BLASTX nr result
ID: Forsythia22_contig00014898
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Forsythia22_contig00014898
(1321 letters)
Database: ./nr
69,698,275 sequences; 24,982,196,650 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
emb|CAN74984.1| hypothetical protein VITISV_035210 [Vitis vinifera] 145 9e-32
emb|CAN68842.1| hypothetical protein VITISV_023226 [Vitis vinifera] 141 1e-30
emb|CBI37296.3| unnamed protein product [Vitis vinifera] 130 2e-27
emb|CAN81156.1| hypothetical protein VITISV_016610 [Vitis vinifera] 130 3e-27
emb|CAN79845.1| hypothetical protein VITISV_027568 [Vitis vinifera] 126 4e-26
emb|CAN65188.1| hypothetical protein VITISV_004365 [Vitis vinifera] 126 4e-26
emb|CAB75932.1| putative protein [Arabidopsis thaliana] 119 7e-24
ref|XP_006579317.1| PREDICTED: uncharacterized protein LOC102667... 117 3e-23
ref|XP_008342460.1| PREDICTED: uncharacterized protein LOC103405... 111 1e-21
gb|KHN36591.1| Retrovirus-related Pol polyprotein from transposo... 110 3e-21
emb|CAN75114.1| hypothetical protein VITISV_001420 [Vitis vinifera] 105 8e-20
emb|CAN74283.1| hypothetical protein VITISV_032452 [Vitis vinifera] 95 1e-16
emb|CAN74303.1| hypothetical protein VITISV_032980 [Vitis vinifera] 87 2e-14
emb|CAN76821.1| hypothetical protein VITISV_017285 [Vitis vinifera] 84 2e-13
ref|XP_008238819.1| PREDICTED: uncharacterized protein LOC103337... 83 4e-13
ref|XP_006598425.1| PREDICTED: uncharacterized protein LOC100808... 83 5e-13
emb|CAN71445.1| hypothetical protein VITISV_042489 [Vitis vinifera] 83 5e-13
emb|CAN74536.1| hypothetical protein VITISV_023111 [Vitis vinifera] 81 2e-12
gb|AIC77183.1| polyprotein [Gossypium barbadense] 80 3e-12
dbj|BAB11200.1| copia-type polyprotein [Arabidopsis thaliana] gi... 80 4e-12
>emb|CAN74984.1| hypothetical protein VITISV_035210 [Vitis vinifera]
Length = 2408
Score = 145 bits (365), Expect = 9e-32
Identities = 66/121 (54%), Positives = 91/121 (75%), Gaps = 1/121 (0%)
Frame = +2
Query: 32 TKVVSDVYYIPKLKNNLLSIRQLQEKDLSVLILYRKCRVYQPRKGLIMHTYEWKKNVYLL 211
T+V++DV+YIP+LKNNLLS+ QLQE+ +++LI + CRVY P+KGLIM T K +++L
Sbjct: 289 TQVITDVFYIPELKNNLLSVGQLQERGVAILIQHGVCRVYHPKKGLIMQTAMSTKRMFIL 348
Query: 212 AAMVQIFF-ACFQIVSENESHLWHCWFGHLSYKGLMTLSYKKMVNRLPSLKTPKKLCTDC 388
+A + CFQ + E+ +HLWHC +GHLS+KGL TL YK+MV LP LK P K+CTDC
Sbjct: 349 SARILSKAPTCFQTILEDNTHLWHCRYGHLSFKGLRTLQYKQMVRGLPQLKAPSKICTDC 408
Query: 389 L 391
+
Sbjct: 409 M 409
>emb|CAN68842.1| hypothetical protein VITISV_023226 [Vitis vinifera]
Length = 1146
Score = 141 bits (356), Expect = 1e-30
Identities = 64/121 (52%), Positives = 89/121 (73%), Gaps = 1/121 (0%)
Frame = +2
Query: 32 TKVVSDVYYIPKLKNNLLSIRQLQEKDLSVLILYRKCRVYQPRKGLIMHTYEWKKNVY-L 208
T+V++DV+YIP+LKNNLLS+ QLQE+ +++LI + CRVY P+KG IM T + ++ L
Sbjct: 587 TQVITDVFYIPELKNNLLSVGQLQERGVAILIQHGVCRVYHPKKGFIMQTTMYANKMFIL 646
Query: 209 LAAMVQIFFACFQIVSENESHLWHCWFGHLSYKGLMTLSYKKMVNRLPSLKTPKKLCTDC 388
LA ++ CFQ + E+ +HLWHC +GHLS+KGL TL YK+M LP LK P K+CTDC
Sbjct: 647 LAKILSKASTCFQTILEDNTHLWHCRYGHLSFKGLRTLQYKQMGRGLPQLKAPSKICTDC 706
Query: 389 L 391
+
Sbjct: 707 M 707
>emb|CBI37296.3| unnamed protein product [Vitis vinifera]
Length = 3048
Score = 130 bits (328), Expect = 2e-27
Identities = 64/139 (46%), Positives = 90/139 (64%), Gaps = 1/139 (0%)
Frame = +2
Query: 20 VCRFTKVVSDVYYIPKLKNNLLSIRQLQEKDLSVLILYRKCRVYQPRKGLIMHTYEWKKN 199
V T++++ V+Y+P+LKNNLLSI QLQEK L++L + KC+V+ +KGLIM T
Sbjct: 368 VNEMTQIITGVFYVPELKNNLLSIGQLQEKGLTILFQHGKCKVFHSQKGLIMDTKMSSNR 427
Query: 200 VYLLAAMVQ-IFFACFQIVSENESHLWHCWFGHLSYKGLMTLSYKKMVNRLPSLKTPKKL 376
+++L A+ Q I CF V+E+ LWHC +GHLS++GL TL +KMVN LP + P KL
Sbjct: 428 MFMLYALSQPISSTCFNTVTEDILQLWHCRYGHLSFQGLKTLQQRKMVNGLPQFQPPSKL 487
Query: 377 CTDCLTNMYNEFRVLKYRN 433
C DCL + + K N
Sbjct: 488 CKDCLVGKQHRSSIPKKSN 506
>emb|CAN81156.1| hypothetical protein VITISV_016610 [Vitis vinifera]
Length = 1021
Score = 130 bits (326), Expect = 3e-27
Identities = 62/120 (51%), Positives = 83/120 (69%), Gaps = 1/120 (0%)
Frame = +2
Query: 35 KVVSDVYYIPKLKNNLLSIRQLQEKDLSVLILYRKCRVYQPRKGLIMHT-YEWKKNVYLL 211
++++ V+Y+P+LKNNLLSI QLQEK L +L +KC+V+ P KGLIM T ++ + LL
Sbjct: 223 QIITGVFYVPELKNNLLSIGQLQEKGLKILFQSKKCKVFHPEKGLIMETKMDFNRMFILL 282
Query: 212 AAMVQIFFACFQIVSENESHLWHCWFGHLSYKGLMTLSYKKMVNRLPSLKTPKKLCTDCL 391
A I ACF ++E+ LWHC +GHLS+KGL TL KKMVN LP LK+P + C CL
Sbjct: 283 AISQPIASACFNTITEDMVQLWHCRYGHLSFKGLKTLQQKKMVNGLPXLKSPSRXCMACL 342
>emb|CAN79845.1| hypothetical protein VITISV_027568 [Vitis vinifera]
Length = 1226
Score = 126 bits (316), Expect = 4e-26
Identities = 62/139 (44%), Positives = 88/139 (63%), Gaps = 1/139 (0%)
Frame = +2
Query: 20 VCRFTKVVSDVYYIPKLKNNLLSIRQLQEKDLSVLILYRKCRVYQPRKGLIMHTYEWKKN 199
V T++++ V+Y+P+LKNNLLSI QLQEK L++L + KC+V+ +K LIM T
Sbjct: 286 VNEMTQIITGVFYVPELKNNLLSIGQLQEKGLTILFQHGKCKVFHSQKXLIMDTKMSSNR 345
Query: 200 VYLLAAMVQ-IFFACFQIVSENESHLWHCWFGHLSYKGLMTLSYKKMVNRLPSLKTPKKL 376
+++L A+ Q I CF V+ + LWHC +GHLS++GL TL +KMVN LP + P KL
Sbjct: 346 MFMLHALSQPISSTCFNTVTADILQLWHCRYGHLSFQGLQTLQQRKMVNGLPQFQPPSKL 405
Query: 377 CTDCLTNMYNEFRVLKYRN 433
C DCL + + K N
Sbjct: 406 CKDCLVGKQHRSSIPKKSN 424
>emb|CAN65188.1| hypothetical protein VITISV_004365 [Vitis vinifera]
Length = 1265
Score = 126 bits (316), Expect = 4e-26
Identities = 60/122 (49%), Positives = 81/122 (66%), Gaps = 1/122 (0%)
Frame = +2
Query: 50 VYYIPKLKNNLLSIRQLQEKDLSVLILYRKCRVYQPRKGLIMHTYEWKKNVYLLAAMVQ- 226
V+Y+P+LKNNLLSI QLQEK L++L KC+V+ P +G+I +++L A+ Q
Sbjct: 337 VFYVPELKNNLLSIGQLQEKGLTILFQSGKCKVFHPERGVITEMKMSSNRMFMLHAISQP 396
Query: 227 IFFACFQIVSENESHLWHCWFGHLSYKGLMTLSYKKMVNRLPSLKTPKKLCTDCLTNMYN 406
I CF ++E+ HLWHC +GHLS+KGL TL KKMVN LP LK+P +LC DCL
Sbjct: 397 IASTCFNAITEDIVHLWHCRYGHLSFKGLKTLQQKKMVNGLPQLKSPLRLCKDCLVGKQQ 456
Query: 407 EF 412
+
Sbjct: 457 RY 458
>emb|CAB75932.1| putative protein [Arabidopsis thaliana]
Length = 1339
Score = 119 bits (297), Expect = 7e-24
Identities = 61/124 (49%), Positives = 83/124 (66%), Gaps = 3/124 (2%)
Frame = +2
Query: 32 TKVVSDVYYIPKLKNNLLSIRQLQEKDLSVLILYRKCRVYQPRKGLIMHT-YEWKKNVYL 208
T+V+ +VYY+P+L+NNLLS+ QLQE+ L++LI C+VY P KG IM T + +L
Sbjct: 352 TQVIPEVYYVPELRNNLLSLGQLQERGLAILIRDGTCKVYHPSKGAIMETNMSGNRMFFL 411
Query: 209 LAAMVQIFFACFQI--VSENESHLWHCWFGHLSYKGLMTLSYKKMVNRLPSLKTPKKLCT 382
LA+ Q C Q V + E+HLWHC FGHL+ +GL L++KKMV LP LK K++C
Sbjct: 412 LASKPQKNSLCLQTEEVMDKENHLWHCRFGHLNQEGLKLLAHKKMVIGLPILKATKEICA 471
Query: 383 DCLT 394
CLT
Sbjct: 472 ICLT 475
>ref|XP_006579317.1| PREDICTED: uncharacterized protein LOC102667209 [Glycine max]
Length = 366
Score = 117 bits (292), Expect = 3e-23
Identities = 63/121 (52%), Positives = 79/121 (65%), Gaps = 1/121 (0%)
Frame = +2
Query: 32 TKVVSDVYYIPKLKNNLLSIRQLQEKDLSVLILYRKCRVYQPRKGLIMH-TYEWKKNVYL 208
T+V+S VYYI +LKNNLLSI QLQEK LS+LI RKC+V P +G I+ + K L
Sbjct: 91 TRVISHVYYILELKNNLLSIGQLQEKGLSILIQNRKCKVSHPERGQILEIEMKGNKMFVL 150
Query: 209 LAAMVQIFFACFQIVSENESHLWHCWFGHLSYKGLMTLSYKKMVNRLPSLKTPKKLCTDC 388
A + CFQ+ E S LWH FGHLSY GL TLS K+MVN LP++ P+++CT
Sbjct: 151 TATKPPLNSTCFQMELEEGSQLWHNRFGHLSYSGLKTLSSKQMVNGLPTVTVPRQICTHY 210
Query: 389 L 391
L
Sbjct: 211 L 211
>ref|XP_008342460.1| PREDICTED: uncharacterized protein LOC103405261 [Malus domestica]
Length = 208
Score = 111 bits (278), Expect = 1e-21
Identities = 56/120 (46%), Positives = 78/120 (65%), Gaps = 1/120 (0%)
Frame = +2
Query: 35 KVVSDVYYIPKLKNNLLSIRQLQEKDLSVLILYRKCRVYQPRKGLIMHT-YEWKKNVYLL 211
+VV+ V+Y+P+LKNNLLSIRQLQEK L+VL+ + KC+++ P KGLI T + +L
Sbjct: 68 QVVTGVFYVPELKNNLLSIRQLQEKGLAVLMQHGKCKIFHPEKGLITKTEMSCNQMFVVL 127
Query: 212 AAMVQIFFACFQIVSENESHLWHCWFGHLSYKGLMTLSYKKMVNRLPSLKTPKKLCTDCL 391
A C + ++S LWHC +GHLS+ GL L KKMV+RLP +K +C +CL
Sbjct: 128 AQCPSKEQRCLSSLXIDQSQLWHCRYGHLSWNGLKILQQKKMVDRLPQIKAHLTVCENCL 187
>gb|KHN36591.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94,
partial [Glycine soja]
Length = 430
Score = 110 bits (274), Expect = 3e-21
Identities = 54/90 (60%), Positives = 66/90 (73%), Gaps = 1/90 (1%)
Frame = +2
Query: 29 FTKVVSDVYYIPKLKNNLLSIRQLQEKDLSVLILYRKCRVYQPRKGLIMHT-YEWKKNVY 205
FT+ +S VYY+P+LKNNLLSI QLQEK L++LI + KCRVY KGLIM + +
Sbjct: 341 FTQAISGVYYVPELKNNLLSIGQLQEKGLTILIQHGKCRVYHSEKGLIMQSDMSGNRMFS 400
Query: 206 LLAAMVQIFFACFQIVSENESHLWHCWFGH 295
+LA M+ +CFQIVSENESHLWHC FGH
Sbjct: 401 VLATMIPKASSCFQIVSENESHLWHCRFGH 430
>emb|CAN75114.1| hypothetical protein VITISV_001420 [Vitis vinifera]
Length = 1095
Score = 105 bits (262), Expect = 8e-20
Identities = 59/137 (43%), Positives = 77/137 (56%), Gaps = 1/137 (0%)
Frame = +2
Query: 29 FTKVVSDVYYIPKLKNNLLSIRQLQEKDLSVLILYRKCRVYQPRKGLIMHTYEWKKNVY- 205
F V+ V+Y+P+LKNNLLSI QLQEK L+++I C++Y P KGLI+ T ++
Sbjct: 286 FNYVLKAVFYVPELKNNLLSIGQLQEKGLAIMIHDGLCKIYHPGKGLIIQTAMSTNRMFT 345
Query: 206 LLAAMVQIFFACFQIVSENESHLWHCWFGHLSYKGLMTLSYKKMVNRLPSLKTPKKLCTD 385
LL + CFQ S+ HLWH +GHLS+KGL L K MV LP L CTD
Sbjct: 346 LLTNKQEKKEVCFQASSQELYHLWHRRYGHLSHKGLNILXTKNMVRGLPHLLPTTLXCTD 405
Query: 386 CLTNMYNEFRVLKYRNC 436
CL + + K C
Sbjct: 406 CLNGKQHRDPIPKKNIC 422
>emb|CAN74283.1| hypothetical protein VITISV_032452 [Vitis vinifera]
Length = 1338
Score = 94.7 bits (234), Expect = 1e-16
Identities = 45/109 (41%), Positives = 67/109 (61%), Gaps = 1/109 (0%)
Frame = +2
Query: 68 LKNNLLSIRQLQEKDLSVLILYRKCRVYQPRKGLIMHTYEWKKNVYLLAAMVQIFFA-CF 244
+ NNLLS+ QLQEK ++LI + KC++Y P +GLIM +++L A + C
Sbjct: 396 MANNLLSVGQLQEKGXAILIQHGKCKIYHPDRGLIMEIAMSSNRMFILPAQKLLKEEICL 455
Query: 245 QIVSENESHLWHCWFGHLSYKGLMTLSYKKMVNRLPSLKTPKKLCTDCL 391
+E+++ LWH +GHLS+ L TL K++VN LP + P K+C DCL
Sbjct: 456 SSFTEDQARLWHLRYGHLSFNXLKTLQQKRLVNGLPQFQAPLKVCEDCL 504
>emb|CAN74303.1| hypothetical protein VITISV_032980 [Vitis vinifera]
Length = 1283
Score = 87.4 bits (215), Expect = 2e-14
Identities = 44/130 (33%), Positives = 70/130 (53%)
Frame = +2
Query: 35 KVVSDVYYIPKLKNNLLSIRQLQEKDLSVLILYRKCRVYQPRKGLIMHTYEWKKNVYLLA 214
+++S+V+++P LK NLLS+ QLQEK + I CR+ + GLI ++ L
Sbjct: 347 QIISNVFFVPDLKTNLLSVXQLQEKGYEIFIKDGVCRIQDEKLGLIAQVNMTTNRMFPLY 406
Query: 215 AMVQIFFACFQIVSENESHLWHCWFGHLSYKGLMTLSYKKMVNRLPSLKTPKKLCTDCLT 394
+ CF +E LWH +GHL++ GL TL K MV LP + TP ++C +C+
Sbjct: 407 -LDNTTQNCFSTKLMDEGWLWHFRYGHLNFGGLKTLQQKNMVTGLPPIXTPSQICEECVV 465
Query: 395 NMYNEFRVLK 424
+ ++ K
Sbjct: 466 GKQHRYQFPK 475
>emb|CAN76821.1| hypothetical protein VITISV_017285 [Vitis vinifera]
Length = 672
Score = 84.0 bits (206), Expect = 2e-13
Identities = 43/121 (35%), Positives = 66/121 (54%)
Frame = +2
Query: 29 FTKVVSDVYYIPKLKNNLLSIRQLQEKDLSVLILYRKCRVYQPRKGLIMHTYEWKKNVYL 208
F + +S+V+Y+P LK+NLLS QLQEK + I C +Y P +G I ++
Sbjct: 238 FVETISNVFYVPDLKSNLLSAGQLQEKGYIITIQKGACEIYDPSRGAIAVVQMGSNRLFP 297
Query: 209 LAAMVQIFFACFQIVSENESHLWHCWFGHLSYKGLMTLSYKKMVNRLPSLKTPKKLCTDC 388
L F ++ ++ S LWH +GHL++ GL TL K MV LP + P ++C +C
Sbjct: 298 LKIDSVQSFLMAEV--KDLSWLWHLRYGHLNFGGLKTLQQKHMVTGLPQISIPSQVCEEC 355
Query: 389 L 391
+
Sbjct: 356 V 356
>ref|XP_008238819.1| PREDICTED: uncharacterized protein LOC103337440 [Prunus mume]
Length = 230
Score = 83.2 bits (204), Expect = 4e-13
Identities = 45/115 (39%), Positives = 68/115 (59%), Gaps = 1/115 (0%)
Frame = +2
Query: 38 VVSDVYYIPKLKNNLLSIRQLQEKDLSVLILYRKCRVYQPRKGLIMHT-YEWKKNVYLLA 214
V+ V+YIP L+ NLLSI QLQEK L+VLI + KC+++ ++GLIM T K +LA
Sbjct: 112 VIIGVFYIPDLQKNLLSIGQLQEKGLTVLIQHGKCKIFHSKRGLIMETKISHNKMFAVLA 171
Query: 215 AMVQIFFACFQIVSENESHLWHCWFGHLSYKGLMTLSYKKMVNRLPSLKTPKKLC 379
CF ++ +++ L H +GH ++ GL L K+MV LP +++C
Sbjct: 172 GYSTKEQKCFSSLTIDQAQLSHYRYGHHNWNGLKVLQQKQMVEGLPQFTASQRVC 226
>ref|XP_006598425.1| PREDICTED: uncharacterized protein LOC100808159 [Glycine max]
Length = 1550
Score = 82.8 bits (203), Expect = 5e-13
Identities = 44/121 (36%), Positives = 64/121 (52%)
Frame = +2
Query: 29 FTKVVSDVYYIPKLKNNLLSIRQLQEKDLSVLILYRKCRVYQPRKGLIMHTYEWKKNVYL 208
F + +S+V Y P LK+NLLS QLQEK I C +Y +G I ++
Sbjct: 1027 FVETISNVLYAPDLKSNLLSAGQLQEKGYVNTIQKGACEIYDLVRGAIAIVQMSSNRLFP 1086
Query: 209 LAAMVQIFFACFQIVSENESHLWHCWFGHLSYKGLMTLSYKKMVNRLPSLKTPKKLCTDC 388
L ++ CF+ E+ S LWH +GHL++ GL TL K MV LP + P ++C +C
Sbjct: 1087 LK--IESIQTCFKTDMEDPSWLWHFRYGHLNFSGLKTLQQKNMVTCLPQINIPSQVCEEC 1144
Query: 389 L 391
+
Sbjct: 1145 V 1145
>emb|CAN71445.1| hypothetical protein VITISV_042489 [Vitis vinifera]
Length = 1246
Score = 82.8 bits (203), Expect = 5e-13
Identities = 42/130 (32%), Positives = 69/130 (53%)
Frame = +2
Query: 35 KVVSDVYYIPKLKNNLLSIRQLQEKDLSVLILYRKCRVYQPRKGLIMHTYEWKKNVYLLA 214
K++S+V+++P LK LLS+ QLQEK + I CR+ + GLI ++ L
Sbjct: 347 KIISNVFFVPDLKTTLLSVGQLQEKGYEIFIKDGVCRIQDEKLGLIAQVNMTTNRMFPLY 406
Query: 215 AMVQIFFACFQIVSENESHLWHCWFGHLSYKGLMTLSYKKMVNRLPSLKTPKKLCTDCLT 394
+ CF + +E LWH +GHL++ L TL K MV LP ++T ++C +C+
Sbjct: 407 -LDNTTQNCFSVKLMDEGWLWHFRYGHLNFXXLKTLQXKNMVTGLPXIQTXSQICEECVX 465
Query: 395 NMYNEFRVLK 424
+ ++ K
Sbjct: 466 GKQHRYQFPK 475
>emb|CAN74536.1| hypothetical protein VITISV_023111 [Vitis vinifera]
Length = 1278
Score = 81.3 bits (199), Expect = 2e-12
Identities = 43/121 (35%), Positives = 65/121 (53%)
Frame = +2
Query: 29 FTKVVSDVYYIPKLKNNLLSIRQLQEKDLSVLILYRKCRVYQPRKGLIMHTYEWKKNVYL 208
F + +S V+Y+P LK+NLLS QLQEK + I C +Y P +G I ++
Sbjct: 352 FVETISYVFYVPDLKSNLLSAGQLQEKGYIITIQKGACEIYDPSRGAIDVVQMASNRLFP 411
Query: 209 LAAMVQIFFACFQIVSENESHLWHCWFGHLSYKGLMTLSYKKMVNRLPSLKTPKKLCTDC 388
L F ++ ++ S LWH +GHL++ GL TL K MV LP + P ++C +C
Sbjct: 412 LKIDSVQSFLMAEV--KDLSWLWHLRYGHLNFGGLKTLQQKHMVTGLPQISIPSQVCEEC 469
Query: 389 L 391
+
Sbjct: 470 V 470
>gb|AIC77183.1| polyprotein [Gossypium barbadense]
Length = 1369
Score = 80.5 bits (197), Expect = 3e-12
Identities = 44/119 (36%), Positives = 65/119 (54%)
Frame = +2
Query: 35 KVVSDVYYIPKLKNNLLSIRQLQEKDLSVLILYRKCRVYQPRKGLIMHTYEWKKNVYLLA 214
K +SDVYY+P LK+NL+S+ QL EK V + R + + + G ++ + +N
Sbjct: 406 KYISDVYYVPALKSNLISLGQLLEKGYEVHMKDRSLAI-RNKSGELVVRVDMTRNRLFTL 464
Query: 215 AMVQIFFACFQIVSENESHLWHCWFGHLSYKGLMTLSYKKMVNRLPSLKTPKKLCTDCL 391
+ C + +NES LWH +GHL + GL LS MVN LPS+ P +LC C+
Sbjct: 465 DIESGEVKCMKTDLKNESWLWHLRYGHLGFSGLKLLSKTNMVNGLPSINHPDQLCEACV 523
>dbj|BAB11200.1| copia-type polyprotein [Arabidopsis thaliana]
gi|13872710|emb|CAC37622.1| polyprotein [Arabidopsis
thaliana]
Length = 1334
Score = 80.1 bits (196), Expect = 4e-12
Identities = 46/127 (36%), Positives = 77/127 (60%), Gaps = 8/127 (6%)
Frame = +2
Query: 35 KVVSDVYYIPKLKNNLLSIRQLQEKDLSVLILYRKCRV-YQPRKGLIMHTYEWKKNVYLL 211
+V+SDVY++P LKNNL S+ QLQ+K L +I C V ++ K ++MH+ K ++++
Sbjct: 350 QVISDVYFVPGLKNNLFSVGQLQQKGLRFIIEGDVCEVWHKTEKRMVMHSTMTKNRMFVV 409
Query: 212 AAMVQIF-----FACFQIVSENESHLWHCWFGHLSYKGLMTLSYKKMVNRLP--SLKTPK 370
A V+ C Q++ + +++WH FGHL+++GL +L+ K+MV LP L +
Sbjct: 410 FAAVKKSKETEETRCLQVIGK-ANNMWHKRFGHLNHQGLRSLAEKEMVKGLPKFDLGEEE 468
Query: 371 KLCTDCL 391
+C CL
Sbjct: 469 AVCDICL 475