BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Forsythia22_contig00015739
         (816 letters)

Database: ./nr 
           69,698,275 sequences; 24,982,196,650 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_011075687.1| PREDICTED: probable RNA-dependent RNA polyme...   185   3e-84
emb|CDP05596.1| unnamed protein product [Coffea canephora]            184   5e-82
ref|XP_012847562.1| PREDICTED: probable RNA-dependent RNA polyme...   171   9e-82
gb|AAT38751.2| RNA-directed RNA polymerase, putative [Solanum de...   171   3e-80
gb|AAT38687.2| RNA-directed RNA polymerase, putative [Solanum de...   171   4e-80
ref|NP_001234319.1| RNA-directed RNA polymerase [Solanum lycoper...   172   4e-80
ref|XP_002284914.1| PREDICTED: probable RNA-dependent RNA polyme...   176   2e-79
emb|CBI26820.3| unnamed protein product [Vitis vinifera]              176   2e-79
emb|CAN82339.1| hypothetical protein VITISV_039922 [Vitis vinifera]   176   2e-79
ref|XP_011024314.1| PREDICTED: RNA-dependent RNA polymerase 1-li...   176   3e-79
ref|XP_011024307.1| PREDICTED: RNA-dependent RNA polymerase 1-li...   176   3e-79
gb|ABO92977.1| putative RNA-dependent RNA-polymerase [Solanum tu...   167   5e-79
gb|AAT38699.2| RNA dependent RNA polymerase family protein [Sola...   167   5e-79
emb|CDP20205.1| unnamed protein product [Coffea canephora]            179   5e-78
ref|XP_006366108.1| PREDICTED: RNA-dependent RNA polymerase 1-li...   164   6e-78
ref|XP_002311536.1| RNA-directed RNA Polymerase family protein [...   175   8e-78
ref|XP_008220919.1| PREDICTED: probable RNA-dependent RNA polyme...   167   8e-78
ref|XP_008381760.1| PREDICTED: probable RNA-dependent RNA polyme...   163   8e-78
gb|ABQ45352.1| RNA-dependent RNA polymerase [Gossypium hirsutum]      168   1e-77
gb|KHG26498.1| RNA-dependent RNA polymerase 1 -like protein [Gos...   167   1e-77

>ref|XP_011075687.1| PREDICTED: probable RNA-dependent RNA polymerase 1 [Sesamum indicum]
            gi|747058682|ref|XP_011075688.1| PREDICTED: probable
            RNA-dependent RNA polymerase 1 [Sesamum indicum]
            gi|747058684|ref|XP_011075689.1| PREDICTED: probable
            RNA-dependent RNA polymerase 1 [Sesamum indicum]
          Length = 1115

 Score =  185 bits (469), Expect(2) = 3e-84
 Identities = 88/109 (80%), Positives = 97/109 (88%)
 Frame = +1

Query: 1    EPCIELAKLFSIAVDFPKTGVPAEIPSQLRVKEYPDFMGKPDKTTYESRCVIGKLFRDVK 180
            E C+ELA+LFSIAVDFPKTGVPAEIPS LRVKEYPDFM KPDKT YES+ VIGKL+R+VK
Sbjct: 880  ESCLELARLFSIAVDFPKTGVPAEIPSHLRVKEYPDFMDKPDKTAYESKRVIGKLYREVK 939

Query: 181  NIAPHAAPIKSFTREVASKSYDHDMEVDGFEDYIDEAFHYKTEYDYKLG 327
            +IAPH    KSFT+EVA +SYD DMEVDGF+DYIDEAF YKTEYDYKLG
Sbjct: 940  DIAPHTTSSKSFTKEVARRSYDPDMEVDGFKDYIDEAFDYKTEYDYKLG 988



 Score =  155 bits (392), Expect(2) = 3e-84
 Identities = 77/120 (64%), Positives = 88/120 (73%)
 Frame = +2

Query: 302  KLSMITSWVXIKTEAEILSGGIMKMSKTFXXXXXXXXXXXXXXSLRSEARKAFKKGSESD 481
            KL  +  +  IKTEAEILSGGIMK SKTF              SLR+EAR  FKKGSESD
Sbjct: 986  KLGNLMEYYGIKTEAEILSGGIMKTSKTFDRRKDAEAIGVAVRSLRNEARSWFKKGSESD 1045

Query: 482  DMFAKASAWYHVTYHPTYWGCYNEGLNRDHYISFPWCVYDKLVQIKKDKASLRRSLQMSS 661
            D +AKASAWYHVTYHP +WG YNEGL RDHYISFPWCVYDKL++IK+D +  RR+  +SS
Sbjct: 1046 DPYAKASAWYHVTYHPDFWGSYNEGLKRDHYISFPWCVYDKLIKIKEDNS--RRAPGISS 1103


>emb|CDP05596.1| unnamed protein product [Coffea canephora]
          Length = 1112

 Score =  184 bits (467), Expect(2) = 5e-82
 Identities = 88/109 (80%), Positives = 98/109 (89%)
 Frame = +1

Query: 1    EPCIELAKLFSIAVDFPKTGVPAEIPSQLRVKEYPDFMGKPDKTTYESRCVIGKLFRDVK 180
            +PC+ELA+LFSIAVDFPKTGVPAEI S LRVKEYPDFM K DKTTY+S+ VIGKLFR+VK
Sbjct: 876  KPCLELARLFSIAVDFPKTGVPAEITSHLRVKEYPDFMEKSDKTTYDSQHVIGKLFREVK 935

Query: 181  NIAPHAAPIKSFTREVASKSYDHDMEVDGFEDYIDEAFHYKTEYDYKLG 327
             IAPH + I+SFTREVA KSYD DMEVDGFEDY+DEAF YK+EYDYKLG
Sbjct: 936  EIAPHTSSIRSFTREVARKSYDIDMEVDGFEDYVDEAFDYKSEYDYKLG 984



 Score =  148 bits (374), Expect(2) = 5e-82
 Identities = 75/121 (61%), Positives = 85/121 (70%), Gaps = 1/121 (0%)
 Frame = +2

Query: 302  KLSMITSWVXIKTEAEILSGGIMKMSKTFXXXXXXXXXXXXXXSLRSEARKAFKK-GSES 478
            KL  +  +  IKTEAEILSGGIMKMS++F              SLR EAR  F + G  S
Sbjct: 982  KLGNLMDYYGIKTEAEILSGGIMKMSRSFDRRKDAEAVGMAVRSLRKEARTWFNRNGGHS 1041

Query: 479  DDMFAKASAWYHVTYHPTYWGCYNEGLNRDHYISFPWCVYDKLVQIKKDKASLRRSLQMS 658
            DD FAKASAWY+VTYHP YWGCYNEGLNR HYISFPWC+YD+L+QIK  KA  RR+ Q S
Sbjct: 1042 DDAFAKASAWYYVTYHPRYWGCYNEGLNRAHYISFPWCIYDRLIQIK--KARTRRAQQPS 1099

Query: 659  S 661
            S
Sbjct: 1100 S 1100


>ref|XP_012847562.1| PREDICTED: probable RNA-dependent RNA polymerase 1 [Erythranthe
            guttatus] gi|848895047|ref|XP_012847563.1| PREDICTED:
            probable RNA-dependent RNA polymerase 1 [Erythranthe
            guttatus] gi|604316686|gb|EYU28878.1| hypothetical
            protein MIMGU_mgv1a000505mg [Erythranthe guttata]
          Length = 1110

 Score =  171 bits (433), Expect(2) = 9e-82
 Identities = 82/109 (75%), Positives = 93/109 (85%)
 Frame = +1

Query: 1    EPCIELAKLFSIAVDFPKTGVPAEIPSQLRVKEYPDFMGKPDKTTYESRCVIGKLFRDVK 180
            EPC+ELA+LFSIAVDF KTG+PAEIP  LRVKEYPDFM KPDK  Y S  VIGKLFR+VK
Sbjct: 876  EPCLELARLFSIAVDFNKTGIPAEIPPHLRVKEYPDFMEKPDKINYASSRVIGKLFREVK 935

Query: 181  NIAPHAAPIKSFTREVASKSYDHDMEVDGFEDYIDEAFHYKTEYDYKLG 327
            +IAP  +  +SFT+EVA +SYD DMEVDGFED+IDEAF +KTEYDYKLG
Sbjct: 936  DIAPQTSSFRSFTKEVARRSYDPDMEVDGFEDHIDEAFLHKTEYDYKLG 984



 Score =  160 bits (406), Expect(2) = 9e-82
 Identities = 77/126 (61%), Positives = 94/126 (74%)
 Frame = +2

Query: 302  KLSMITSWVXIKTEAEILSGGIMKMSKTFXXXXXXXXXXXXXXSLRSEARKAFKKGSESD 481
            KL  +  +  +KTEAE+LSGGIMKMSKTF              SLR+EAR  FKKG+E+D
Sbjct: 982  KLGNLMEYYGVKTEAEVLSGGIMKMSKTFDRRKDAEAIGAAVRSLRNEARSWFKKGTEAD 1041

Query: 482  DMFAKASAWYHVTYHPTYWGCYNEGLNRDHYISFPWCVYDKLVQIKKDKASLRRSLQMSS 661
            D++AKASAWY+VTYHP Y+GCYNEG+ RDHY+SFPWCVYDKLV+IKKD +  RR+ QM+S
Sbjct: 1042 DVYAKASAWYYVTYHPDYFGCYNEGMKRDHYLSFPWCVYDKLVKIKKDNS--RRASQMAS 1099

Query: 662  HVRNLN 679
              R  N
Sbjct: 1100 LRRQFN 1105


>gb|AAT38751.2| RNA-directed RNA polymerase, putative [Solanum demissum]
          Length = 1180

 Score =  171 bits (434), Expect(2) = 3e-80
 Identities = 85/109 (77%), Positives = 93/109 (85%)
 Frame = +1

Query: 1    EPCIELAKLFSIAVDFPKTGVPAEIPSQLRVKEYPDFMGKPDKTTYESRCVIGKLFRDVK 180
            +PC +LA+LFSIAVDFPKTGVPAEIPSQLR KEYPDFM KPDKTTY S  VIGKLFR VK
Sbjct: 943  DPCKKLAELFSIAVDFPKTGVPAEIPSQLRPKEYPDFMDKPDKTTYISERVIGKLFRKVK 1002

Query: 181  NIAPHAAPIKSFTREVASKSYDHDMEVDGFEDYIDEAFHYKTEYDYKLG 327
            + AP A+ I  FTR+VA +SYD D+EVDGFEDYIDEAF YKTEYD KLG
Sbjct: 1003 DKAPQASSIAIFTRDVARRSYDADLEVDGFEDYIDEAFDYKTEYDNKLG 1051



 Score =  155 bits (392), Expect(2) = 3e-80
 Identities = 74/120 (61%), Positives = 86/120 (71%)
 Frame = +2

Query: 302  KLSMITSWVXIKTEAEILSGGIMKMSKTFXXXXXXXXXXXXXXSLRSEARKAFKKGSESD 481
            KL  +  +  IKTEAEILSGGIMK SKTF              +LR EAR  FK+ ++ D
Sbjct: 1049 KLGNLMDYYGIKTEAEILSGGIMKASKTFDRRKDAEAISVAVRALRKEARTWFKRRNDID 1108

Query: 482  DMFAKASAWYHVTYHPTYWGCYNEGLNRDHYISFPWCVYDKLVQIKKDKASLRRSLQMSS 661
            DM  KASAWYHVTYHPTYWGCYN+GL RDH+ISFPWCVYD+L+QIKK+KA  R  L +SS
Sbjct: 1109 DMLPKASAWYHVTYHPTYWGCYNQGLKRDHFISFPWCVYDQLIQIKKEKALNRPVLNLSS 1168


>gb|AAT38687.2| RNA-directed RNA polymerase, putative [Solanum demissum]
          Length = 1139

 Score =  171 bits (433), Expect(2) = 4e-80
 Identities = 85/109 (77%), Positives = 93/109 (85%)
 Frame = +1

Query: 1    EPCIELAKLFSIAVDFPKTGVPAEIPSQLRVKEYPDFMGKPDKTTYESRCVIGKLFRDVK 180
            +PC +LA+LFSIAVDFPKTGVPAEIPSQLR KEYPDFM KPDKTTY S  VIGKLFR VK
Sbjct: 902  DPCKKLAELFSIAVDFPKTGVPAEIPSQLRPKEYPDFMDKPDKTTYISERVIGKLFRKVK 961

Query: 181  NIAPHAAPIKSFTREVASKSYDHDMEVDGFEDYIDEAFHYKTEYDYKLG 327
            + AP A+ I  FTR+VA +SYD D+EVDGFEDYIDEAF YKTEYD KLG
Sbjct: 962  DKAPQASSIAIFTRDVARRSYDVDLEVDGFEDYIDEAFDYKTEYDNKLG 1010



 Score =  155 bits (392), Expect(2) = 4e-80
 Identities = 74/120 (61%), Positives = 86/120 (71%)
 Frame = +2

Query: 302  KLSMITSWVXIKTEAEILSGGIMKMSKTFXXXXXXXXXXXXXXSLRSEARKAFKKGSESD 481
            KL  +  +  IKTEAEILSGGIMK SKTF              +LR EAR  FK+ ++ D
Sbjct: 1008 KLGNLMDYYGIKTEAEILSGGIMKTSKTFDRRKDAEAISIAVRALRKEARTWFKRRNDID 1067

Query: 482  DMFAKASAWYHVTYHPTYWGCYNEGLNRDHYISFPWCVYDKLVQIKKDKASLRRSLQMSS 661
            DM  KASAWYHVTYHPTYWGCYN+GL RDH+ISFPWCVYD+L+QIKK+KA  R  L +SS
Sbjct: 1068 DMLPKASAWYHVTYHPTYWGCYNQGLKRDHFISFPWCVYDQLIQIKKEKALNRPVLNLSS 1127


>ref|NP_001234319.1| RNA-directed RNA polymerase [Solanum lycopersicum]
            gi|4038592|emb|CAA71421.1| RNA-directed RNA polymerase
            [Solanum lycopersicum]
          Length = 1114

 Score =  172 bits (436), Expect(2) = 4e-80
 Identities = 85/109 (77%), Positives = 94/109 (86%)
 Frame = +1

Query: 1    EPCIELAKLFSIAVDFPKTGVPAEIPSQLRVKEYPDFMGKPDKTTYESRCVIGKLFRDVK 180
            +PC +LA+LFSIAVDFPKTGVPAEIPSQLR KEYPDFM KPDKT+Y S  VIGKLFR VK
Sbjct: 877  DPCKKLAELFSIAVDFPKTGVPAEIPSQLRPKEYPDFMDKPDKTSYISERVIGKLFRKVK 936

Query: 181  NIAPHAAPIKSFTREVASKSYDHDMEVDGFEDYIDEAFHYKTEYDYKLG 327
            + AP A+ I +FTR+VA +SYD DMEVDGFEDYIDEAF YKTEYD KLG
Sbjct: 937  DKAPQASSIATFTRDVARRSYDADMEVDGFEDYIDEAFDYKTEYDNKLG 985



 Score =  154 bits (389), Expect(2) = 4e-80
 Identities = 74/120 (61%), Positives = 85/120 (70%)
 Frame = +2

Query: 302  KLSMITSWVXIKTEAEILSGGIMKMSKTFXXXXXXXXXXXXXXSLRSEARKAFKKGSESD 481
            KL  +  +  IKTEAEILSGGIMK SKTF              +LR EAR  FK+ ++ D
Sbjct: 983  KLGNLMDYYGIKTEAEILSGGIMKASKTFDRRKDAEAISVAVRALRKEARAWFKRRNDID 1042

Query: 482  DMFAKASAWYHVTYHPTYWGCYNEGLNRDHYISFPWCVYDKLVQIKKDKASLRRSLQMSS 661
            DM  KASAWYHVTYHPTYWGCYN+GL R H+ISFPWCVYD+L+QIKKDKA  R  L +SS
Sbjct: 1043 DMLPKASAWYHVTYHPTYWGCYNQGLKRAHFISFPWCVYDQLIQIKKDKARNRPVLNLSS 1102


>ref|XP_002284914.1| PREDICTED: probable RNA-dependent RNA polymerase 1 [Vitis vinifera]
          Length = 1121

 Score =  176 bits (446), Expect(2) = 2e-79
 Identities = 84/109 (77%), Positives = 95/109 (87%)
 Frame = +1

Query: 1    EPCIELAKLFSIAVDFPKTGVPAEIPSQLRVKEYPDFMGKPDKTTYESRCVIGKLFRDVK 180
            +PC ELAKLFSIAVDFPKTGVPAEIP  LRVKEYPDFM K DK TYES+ VIGKLFR+VK
Sbjct: 880  DPCTELAKLFSIAVDFPKTGVPAEIPRNLRVKEYPDFMEKADKPTYESQSVIGKLFREVK 939

Query: 181  NIAPHAAPIKSFTREVASKSYDHDMEVDGFEDYIDEAFHYKTEYDYKLG 327
            +IAPH   I+SFTR+VA +SYD DMEV GFEDY+ +AF+YK+EYDYKLG
Sbjct: 940  DIAPHNCNIRSFTRDVARQSYDPDMEVVGFEDYVSDAFYYKSEYDYKLG 988



 Score =  148 bits (373), Expect(2) = 2e-79
 Identities = 75/136 (55%), Positives = 91/136 (66%), Gaps = 5/136 (3%)
 Frame = +2

Query: 302  KLSMITSWVXIKTEAEILSGGIMKMSKTFXXXXXXXXXXXXXXSLRSEARKAFKK----- 466
            KL  +  +  IKTE+EILSG IM+MSK+F              SLR EAR  F K     
Sbjct: 986  KLGNLMDYYGIKTESEILSGSIMRMSKSFDRRKDAEAIGLAVKSLRKEARTWFNKMGSET 1045

Query: 467  GSESDDMFAKASAWYHVTYHPTYWGCYNEGLNRDHYISFPWCVYDKLVQIKKDKASLRRS 646
             SE+DD++AKASAWYHVTYHP YWGCYNEG++RDH++SFPWCVYDKL+  K+ K S  RS
Sbjct: 1046 DSEADDVYAKASAWYHVTYHPDYWGCYNEGMDRDHFLSFPWCVYDKLIHTKRKKMS-GRS 1104

Query: 647  LQMSSHVRNLNLGFSL 694
            L +SS  R L+ G  L
Sbjct: 1105 LHLSSLERRLSQGLRL 1120


>emb|CBI26820.3| unnamed protein product [Vitis vinifera]
          Length = 919

 Score =  176 bits (446), Expect(2) = 2e-79
 Identities = 84/109 (77%), Positives = 95/109 (87%)
 Frame = +1

Query: 1    EPCIELAKLFSIAVDFPKTGVPAEIPSQLRVKEYPDFMGKPDKTTYESRCVIGKLFRDVK 180
            +PC ELAKLFSIAVDFPKTGVPAEIP  LRVKEYPDFM K DK TYES+ VIGKLFR+VK
Sbjct: 678  DPCTELAKLFSIAVDFPKTGVPAEIPRNLRVKEYPDFMEKADKPTYESQSVIGKLFREVK 737

Query: 181  NIAPHAAPIKSFTREVASKSYDHDMEVDGFEDYIDEAFHYKTEYDYKLG 327
            +IAPH   I+SFTR+VA +SYD DMEV GFEDY+ +AF+YK+EYDYKLG
Sbjct: 738  DIAPHNCNIRSFTRDVARQSYDPDMEVVGFEDYVSDAFYYKSEYDYKLG 786



 Score =  148 bits (373), Expect(2) = 2e-79
 Identities = 75/136 (55%), Positives = 91/136 (66%), Gaps = 5/136 (3%)
 Frame = +2

Query: 302  KLSMITSWVXIKTEAEILSGGIMKMSKTFXXXXXXXXXXXXXXSLRSEARKAFKK----- 466
            KL  +  +  IKTE+EILSG IM+MSK+F              SLR EAR  F K     
Sbjct: 784  KLGNLMDYYGIKTESEILSGSIMRMSKSFDRRKDAEAIGLAVKSLRKEARTWFNKMGSET 843

Query: 467  GSESDDMFAKASAWYHVTYHPTYWGCYNEGLNRDHYISFPWCVYDKLVQIKKDKASLRRS 646
             SE+DD++AKASAWYHVTYHP YWGCYNEG++RDH++SFPWCVYDKL+  K+ K S  RS
Sbjct: 844  DSEADDVYAKASAWYHVTYHPDYWGCYNEGMDRDHFLSFPWCVYDKLIHTKRKKMS-GRS 902

Query: 647  LQMSSHVRNLNLGFSL 694
            L +SS  R L+ G  L
Sbjct: 903  LHLSSLERRLSQGLRL 918


>emb|CAN82339.1| hypothetical protein VITISV_039922 [Vitis vinifera]
          Length = 654

 Score =  176 bits (446), Expect(2) = 2e-79
 Identities = 84/109 (77%), Positives = 95/109 (87%)
 Frame = +1

Query: 1   EPCIELAKLFSIAVDFPKTGVPAEIPSQLRVKEYPDFMGKPDKTTYESRCVIGKLFRDVK 180
           +PC ELAKLFSIAVDFPKTGVPAEIP  LRVKEYPDFM K DK TYES+ VIGKLFR+VK
Sbjct: 413 DPCTELAKLFSIAVDFPKTGVPAEIPRNLRVKEYPDFMEKADKPTYESQSVIGKLFREVK 472

Query: 181 NIAPHAAPIKSFTREVASKSYDHDMEVDGFEDYIDEAFHYKTEYDYKLG 327
           +IAPH   I+SFTR+VA +SYD DMEV GFEDY+ +AF+YK+EYDYKLG
Sbjct: 473 DIAPHNCNIRSFTRDVARQSYDPDMEVVGFEDYVSDAFYYKSEYDYKLG 521



 Score =  148 bits (373), Expect(2) = 2e-79
 Identities = 75/136 (55%), Positives = 91/136 (66%), Gaps = 5/136 (3%)
 Frame = +2

Query: 302 KLSMITSWVXIKTEAEILSGGIMKMSKTFXXXXXXXXXXXXXXSLRSEARKAFKK----- 466
           KL  +  +  IKTE+EILSG IM+MSK+F              SLR EAR  F K     
Sbjct: 519 KLGNLMDYYGIKTESEILSGSIMRMSKSFDRRKDAEAIGLAVKSLRKEARTWFNKMGSET 578

Query: 467 GSESDDMFAKASAWYHVTYHPTYWGCYNEGLNRDHYISFPWCVYDKLVQIKKDKASLRRS 646
            SE+DD++AKASAWYHVTYHP YWGCYNEG++RDH++SFPWCVYDKL+  K+ K S  RS
Sbjct: 579 DSEADDVYAKASAWYHVTYHPDYWGCYNEGMDRDHFLSFPWCVYDKLIHTKRKKMS-GRS 637

Query: 647 LQMSSHVRNLNLGFSL 694
           L +SS  R L+ G  L
Sbjct: 638 LHLSSLERRLSQGLRL 653


>ref|XP_011024314.1| PREDICTED: RNA-dependent RNA polymerase 1-like isoform X2 [Populus
            euphratica]
          Length = 1132

 Score =  176 bits (447), Expect(2) = 3e-79
 Identities = 83/109 (76%), Positives = 96/109 (88%)
 Frame = +1

Query: 1    EPCIELAKLFSIAVDFPKTGVPAEIPSQLRVKEYPDFMGKPDKTTYESRCVIGKLFRDVK 180
            EPC+ELA+ FSIAVDFPKTGVPAEIPS LRV+EYPDFM KPDK +YESR VIGKLFR+VK
Sbjct: 890  EPCLELARKFSIAVDFPKTGVPAEIPSNLRVREYPDFMEKPDKPSYESRNVIGKLFREVK 949

Query: 181  NIAPHAAPIKSFTREVASKSYDHDMEVDGFEDYIDEAFHYKTEYDYKLG 327
            +IAP  + I+SFT +VA + YD DMEVDGFEDYID+AF+YK+ YDYKLG
Sbjct: 950  DIAPRTSSIRSFTSDVARQCYDPDMEVDGFEDYIDDAFYYKSNYDYKLG 998



 Score =  147 bits (370), Expect(2) = 3e-79
 Identities = 74/137 (54%), Positives = 92/137 (67%), Gaps = 5/137 (3%)
 Frame = +2

Query: 302  KLSMITSWVXIKTEAEILSGGIMKMSKTFXXXXXXXXXXXXXXSLRSEARKAF-KKGS-- 472
            KL  +  +  IKTEAE+LSG  MKMSK+F              SLR EAR  F +KGS  
Sbjct: 996  KLGNLMEYYGIKTEAELLSGSFMKMSKSFTKKRDAEAIGMAVRSLRKEARSWFNEKGSGL 1055

Query: 473  --ESDDMFAKASAWYHVTYHPTYWGCYNEGLNRDHYISFPWCVYDKLVQIKKDKASLRRS 646
              ++DD+ AKASAWYHVTYH  YWGCYNEG+NRDH++SFPWC+YDKL+QIKK+ A +RRS
Sbjct: 1056 DSQADDVDAKASAWYHVTYHHNYWGCYNEGMNRDHFLSFPWCLYDKLIQIKKNSARIRRS 1115

Query: 647  LQMSSHVRNLNLGFSLT 697
              + S  R  + G  L+
Sbjct: 1116 RILHSVERQFSRGLHLS 1132


>ref|XP_011024307.1| PREDICTED: RNA-dependent RNA polymerase 1-like isoform X1 [Populus
            euphratica]
          Length = 1132

 Score =  176 bits (447), Expect(2) = 3e-79
 Identities = 83/109 (76%), Positives = 96/109 (88%)
 Frame = +1

Query: 1    EPCIELAKLFSIAVDFPKTGVPAEIPSQLRVKEYPDFMGKPDKTTYESRCVIGKLFRDVK 180
            EPC+ELA+ FSIAVDFPKTGVPAEIPS LRV+EYPDFM KPDK +YESR VIGKLFR+VK
Sbjct: 890  EPCLELARKFSIAVDFPKTGVPAEIPSNLRVREYPDFMEKPDKPSYESRNVIGKLFREVK 949

Query: 181  NIAPHAAPIKSFTREVASKSYDHDMEVDGFEDYIDEAFHYKTEYDYKLG 327
            +IAP  + I+SFT +VA + YD DMEVDGFEDYID+AF+YK+ YDYKLG
Sbjct: 950  DIAPRTSSIRSFTSDVARQCYDPDMEVDGFEDYIDDAFYYKSNYDYKLG 998



 Score =  147 bits (370), Expect(2) = 3e-79
 Identities = 74/137 (54%), Positives = 92/137 (67%), Gaps = 5/137 (3%)
 Frame = +2

Query: 302  KLSMITSWVXIKTEAEILSGGIMKMSKTFXXXXXXXXXXXXXXSLRSEARKAF-KKGS-- 472
            KL  +  +  IKTEAE+LSG  MKMSK+F              SLR EAR  F +KGS  
Sbjct: 996  KLGNLMEYYGIKTEAELLSGSFMKMSKSFTKKRDAEAIGMAVRSLRKEARSWFNEKGSGL 1055

Query: 473  --ESDDMFAKASAWYHVTYHPTYWGCYNEGLNRDHYISFPWCVYDKLVQIKKDKASLRRS 646
              ++DD+ AKASAWYHVTYH  YWGCYNEG+NRDH++SFPWC+YDKL+QIKK+ A +RRS
Sbjct: 1056 DSQADDVDAKASAWYHVTYHHNYWGCYNEGMNRDHFLSFPWCLYDKLIQIKKNSARIRRS 1115

Query: 647  LQMSSHVRNLNLGFSLT 697
              + S  R  + G  L+
Sbjct: 1116 RILHSVERQFSRGLHLS 1132


>gb|ABO92977.1| putative RNA-dependent RNA-polymerase [Solanum tuberosum]
          Length = 1115

 Score =  167 bits (422), Expect(2) = 5e-79
 Identities = 85/110 (77%), Positives = 93/110 (84%), Gaps = 1/110 (0%)
 Frame = +1

Query: 1    EPCIELAKLFSIAVDFPKTGVPAEIPSQLRVKEYPDFMGKP-DKTTYESRCVIGKLFRDV 177
            +PC +LA+LFSIAVDFPKTGVPAEIPSQLR KEYPDFM KP DKTTY S  VIGKLFR V
Sbjct: 877  DPCKKLAELFSIAVDFPKTGVPAEIPSQLRPKEYPDFMDKPPDKTTYISERVIGKLFRKV 936

Query: 178  KNIAPHAAPIKSFTREVASKSYDHDMEVDGFEDYIDEAFHYKTEYDYKLG 327
            K+ AP A+ I  FTR+VA +SYD D+EVDGFEDYIDEAF YKTEYD KLG
Sbjct: 937  KDKAPQASSIAIFTRDVARRSYDADLEVDGFEDYIDEAFDYKTEYDNKLG 986



 Score =  155 bits (393), Expect(2) = 5e-79
 Identities = 74/120 (61%), Positives = 86/120 (71%)
 Frame = +2

Query: 302  KLSMITSWVXIKTEAEILSGGIMKMSKTFXXXXXXXXXXXXXXSLRSEARKAFKKGSESD 481
            KL  +  +  IKTEAEILSGGIMK SKTF              +LR EAR  FK+ ++ D
Sbjct: 984  KLGNLMDYYGIKTEAEILSGGIMKASKTFDRRKDAEAISVAVRALRKEARTWFKRRNDID 1043

Query: 482  DMFAKASAWYHVTYHPTYWGCYNEGLNRDHYISFPWCVYDKLVQIKKDKASLRRSLQMSS 661
            DM  KASAWYHVTYHPTYWGCYN+GL RDH+ISFPWCVYD+L+QIKK+KA  R  L +SS
Sbjct: 1044 DMLPKASAWYHVTYHPTYWGCYNQGLKRDHFISFPWCVYDQLIQIKKEKARNRPVLNLSS 1103


>gb|AAT38699.2| RNA dependent RNA polymerase family protein [Solanum demissum]
          Length = 963

 Score =  167 bits (422), Expect(2) = 5e-79
 Identities = 85/110 (77%), Positives = 93/110 (84%), Gaps = 1/110 (0%)
 Frame = +1

Query: 1    EPCIELAKLFSIAVDFPKTGVPAEIPSQLRVKEYPDFMGKP-DKTTYESRCVIGKLFRDV 177
            +PC +LA+LFSIAVDFPKTGVPAEIPSQLR KEYPDFM KP DKTTY S  VIGKLFR V
Sbjct: 725  DPCKKLAELFSIAVDFPKTGVPAEIPSQLRPKEYPDFMDKPPDKTTYISERVIGKLFRKV 784

Query: 178  KNIAPHAAPIKSFTREVASKSYDHDMEVDGFEDYIDEAFHYKTEYDYKLG 327
            K+ AP A+ I  FTR+VA +SYD D+EVDGFEDYIDEAF YKTEYD KLG
Sbjct: 785  KDKAPQASSIAIFTRDVARRSYDADLEVDGFEDYIDEAFDYKTEYDNKLG 834



 Score =  155 bits (393), Expect(2) = 5e-79
 Identities = 74/120 (61%), Positives = 86/120 (71%)
 Frame = +2

Query: 302  KLSMITSWVXIKTEAEILSGGIMKMSKTFXXXXXXXXXXXXXXSLRSEARKAFKKGSESD 481
            KL  +  +  IKTEAEILSGGIMK SKTF              +LR EAR  FK+ ++ D
Sbjct: 832  KLGNLMDYYGIKTEAEILSGGIMKASKTFDRRKDAEAISVAVRALRKEARTWFKRRNDID 891

Query: 482  DMFAKASAWYHVTYHPTYWGCYNEGLNRDHYISFPWCVYDKLVQIKKDKASLRRSLQMSS 661
            DM  KASAWYHVTYHPTYWGCYN+GL RDH+ISFPWCVYD+L+QIKK+KA  R  L +SS
Sbjct: 892  DMLPKASAWYHVTYHPTYWGCYNQGLKRDHFISFPWCVYDQLIQIKKEKARNRPVLNLSS 951


>emb|CDP20205.1| unnamed protein product [Coffea canephora]
          Length = 305

 Score =  179 bits (454), Expect(2) = 5e-78
 Identities = 86/109 (78%), Positives = 95/109 (87%)
 Frame = +1

Query: 1   EPCIELAKLFSIAVDFPKTGVPAEIPSQLRVKEYPDFMGKPDKTTYESRCVIGKLFRDVK 180
           EPC+ELA+LFSIAVDFPKT VPAEIPS L VKEYPD+M KPDK TYESR VIGKLFR+VK
Sbjct: 62  EPCLELAQLFSIAVDFPKTSVPAEIPSHLGVKEYPDYMEKPDKPTYESRHVIGKLFREVK 121

Query: 181 NIAPHAAPIKSFTREVASKSYDHDMEVDGFEDYIDEAFHYKTEYDYKLG 327
            IAPH + I+S TREVA K+YD DMEVDGFEDY+DEAF  K+EYDYKLG
Sbjct: 122 EIAPHTSSIRSLTREVARKAYDTDMEVDGFEDYVDEAFDCKSEYDYKLG 170



 Score =  140 bits (353), Expect(2) = 5e-78
 Identities = 78/136 (57%), Positives = 90/136 (66%), Gaps = 6/136 (4%)
 Frame = +2

Query: 302 KLSMITSWVXIKTEAEILSGGIMKMSKTFXXXXXXXXXXXXXXSLRSEARKAFKK-GSES 478
           KL ++  +  I+ EAEILSGGIMKMS++F              SLR EAR  F + G  S
Sbjct: 168 KLGILMDYYGIQNEAEILSGGIMKMSRSFDRRKDAEAVGMAVRSLRKEARTWFNRSGGHS 227

Query: 479 DDMFAKASAWYHVTYHPTYWGCY----NEGLNRDHYISFPWCVYDKLVQIKK-DKASLRR 643
           DD +AKASAWYHVTYH  +WGCY    NEGLNR H+ISFPWCVYDKL+QIKK  KAS R 
Sbjct: 228 DDPYAKASAWYHVTYHHRFWGCYWGVYNEGLNRAHFISFPWCVYDKLIQIKKAKKASTRS 287

Query: 644 SLQMSSHVRNLNLGFS 691
           S Q+SS    L L FS
Sbjct: 288 SQQISS----LELQFS 299


>ref|XP_006366108.1| PREDICTED: RNA-dependent RNA polymerase 1-like [Solanum tuberosum]
          Length = 1115

 Score =  164 bits (414), Expect(2) = 6e-78
 Identities = 83/110 (75%), Positives = 92/110 (83%), Gaps = 1/110 (0%)
 Frame = +1

Query: 1    EPCIELAKLFSIAVDFPKTGVPAEIPSQLRVKEYPDFMGKP-DKTTYESRCVIGKLFRDV 177
            +PC +LA+LFSIAVDFPKTGVPAEIPSQLR KEYPDFM KP DKTTY S  VIGKL+R V
Sbjct: 877  DPCKKLAELFSIAVDFPKTGVPAEIPSQLRPKEYPDFMDKPPDKTTYISERVIGKLYRKV 936

Query: 178  KNIAPHAAPIKSFTREVASKSYDHDMEVDGFEDYIDEAFHYKTEYDYKLG 327
            K+ AP A+    FTR+VA +SYD D+EVDGFEDYIDEAF YKTEYD KLG
Sbjct: 937  KDKAPQASSTAIFTRDVARRSYDADLEVDGFEDYIDEAFDYKTEYDNKLG 986



 Score =  155 bits (392), Expect(2) = 6e-78
 Identities = 74/120 (61%), Positives = 86/120 (71%)
 Frame = +2

Query: 302  KLSMITSWVXIKTEAEILSGGIMKMSKTFXXXXXXXXXXXXXXSLRSEARKAFKKGSESD 481
            KL  +  +  IKTEAEILSGGIMK SKTF              +LR EAR  FK+ ++ D
Sbjct: 984  KLGNLMDYYGIKTEAEILSGGIMKTSKTFDRRKDAEAISIAVRALRKEARTWFKRRNDID 1043

Query: 482  DMFAKASAWYHVTYHPTYWGCYNEGLNRDHYISFPWCVYDKLVQIKKDKASLRRSLQMSS 661
            DM  KASAWYHVTYHPTYWGCYN+GL RDH+ISFPWCVYD+L+QIKK+KA  R  L +SS
Sbjct: 1044 DMLPKASAWYHVTYHPTYWGCYNQGLKRDHFISFPWCVYDQLIQIKKEKALNRPVLNLSS 1103


>ref|XP_002311536.1| RNA-directed RNA Polymerase family protein [Populus trichocarpa]
            gi|222851356|gb|EEE88903.1| RNA-directed RNA Polymerase
            family protein [Populus trichocarpa]
          Length = 1133

 Score =  175 bits (444), Expect(2) = 8e-78
 Identities = 82/109 (75%), Positives = 95/109 (87%)
 Frame = +1

Query: 1    EPCIELAKLFSIAVDFPKTGVPAEIPSQLRVKEYPDFMGKPDKTTYESRCVIGKLFRDVK 180
            EPC+ELA+ FSIAVDFPKTGVPAEIPS LR +EYPDFM KPDK +YESR VIGKLFR+VK
Sbjct: 890  EPCVELARKFSIAVDFPKTGVPAEIPSNLRAREYPDFMEKPDKPSYESRNVIGKLFREVK 949

Query: 181  NIAPHAAPIKSFTREVASKSYDHDMEVDGFEDYIDEAFHYKTEYDYKLG 327
            +IAP  + I+SFT +VA + YD DMEVDGFEDYID+AF+YK+ YDYKLG
Sbjct: 950  DIAPRTSSIRSFTSDVARQCYDPDMEVDGFEDYIDDAFYYKSNYDYKLG 998



 Score =  143 bits (361), Expect(2) = 8e-78
 Identities = 74/138 (53%), Positives = 93/138 (67%), Gaps = 6/138 (4%)
 Frame = +2

Query: 302  KLSMITSWVXIKTEAEILSGGIMKMSKTFXXXXXXXXXXXXXXSLRSEARKAF-KKGS-- 472
            KL  +  +  IKTEAE+LSG  MKMSK+F              SL+ EAR  F +KGS  
Sbjct: 996  KLGNLMEYYGIKTEAELLSGSFMKMSKSFTKKRDAEAIGMAVRSLKKEARSWFNEKGSGL 1055

Query: 473  --ESDDMFAKASAWYHVTYHPTYWGCYNEGLNRDHYISFPWCVYDKLVQIK-KDKASLRR 643
              ++DD+ AKASAWYHVTYH  YWGCYNEG+NRDH++SFPWCVYDKL+QIK ++ A +RR
Sbjct: 1056 DSQADDVDAKASAWYHVTYHHNYWGCYNEGMNRDHFLSFPWCVYDKLIQIKRRNSARIRR 1115

Query: 644  SLQMSSHVRNLNLGFSLT 697
            SL + S  R  + G  L+
Sbjct: 1116 SLILPSVERQFSRGLHLS 1133


>ref|XP_008220919.1| PREDICTED: probable RNA-dependent RNA polymerase 1 [Prunus mume]
          Length = 1123

 Score =  167 bits (424), Expect(2) = 8e-78
 Identities = 79/109 (72%), Positives = 93/109 (85%)
 Frame = +1

Query: 1    EPCIELAKLFSIAVDFPKTGVPAEIPSQLRVKEYPDFMGKPDKTTYESRCVIGKLFRDVK 180
            +PCIELAKLFSIAVDFPKTGVPA IP  LRVKE+PDFM KPDK TY+S  VIG+LFR+VK
Sbjct: 881  KPCIELAKLFSIAVDFPKTGVPAIIPQHLRVKEFPDFMEKPDKPTYQSCNVIGELFREVK 940

Query: 181  NIAPHAAPIKSFTREVASKSYDHDMEVDGFEDYIDEAFHYKTEYDYKLG 327
            ++ PH   I+SF+REVA +SYDHDMEVDGFEDYI++A +YK+ YD  LG
Sbjct: 941  DVEPHGGSIRSFSREVARQSYDHDMEVDGFEDYIEDALYYKSNYDSILG 989



 Score =  151 bits (381), Expect(2) = 8e-78
 Identities = 74/124 (59%), Positives = 89/124 (71%), Gaps = 5/124 (4%)
 Frame = +2

Query: 305  LSMITSWVXIKTEAEILSGGIMKMSKTFXXXXXXXXXXXXXXSLRSEARKAFKK-----G 469
            L  +  +  IKTEAEILSG +MKMSK+F              SLR +AR  F +      
Sbjct: 988  LGNLLDYYGIKTEAEILSGSVMKMSKSFTKKRDMDPINMAVRSLRKDARTWFNEKATGLN 1047

Query: 470  SESDDMFAKASAWYHVTYHPTYWGCYNEGLNRDHYISFPWCVYDKLVQIKKDKASLRRSL 649
            S +DD++AKASAWYHVTYHP Y+GCYNEGLNRDH+ISFPWCVYDKLV IKK+KAS+RR+L
Sbjct: 1048 SGADDVYAKASAWYHVTYHPKYFGCYNEGLNRDHFISFPWCVYDKLVHIKKEKASVRRAL 1107

Query: 650  QMSS 661
             +SS
Sbjct: 1108 NLSS 1111


>ref|XP_008381760.1| PREDICTED: probable RNA-dependent RNA polymerase 1 [Malus domestica]
            gi|657979585|ref|XP_008381761.1| PREDICTED: probable
            RNA-dependent RNA polymerase 1 [Malus domestica]
          Length = 1114

 Score =  163 bits (412), Expect(2) = 8e-78
 Identities = 79/109 (72%), Positives = 92/109 (84%)
 Frame = +1

Query: 1    EPCIELAKLFSIAVDFPKTGVPAEIPSQLRVKEYPDFMGKPDKTTYESRCVIGKLFRDVK 180
            EPC ELAKLFSIAVDFPKTGVPA IP+ L VKE+PDFM K DK TY+S  VIG LF++VK
Sbjct: 872  EPCKELAKLFSIAVDFPKTGVPAVIPAHLYVKEFPDFMEKHDKPTYQSCNVIGALFQEVK 931

Query: 181  NIAPHAAPIKSFTREVASKSYDHDMEVDGFEDYIDEAFHYKTEYDYKLG 327
            +IAPH + I+SFTR+VA +SYD DMEVDGFEDYI++A +YK  YDYKLG
Sbjct: 932  DIAPHDSSIRSFTRQVAKQSYDPDMEVDGFEDYIEDAIYYKGNYDYKLG 980



 Score =  155 bits (393), Expect(2) = 8e-78
 Identities = 82/137 (59%), Positives = 95/137 (69%), Gaps = 5/137 (3%)
 Frame = +2

Query: 302  KLSMITSWVXIKTEAEILSGGIMKMSKTFXXXXXXXXXXXXXXSLRSEARKAF-KKG--- 469
            KL  +  +  IKTEAEILSG +M+MSK+F              SLR EAR  F +KG   
Sbjct: 978  KLGNLMDYYGIKTEAEILSGSVMRMSKSFTKRRDADSINMAVRSLRKEARAWFNEKGTGL 1037

Query: 470  -SESDDMFAKASAWYHVTYHPTYWGCYNEGLNRDHYISFPWCVYDKLVQIKKDKASLRRS 646
             S +DD++AKASAWYHVTYHP Y+G YNEGLNRDH+ISFPWCVYDKLV IKKDKAS+RRS
Sbjct: 1038 DSGADDVYAKASAWYHVTYHPDYFGTYNEGLNRDHFISFPWCVYDKLVVIKKDKASMRRS 1097

Query: 647  LQMSSHVRNLNLGFSLT 697
            L MSS  R    G  L+
Sbjct: 1098 LHMSSLERQFRSGLHLS 1114


>gb|ABQ45352.1| RNA-dependent RNA polymerase [Gossypium hirsutum]
          Length = 1110

 Score =  168 bits (425), Expect(2) = 1e-77
 Identities = 79/108 (73%), Positives = 92/108 (85%)
 Frame = +1

Query: 4    PCIELAKLFSIAVDFPKTGVPAEIPSQLRVKEYPDFMGKPDKTTYESRCVIGKLFRDVKN 183
            PC+ELAKLFSIAVDFPKTGVPAEIP +LRVKEYPDFM KPDK +Y+S  VIGKLFR+VKN
Sbjct: 869  PCLELAKLFSIAVDFPKTGVPAEIPQELRVKEYPDFMEKPDKPSYQSHNVIGKLFREVKN 928

Query: 184  IAPHAAPIKSFTREVASKSYDHDMEVDGFEDYIDEAFHYKTEYDYKLG 327
            +AP+   IK  TRE   + YD DMEV+GFEDYID+AF +K++YDYKLG
Sbjct: 929  LAPNECSIKFLTREKMQRFYDPDMEVEGFEDYIDDAFFHKSKYDYKLG 976



 Score =  150 bits (379), Expect(2) = 1e-77
 Identities = 75/136 (55%), Positives = 93/136 (68%), Gaps = 5/136 (3%)
 Frame = +2

Query: 302  KLSMITSWVXIKTEAEILSGGIMKMSKTFXXXXXXXXXXXXXXSLRSEARKAF-KKGSES 478
            KL  +  +  +KTEAEIL GGIMKMS++F              SLR EAR  F +KGSE 
Sbjct: 974  KLGNLMDYYGVKTEAEILGGGIMKMSRSFTKKRDAEAISMAVRSLRKEARSWFNEKGSEL 1033

Query: 479  D----DMFAKASAWYHVTYHPTYWGCYNEGLNRDHYISFPWCVYDKLVQIKKDKASLRRS 646
            D    D +AKASAWY+VTYHP+YWG YNEG+NRDH++SFPWCVYDKL+QIKK+KA++R +
Sbjct: 1034 DEEIDDAYAKASAWYYVTYHPSYWGQYNEGMNRDHFLSFPWCVYDKLIQIKKEKAAVREA 1093

Query: 647  LQMSSHVRNLNLGFSL 694
            L +SS       G  L
Sbjct: 1094 LDLSSLEHRFQRGLHL 1109


>gb|KHG26498.1| RNA-dependent RNA polymerase 1 -like protein [Gossypium arboreum]
            gi|728850182|gb|KHG29625.1| RNA-dependent RNA polymerase
            1 -like protein [Gossypium arboreum]
          Length = 1110

 Score =  167 bits (424), Expect(2) = 1e-77
 Identities = 79/108 (73%), Positives = 92/108 (85%)
 Frame = +1

Query: 4    PCIELAKLFSIAVDFPKTGVPAEIPSQLRVKEYPDFMGKPDKTTYESRCVIGKLFRDVKN 183
            PC+ELAKLFSIAVDFPKTGVPAEIP +LRVKE+PDFM KPDK +Y+S  VIGKLFR+VKN
Sbjct: 869  PCLELAKLFSIAVDFPKTGVPAEIPQELRVKEFPDFMEKPDKPSYQSYNVIGKLFREVKN 928

Query: 184  IAPHAAPIKSFTREVASKSYDHDMEVDGFEDYIDEAFHYKTEYDYKLG 327
            +AP+   IK  TRE   + YD DMEV+GFEDYID+AF YK++YDYKLG
Sbjct: 929  LAPNECSIKLLTREKMKRFYDPDMEVEGFEDYIDDAFFYKSKYDYKLG 976



 Score =  150 bits (380), Expect(2) = 1e-77
 Identities = 77/136 (56%), Positives = 94/136 (69%), Gaps = 5/136 (3%)
 Frame = +2

Query: 302  KLSMITSWVXIKTEAEILSGGIMKMSKTFXXXXXXXXXXXXXXSLRSEARKAF-KKGSES 478
            KL  +  +  +KTEAEILSGGIMKMS++F              SLR EAR  F +KGSE 
Sbjct: 974  KLGNLMDYYGVKTEAEILSGGIMKMSRSFTKKRDAEVISMAVRSLRKEARSWFNEKGSEL 1033

Query: 479  D----DMFAKASAWYHVTYHPTYWGCYNEGLNRDHYISFPWCVYDKLVQIKKDKASLRRS 646
            D    D +AKASAWY+VTYH +YWG YNEG+NRDH++SFPWCVYDKL+QIKK+KA+LR +
Sbjct: 1034 DEEIDDAYAKASAWYYVTYHHSYWGQYNEGMNRDHFLSFPWCVYDKLIQIKKEKAALREA 1093

Query: 647  LQMSSHVRNLNLGFSL 694
            L +SS       GF L
Sbjct: 1094 LDLSSLEHCFQRGFHL 1109