BLASTX nr result
ID: Forsythia22_contig00010803
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Forsythia22_contig00010803
(479 letters)
Database: ./nr
69,698,275 sequences; 24,982,196,650 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_006350582.1| PREDICTED: RNA polymerase sigma factor sigE,... 124 2e-26
ref|XP_009785134.1| PREDICTED: RNA polymerase sigma factor sigE,... 124 3e-26
ref|XP_009601650.1| PREDICTED: RNA polymerase sigma factor sigE,... 123 5e-26
ref|XP_010317478.1| PREDICTED: RNA polymerase sigma factor sigE,... 117 2e-24
ref|XP_012858574.1| PREDICTED: RNA polymerase sigma factor sigE,... 117 2e-24
ref|XP_004234180.1| PREDICTED: RNA polymerase sigma factor sigE,... 117 2e-24
ref|XP_004234179.1| PREDICTED: RNA polymerase sigma factor sigE,... 117 2e-24
ref|XP_011084487.1| PREDICTED: RNA polymerase sigma factor sigE,... 116 7e-24
emb|CDP05091.1| unnamed protein product [Coffea canephora] 107 2e-21
ref|XP_002268709.1| PREDICTED: RNA polymerase sigma factor sigE,... 105 1e-20
ref|XP_010097858.1| RNA polymerase sigma factor rpoD [Morus nota... 102 1e-19
gb|AKC88737.1| sigma factor [Francoa sonchifolia] 101 2e-19
ref|XP_007038959.1| Sigma factor E isoform 1 [Theobroma cacao] g... 101 2e-19
ref|XP_010266467.1| PREDICTED: RNA polymerase sigma factor sigE,... 98 2e-18
ref|XP_007219010.1| hypothetical protein PRUPE_ppa004259mg [Prun... 98 2e-18
ref|XP_007219009.1| hypothetical protein PRUPE_ppa004259mg [Prun... 98 2e-18
gb|KHG11410.1| RNA polymerase sigma factor rpoD [Gossypium arbor... 97 3e-18
ref|XP_012440029.1| PREDICTED: RNA polymerase sigma factor sigE,... 97 4e-18
gb|KJB52622.1| hypothetical protein B456_008G270500 [Gossypium r... 97 4e-18
ref|XP_006376620.1| RNA polymerase sigma subunit SigE family pro... 97 5e-18
>ref|XP_006350582.1| PREDICTED: RNA polymerase sigma factor sigE,
chloroplastic/mitochondrial-like [Solanum tuberosum]
Length = 516
Score = 124 bits (312), Expect = 2e-26
Identities = 64/96 (66%), Positives = 81/96 (84%)
Frame = -1
Query: 290 VSTSAARTPLGLSTKFSTRLSSVKRPVILSFKTDKTKNTALVGPRESVSLPVETAKDNEK 111
VS+SA+R+PLGLS++FSTRL +KRPVI+SFK DKTKNT L+ P+ES+SL +ET+K+NEK
Sbjct: 6 VSSSASRSPLGLSSRFSTRLCPLKRPVIVSFKKDKTKNTTLIAPKESISLSIETSKENEK 65
Query: 110 RLRVVKKRSERVHAVLTDEVISSTSTLDLDYNEAAA 3
R R V KRSERVHAV + +S STL+LDY+EAAA
Sbjct: 66 RSRRVSKRSERVHAVAIE---ASPSTLELDYSEAAA 98
>ref|XP_009785134.1| PREDICTED: RNA polymerase sigma factor sigE,
chloroplastic/mitochondrial [Nicotiana sylvestris]
Length = 519
Score = 124 bits (310), Expect = 3e-26
Identities = 63/96 (65%), Positives = 80/96 (83%)
Frame = -1
Query: 290 VSTSAARTPLGLSTKFSTRLSSVKRPVILSFKTDKTKNTALVGPRESVSLPVETAKDNEK 111
VS+SA+R+PLGLST+FS L +KRPV++SFK DKTK T LV P+ES+SLP+ET+K+NEK
Sbjct: 6 VSSSASRSPLGLSTRFSAHLCPLKRPVVVSFKKDKTKKTTLVAPKESISLPIETSKENEK 65
Query: 110 RLRVVKKRSERVHAVLTDEVISSTSTLDLDYNEAAA 3
R R V KR+ERVHAV D + +STS L+LDY+EAAA
Sbjct: 66 RSRRVSKRTERVHAVSID-IEASTSPLELDYSEAAA 100
>ref|XP_009601650.1| PREDICTED: RNA polymerase sigma factor sigE,
chloroplastic/mitochondrial [Nicotiana tomentosiformis]
Length = 519
Score = 123 bits (308), Expect = 5e-26
Identities = 63/96 (65%), Positives = 79/96 (82%)
Frame = -1
Query: 290 VSTSAARTPLGLSTKFSTRLSSVKRPVILSFKTDKTKNTALVGPRESVSLPVETAKDNEK 111
VS+SA+R+PLGLST FS L +KRPV++SFK DKTK T LV P+ES+SLP+ET+K+NEK
Sbjct: 6 VSSSASRSPLGLSTSFSAHLCPLKRPVVVSFKKDKTKKTTLVAPKESISLPIETSKENEK 65
Query: 110 RLRVVKKRSERVHAVLTDEVISSTSTLDLDYNEAAA 3
R R V KR+ERVHAV D + +S STL+LDY+EAAA
Sbjct: 66 RSRRVSKRTERVHAVSID-IEASPSTLELDYSEAAA 100
>ref|XP_010317478.1| PREDICTED: RNA polymerase sigma factor sigE,
chloroplastic/mitochondrial isoform X3 [Solanum
lycopersicum]
Length = 437
Score = 117 bits (294), Expect = 2e-24
Identities = 61/96 (63%), Positives = 78/96 (81%)
Frame = -1
Query: 290 VSTSAARTPLGLSTKFSTRLSSVKRPVILSFKTDKTKNTALVGPRESVSLPVETAKDNEK 111
VS+SA+R+PLGLS++FS RL +KRPVI+SFK D TKNT LV P+ES+S P+ET+K+NEK
Sbjct: 6 VSSSASRSPLGLSSRFSARLCPLKRPVIVSFKKDITKNTTLVSPKESISSPIETSKENEK 65
Query: 110 RLRVVKKRSERVHAVLTDEVISSTSTLDLDYNEAAA 3
R R V KR+ERVHAV + + STL+LDY+EAAA
Sbjct: 66 RSRRVSKRTERVHAVTIE---APPSTLELDYSEAAA 98
>ref|XP_012858574.1| PREDICTED: RNA polymerase sigma factor sigE,
chloroplastic/mitochondrial-like [Erythranthe guttatus]
gi|604299780|gb|EYU19623.1| hypothetical protein
MIMGU_mgv1a020453mg [Erythranthe guttata]
Length = 515
Score = 117 bits (294), Expect = 2e-24
Identities = 60/96 (62%), Positives = 76/96 (79%)
Frame = -1
Query: 290 VSTSAARTPLGLSTKFSTRLSSVKRPVILSFKTDKTKNTALVGPRESVSLPVETAKDNEK 111
VSTSA+RT LGL+ ++ TR+S ++RPV+ +FK DK K L+ PRES +LP+E KDNEK
Sbjct: 6 VSTSASRTSLGLNERYLTRVSILRRPVVFAFKNDKIKKIVLISPRESAALPLEATKDNEK 65
Query: 110 RLRVVKKRSERVHAVLTDEVISSTSTLDLDYNEAAA 3
RLR VKKR+ERV+AV TDE + ST+DLDYNEAAA
Sbjct: 66 RLRKVKKRAERVNAVSTDE--APPSTIDLDYNEAAA 99
>ref|XP_004234180.1| PREDICTED: RNA polymerase sigma factor sigE,
chloroplastic/mitochondrial isoform X2 [Solanum
lycopersicum]
Length = 487
Score = 117 bits (294), Expect = 2e-24
Identities = 61/96 (63%), Positives = 78/96 (81%)
Frame = -1
Query: 290 VSTSAARTPLGLSTKFSTRLSSVKRPVILSFKTDKTKNTALVGPRESVSLPVETAKDNEK 111
VS+SA+R+PLGLS++FS RL +KRPVI+SFK D TKNT LV P+ES+S P+ET+K+NEK
Sbjct: 6 VSSSASRSPLGLSSRFSARLCPLKRPVIVSFKKDITKNTTLVSPKESISSPIETSKENEK 65
Query: 110 RLRVVKKRSERVHAVLTDEVISSTSTLDLDYNEAAA 3
R R V KR+ERVHAV + + STL+LDY+EAAA
Sbjct: 66 RSRRVSKRTERVHAVTIE---APPSTLELDYSEAAA 98
>ref|XP_004234179.1| PREDICTED: RNA polymerase sigma factor sigE,
chloroplastic/mitochondrial isoform X1 [Solanum
lycopersicum]
Length = 516
Score = 117 bits (294), Expect = 2e-24
Identities = 61/96 (63%), Positives = 78/96 (81%)
Frame = -1
Query: 290 VSTSAARTPLGLSTKFSTRLSSVKRPVILSFKTDKTKNTALVGPRESVSLPVETAKDNEK 111
VS+SA+R+PLGLS++FS RL +KRPVI+SFK D TKNT LV P+ES+S P+ET+K+NEK
Sbjct: 6 VSSSASRSPLGLSSRFSARLCPLKRPVIVSFKKDITKNTTLVSPKESISSPIETSKENEK 65
Query: 110 RLRVVKKRSERVHAVLTDEVISSTSTLDLDYNEAAA 3
R R V KR+ERVHAV + + STL+LDY+EAAA
Sbjct: 66 RSRRVSKRTERVHAVTIE---APPSTLELDYSEAAA 98
>ref|XP_011084487.1| PREDICTED: RNA polymerase sigma factor sigE,
chloroplastic/mitochondrial-like [Sesamum indicum]
Length = 518
Score = 116 bits (290), Expect = 7e-24
Identities = 63/96 (65%), Positives = 74/96 (77%)
Frame = -1
Query: 290 VSTSAARTPLGLSTKFSTRLSSVKRPVILSFKTDKTKNTALVGPRESVSLPVETAKDNEK 111
VS+SAARTPLGL ++ TR+S +R VILSFK DK KN AL+ PRESV+LP+E K+ EK
Sbjct: 6 VSSSAARTPLGLDARYLTRVSLCRRQVILSFKNDKNKNIALIAPRESVALPLEAKKEKEK 65
Query: 110 RLRVVKKRSERVHAVLTDEVISSTSTLDLDYNEAAA 3
R R VKK ERV AV TDE +S ST+DLDYNEAAA
Sbjct: 66 RSRKVKKLVERVSAVSTDE--ASPSTIDLDYNEAAA 99
>emb|CDP05091.1| unnamed protein product [Coffea canephora]
Length = 530
Score = 107 bits (268), Expect = 2e-21
Identities = 59/96 (61%), Positives = 74/96 (77%)
Frame = -1
Query: 290 VSTSAARTPLGLSTKFSTRLSSVKRPVILSFKTDKTKNTALVGPRESVSLPVETAKDNEK 111
VS+SAAR+PLGL+ K +TR+S +RP ++ FK KTKN ALV PRES+SLPVE + NEK
Sbjct: 6 VSSSAARSPLGLNAKLATRISQPRRPSLVPFKNGKTKNAALVAPRESLSLPVEGSNVNEK 65
Query: 110 RLRVVKKRSERVHAVLTDEVISSTSTLDLDYNEAAA 3
RL+ V KR ERV AV E +++STL+LDYNEAAA
Sbjct: 66 RLKRVVKRPERVKAVSALE--AASSTLELDYNEAAA 99
>ref|XP_002268709.1| PREDICTED: RNA polymerase sigma factor sigE,
chloroplastic/mitochondrial [Vitis vinifera]
gi|302143685|emb|CBI22546.3| unnamed protein product
[Vitis vinifera]
Length = 518
Score = 105 bits (262), Expect = 1e-20
Identities = 54/95 (56%), Positives = 71/95 (74%)
Frame = -1
Query: 287 STSAARTPLGLSTKFSTRLSSVKRPVILSFKTDKTKNTALVGPRESVSLPVETAKDNEKR 108
S SA+RTP GL+ KFS + ++RP++L+FK DK KN ALV P E + LP+ET+KD++KR
Sbjct: 9 SASASRTPFGLNAKFSNHQTPLRRPLVLAFKADKAKNIALVTPHEPIPLPIETSKDHKKR 68
Query: 107 LRVVKKRSERVHAVLTDEVISSTSTLDLDYNEAAA 3
LR K S+RV AV TDEV S +++LDYNEAAA
Sbjct: 69 LRRASKPSKRVKAVSTDEV--SPCSVELDYNEAAA 101
>ref|XP_010097858.1| RNA polymerase sigma factor rpoD [Morus notabilis]
gi|587883538|gb|EXB72455.1| RNA polymerase sigma factor
rpoD [Morus notabilis]
Length = 517
Score = 102 bits (254), Expect = 1e-19
Identities = 56/97 (57%), Positives = 74/97 (76%), Gaps = 1/97 (1%)
Frame = -1
Query: 290 VSTSAARTPLGLSTKFSTRLSSV-KRPVILSFKTDKTKNTALVGPRESVSLPVETAKDNE 114
VS+SA+RTPLGLS KFS+ SSV K+P+I++FK DK+ T LV P++ + LPVET K+ +
Sbjct: 6 VSSSASRTPLGLSLKFSSNRSSVLKKPLIVAFKGDKSNKTVLVAPQDQIILPVETRKEVK 65
Query: 113 KRLRVVKKRSERVHAVLTDEVISSTSTLDLDYNEAAA 3
R+ KK S RV AV TDE +STST+++DYNEAAA
Sbjct: 66 SRVGKAKKSSNRVKAVATDE--ASTSTMEVDYNEAAA 100
>gb|AKC88737.1| sigma factor [Francoa sonchifolia]
Length = 513
Score = 101 bits (252), Expect = 2e-19
Identities = 55/96 (57%), Positives = 69/96 (71%)
Frame = -1
Query: 290 VSTSAARTPLGLSTKFSTRLSSVKRPVILSFKTDKTKNTALVGPRESVSLPVETAKDNEK 111
VS+S AR+PLGLSTKFST ++KRP I+S K DKT N ALV P+E + LP++T K K
Sbjct: 6 VSSSPARSPLGLSTKFSTHRCTLKRPSIVSLKADKTNNIALVAPQEQIPLPIQTPKKQRK 65
Query: 110 RLRVVKKRSERVHAVLTDEVISSTSTLDLDYNEAAA 3
RL K S+RV AV TD ++S TL+LD+NEAAA
Sbjct: 66 RLGRAIKTSKRVKAVSTD--VTSPCTLELDFNEAAA 99
>ref|XP_007038959.1| Sigma factor E isoform 1 [Theobroma cacao]
gi|590673674|ref|XP_007038960.1| Sigma factor E isoform
1 [Theobroma cacao] gi|508776204|gb|EOY23460.1| Sigma
factor E isoform 1 [Theobroma cacao]
gi|508776205|gb|EOY23461.1| Sigma factor E isoform 1
[Theobroma cacao]
Length = 516
Score = 101 bits (251), Expect = 2e-19
Identities = 54/96 (56%), Positives = 72/96 (75%)
Frame = -1
Query: 290 VSTSAARTPLGLSTKFSTRLSSVKRPVILSFKTDKTKNTALVGPRESVSLPVETAKDNEK 111
VS+SAARTPLGLSTKFST+ + +RP+ ++FK DK+ NTALV P+E + LP+ETAK++ K
Sbjct: 6 VSSSAARTPLGLSTKFSTQRCTSRRPLTVAFKADKSDNTALVTPQEHILLPIETAKEHPK 65
Query: 110 RLRVVKKRSERVHAVLTDEVISSTSTLDLDYNEAAA 3
R KK + V+ V TD+ S TL++DYNEAAA
Sbjct: 66 RRGKAKKDPKIVNHVFTDD--GSPCTLEVDYNEAAA 99
>ref|XP_010266467.1| PREDICTED: RNA polymerase sigma factor sigE,
chloroplastic/mitochondrial [Nelumbo nucifera]
Length = 514
Score = 98.2 bits (243), Expect = 2e-18
Identities = 49/96 (51%), Positives = 73/96 (76%)
Frame = -1
Query: 290 VSTSAARTPLGLSTKFSTRLSSVKRPVILSFKTDKTKNTALVGPRESVSLPVETAKDNEK 111
VS+S+++TPLGLS++FS + +KRP+IL+FKTDK K+ ALV E + LP++T K+N+K
Sbjct: 6 VSSSSSQTPLGLSSRFSVHQTQLKRPLILAFKTDKAKDRALVTHHEPIPLPMDTPKENQK 65
Query: 110 RLRVVKKRSERVHAVLTDEVISSTSTLDLDYNEAAA 3
RLR K S+RV V +DE +S+ T+++DYN+ AA
Sbjct: 66 RLRRATKPSKRVKVVCSDE--ASSCTIEMDYNDVAA 99
>ref|XP_007219010.1| hypothetical protein PRUPE_ppa004259mg [Prunus persica]
gi|462415472|gb|EMJ20209.1| hypothetical protein
PRUPE_ppa004259mg [Prunus persica]
Length = 519
Score = 97.8 bits (242), Expect = 2e-18
Identities = 48/96 (50%), Positives = 73/96 (76%)
Frame = -1
Query: 290 VSTSAARTPLGLSTKFSTRLSSVKRPVILSFKTDKTKNTALVGPRESVSLPVETAKDNEK 111
VS+SA+RTPLGLSTK + + S++++P+I++FKTD+ TALV P+E + LP+ET K ++K
Sbjct: 6 VSSSASRTPLGLSTKLTIQRSTLRKPLIVAFKTDEANKTALVAPQEKIPLPIETRKKHQK 65
Query: 110 RLRVVKKRSERVHAVLTDEVISSTSTLDLDYNEAAA 3
RL +K ++ V + TD ++S TL++DYNEAAA
Sbjct: 66 RLGKARKLAKSVKSATTD--VASPCTLEVDYNEAAA 99
>ref|XP_007219009.1| hypothetical protein PRUPE_ppa004259mg [Prunus persica]
gi|462415471|gb|EMJ20208.1| hypothetical protein
PRUPE_ppa004259mg [Prunus persica]
Length = 390
Score = 97.8 bits (242), Expect = 2e-18
Identities = 48/96 (50%), Positives = 73/96 (76%)
Frame = -1
Query: 290 VSTSAARTPLGLSTKFSTRLSSVKRPVILSFKTDKTKNTALVGPRESVSLPVETAKDNEK 111
VS+SA+RTPLGLSTK + + S++++P+I++FKTD+ TALV P+E + LP+ET K ++K
Sbjct: 6 VSSSASRTPLGLSTKLTIQRSTLRKPLIVAFKTDEANKTALVAPQEKIPLPIETRKKHQK 65
Query: 110 RLRVVKKRSERVHAVLTDEVISSTSTLDLDYNEAAA 3
RL +K ++ V + TD ++S TL++DYNEAAA
Sbjct: 66 RLGKARKLAKSVKSATTD--VASPCTLEVDYNEAAA 99
>gb|KHG11410.1| RNA polymerase sigma factor rpoD [Gossypium arboreum]
Length = 516
Score = 97.4 bits (241), Expect = 3e-18
Identities = 54/96 (56%), Positives = 69/96 (71%)
Frame = -1
Query: 290 VSTSAARTPLGLSTKFSTRLSSVKRPVILSFKTDKTKNTALVGPRESVSLPVETAKDNEK 111
VS+SAARTP+GL TKFST+ + +RP I++FK DK+ NTALV R+ LPVETAK++ K
Sbjct: 6 VSSSAARTPVGLGTKFSTQRCTFRRPCIMAFKADKSNNTALVTLRDHNLLPVETAKEHPK 65
Query: 110 RLRVVKKRSERVHAVLTDEVISSTSTLDLDYNEAAA 3
R KK S+ V+ TDE S T+D+DYNEAAA
Sbjct: 66 RRGKAKKASKTVNRDFTDE--GSPYTVDVDYNEAAA 99
>ref|XP_012440029.1| PREDICTED: RNA polymerase sigma factor sigE,
chloroplastic/mitochondrial [Gossypium raimondii]
gi|823214552|ref|XP_012440030.1| PREDICTED: RNA
polymerase sigma factor sigE,
chloroplastic/mitochondrial [Gossypium raimondii]
gi|763785552|gb|KJB52623.1| hypothetical protein
B456_008G270500 [Gossypium raimondii]
gi|763785553|gb|KJB52624.1| hypothetical protein
B456_008G270500 [Gossypium raimondii]
Length = 516
Score = 97.1 bits (240), Expect = 4e-18
Identities = 54/96 (56%), Positives = 69/96 (71%)
Frame = -1
Query: 290 VSTSAARTPLGLSTKFSTRLSSVKRPVILSFKTDKTKNTALVGPRESVSLPVETAKDNEK 111
VS+SAARTP+GL TKFST+ + +RP I++FK DK+ NTALV R+ LPVETAK++ K
Sbjct: 6 VSSSAARTPVGLGTKFSTQRCTFRRPCIVAFKADKSNNTALVTLRDHNLLPVETAKEHPK 65
Query: 110 RLRVVKKRSERVHAVLTDEVISSTSTLDLDYNEAAA 3
R KK S+ V+ TDE S T+D+DYNEAAA
Sbjct: 66 RRGKAKKASKTVNRDFTDE--GSPYTVDVDYNEAAA 99
>gb|KJB52622.1| hypothetical protein B456_008G270500 [Gossypium raimondii]
Length = 547
Score = 97.1 bits (240), Expect = 4e-18
Identities = 54/96 (56%), Positives = 69/96 (71%)
Frame = -1
Query: 290 VSTSAARTPLGLSTKFSTRLSSVKRPVILSFKTDKTKNTALVGPRESVSLPVETAKDNEK 111
VS+SAARTP+GL TKFST+ + +RP I++FK DK+ NTALV R+ LPVETAK++ K
Sbjct: 37 VSSSAARTPVGLGTKFSTQRCTFRRPCIVAFKADKSNNTALVTLRDHNLLPVETAKEHPK 96
Query: 110 RLRVVKKRSERVHAVLTDEVISSTSTLDLDYNEAAA 3
R KK S+ V+ TDE S T+D+DYNEAAA
Sbjct: 97 RRGKAKKASKTVNRDFTDE--GSPYTVDVDYNEAAA 130
>ref|XP_006376620.1| RNA polymerase sigma subunit SigE family protein [Populus
trichocarpa] gi|550326141|gb|ERP54417.1| RNA polymerase
sigma subunit SigE family protein [Populus trichocarpa]
Length = 512
Score = 96.7 bits (239), Expect = 5e-18
Identities = 56/96 (58%), Positives = 70/96 (72%)
Frame = -1
Query: 290 VSTSAARTPLGLSTKFSTRLSSVKRPVILSFKTDKTKNTALVGPRESVSLPVETAKDNEK 111
VS+SA+RTPLGLSTKFST S+ KRP+I++FK +K+ NT+LV P E + LPVET K +K
Sbjct: 6 VSSSASRTPLGLSTKFSTYGSTAKRPLIVAFKANKSNNTSLVAPHEQIPLPVETTK-GKK 64
Query: 110 RLRVVKKRSERVHAVLTDEVISSTSTLDLDYNEAAA 3
RL KK S R+ AV T+ S TL +DYNEAAA
Sbjct: 65 RLGKSKKSSNRLKAVRTE---VSPCTLLVDYNEAAA 97