BLASTX nr result

ID: Forsythia22_contig00010886 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Forsythia22_contig00010886
         (290 letters)

Database: ./nr 
           69,698,275 sequences; 24,982,196,650 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_011080931.1| PREDICTED: mediator of RNA polymerase II tra...   110   3e-22
ref|XP_012847212.1| PREDICTED: mediator of RNA polymerase II tra...   105   1e-20
ref|XP_006436855.1| hypothetical protein CICLE_v10032864mg [Citr...    82   1e-13
ref|XP_009615880.1| PREDICTED: mediator of RNA polymerase II tra...    81   2e-13
ref|XP_008221191.1| PREDICTED: mediator of RNA polymerase II tra...    81   2e-13
ref|XP_012090682.1| PREDICTED: mediator of RNA polymerase II tra...    81   2e-13
ref|XP_007223516.1| hypothetical protein PRUPE_ppa011908mg [Prun...    81   2e-13
ref|XP_008387893.1| PREDICTED: mediator of RNA polymerase II tra...    80   4e-13
ref|XP_004244509.1| PREDICTED: mediator of RNA polymerase II tra...    80   7e-13
ref|XP_011044124.1| PREDICTED: mediator of RNA polymerase II tra...    79   2e-12
ref|XP_011044123.1| PREDICTED: mediator of RNA polymerase II tra...    79   2e-12
ref|XP_009769931.1| PREDICTED: mediator of RNA polymerase II tra...    79   2e-12
ref|XP_002318134.1| hypothetical protein POPTR_0012s10100g [Popu...    79   2e-12
ref|XP_011023990.1| PREDICTED: mediator of RNA polymerase II tra...    78   2e-12
ref|XP_010484084.1| PREDICTED: mediator of RNA polymerase II tra...    78   2e-12
ref|XP_009334475.1| PREDICTED: mediator of RNA polymerase II tra...    78   2e-12
ref|XP_002511168.1| conserved hypothetical protein [Ricinus comm...    78   2e-12
ref|XP_004291292.1| PREDICTED: mediator of RNA polymerase II tra...    78   2e-12
emb|CDP07896.1| unnamed protein product [Coffea canephora]             77   3e-12
ref|XP_007037998.1| Uncharacterized protein isoform 3 [Theobroma...    77   4e-12

>ref|XP_011080931.1| PREDICTED: mediator of RNA polymerase II transcription subunit 30
           [Sesamum indicum]
          Length = 217

 Score =  110 bits (276), Expect = 3e-22
 Identities = 53/64 (82%), Positives = 62/64 (96%)
 Frame = -2

Query: 196 MEDKPSTLSSSPTSANYTTPKTPQELAIDGQKHLEETIEAAFLILSAMNDELCNPNLWST 17
           ME+KPST+SSSPTS+NYTT KT QELAI+GQKHLEET+E+AFLILSAMNDELCNPNLWST
Sbjct: 1   MEEKPSTMSSSPTSSNYTT-KTTQELAIEGQKHLEETVESAFLILSAMNDELCNPNLWST 59

Query: 16  TTTS 5
           T+++
Sbjct: 60  TSSA 63


>ref|XP_012847212.1| PREDICTED: mediator of RNA polymerase II transcription subunit 30
           [Erythranthe guttatus] gi|604317127|gb|EYU29203.1|
           hypothetical protein MIMGU_mgv1a013715mg [Erythranthe
           guttata]
          Length = 212

 Score =  105 bits (262), Expect = 1e-20
 Identities = 51/65 (78%), Positives = 59/65 (90%)
 Frame = -2

Query: 196 MEDKPSTLSSSPTSANYTTPKTPQELAIDGQKHLEETIEAAFLILSAMNDELCNPNLWST 17
           ME+KPS LSSSPTS NY T KT QEL+++GQ HLEETI+AAFLILSAMNDELCNP+LWST
Sbjct: 1   MEEKPSNLSSSPTSGNYAT-KTTQELSVEGQNHLEETIDAAFLILSAMNDELCNPSLWST 59

Query: 16  TTTSA 2
           T+T+A
Sbjct: 60  TSTAA 64


>ref|XP_006436855.1| hypothetical protein CICLE_v10032864mg [Citrus clementina]
           gi|568880628|ref|XP_006493212.1| PREDICTED: mediator of
           RNA polymerase II transcription subunit 30-like [Citrus
           sinensis] gi|557539051|gb|ESR50095.1| hypothetical
           protein CICLE_v10032864mg [Citrus clementina]
          Length = 183

 Score = 82.0 bits (201), Expect = 1e-13
 Identities = 41/55 (74%), Positives = 45/55 (81%)
 Frame = -2

Query: 169 SSPTSANYTTPKTPQELAIDGQKHLEETIEAAFLILSAMNDELCNPNLWSTTTTS 5
           +S  S   TT KT QELA +GQKHLEETIEAAF ILS+MNDELCNP LWSTTTT+
Sbjct: 4   TSGVSNAATTSKTTQELAKEGQKHLEETIEAAFQILSSMNDELCNPTLWSTTTTT 58


>ref|XP_009615880.1| PREDICTED: mediator of RNA polymerase II transcription subunit 30
           [Nicotiana tomentosiformis]
          Length = 191

 Score = 81.3 bits (199), Expect = 2e-13
 Identities = 38/48 (79%), Positives = 42/48 (87%)
 Frame = -2

Query: 145 TTPKTPQELAIDGQKHLEETIEAAFLILSAMNDELCNPNLWSTTTTSA 2
           T PKT QELA++GQKHLE+TIEAA  ILSAMNDELCNP LWSTTT +A
Sbjct: 9   TNPKTIQELAVEGQKHLEDTIEAAHQILSAMNDELCNPTLWSTTTNTA 56


>ref|XP_008221191.1| PREDICTED: mediator of RNA polymerase II transcription subunit 30
           [Prunus mume]
          Length = 191

 Score = 81.3 bits (199), Expect = 2e-13
 Identities = 37/46 (80%), Positives = 43/46 (93%)
 Frame = -2

Query: 145 TTPKTPQELAIDGQKHLEETIEAAFLILSAMNDELCNPNLWSTTTT 8
           T+PKT QELA++GQKHLEETIEAAF ILS+MNDELCNP LWSTT++
Sbjct: 7   TSPKTTQELAMEGQKHLEETIEAAFQILSSMNDELCNPTLWSTTSS 52


>ref|XP_012090682.1| PREDICTED: mediator of RNA polymerase II transcription subunit 30
           [Jatropha curcas] gi|802771051|ref|XP_012090683.1|
           PREDICTED: mediator of RNA polymerase II transcription
           subunit 30 [Jatropha curcas] gi|643706475|gb|KDP22607.1|
           hypothetical protein JCGZ_26438 [Jatropha curcas]
          Length = 191

 Score = 81.3 bits (199), Expect = 2e-13
 Identities = 36/49 (73%), Positives = 45/49 (91%)
 Frame = -2

Query: 154 ANYTTPKTPQELAIDGQKHLEETIEAAFLILSAMNDELCNPNLWSTTTT 8
           ++ T PKT QELA++GQKHLEETI+AA+ ILS+MNDELCNPNLWSTT++
Sbjct: 7   SSITLPKTTQELALEGQKHLEETIQAAYQILSSMNDELCNPNLWSTTSS 55


>ref|XP_007223516.1| hypothetical protein PRUPE_ppa011908mg [Prunus persica]
           gi|462420452|gb|EMJ24715.1| hypothetical protein
           PRUPE_ppa011908mg [Prunus persica]
          Length = 191

 Score = 81.3 bits (199), Expect = 2e-13
 Identities = 37/46 (80%), Positives = 43/46 (93%)
 Frame = -2

Query: 145 TTPKTPQELAIDGQKHLEETIEAAFLILSAMNDELCNPNLWSTTTT 8
           T+PKT QELA++GQKHLEETIEAAF ILS+MNDELCNP LWSTT++
Sbjct: 7   TSPKTTQELAMEGQKHLEETIEAAFQILSSMNDELCNPTLWSTTSS 52


>ref|XP_008387893.1| PREDICTED: mediator of RNA polymerase II transcription subunit 30
           [Malus domestica]
          Length = 194

 Score = 80.5 bits (197), Expect = 4e-13
 Identities = 37/47 (78%), Positives = 43/47 (91%)
 Frame = -2

Query: 142 TPKTPQELAIDGQKHLEETIEAAFLILSAMNDELCNPNLWSTTTTSA 2
           +PKT QELA++GQKHLEETIEAAF ILS+MNDELCNP LWSTT T++
Sbjct: 12  SPKTTQELAMEGQKHLEETIEAAFQILSSMNDELCNPTLWSTTGTAS 58


>ref|XP_004244509.1| PREDICTED: mediator of RNA polymerase II transcription subunit 30
           [Solanum lycopersicum]
          Length = 198

 Score = 79.7 bits (195), Expect = 7e-13
 Identities = 37/48 (77%), Positives = 43/48 (89%)
 Frame = -2

Query: 145 TTPKTPQELAIDGQKHLEETIEAAFLILSAMNDELCNPNLWSTTTTSA 2
           T+PKT QELA++GQKHLE+TIEAA  ILSAMNDELCNP+LWST  T+A
Sbjct: 8   TSPKTIQELAVEGQKHLEDTIEAAHQILSAMNDELCNPSLWSTLNTAA 55


>ref|XP_011044124.1| PREDICTED: mediator of RNA polymerase II transcription subunit
           30-like isoform X2 [Populus euphratica]
          Length = 189

 Score = 78.6 bits (192), Expect = 2e-12
 Identities = 38/54 (70%), Positives = 46/54 (85%)
 Frame = -2

Query: 166 SPTSANYTTPKTPQELAIDGQKHLEETIEAAFLILSAMNDELCNPNLWSTTTTS 5
           SP +  ++  KT QELAI+GQKHLEETI+AA+ ILS+MNDELCNP LWSTT+TS
Sbjct: 9   SPVTPQHS--KTTQELAIEGQKHLEETIQAAYQILSSMNDELCNPTLWSTTSTS 60


>ref|XP_011044123.1| PREDICTED: mediator of RNA polymerase II transcription subunit
           30-like isoform X1 [Populus euphratica]
          Length = 207

 Score = 78.6 bits (192), Expect = 2e-12
 Identities = 38/54 (70%), Positives = 46/54 (85%)
 Frame = -2

Query: 166 SPTSANYTTPKTPQELAIDGQKHLEETIEAAFLILSAMNDELCNPNLWSTTTTS 5
           SP +  ++  KT QELAI+GQKHLEETI+AA+ ILS+MNDELCNP LWSTT+TS
Sbjct: 9   SPVTPQHS--KTTQELAIEGQKHLEETIQAAYQILSSMNDELCNPTLWSTTSTS 60


>ref|XP_009769931.1| PREDICTED: mediator of RNA polymerase II transcription subunit 30
           [Nicotiana sylvestris]
          Length = 194

 Score = 78.6 bits (192), Expect = 2e-12
 Identities = 40/65 (61%), Positives = 48/65 (73%)
 Frame = -2

Query: 196 MEDKPSTLSSSPTSANYTTPKTPQELAIDGQKHLEETIEAAFLILSAMNDELCNPNLWST 17
           ME+K  T+++         PKT QELA++GQKHLE+TIEAA  ILSAMNDELCNP LWST
Sbjct: 1   MEEKGGTMAN---------PKTIQELAVEGQKHLEDTIEAAHQILSAMNDELCNPTLWST 51

Query: 16  TTTSA 2
           T  +A
Sbjct: 52  TPNTA 56


>ref|XP_002318134.1| hypothetical protein POPTR_0012s10100g [Populus trichocarpa]
           gi|118486707|gb|ABK95190.1| unknown [Populus
           trichocarpa] gi|222858807|gb|EEE96354.1| hypothetical
           protein POPTR_0012s10100g [Populus trichocarpa]
          Length = 185

 Score = 78.6 bits (192), Expect = 2e-12
 Identities = 38/54 (70%), Positives = 46/54 (85%)
 Frame = -2

Query: 166 SPTSANYTTPKTPQELAIDGQKHLEETIEAAFLILSAMNDELCNPNLWSTTTTS 5
           SP +  ++  KT QELAI+GQKHLEETI+AA+ ILS+MNDELCNP LWSTT+TS
Sbjct: 9   SPVTPQHS--KTTQELAIEGQKHLEETIQAAYQILSSMNDELCNPTLWSTTSTS 60


>ref|XP_011023990.1| PREDICTED: mediator of RNA polymerase II transcription subunit
           30-like [Populus euphratica]
          Length = 195

 Score = 78.2 bits (191), Expect = 2e-12
 Identities = 38/63 (60%), Positives = 49/63 (77%)
 Frame = -2

Query: 196 MEDKPSTLSSSPTSANYTTPKTPQELAIDGQKHLEETIEAAFLILSAMNDELCNPNLWST 17
           ME   + +S SP +  ++  KT QELAI+GQKHLEETI+A + ILS+MNDELCNP LWST
Sbjct: 1   MEYNSNPISPSPATPQHS--KTTQELAIEGQKHLEETIQAGYQILSSMNDELCNPTLWST 58

Query: 16  TTT 8
           ++T
Sbjct: 59  SST 61


>ref|XP_010484084.1| PREDICTED: mediator of RNA polymerase II transcription subunit 30
           isoform X1 [Camelina sativa]
           gi|727626500|ref|XP_010484085.1| PREDICTED: mediator of
           RNA polymerase II transcription subunit 30 isoform X1
           [Camelina sativa]
          Length = 187

 Score = 78.2 bits (191), Expect = 2e-12
 Identities = 36/48 (75%), Positives = 43/48 (89%)
 Frame = -2

Query: 145 TTPKTPQELAIDGQKHLEETIEAAFLILSAMNDELCNPNLWSTTTTSA 2
           TT  T QELA++G+KHLEETIEAAF I+SAMNDELCNP+LWST+ TS+
Sbjct: 8   TTTMTTQELAMEGEKHLEETIEAAFQIVSAMNDELCNPSLWSTSATSS 55


>ref|XP_009334475.1| PREDICTED: mediator of RNA polymerase II transcription subunit 30
           [Pyrus x bretschneideri]
          Length = 194

 Score = 78.2 bits (191), Expect = 2e-12
 Identities = 36/47 (76%), Positives = 42/47 (89%)
 Frame = -2

Query: 142 TPKTPQELAIDGQKHLEETIEAAFLILSAMNDELCNPNLWSTTTTSA 2
           +PK  QELA++GQKHLEETIEAAF ILS+MNDELCNP LWSTT T++
Sbjct: 12  SPKMTQELAMEGQKHLEETIEAAFQILSSMNDELCNPTLWSTTGTAS 58


>ref|XP_002511168.1| conserved hypothetical protein [Ricinus communis]
           gi|223550283|gb|EEF51770.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 196

 Score = 78.2 bits (191), Expect = 2e-12
 Identities = 36/52 (69%), Positives = 44/52 (84%)
 Frame = -2

Query: 160 TSANYTTPKTPQELAIDGQKHLEETIEAAFLILSAMNDELCNPNLWSTTTTS 5
           T +  T  KT QELA++GQKHLEETI+AA+ ILS+MNDELCNP LWSTT++S
Sbjct: 5   TMSTITQSKTTQELAMEGQKHLEETIQAAYQILSSMNDELCNPTLWSTTSSS 56


>ref|XP_004291292.1| PREDICTED: mediator of RNA polymerase II transcription subunit
           30-like [Fragaria vesca subsp. vesca]
          Length = 180

 Score = 78.2 bits (191), Expect = 2e-12
 Identities = 35/58 (60%), Positives = 46/58 (79%)
 Frame = -2

Query: 175 LSSSPTSANYTTPKTPQELAIDGQKHLEETIEAAFLILSAMNDELCNPNLWSTTTTSA 2
           +  +  +A  T PKT QELA++GQKHLEETI++AF ILS+MNDELCNP LW T +++A
Sbjct: 1   MEENEANATVTNPKTTQELAVEGQKHLEETIQSAFQILSSMNDELCNPLLWPTDSSAA 58


>emb|CDP07896.1| unnamed protein product [Coffea canephora]
          Length = 209

 Score = 77.4 bits (189), Expect = 3e-12
 Identities = 39/60 (65%), Positives = 45/60 (75%)
 Frame = -2

Query: 196 MEDKPSTLSSSPTSANYTTPKTPQELAIDGQKHLEETIEAAFLILSAMNDELCNPNLWST 17
           MEDK  T  +   +      KT QELA++GQKHLEETIE+AF ILS+MNDELCNPNLWST
Sbjct: 1   MEDKAGTAGAVAVAG-----KTIQELAVEGQKHLEETIESAFQILSSMNDELCNPNLWST 55


>ref|XP_007037998.1| Uncharacterized protein isoform 3 [Theobroma cacao]
           gi|508775243|gb|EOY22499.1| Uncharacterized protein
           isoform 3 [Theobroma cacao]
          Length = 143

 Score = 77.0 bits (188), Expect = 4e-12
 Identities = 41/65 (63%), Positives = 50/65 (76%)
 Frame = -2

Query: 196 MEDKPSTLSSSPTSANYTTPKTPQELAIDGQKHLEETIEAAFLILSAMNDELCNPNLWST 17
           ME+ P   +++PTS+N    KT QELA +G KHLEETIEAAF ILS+MNDELCNP LWST
Sbjct: 1   MEENPLN-ATTPTSSN---TKTTQELAAEGLKHLEETIEAAFQILSSMNDELCNPALWST 56

Query: 16  TTTSA 2
             +S+
Sbjct: 57  IPSSS 61


Top