792  KKHLGSRAVPEQGLPLIDAEGRILSTPLAVLDRRLIPRNNEPVVQWKIHWANLPESAATW 851

Query: 194  EDSEGNQQQYPTFKP 150
            ED+    + +P+F P
Sbjct: 852  EDAAFITKVFPSFTP 866


>gb|ABF94845.1| retrotransposon protein, putative, unclassified [Oryza sativa
            Japonica Group]
          Length = 937

 Score =  618 bits (1594), Expect(2) = 0.0
 Identities = 303/604 (50%), Positives = 406/604 (67%), Gaps = 3/604 (0%)
 Frame = -2

Query: 2358 RKYVLVFFDDILVYSEDMLSHTEHLGTVLQILRKHQLYAKLSKCSFGQTRVEYLGHIINQ 2179
            RK+VLVF DDILVYS D+ SH  HL  V  ILR+HQL+A+ SKCSF  T++EYLGHII+ 
Sbjct: 161  RKFVLVFMDDILVYSPDLDSHLHHLQQVFVILRQHQLFARRSKCSFACTQLEYLGHIISD 220

Query: 2178 QGVSADPRKIEAMQIWPTPVNLKQLRGFLGLTGYYRKFMKGYGXXXXXXXXXXXXDIFIW 1999
            +GVS DP K  AM  WP P ++ +LRGFLGLTGYYRKF++GY               F+W
Sbjct: 221  KGVSTDPEKTAAMLAWPVPTSVTELRGFLGLTGYYRKFVQGYSIIARPLTLLLKKKAFLW 280

Query: 1998 TETTEAAFNKLKMAMSTTPVLALPDFSQPFVIETDASYGGIGAVLMQKKRPLSYISKSMG 1819
            T+  + AF++LK AMS TP+LALP+F  PF +ETDA   G+GAVL Q+  P++Y SK++G
Sbjct: 281  TDAAQLAFDQLKTAMSNTPMLALPNFQLPFTLETDACAYGLGAVLSQQGHPIAYYSKTLG 340

Query: 1818 PRNLGMSIYEKELFALVTAVVKWRHYLEGHHFV--TDHQSLKYLLEQRITTPLQQKWLTK 1645
            P N  +SIYEKE  A++ AV KWR YL+   F+  T H+ L +L +Q + T LQQK +TK
Sbjct: 341  PVNQKLSIYEKEFLAIMMAVDKWRCYLQRGPFIIKTYHKILCHLDDQILGTELQQKAMTK 400

Query: 1644 LMGLDYEIQYRKGVENVVADALSRR-EEGECSALTQLTPTWVQEVMNSYEGDDTATEKIQ 1468
            LMGL Y  QY++GV N+VADALSR     +  A + + P W+QE++NSY  D  A + + 
Sbjct: 401  LMGLQYSFQYKRGVNNIVADALSRMPSSSQFCAFSVVQPIWIQEMINSYTVDPQAQQLLA 460

Query: 1467 SLVMDPTSDQSYQYCNGVLRYKGKLYIGSGGDIRRKMIQCIHSSQEGGHSEVQASIMRAK 1288
             L +   + Q Y    G++R++ K++IGS   +  K+IQ  H+S  GGHS + A+  R K
Sbjct: 461  ELAVHSPNSQGYSLTQGIIRFQNKIWIGSNAGLHTKLIQAFHASALGGHSGIAATYHRIK 520

Query: 1287 QHIFWPGMSMDIKMEVLQCDICQRCKGEHTPYPGLLHPLPIPQHPWSHISLDFIEGLPKS 1108
            +   WPG+ +D++  V QC +CQ+ K EH   PGLL PLPIP+  W  IS+DFIEGLP+S
Sbjct: 521  KLFAWPGLKLDVENFVKQCQVCQQAKHEHCRLPGLLAPLPIPKEAWQDISMDFIEGLPRS 580

Query: 1107 EGKDVIMVVVDRFTKYGHFITLAHPFTAKRAAQLFLDNISRLHGLPQSIISDRDKIFTSS 928
            +G + I+VVVDRFTKY +FI L HPFTA + A L    + + HG+P+SI+SDRD++FTS 
Sbjct: 581  DGYNAILVVVDRFTKYANFIPLRHPFTASQVAHLVDKTVFKTHGIPRSIVSDRDRLFTSK 640

Query: 927  FWQELFKLLRTKLQLSTAYHPQSDGQTERLNQCLEMYLRCMTHDKPKAWAKWIPLAEWWY 748
            FW  LF    T+LQ+STAYHPQ+DGQ ER+NQCLEMYLRCMT   PK W+ WI LAE+WY
Sbjct: 641  FWTTLFATWDTQLQMSTAYHPQTDGQIERVNQCLEMYLRCMTQANPKKWSHWIHLAEFWY 700

Query: 747  NTTYHTAIQRTPFEALYGTSPPQLALGPYHQTNLAAVEDLLQKRHKMNRQLKESLAQASA 568
            NT YHT +  +P +AL+G  P    +       L  V D+  +R  ++  L++ L +A  
Sbjct: 701  NTNYHTYLGCSPHKALFGVDPHYSQVPDLTLATLPDVVDVQTERQHLSEFLQQQLTRAQL 760

Query: 567  RMKH 556
            RMK+
Sbjct: 761  RMKN 764



 Score =  106 bits (264), Expect(2) = 0.0
 Identities = 56/137 (40%), Positives = 75/137 (54%)
 Frame = -3

Query: 551  VYLKLHPYQPQTVVRGENHKLSPKYYGPFKVETRIGEVAYRLKLPARAKIHPTFHVSLLK 372
            V+LKL PY   +VV     KL+ K++GPF V  RIG  AYRL LPA + +HP FHVS LK
Sbjct: 781  VFLKLQPYAQSSVVNRPYPKLAYKFFGPFTVLERIGVAAYRLDLPASSTVHPVFHVSQLK 840

Query: 371  KKIGDKAVCVTELPSGTNAQYLDKKPLKILQARMFIKGERAGAKWLIQWTDQLEDEATWE 192
             ++ D     T LPS       D  P  IL+ R+  +   A  + L++W+    D ATWE
Sbjct: 841  AQVPDHTPVYTSLPSQVVLDAADVVPEAILERRLVKRSNAAHVQVLLKWSSLPADHATWE 900

Query: 191  DSEGNQQQYPTFKPWGQ 141
            D    + ++P    WGQ
Sbjct: 901  DYHVVKTRFPDAPAWGQ 917


>gb|AAL76001.1|AF466646_9 putative gag-pol polyprotein [Zea mays]
          Length = 2396

 Score =  608 bits (1568), Expect(2) = 0.0
 Identities = 296/605 (48%), Positives = 400/605 (66%), Gaps = 5/605 (0%)
 Frame = -2

Query: 2358 RKYVLVFFDDILVYSEDMLSHTEHLGTVLQILRKHQLYAKLSKCSFGQTRVEYLGHIINQ 2179
            RK  LVFFDDIL+YS+    H  HL  VLQ+L       KLSKC F +T   YLGHII++
Sbjct: 787  RKCALVFFDDILIYSKSFEEHLLHLQKVLQLLLSDNWKVKLSKCEFAKTNTAYLGHIISE 846

Query: 2178 QGVSADPRKIEAMQIWPTPVNLKQLRGFLGLTGYYRKFMKGYGXXXXXXXXXXXXD-IFI 2002
            QGVS  P KI+A+  W  P + K+LR FLGL G+YRKF+K +G              +F+
Sbjct: 847  QGVSTYPSKIQAISSWAVPTSAKELRCFLGLAGFYRKFVKHFGIISRPLFDLLKKHTLFV 906

Query: 2001 WTETTEAAFNKLKMAMSTTPVLALPDFSQPFVIETDASYGGIGAVLMQKKRPLSYISKSM 1822
            WT     AF  LK A+ T PVLALPDFSQPF I TDASY G+GAVLMQ   PL+++SK++
Sbjct: 907  WTVDHSKAFEVLKQALVTAPVLALPDFSQPFCIHTDASYYGVGAVLMQSGHPLAFLSKAL 966

Query: 1821 GPRNLGMSIYEKELFALVTAVVKWRHYLEGHHFV--TDHQSLKYLLEQRITTPLQQKWLT 1648
            GP+N G+S YEKE  A++ A+ +WR YL+   F+  TDH+SL  L EQR+ T  QQK  T
Sbjct: 967  GPKNQGLSTYEKEYMAIILAIAQWRSYLQLAEFIIYTDHRSLAQLNEQRLHTIWQQKMYT 1026

Query: 1647 KLMGLDYEIQYRKGVENVVADALSRR--EEGECSALTQLTPTWVQEVMNSYEGDDTATEK 1474
            KL GL Y+I YRKGV+N  ADALSR+  E+  C A++   PTW+QEV+  Y+ D T+ + 
Sbjct: 1027 KLAGLQYKIVYRKGVDNGAADALSRKVQEDSHCCAISHSVPTWLQEVVEGYDKDPTSKQL 1086

Query: 1473 IQSLVMDPTSDQSYQYCNGVLRYKGKLYIGSGGDIRRKMIQCIHSSQEGGHSEVQASIMR 1294
            +  L+++      +    G++R+K ++++G    +++K++Q +H +  GGHS   A+  +
Sbjct: 1087 LAQLILNSADKAPFSLHQGIIRHKNRIWLGGNLQLQQKVLQAMHDTAVGGHSGAPATYHK 1146

Query: 1293 AKQHIFWPGMSMDIKMEVLQCDICQRCKGEHTPYPGLLHPLPIPQHPWSHISLDFIEGLP 1114
             KQ  +WPGM  D+   V  C +CQ+ K +   YPGLL PL +P   W  ISLDFIEGLP
Sbjct: 1147 VKQMFYWPGMRADVLQYVQSCTVCQQSKPDRAKYPGLLQPLEVPPQAWHTISLDFIEGLP 1206

Query: 1113 KSEGKDVIMVVVDRFTKYGHFITLAHPFTAKRAAQLFLDNISRLHGLPQSIISDRDKIFT 934
            +S   + I+VVVD+F+KYGHF+ L HPFTA + A++FLDN+ +LHGLP +IISDRD+IFT
Sbjct: 1207 RSAHYNCILVVVDKFSKYGHFLPLLHPFTAAKVARVFLDNVYKLHGLPVNIISDRDRIFT 1266

Query: 933  SSFWQELFKLLRTKLQLSTAYHPQSDGQTERLNQCLEMYLRCMTHDKPKAWAKWIPLAEW 754
            SSFWQ+LF++  T L +S++YHPQSDGQTERLNQCLE +LRC  H  P  W+ W+ +AE+
Sbjct: 1267 SSFWQQLFQITGTNLSMSSSYHPQSDGQTERLNQCLETFLRCYVHTCPSRWSAWLSVAEY 1326

Query: 753  WYNTTYHTAIQRTPFEALYGTSPPQLALGPYHQTNLAAVEDLLQKRHKMNRQLKESLAQA 574
            WYNTT H+ + RTPFE LYG +P    +          +E  L++R  M + +K  L +A
Sbjct: 1327 WYNTTVHSTLGRTPFEVLYGHTPRHFGILVDTVVPQPELETWLKERELMTKVIKLHLHRA 1386

Query: 573  SARMK 559
              RMK
Sbjct: 1387 QDRMK 1391



 Score =  110 bits (274), Expect(2) = 0.0
 Identities = 59/137 (43%), Positives = 77/137 (56%)
 Frame = -3

Query: 551  VYLKLHPYQPQTVVRGENHKLSPKYYGPFKVETRIGEVAYRLKLPARAKIHPTFHVSLLK 372
            VYLKL PY   +V    NHKLS K++GPF++  R+G VAYRL LPA + IHP FHVS LK
Sbjct: 1409 VYLKLQPYIQSSVATRSNHKLSFKFFGPFQITDRLGSVAYRLALPASSSIHPIFHVSQLK 1468

Query: 371  KKIGDKAVCVTELPSGTNAQYLDKKPLKILQARMFIKGERAGAKWLIQWTDQLEDEATWE 192
            + IG       +LP       +   P +ILQ R   +G    A+  + W+   ED ATWE
Sbjct: 1469 RVIGRDQRASPQLPQDVGPIQV---PTRILQRRFIDRGGELIAQVKVVWSGMTEDLATWE 1525

Query: 191  DSEGNQQQYPTFKPWGQ 141
            D E  + ++P    W Q
Sbjct: 1526 DVEALRARFPKALIWDQ 1542


>emb|CAH66499.1| H0321H01.8 [Oryza sativa Indica Group]
          Length = 1602

 Score =  604 bits (1558), Expect(2) = 0.0
 Identities = 295/608 (48%), Positives = 398/608 (65%), Gaps = 6/608 (0%)
 Frame = -2

Query: 2358 RKYVLVFFDDILVYSEDMLSHTEHLGTVLQILRKHQLYAKLSKCSFGQTRVEYLGHIINQ 2179
            RK+ LVFFDDIL+YS  + SH EHL  VLQ+LR H    KLSKCSFGQ ++ YLGHII  
Sbjct: 768  RKFALVFFDDILIYSPTLSSHLEHLKQVLQLLRNHHWKVKLSKCSFGQQQLSYLGHIIGV 827

Query: 2178 QGVSADPRKIEAMQIWPTPVNLKQLRGFLGLTGYYRKFMKGYGXXXXXXXXXXXXDI-FI 2002
             GV+ DP K++ +  W  PV+ K+LRGFLGL GYYRKF+K +G             + ++
Sbjct: 828  NGVATDPSKVQDVLDWAVPVSTKKLRGFLGLAGYYRKFVKNFGIISKPLTQLLRKGVPYV 887

Query: 2001 WTETTEAAFNKLKMAMSTTPVLALPDFSQPFVIETDASYGGIGAVLMQKKRPLSYISKSM 1822
            WT  T+ AF+ LK A+++ PVL+LPDF + F +ETDAS  GIGAVL Q K P++Y+SK++
Sbjct: 888  WTTETDNAFHTLKQALASAPVLSLPDFQKTFTVETDASDCGIGAVLSQDKHPIAYVSKAL 947

Query: 1821 GPRNLGMSIYEKELFALVTAVVKWRHYLEGHHFV--TDHQSLKYLLEQRITTPLQQKWLT 1648
            GPR  G+S YEKE  A++ AV  WR YL+   F+  TDH SL +L +QR+ TP Q K  T
Sbjct: 948  GPRTRGLSTYEKECMAILLAVDHWRSYLQHGEFIILTDHHSLMHLSDQRLHTPWQHKAFT 1007

Query: 1647 KLMGLDYEIQYRKGVENVVADALSRR---EEGECSALTQLTPTWVQEVMNSYEGDDTATE 1477
            KL+GL Y+I YRKG  N  ADALSR+      E  A++   P W+ EV   YE D  A +
Sbjct: 1008 KLLGLQYKICYRKGSSNAAADALSRKFQDSNSEIFAISSSVPQWLMEVTQGYEKDAQAAK 1067

Query: 1476 KIQSLVMDPTSDQSYQYCNGVLRYKGKLYIGSGGDIRRKMIQCIHSSQEGGHSEVQASIM 1297
             + +L + P     Y   NG++RYK ++++G+  +++ K+I+ +H+S  GGHS    +  
Sbjct: 1068 LLSTLAIHPEKHIHYFLDNGIIRYKNRIWVGNNPELQLKLIRELHASPVGGHSGFPVTYR 1127

Query: 1296 RAKQHIFWPGMSMDIKMEVLQCDICQRCKGEHTPYPGLLHPLPIPQHPWSHISLDFIEGL 1117
            + KQ   WP M   IK  V +C +C + K +   YPGLL PLP+P+  W  +SLDFIEGL
Sbjct: 1128 KIKQLFAWPNMKKMIKESVQRCQVCLQAKPDRLKYPGLLQPLPVPEGSWQAVSLDFIEGL 1187

Query: 1116 PKSEGKDVIMVVVDRFTKYGHFITLAHPFTAKRAAQLFLDNISRLHGLPQSIISDRDKIF 937
            PKS G + I+VVVDRF+KY HF+ L HPFTA   AQ ++ +I +LHGLPQ+I+SDRDKIF
Sbjct: 1188 PKSAGYNCILVVVDRFSKYAHFVALKHPFTAIDVAQAYMFHIYKLHGLPQTIVSDRDKIF 1247

Query: 936  TSSFWQELFKLLRTKLQLSTAYHPQSDGQTERLNQCLEMYLRCMTHDKPKAWAKWIPLAE 757
            TS  W++LF    TKL  S+AYHPQSDGQTER+NQCLE+YLRC  H  P  W  W+ LAE
Sbjct: 1248 TSQLWEQLFLRAGTKLHYSSAYHPQSDGQTERVNQCLEIYLRCFVHSTPSKWYSWLHLAE 1307

Query: 756  WWYNTTYHTAIQRTPFEALYGTSPPQLALGPYHQTNLAAVEDLLQKRHKMNRQLKESLAQ 577
            +WYN+TYH+++  TPFE LYG  P    +       +  +   L+ R  M + +++ L +
Sbjct: 1308 YWYNSTYHSSLGTTPFEVLYGYPPNHFGISS-RDCAIPELSVWLRDRKFMQQLVQQHLHR 1366

Query: 576  ASARMKHY 553
            A  +MKH+
Sbjct: 1367 AQQQMKHF 1374



 Score =  113 bits (283), Expect(2) = 0.0
 Identities = 60/137 (43%), Positives = 80/137 (58%)
 Frame = -3

Query: 551  VYLKLHPYQPQTVVRGENHKLSPKYYGPFKVETRIGEVAYRLKLPARAKIHPTFHVSLLK 372
            VYLKL PY   +V    NHKL+ KYYGPF+V  ++G VAY+L+LP  + +HP FHVSLLK
Sbjct: 1390 VYLKLQPYVQSSVAPRANHKLAFKYYGPFQVIDKLGTVAYKLQLPETSSVHPVFHVSLLK 1449

Query: 371  KKIGDKAVCVTELPSGTNAQYLDKKPLKILQARMFIKGERAGAKWLIQWTDQLEDEATWE 192
               G       +LPS   +  L   PL IL  R+  KG     + LI W+  + ++ATWE
Sbjct: 1450 PAKGFTQPAFLQLPSEVVSWQL---PLAILDQRLAKKGNSVITQVLIHWSHTVPEQATWE 1506

Query: 191  DSEGNQQQYPTFKPWGQ 141
            D E  + ++P    WGQ
Sbjct: 1507 DLEDLKTRFPNALAWGQ 1523


>gb|AAX95226.1| retrotransposon protein, putative, unclassified [Oryza sativa
            Japonica Group]
          Length = 1513

 Score =  597 bits (1538), Expect(2) = 0.0
 Identities = 286/568 (50%), Positives = 388/568 (68%), Gaps = 7/568 (1%)
 Frame = -2

Query: 2358 RKYVLVFFDDILVYSEDMLSHTEHLGTVLQILRKHQLYAKLSKCSFGQTRVEYLGHIINQ 2179
            RK+VLVFFDDIL+YS+D   H EH+  VLQ+L+ + L  K  KC+FG + V YLGHII+Q
Sbjct: 788  RKFVLVFFDDILIYSKDREEHKEHIRLVLQVLKANNLVIKPKKCAFGLSSVSYLGHIISQ 847

Query: 2178 QGVSADPRKIEAMQIWPTPVNLKQLRGFLGLTGYYRKFMKGYGXXXXXXXXXXXXDIFIW 1999
             GV+ DP K+E +  WP P N+  LR FLG+TGYYR+F++GY             + F W
Sbjct: 848  NGVATDPGKVEKIVSWPIPKNVTDLRKFLGMTGYYRRFIQGYVLICRPLHDMLKKEGFQW 907

Query: 1998 TETTEAAFNKLKMAMSTTPVLALPDFSQPFVIETDASYGGIGAVLMQKKRPLSYISKSMG 1819
             E    AF  LK  M ++PVL LPDFS+ F IE DA   GIGAVLMQ  RP+++ SKS+G
Sbjct: 908  GEKQTEAFKFLKQKMCSSPVLTLPDFSKEFTIEADACGTGIGAVLMQGDRPIAFYSKSLG 967

Query: 1818 PRNLGMSIYEKELFALVTAVVKWRHYLEGHHFV--TDHQSLKYLLEQRITTPLQQKWLTK 1645
            P+    SIYEKE  A++ A+ KWRHY  G   V  TD QSLK+++ QR+   +Q K L K
Sbjct: 968  PKAAAQSIYEKEAMAILEALKKWRHYFLGSKLVIKTDQQSLKHMMNQRLVEGIQHKLLLK 1027

Query: 1644 LMGLDYEIQYRKGVENVVADALSRREEGE-----CSALTQLTPTWVQEVMNSYEGDDTAT 1480
            LM  DY I+Y+ G +NVVADALSR  + +     C+A+T + P W+ +V NSYEGD  A 
Sbjct: 1028 LMEYDYIIEYKAGKDNVVADALSRLPQDQLQTEICNAITVVIPKWIIDVQNSYEGDVQAH 1087

Query: 1479 EKIQSLVMDPTSDQSYQYCNGVLRYKGKLYIGSGGDIRRKMIQCIHSSQEGGHSEVQASI 1300
            + +  +  +   DQ Y + NG+LR+KG++Y+G    IR  +I+  H S  GGHS ++A+ 
Sbjct: 1088 KILSMIGTNSDPDQHYSFENGILRFKGRIYVGEETSIRTNLIRDYHCSAFGGHSGMRATH 1147

Query: 1299 MRAKQHIFWPGMSMDIKMEVLQCDICQRCKGEHTPYPGLLHPLPIPQHPWSHISLDFIEG 1120
             R K   +WPG+   ++M + +C +CQ  K EH   PGLL+PL +    W+HI++DFIEG
Sbjct: 1148 HRIKALFYWPGLKKTVEMFIRECPVCQITKVEHIHIPGLLNPLEVLDMAWTHITMDFIEG 1207

Query: 1119 LPKSEGKDVIMVVVDRFTKYGHFITLAHPFTAKRAAQLFLDNISRLHGLPQSIISDRDKI 940
            LPKS+ KD I+VVVDR TKY HF+ L+HP++ ++  ++F++NI RLHG+P +II DRD+I
Sbjct: 1208 LPKSKWKDAILVVVDRLTKYAHFLALSHPYSVEQVVEIFMNNIHRLHGMPMAIIIDRDRI 1267

Query: 939  FTSSFWQELFKLLRTKLQLSTAYHPQSDGQTERLNQCLEMYLRCMTHDKPKAWAKWIPLA 760
            FTS  +QE+FK ++ +L+ ST+YHPQ+DGQTER+NQCLE YLR MT  +P  W  W+ LA
Sbjct: 1268 FTSQLFQEIFKSMKVQLRFSTSYHPQTDGQTERVNQCLESYLRNMTFQEPHQWYSWLSLA 1327

Query: 759  EWWYNTTYHTAIQRTPFEALYGTSPPQL 676
             WWYNTTYHT++Q TPF+ALYG  PPQ+
Sbjct: 1328 GWWYNTTYHTSLQMTPFQALYGYPPPQI 1355



 Score =  120 bits (300), Expect(2) = 0.0
 Identities = 62/135 (45%), Positives = 83/135 (61%)
 Frame = -3

Query: 554  MVYLKLHPYQPQTVVRGENHKLSPKYYGPFKVETRIGEVAYRLKLPARAKIHPTFHVSLL 375
            MVY+KL PY+        + KL  K+YGPFKV  +IG+VAY+L+LP  A IHP FHVS L
Sbjct: 1379 MVYIKLQPYRQTAFGIRGSLKLRSKFYGPFKVLEKIGQVAYKLQLPEDASIHPVFHVSQL 1438

Query: 374  KKKIGDKAVCVTELPSGTNAQYLDKKPLKILQARMFIKGERAGAKWLIQWTDQLEDEATW 195
            KK +G +AV ++ LPS      +  +P+ +LQ RM  +   A  +WLI W +    +ATW
Sbjct: 1439 KKHLGQRAVPMSNLPSMGPDGQIKTQPVAVLQRRMIPRNGVAVTQWLILWENLGPADATW 1498

Query: 194  EDSEGNQQQYPTFKP 150
            ED+   Q  YPTF P
Sbjct: 1499 EDAAVIQSMYPTFHP 1513


>gb|ABA91843.2| retrotransposon protein, putative, unclassified [Oryza sativa
            Japonica Group]
          Length = 1411

 Score =  597 bits (1538), Expect(2) = 0.0
 Identities = 286/568 (50%), Positives = 388/568 (68%), Gaps = 7/568 (1%)
 Frame = -2

Query: 2358 RKYVLVFFDDILVYSEDMLSHTEHLGTVLQILRKHQLYAKLSKCSFGQTRVEYLGHIINQ 2179
            RK+VLVFFDDIL+YS+D   H EH+  VLQ+L+ + L  K  KC+FG + V YLGHII+Q
Sbjct: 686  RKFVLVFFDDILIYSKDREEHKEHIRLVLQVLKANNLVIKPKKCAFGLSSVSYLGHIISQ 745

Query: 2178 QGVSADPRKIEAMQIWPTPVNLKQLRGFLGLTGYYRKFMKGYGXXXXXXXXXXXXDIFIW 1999
             GV+ DP K+E +  WP P N+  LR FLG+TGYYR+F++GY             + F W
Sbjct: 746  NGVATDPGKVEKIVSWPIPKNVTDLRKFLGMTGYYRRFIQGYVLICRPLHDMLKKEGFQW 805

Query: 1998 TETTEAAFNKLKMAMSTTPVLALPDFSQPFVIETDASYGGIGAVLMQKKRPLSYISKSMG 1819
             E    AF  LK  M ++PVL LPDFS+ F IE DA   GIGAVLMQ  RP+++ SKS+G
Sbjct: 806  GEKQTEAFKFLKQKMCSSPVLTLPDFSKEFTIEADACGTGIGAVLMQGDRPIAFYSKSLG 865

Query: 1818 PRNLGMSIYEKELFALVTAVVKWRHYLEGHHFV--TDHQSLKYLLEQRITTPLQQKWLTK 1645
            P+    SIYEKE  A++ A+ KWRHY  G   V  TD QSLK+++ QR+   +Q K L K
Sbjct: 866  PKAAAQSIYEKEAMAILEALKKWRHYFLGSKLVIKTDQQSLKHMMNQRLVEGIQHKLLLK 925

Query: 1644 LMGLDYEIQYRKGVENVVADALSRREEGE-----CSALTQLTPTWVQEVMNSYEGDDTAT 1480
            LM  DY I+Y+ G +NVVADALSR  + +     C+A+T + P W+ +V NSYEGD  A 
Sbjct: 926  LMEYDYIIEYKAGKDNVVADALSRLPQDQLQTEICNAITVVIPKWIIDVQNSYEGDVQAH 985

Query: 1479 EKIQSLVMDPTSDQSYQYCNGVLRYKGKLYIGSGGDIRRKMIQCIHSSQEGGHSEVQASI 1300
            + +  +  +   DQ Y + NG+LR+KG++Y+G    IR  +I+  H S  GGHS ++A+ 
Sbjct: 986  KILSMIGTNSDPDQHYSFENGILRFKGRIYVGEETSIRTNLIRDYHCSAFGGHSGMRATH 1045

Query: 1299 MRAKQHIFWPGMSMDIKMEVLQCDICQRCKGEHTPYPGLLHPLPIPQHPWSHISLDFIEG 1120
             R K   +WPG+   ++M + +C +CQ  K EH   PGLL+PL +    W+HI++DFIEG
Sbjct: 1046 HRIKALFYWPGLKKTVEMFIRECPVCQITKVEHIHIPGLLNPLEVLDMAWTHITMDFIEG 1105

Query: 1119 LPKSEGKDVIMVVVDRFTKYGHFITLAHPFTAKRAAQLFLDNISRLHGLPQSIISDRDKI 940
            LPKS+ KD I+VVVDR TKY HF+ L+HP++ ++  ++F++NI RLHG+P +II DRD+I
Sbjct: 1106 LPKSKWKDAILVVVDRLTKYAHFLALSHPYSVEQVVEIFMNNIHRLHGMPMAIIIDRDRI 1165

Query: 939  FTSSFWQELFKLLRTKLQLSTAYHPQSDGQTERLNQCLEMYLRCMTHDKPKAWAKWIPLA 760
            FTS  +QE+FK ++ +L+ ST+YHPQ+DGQTER+NQCLE YLR MT  +P  W  W+ LA
Sbjct: 1166 FTSQLFQEIFKSMKVQLRFSTSYHPQTDGQTERVNQCLESYLRNMTFQEPHQWYSWLSLA 1225

Query: 759  EWWYNTTYHTAIQRTPFEALYGTSPPQL 676
             WWYNTTYHT++Q TPF+ALYG  PPQ+
Sbjct: 1226 GWWYNTTYHTSLQMTPFQALYGYPPPQI 1253



 Score =  120 bits (300), Expect(2) = 0.0
 Identities = 62/135 (45%), Positives = 83/135 (61%)
 Frame = -3

Query: 554  MVYLKLHPYQPQTVVRGENHKLSPKYYGPFKVETRIGEVAYRLKLPARAKIHPTFHVSLL 375
            MVY+KL PY+        + KL  K+YGPFKV  +IG+VAY+L+LP  A IHP FHVS L
Sbjct: 1277 MVYIKLQPYRQTAFGIRGSLKLRSKFYGPFKVLEKIGQVAYKLQLPEDASIHPVFHVSQL 1336

Query: 374  KKKIGDKAVCVTELPSGTNAQYLDKKPLKILQARMFIKGERAGAKWLIQWTDQLEDEATW 195
            KK +G +AV ++ LPS      +  +P+ +LQ RM  +   A  +WLI W +    +ATW
Sbjct: 1337 KKHLGQRAVPMSNLPSMGPDGQIKTQPVAVLQRRMIPRNGVAVTQWLILWENLGPADATW 1396

Query: 194  EDSEGNQQQYPTFKP 150
            ED+   Q  YPTF P
Sbjct: 1397 EDAAVIQSMYPTFHP 1411


>gb|AAG51046.1|AC069473_8 gypsy/Ty-3 retroelement polyprotein; 69905-74404 [Arabidopsis
            thaliana] gi|10998138|dbj|BAB03109.1| retroelement pol
            polyprotein [Arabidopsis thaliana]
          Length = 1499

 Score =  604 bits (1558), Expect(2) = 0.0
 Identities = 302/606 (49%), Positives = 400/606 (66%), Gaps = 4/606 (0%)
 Frame = -2

Query: 2358 RKYVLVFFDDILVYSEDMLSHTEHLGTVLQILRKHQLYAKLSKCSFGQTRVEYLGHIINQ 2179
            RK+VLVFFDDILVYS  +  H +HL  V +++R ++L+AKLSKC+F   +VEYLGH I+ 
Sbjct: 747  RKFVLVFFDDILVYSSSLEEHRQHLKQVFEVMRANKLFAKLSKCAFAVPKVEYLGHFISA 806

Query: 2178 QGVSADPRKIEAMQIWPTPVNLKQLRGFLGLTGYYRKFMKGYGXXXXXXXXXXXXDIFIW 1999
            QG+  DP KI+A++ WP P  LKQLRGFLGL GYYR+F++ +G            D F W
Sbjct: 807  QGIETDPAKIKAVKEWPQPTTLKQLRGFLGLAGYYRRFVRSFGVIAGPLHALTKTDAFEW 866

Query: 1998 TETTEAAFNKLKMAMSTTPVLALPDFSQPFVIETDASYGGIGAVLMQKKRPLSYISKSMG 1819
            T   + AF  LK A+   PVL+LP F + FV+ETDA   GIGAVLMQ+  PL+YIS+ + 
Sbjct: 867  TAVAQQAFEDLKAALCQAPVLSLPLFDKQFVVETDACGQGIGAVLMQEGHPLAYISRQLK 926

Query: 1818 PRNLGMSIYEKELFALVTAVVKWRHYLEGHHFV--TDHQSLKYLLEQRITTPLQQKWLTK 1645
             + L +SIYEKEL A++ AV KWRHYL   HF+  TD +SLKYLLEQR+ TP+QQ+WL K
Sbjct: 927  GKQLHLSIYEKELLAVIFAVRKWRHYLLQSHFIIKTDQRSLKYLLEQRLNTPIQQQWLPK 986

Query: 1644 LMGLDYEIQYRKGVENVVADALSRREEGEC--SALTQLTPTWVQEVMNSYEGDDTATEKI 1471
            L+  DYEIQYR+G ENVVADALSR E  E    A+T +    ++++   Y  D    + I
Sbjct: 987  LLEFDYEIQYRQGKENVVADALSRVEGSEVLHMAMTVVECDLLKDIQAGYANDSQLQDII 1046

Query: 1470 QSLVMDPTSDQSYQYCNGVLRYKGKLYIGSGGDIRRKMIQCIHSSQEGGHSEVQASIMRA 1291
             +L  DP S + + +   +LR K K+ + +  +I+  ++  +H S  GGHS    +  R 
Sbjct: 1047 TALQRDPDSKKYFSWSQNILRRKSKIVVPANDNIKNTILLWLHGSGVGGHSGRDVTHQRV 1106

Query: 1290 KQHIFWPGMSMDIKMEVLQCDICQRCKGEHTPYPGLLHPLPIPQHPWSHISLDFIEGLPK 1111
            K   +W GM  DI+  +  C  CQ+CK +    PGLL PLPIP   WS +S+DFIEGLP 
Sbjct: 1107 KGLFYWKGMIKDIQAYIRSCGTCQQCKSDPAASPGLLQPLPIPDTIWSEVSMDFIEGLPV 1166

Query: 1110 SEGKDVIMVVVDRFTKYGHFITLAHPFTAKRAAQLFLDNISRLHGLPQSIISDRDKIFTS 931
            S GK VIMVVVDR +K  HFI L+HP++A   A  +LDN+ +LHG P SI+SDRD +FTS
Sbjct: 1167 SGGKTVIMVVVDRLSKAAHFIALSHPYSALTVAHAYLDNVFKLHGCPTSIVSDRDVVFTS 1226

Query: 930  SFWQELFKLLRTKLQLSTAYHPQSDGQTERLNQCLEMYLRCMTHDKPKAWAKWIPLAEWW 751
             FW+E F L    L+L++AYHPQSDGQTE +N+CLE YLRCM HD+P+ W+KW+ LAE+W
Sbjct: 1227 EFWREFFTLQGVALKLTSAYHPQSDGQTEVVNRCLETYLRCMCHDRPQLWSKWLALAEYW 1286

Query: 750  YNTTYHTAIQRTPFEALYGTSPPQLALGPYHQTNLAAVEDLLQKRHKMNRQLKESLAQAS 571
            YNT YH++ + TPFE +YG  PP        ++ +A V   LQ+R  M   LK  L +A 
Sbjct: 1287 YNTNYHSSSRMTPFEIVYGQVPPVHLPYLPGESKVAVVARSLQEREDMLLFLKFHLMRAQ 1346

Query: 570  ARMKHY 553
             RMK +
Sbjct: 1347 HRMKQF 1352



 Score =  111 bits (278), Expect(2) = 0.0
 Identities = 57/133 (42%), Positives = 87/133 (65%)
 Frame = -3

Query: 551  VYLKLHPYQPQTVVRGENHKLSPKYYGPFKVETRIGEVAYRLKLPARAKIHPTFHVSLLK 372
            VY+KL PY+ Q+VV   N KLSPKY+GP+K+  R GEVAY+L LP+ +++HP FHVS LK
Sbjct: 1368 VYVKLQPYRQQSVVMRANQKLSPKYFGPYKIIDRCGEVAYKLALPSYSQVHPVFHVSQLK 1427

Query: 371  KKIGDKAVCVTELPSGTNAQYLDKKPLKILQARMFIKGERAGAKWLIQWTDQLEDEATWE 192
              +G+ +  V  LPS       +K P K+++ +M  +  +A  K L++W+++  +EATWE
Sbjct: 1428 VLVGNVSTTV-HLPS-VMQDVFEKVPEKVVERKMVNRQGKAVTKVLVKWSNEPLEEATWE 1485

Query: 191  DSEGNQQQYPTFK 153
                 Q+ +P F+
Sbjct: 1486 FLFDLQKTFPEFE 1498


>gb|AAL68644.1|AF458768_1 polyprotein [Oryza sativa Japonica Group]
          Length = 933

 Score =  602 bits (1553), Expect(2) = 0.0
 Identities = 297/609 (48%), Positives = 406/609 (66%), Gaps = 9/609 (1%)
 Frame = -2

Query: 2358 RKYVLVFFDDILVYSEDMLSHTEHLGTVLQILRKHQLYAKLSKCSFGQTRVEYLGHIINQ 2179
            RK  LVFFDDIL+YS DM SH +HL  VLQ+L  HQ   KLSKC F QT++ YLGHII+ 
Sbjct: 124  RKCALVFFDDILIYSPDMNSHLDHLKQVLQLLDTHQWKVKLSKCDFAQTQISYLGHIISG 183

Query: 2178 QGVSADPRKIEAMQIWPTPVNLKQLRGFLGLTGYYRKFMKGYGXXXXXXXXXXXXDI-FI 2002
            QGVS DP KI+++  W  P  LK+LRGFLGL GYYRKF+K +G            D  F+
Sbjct: 184  QGVSTDPSKIQSIVDWAVPTTLKKLRGFLGLAGYYRKFVKDFGTLSKPLTQLLKKDAPFV 243

Query: 2001 WTETTEAAFNKLKMAMSTTPVLALPDFSQPFVIETDASYGGIGAVLMQKKRPLSYISKSM 1822
            W+     AF  LK A+++TPVLALP+F Q F IETDAS  GIGAVL Q + P++++SK++
Sbjct: 244  WSAEVNQAFQALKHALTSTPVLALPNFQQGFTIETDASDIGIGAVLSQNQHPVAFVSKAL 303

Query: 1821 GPRNLGMSIYEKELFALVTAVVKWRHYLEGHHF--VTDHQSLKYLLEQRITTPLQQKWLT 1648
            GPR  G+S YEKE  A++ AV  WR YL+   F  +TDH SL +L EQR+ TP QQK  T
Sbjct: 304  GPRTQGLSTYEKECLAIMMAVDHWRPYLQFQEFLIITDHHSLMHLTEQRLHTPWQQKAFT 363

Query: 1647 KLMGLDYEIQYRKGVENVVADALSRR---EEGECSALTQLTPTWVQEVMNSYEGDDTATE 1477
            KL GL ++I YRKG  N  ADALSR    E  E   ++  +P W+Q++++ Y+ D  A  
Sbjct: 364  KLSGLQFQIVYRKGKHNAAADALSRHVPEETSEFLGISTCSPVWLQDILHGYDQDPLALS 423

Query: 1476 KIQSLVMDPTSDQSYQYCNGVLRYKGKLYIGSGGDIRRKMIQCIHSSQEGGHSEVQASIM 1297
             +  L ++P+S   Y    G++++KGK+++G+  +I++++I  +H S  GGHS    +  
Sbjct: 424  LLTGLAVNPSSYPHYSLSKGLIKHKGKVWVGNNSNIQQQIISALHDSPLGGHSGFPVTYK 483

Query: 1296 RAKQHIFWPGMSMDIKMEVLQCDICQRCKGEHTPYPGLLHPLPIPQHPWSHISLDFIEGL 1117
            R K    WP M + ++ ++  C +C + K + + YPGLL PLP+P   W  IS+DFIEGL
Sbjct: 484  RIKSLFSWPHMKLTVQKQLASCAVCLQAKPDRSKYPGLLQPLPVPDGAWQIISMDFIEGL 543

Query: 1116 PKSEGKDVIMVVVDRFTKYGHFITLAHPFTAKRAAQLFLDNISRLHGLPQSIISDRDKIF 937
            PKS  +D I+VVVD+F+KY HF+ L+HPF+A   A++F+ N+ +LHGLPQ IISDRDKIF
Sbjct: 544  PKSYHQDCILVVVDKFSKYAHFMPLSHPFSALDVAKVFMLNVYKLHGLPQIIISDRDKIF 603

Query: 936  TSSFWQELFKLLRTKLQLSTAYHPQSDGQTERLNQCLEMYLRCMTHDKPKAWAKWIPLAE 757
            TS+ W++LF    TKL LS+AYHPQSDGQTER+NQCLE++LRC  H  P  W+ W+ LAE
Sbjct: 604  TSALWEQLFLRSGTKLHLSSAYHPQSDGQTERVNQCLEIFLRCFVHATPAKWSLWLHLAE 663

Query: 756  WWYNTTYHTAIQRTPFEALYGTSPPQLALGPYHQTNLAAVEDL---LQKRHKMNRQLKES 586
            +WYN++YH+A+ +TPFE LYG  P    +    + +   + DL   L +RH M + L++ 
Sbjct: 664  FWYNSSYHSALNKTPFEVLYGYPPSHFGI----RADACVISDLDSWLSERHLMTQLLRQH 719

Query: 585  LAQASARMK 559
            L +A   MK
Sbjct: 720  LNRAQQVMK 728



 Score =  113 bits (282), Expect(2) = 0.0
 Identities = 58/138 (42%), Positives = 89/138 (64%), Gaps = 1/138 (0%)
 Frame = -3

Query: 551  VYLKLHPYQPQTVVRGENHKLSPKYYGPFKVETRIGEVAYRLKLPARAKIHPTFHVSLLK 372
            V+LKL PY   +V +  NHKLS +Y+GP+++ +++G VAY+L+LPA + +HP FHVS LK
Sbjct: 746  VFLKLQPYVQSSVAKRANHKLSFRYFGPYQILSKVGSVAYKLQLPADSMVHPVFHVSQLK 805

Query: 371  KKIGDKAVCVTELPSGT-NAQYLDKKPLKILQARMFIKGERAGAKWLIQWTDQLEDEATW 195
                 K    ++LP+ T + QY    P++IL  R+  KG +   + L+ W++    EATW
Sbjct: 806  GTQNFKHSIQSQLPNITDHIQY----PVQILDTRIQKKGNKVVRQILVCWSNLPAVEATW 861

Query: 194  EDSEGNQQQYPTFKPWGQ 141
            ED E  +Q++P+  PWGQ
Sbjct: 862  EDEEELKQRFPSALPWGQ 879


>emb|CAD40278.2| OSJNBb0062H02.17 [Oryza sativa Japonica Group]
            gi|38347666|emb|CAE05600.2| OSJNBa0054D14.1 [Oryza sativa
            Japonica Group]
          Length = 1629

 Score =  608 bits (1568), Expect(2) = 0.0
 Identities = 291/606 (48%), Positives = 405/606 (66%), Gaps = 6/606 (0%)
 Frame = -2

Query: 2358 RKYVLVFFDDILVYSEDMLSHTEHLGTVLQILRKHQLYAKLSKCSFGQTRVEYLGHIINQ 2179
            R+ VLVF DDIL+YS+ +  H +HL TV QIL KHQL  K +KCSF Q  + YLGHII  
Sbjct: 825  RRCVLVFVDDILIYSKSLEEHVQHLKTVFQILLKHQLKVKRTKCSFAQQELAYLGHIIQP 884

Query: 2178 QGVSADPRKIEAMQIWPTPVNLKQLRGFLGLTGYYRKFMKGYGXXXXXXXXXXXXD-IFI 2002
             GVS DP KI+ +Q WP P ++K+LR FLGL+GYYRKF++ YG              ++I
Sbjct: 885  NGVSTDPEKIQVIQHWPAPTSVKELRSFLGLSGYYRKFVRNYGILSKPLTNLLRKGQLYI 944

Query: 2001 WTETTEAAFNKLKMAMSTTPVLALPDFSQPFVIETDASYGGIGAVLMQKKRPLSYISKSM 1822
            WT  TE AF  LK A+ T  VLA+PDF  PFV+ETDAS  GIGAVLMQ   PL+++S+++
Sbjct: 945  WTAETEDAFQALKQALITALVLAMPDFQTPFVVETDASDKGIGAVLMQNNHPLAFLSRAL 1004

Query: 1821 GPRNLGMSIYEKELFALVTAVVKWRHYLEGHHFV--TDHQSLKYLLEQRITTPLQQKWLT 1648
            G R+ G+S YEKE  A++ AV  WR YL+   F   TDH+SL +L EQR+TTP Q K LT
Sbjct: 1005 GLRHPGLSTYEKESLAIMLAVDHWRPYLQHDEFFIRTDHRSLAFLTEQRLTTPWQHKALT 1064

Query: 1647 KLMGLDYEIQYRKGVENVVADALSR---REEGECSALTQLTPTWVQEVMNSYEGDDTATE 1477
            KL+GL Y+I ++KG++N  ADALSR    +  E SAL+   P W+ +++  Y  D  A  
Sbjct: 1065 KLLGLRYKIIFKKGIDNSAADALSRYPGSDRVELSALSVAVPEWINDIVAGYSSDPDACS 1124

Query: 1476 KIQSLVMDPTSDQSYQYCNGVLRYKGKLYIGSGGDIRRKMIQCIHSSQEGGHSEVQASIM 1297
            K+Q+L ++  +  ++   NGVL ++ +L++G   D++++++  +H++  GGHS +Q +  
Sbjct: 1125 KVQTLCINSGAVPNFSLRNGVLYFQNRLWVGHNVDVQQRILANLHTAAVGGHSGIQVTYQ 1184

Query: 1296 RAKQHIFWPGMSMDIKMEVLQCDICQRCKGEHTPYPGLLHPLPIPQHPWSHISLDFIEGL 1117
            R KQ   WP +   +   V  C +CQ+ K EH  YPG+L PLP+P H W  +SLDF+EGL
Sbjct: 1185 RVKQLFAWPRLRATVVQYVQACSVCQQAKSEHVKYPGMLQPLPVPDHAWQIVSLDFVEGL 1244

Query: 1116 PKSEGKDVIMVVVDRFTKYGHFITLAHPFTAKRAAQLFLDNISRLHGLPQSIISDRDKIF 937
            PKS   + I+VVVD+F+KY HF+ L HPF+A   A+ ++ +I RLHGLPQS+ISDRD+IF
Sbjct: 1245 PKSASFNCILVVVDKFSKYSHFVPLTHPFSALDVAEAYMQHIHRLHGLPQSLISDRDRIF 1304

Query: 936  TSSFWQELFKLLRTKLQLSTAYHPQSDGQTERLNQCLEMYLRCMTHDKPKAWAKWIPLAE 757
            TS+ W  LF+L  T+L++S++YHPQ+DGQTER+NQCLE +LRC  H  P  W++W+ LAE
Sbjct: 1305 TSTLWTTLFRLAGTQLRMSSSYHPQTDGQTERVNQCLETFLRCFVHACPSQWSRWLALAE 1364

Query: 756  WWYNTTYHTAIQRTPFEALYGTSPPQLALGPYHQTNLAAVEDLLQKRHKMNRQLKESLAQ 577
            +WYNT++H+A+  TPFE LYG  P    L          + + L +R KM   +++ L +
Sbjct: 1365 YWYNTSFHSALGTTPFEVLYGHKPRYFGLSASAACRSDDLVEWLHEREKMQALIRDHLLR 1424

Query: 576  ASARMK 559
            A  RMK
Sbjct: 1425 AQTRMK 1430



 Score =  102 bits (254), Expect(2) = 0.0
 Identities = 56/139 (40%), Positives = 80/139 (57%), Gaps = 2/139 (1%)
 Frame = -3

Query: 551  VYLKLHPYQPQTVVRGENHKLSPKYYGPFKVETRIGEVAYRLKLPARAKIHPTFHVSLLK 372
            VYLKL P+  Q+VV   N KLS ++YGPF+V  ++G VAYRL LP+ + IHP  HVS LK
Sbjct: 1448 VYLKLQPFVQQSVVTRANRKLSFRFYGPFQVLDKVGTVAYRLDLPSSSLIHPVVHVSQLK 1507

Query: 371  KKIGDKAVCVTELP--SGTNAQYLDKKPLKILQARMFIKGERAGAKWLIQWTDQLEDEAT 198
            K +       + LP    TNA ++   P +IL  R   KG +   +  ++WT       T
Sbjct: 1508 KALAPTEQVHSPLPVLDPTNATHV--CPAQILDRRFIRKGSKLVEQIQVRWTGDAPAATT 1565

Query: 197  WEDSEGNQQQYPTFKPWGQ 141
            WE+ +  ++++PT   WGQ
Sbjct: 1566 WENPQELRRRFPTAPAWGQ 1584


>emb|CAJ00278.1| hypothetical protein [Lotus japonicus]
          Length = 1508

 Score =  600 bits (1548), Expect(2) = 0.0
 Identities = 305/609 (50%), Positives = 399/609 (65%), Gaps = 9/609 (1%)
 Frame = -2

Query: 2358 RKYVLVFFDDILVYSEDMLSHTEHLGTVLQILRKHQLYAKLSKCSFGQTRVEYLGHIINQ 2179
            RK VL+FFDDILVYS  + +H +HL  V  +LRKH  Y K SKC+F    +EYLGH I+ 
Sbjct: 743  RKSVLIFFDDILVYSATVEAHLQHLREVFAVLRKHSFYVKRSKCAFFTPVIEYLGHFISA 802

Query: 2178 QGVSADPRKIEAMQIWPTPVNLKQLRGFLGLTGYYRKFMKGYGXXXXXXXXXXXXDIFIW 1999
             GVS D  KI+A+Q WP PV +KQLRGFLGLTGYYR+F+KGY             D F W
Sbjct: 803  SGVSTDSTKIKAIQDWPEPVTIKQLRGFLGLTGYYRRFIKGYSILASPLTDLLRKDGFHW 862

Query: 1998 TETTEAAFNKLKMAMSTTPVLALPDFSQPFVIETDASYGGIGAVLMQKKRPLSYISKSMG 1819
            +    AAF +LK A+   PVLA+PD  +PF +ETDAS  GIGAVL+Q K P+++ISK + 
Sbjct: 863  SAAASAAFLQLKNALVQAPVLAIPDLQKPFTVETDASSTGIGAVLLQDKHPVAFISKVLS 922

Query: 1818 PRNLGMSIYEKELFALVTAVVKWRHYLEGHHF--VTDHQSLKYLLEQRITTPLQQKWLTK 1645
            PRN  +S+Y++EL ALV AV KW  YL    F  +TD QSLK+LLEQR++TP Q +W+TK
Sbjct: 923  PRNRLLSVYDRELLALVHAVTKWHQYLAIQQFTILTDQQSLKFLLEQRLSTPAQYRWVTK 982

Query: 1644 LMGLDYEIQYRKGVENVVADALSRREEGECSALTQLTPTWVQEVM-----NSYEGDDTAT 1480
            LMGL Y IQY++G ENVVADALSR   GE   L QL+ + V   +      +Y  D+   
Sbjct: 983  LMGLSYVIQYKRGKENVVADALSRASHGE---LFQLSVSSVSSELWGLLTQAYAADEALQ 1039

Query: 1479 EKIQSLVMDPTSDQSYQYCNGVLRYKGKLYIGSGGDIRRKMIQCIHSSQEGGHSEVQASI 1300
            + I  ++  P     Y   +G L  K +L I +   +R  +++ +HSS +GGHS ++A++
Sbjct: 1040 QLISQVLAQPQLHAHYSVVDGFLFRKHRLMIPNNSQVRTLILEWLHSSHQGGHSGIRATV 1099

Query: 1299 MRAKQHIFWPGMSMDIKMEVLQCDICQRCKGEHTPYPGLLHPLPIPQHPWSHISLDFIEG 1120
            +R K   FW G+S D+   + +C+ C RCK E    PGLL PLPIP   W  I++DFI+ 
Sbjct: 1100 VRIKSLFFWKGLSKDVADFIQKCETCLRCKYERVASPGLLQPLPIPAGVWQSIAMDFIDK 1159

Query: 1119 LPKSEGKDVIMVVVDRFTKYGHFITLAHPFTAKRAAQLFLDNISRLHGLPQSIISDRDKI 940
            LPKS GKD I VV+DR +KY HFI L HP+TA   A++F+  + RLHG P +I+SDRD +
Sbjct: 1160 LPKSHGKDAIWVVIDRLSKYAHFIPLTHPYTASTLAEIFIKEVYRLHGAPSNIVSDRDPL 1219

Query: 939  FTSSFWQELFKLLRTKLQLSTAYHPQSDGQTERLNQCLEMYLRCMTHDKPKAWAKWIPLA 760
            FTS+FW    + L     L+TAYHPQSDGQ+E LN+CLE YLR MT  +PK W  W+PLA
Sbjct: 1220 FTSTFWTAFLQQLGISQSLTTAYHPQSDGQSEVLNRCLEHYLRAMTWQRPKEWVTWLPLA 1279

Query: 759  EWWYNTTYHTAIQRTPFEALYGTSPPQLALGPY--HQTNLAAVEDLLQKRHKMNRQLKES 586
            EWWYNTTYH+AIQ TP+E +YG  PP + L PY    T + AV+     R +M ++L  +
Sbjct: 1280 EWWYNTTYHSAIQTTPYEVVYG-QPPAIHL-PYCPQSTIVDAVDRSFTAREQMIQKLHAN 1337

Query: 585  LAQASARMK 559
            L +A ARMK
Sbjct: 1338 LMRAQARMK 1346



 Score =  105 bits (262), Expect(2) = 0.0
 Identities = 57/132 (43%), Positives = 79/132 (59%)
 Frame = -3

Query: 551  VYLKLHPYQPQTVVRGENHKLSPKYYGPFKVETRIGEVAYRLKLPARAKIHPTFHVSLLK 372
            V LKL PY+  +     + KLSP+++GP++V  R+G+VAY L LP  +KIHPTFHVSLL 
Sbjct: 1364 VLLKLQPYRQSSTQHRASEKLSPRFFGPYQVLHRVGKVAYTLALPPESKIHPTFHVSLL- 1422

Query: 371  KKIGDKAVCVTELPSGTNAQYLDKKPLKILQARMFIKGERAGAKWLIQWTDQLEDEATWE 192
            K     A+    LP         K P KIL+ RM  +  +A  + L+QW  ++E+EATWE
Sbjct: 1423 KPCPSPAMPHVPLPLEWGNLDQPKAPFKILKRRMVQRRHKAVTEVLVQWLGEMEEEATWE 1482

Query: 191  DSEGNQQQYPTF 156
                 + +YPTF
Sbjct: 1483 VLYNLKLKYPTF 1494


>emb|CAJ00277.1| hypothetical protein [Lotus japonicus]
          Length = 1508

 Score =  600 bits (1548), Expect(2) = 0.0
 Identities = 304/609 (49%), Positives = 399/609 (65%), Gaps = 9/609 (1%)
 Frame = -2

Query: 2358 RKYVLVFFDDILVYSEDMLSHTEHLGTVLQILRKHQLYAKLSKCSFGQTRVEYLGHIINQ 2179
            RK VL+FFDDILVYS  + +H +HL  V  +LRKH  Y K SKC+F    +EYLGH I+ 
Sbjct: 743  RKSVLIFFDDILVYSATVEAHLQHLREVFAVLRKHSFYVKRSKCAFFTPVIEYLGHFISA 802

Query: 2178 QGVSADPRKIEAMQIWPTPVNLKQLRGFLGLTGYYRKFMKGYGXXXXXXXXXXXXDIFIW 1999
             GVS D  KI+A+Q WP PV +KQLRGFLGLTGYYR+F+KGY             D F W
Sbjct: 803  SGVSTDSTKIKAIQDWPEPVTIKQLRGFLGLTGYYRRFIKGYSILASPLTDLLRKDGFHW 862

Query: 1998 TETTEAAFNKLKMAMSTTPVLALPDFSQPFVIETDASYGGIGAVLMQKKRPLSYISKSMG 1819
            +    AAF +LK A+   PVLA+PD  +PF +ETDAS  GIGAVL+Q K P+++ISK + 
Sbjct: 863  SAAASAAFLQLKNALVQAPVLAIPDLQKPFTVETDASSTGIGAVLLQDKHPVAFISKVLS 922

Query: 1818 PRNLGMSIYEKELFALVTAVVKWRHYLEGHHF--VTDHQSLKYLLEQRITTPLQQKWLTK 1645
            PRN  +S+Y++EL ALV AV KW  YL    F  +TD QSLK+LLEQR++TP Q +W+TK
Sbjct: 923  PRNRLLSVYDRELLALVHAVTKWHQYLAIQQFTILTDQQSLKFLLEQRLSTPAQYRWVTK 982

Query: 1644 LMGLDYEIQYRKGVENVVADALSRREEGECSALTQLTPTWVQEVMN-----SYEGDDTAT 1480
            LMGL Y IQY++G ENVVADALSR   GE   L QL+ + +   +      +Y  D+   
Sbjct: 983  LMGLSYVIQYKRGKENVVADALSRASHGE---LFQLSVSSISSELGGLLTQAYAADEALQ 1039

Query: 1479 EKIQSLVMDPTSDQSYQYCNGVLRYKGKLYIGSGGDIRRKMIQCIHSSQEGGHSEVQASI 1300
            + I  ++  P     Y   +G L  K +L I +   +R  +++ +HSS +GGHS ++A++
Sbjct: 1040 QLISQVLAQPQLHAHYSVVDGFLFRKHRLMIPNNSQVRTLILEWLHSSHQGGHSGIRATV 1099

Query: 1299 MRAKQHIFWPGMSMDIKMEVLQCDICQRCKGEHTPYPGLLHPLPIPQHPWSHISLDFIEG 1120
            +R K   FW G+S D+   + +C+ C RCK E    PGLL PLPIP   W  I++DFI+ 
Sbjct: 1100 VRIKSLFFWKGLSKDVADFIQKCETCLRCKYERVASPGLLQPLPIPAGVWQSIAMDFIDK 1159

Query: 1119 LPKSEGKDVIMVVVDRFTKYGHFITLAHPFTAKRAAQLFLDNISRLHGLPQSIISDRDKI 940
            LPKS GKD I VV+DR +KY HFI L HP+TA   A++F+  + RLHG P +I+SDRD +
Sbjct: 1160 LPKSHGKDAIWVVIDRLSKYAHFIPLTHPYTASTLAEIFIKEVYRLHGAPSNIVSDRDPL 1219

Query: 939  FTSSFWQELFKLLRTKLQLSTAYHPQSDGQTERLNQCLEMYLRCMTHDKPKAWAKWIPLA 760
            FTS+FW    + L     L+TAYHPQSDGQ+E LN+CLE YLR MT  +PK W  W+PLA
Sbjct: 1220 FTSTFWTAFLQQLGISQSLTTAYHPQSDGQSEVLNRCLEHYLRAMTWQRPKEWVTWLPLA 1279

Query: 759  EWWYNTTYHTAIQRTPFEALYGTSPPQLALGPY--HQTNLAAVEDLLQKRHKMNRQLKES 586
            EWWYNTTYH+AIQ TP+E +YG  PP + L PY    T + AV+     R +M ++L  +
Sbjct: 1280 EWWYNTTYHSAIQTTPYEVVYG-QPPAIHL-PYCPQSTIVEAVDRSFTAREQMIQKLHAN 1337

Query: 585  LAQASARMK 559
            L +A ARMK
Sbjct: 1338 LMRAQARMK 1346



 Score =  105 bits (262), Expect(2) = 0.0
 Identities = 57/132 (43%), Positives = 79/132 (59%)
 Frame = -3

Query: 551  VYLKLHPYQPQTVVRGENHKLSPKYYGPFKVETRIGEVAYRLKLPARAKIHPTFHVSLLK 372
            V LKL PY+  +     + KLSP+++GP++V  R+G+VAY L LP  +KIHPTFHVSLL 
Sbjct: 1364 VLLKLQPYRQSSTQHRASEKLSPRFFGPYQVLHRVGKVAYTLALPPESKIHPTFHVSLL- 1422

Query: 371  KKIGDKAVCVTELPSGTNAQYLDKKPLKILQARMFIKGERAGAKWLIQWTDQLEDEATWE 192
            K     A+    LP         K P KIL+ RM  +  +A  + L+QW  ++E+EATWE
Sbjct: 1423 KPCPSPAMPHVPLPLEWGNLDQPKAPFKILKRRMVQRRHKAVTEVLVQWLGEMEEEATWE 1482

Query: 191  DSEGNQQQYPTF 156
                 + +YPTF
Sbjct: 1483 VLYNLKLKYPTF 1494