BLASTX nr result

ID: Forsythia22_contig00010953 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Forsythia22_contig00010953
         (1256 letters)

Database: ./nr 
           69,698,275 sequences; 24,982,196,650 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_011095595.1| PREDICTED: cold-inducible RNA-binding protei...    72   7e-10
ref|XP_012854980.1| PREDICTED: cold-inducible RNA-binding protei...    67   2e-08
emb|CDP09008.1| unnamed protein product [Coffea canephora]             67   2e-08
ref|XP_002284323.1| PREDICTED: glycine-rich RNA-binding protein ...    64   2e-07
ref|XP_010112904.1| Cold-inducible RNA-binding protein [Morus no...    61   2e-06
ref|XP_010313557.1| PREDICTED: cold-inducible RNA-binding protei...    61   2e-06
ref|XP_007208554.1| hypothetical protein PRUPE_ppa024320mg [Prun...    61   2e-06
ref|XP_012443631.1| PREDICTED: cold-inducible RNA-binding protei...    60   3e-06
gb|KHG10601.1| Cold-inducible RNA-binding [Gossypium arboreum]         60   3e-06
ref|XP_006363377.1| PREDICTED: cold-inducible RNA-binding protei...    59   6e-06
ref|XP_002533105.1| cold-inducible RNA binding protein, putative...    59   8e-06
ref|XP_002864655.1| predicted protein [Arabidopsis lyrata subsp....    59   8e-06

>ref|XP_011095595.1| PREDICTED: cold-inducible RNA-binding protein-like [Sesamum indicum]
          Length = 92

 Score = 72.4 bits (176), Expect = 7e-10
 Identities = 45/92 (48%), Positives = 54/92 (58%), Gaps = 25/92 (27%)
 Frame = +1

Query: 1036 MARRISSELFIS---------------------XXXXXXXXXXXQRTKGFAFVKFASEVN 1152
            MARR++SELF+S                                QR KGF FVKFASE++
Sbjct: 1    MARRVASELFVSRLSFYITTGELKRLFSPFGLIEEVRLIKDPRTQRPKGFGFVKFASELD 60

Query: 1153 AQNAVKAMNGRIVNGRLIFVEFAD----GKRS 1236
            AQNA+KAMNGRIV+GRLIFVEFA+    GKR+
Sbjct: 61   AQNALKAMNGRIVDGRLIFVEFAETTKPGKRT 92


>ref|XP_012854980.1| PREDICTED: cold-inducible RNA-binding protein-like [Erythranthe
            guttatus]
          Length = 98

 Score = 67.4 bits (163), Expect = 2e-08
 Identities = 41/95 (43%), Positives = 53/95 (55%), Gaps = 21/95 (22%)
 Frame = +1

Query: 1030 TQMARRISSELFISXXXXXXXXXXX---------------------QRTKGFAFVKFASE 1146
            TQMA+R++S LFI+                                QR KGF FVKF+SE
Sbjct: 4    TQMAKRVASVLFINRLSFYTTTTKLEKLFSPFGSIEEVRLIKDPRTQRPKGFGFVKFSSE 63

Query: 1147 VNAQNAVKAMNGRIVNGRLIFVEFADGKRSAETSS 1251
            ++AQNA+K+MN RIV+GRLIFVEFA   +   T+S
Sbjct: 64   IDAQNALKSMNCRIVDGRLIFVEFAKSTKLDNTTS 98


>emb|CDP09008.1| unnamed protein product [Coffea canephora]
          Length = 92

 Score = 67.4 bits (163), Expect = 2e-08
 Identities = 34/49 (69%), Positives = 39/49 (79%)
 Frame = +1

Query: 1105 QRTKGFAFVKFASEVNAQNAVKAMNGRIVNGRLIFVEFADGKRSAETSS 1251
            +RTKGF FV+F SE +AQNA+KAMNGRIVNGRLIFVE A   RS   +S
Sbjct: 44   RRTKGFGFVQFDSETDAQNALKAMNGRIVNGRLIFVEVAKTTRSENQTS 92


>ref|XP_002284323.1| PREDICTED: glycine-rich RNA-binding protein 4, mitochondrial [Vitis
            vinifera] gi|297746123|emb|CBI16179.3| unnamed protein
            product [Vitis vinifera]
          Length = 112

 Score = 63.9 bits (154), Expect = 2e-07
 Identities = 32/49 (65%), Positives = 37/49 (75%)
 Frame = +1

Query: 1105 QRTKGFAFVKFASEVNAQNAVKAMNGRIVNGRLIFVEFADGKRSAETSS 1251
            QR KGF FVKF SEV+A+ A+KAMNGRIV GRLIFVE A   R  E ++
Sbjct: 63   QRPKGFGFVKFESEVDAEKALKAMNGRIVRGRLIFVEIAKTTRPGEDAT 111


>ref|XP_010112904.1| Cold-inducible RNA-binding protein [Morus notabilis]
            gi|587948820|gb|EXC35053.1| Cold-inducible RNA-binding
            protein [Morus notabilis]
          Length = 94

 Score = 61.2 bits (147), Expect = 2e-06
 Identities = 38/93 (40%), Positives = 48/93 (51%), Gaps = 21/93 (22%)
 Frame = +1

Query: 1036 MARRISSELFISXXXXXXXXXXX---------------------QRTKGFAFVKFASEVN 1152
            MA+R+SS+LF+S                                QR KGF FV + SEV 
Sbjct: 1    MAKRLSSQLFVSRLSSYTTNEHLKKLFSPFGEVLEARLVLDSKTQRPKGFGFVTYESEVE 60

Query: 1153 AQNAVKAMNGRIVNGRLIFVEFADGKRSAETSS 1251
            AQ A+KAMNGRIV+GRLIFVE A   +  E ++
Sbjct: 61   AQKALKAMNGRIVDGRLIFVEVAKTSKPGEEAT 93


>ref|XP_010313557.1| PREDICTED: cold-inducible RNA-binding protein [Solanum lycopersicum]
          Length = 94

 Score = 60.8 bits (146), Expect = 2e-06
 Identities = 29/49 (59%), Positives = 37/49 (75%)
 Frame = +1

Query: 1105 QRTKGFAFVKFASEVNAQNAVKAMNGRIVNGRLIFVEFADGKRSAETSS 1251
            QR KGF FV F SE +AQNA+ ++NGRIV+GRLIFVE A+   +AE  +
Sbjct: 43   QRPKGFGFVTFESEADAQNALNSLNGRIVDGRLIFVEVAETTEAAENKT 91


>ref|XP_007208554.1| hypothetical protein PRUPE_ppa024320mg [Prunus persica]
            gi|462404196|gb|EMJ09753.1| hypothetical protein
            PRUPE_ppa024320mg [Prunus persica]
          Length = 94

 Score = 60.8 bits (146), Expect = 2e-06
 Identities = 28/46 (60%), Positives = 36/46 (78%)
 Frame = +1

Query: 1105 QRTKGFAFVKFASEVNAQNAVKAMNGRIVNGRLIFVEFADGKRSAE 1242
            QR KGF FV + S+V AQ A+KAMNGR+V+GRLIFVEFA  ++  +
Sbjct: 45   QRPKGFGFVTYKSDVEAQKALKAMNGRMVDGRLIFVEFAQNQKQEQ 90


>ref|XP_012443631.1| PREDICTED: cold-inducible RNA-binding protein-like [Gossypium
            raimondii] gi|763788731|gb|KJB55727.1| hypothetical
            protein B456_009G091800 [Gossypium raimondii]
            gi|763788733|gb|KJB55729.1| hypothetical protein
            B456_009G091800 [Gossypium raimondii]
            gi|763788734|gb|KJB55730.1| hypothetical protein
            B456_009G091800 [Gossypium raimondii]
          Length = 94

 Score = 60.5 bits (145), Expect = 3e-06
 Identities = 29/42 (69%), Positives = 33/42 (78%)
 Frame = +1

Query: 1105 QRTKGFAFVKFASEVNAQNAVKAMNGRIVNGRLIFVEFADGK 1230
            QR KGF FV F +E  AQ A+KAMNGRIV GRLIFVE+A+ K
Sbjct: 45   QRPKGFGFVTFETEAEAQKALKAMNGRIVRGRLIFVEYANDK 86


>gb|KHG10601.1| Cold-inducible RNA-binding [Gossypium arboreum]
          Length = 94

 Score = 60.5 bits (145), Expect = 3e-06
 Identities = 29/42 (69%), Positives = 33/42 (78%)
 Frame = +1

Query: 1105 QRTKGFAFVKFASEVNAQNAVKAMNGRIVNGRLIFVEFADGK 1230
            QR KGF FV F +E  AQ A+KAMNGRIV GRLIFVE+A+ K
Sbjct: 45   QRPKGFGFVTFETEAEAQKALKAMNGRIVRGRLIFVEYANDK 86


>ref|XP_006363377.1| PREDICTED: cold-inducible RNA-binding protein-like [Solanum
            tuberosum]
          Length = 125

 Score = 59.3 bits (142), Expect = 6e-06
 Identities = 28/49 (57%), Positives = 36/49 (73%)
 Frame = +1

Query: 1105 QRTKGFAFVKFASEVNAQNAVKAMNGRIVNGRLIFVEFADGKRSAETSS 1251
            QR KGF FV F SE +AQNA+ ++NGRIV+GRLIFVE A+   + E  +
Sbjct: 74   QRPKGFGFVTFESEADAQNALNSLNGRIVDGRLIFVEVAETTEAVENKT 122


>ref|XP_002533105.1| cold-inducible RNA binding protein, putative [Ricinus communis]
            gi|223527096|gb|EEF29277.1| cold-inducible RNA binding
            protein, putative [Ricinus communis]
          Length = 94

 Score = 58.9 bits (141), Expect = 8e-06
 Identities = 30/49 (61%), Positives = 35/49 (71%)
 Frame = +1

Query: 1105 QRTKGFAFVKFASEVNAQNAVKAMNGRIVNGRLIFVEFADGKRSAETSS 1251
            Q+ KGF FV F SE  AQ A+KAMNGRIV+GRL+FVE A    S E +S
Sbjct: 45   QKPKGFGFVTFDSESQAQKALKAMNGRIVDGRLLFVEVAKSINSGEDAS 93


>ref|XP_002864655.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
            gi|297310490|gb|EFH40914.1| predicted protein
            [Arabidopsis lyrata subsp. lyrata]
          Length = 95

 Score = 58.9 bits (141), Expect = 8e-06
 Identities = 28/39 (71%), Positives = 33/39 (84%)
 Frame = +1

Query: 1105 QRTKGFAFVKFASEVNAQNAVKAMNGRIVNGRLIFVEFA 1221
            QR KGF F+ F SE +AQNA+KA+NG+IVNGRLIFVE A
Sbjct: 45   QRPKGFGFITFESEDDAQNALKALNGKIVNGRLIFVEAA 83


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