BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Forsythia22_contig00010402
         (3254 letters)

Database: ./nr 
           69,698,275 sequences; 24,982,196,650 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_012847643.1| PREDICTED: DNA-directed RNA polymerase 1B, m...  1579   0.0  
sp|Q8L6J5.2|RPO1B_TOBAC RecName: Full=DNA-directed RNA polymeras...  1519   0.0  
ref|XP_006348633.1| PREDICTED: DNA-directed RNA polymerase 1, mi...  1518   0.0  
ref|XP_009627611.1| PREDICTED: DNA-directed RNA polymerase 1B, m...  1518   0.0  
emb|CAC82574.2| phage-type RNA polymerase [Nicotiana tabacum]        1517   0.0  
sp|Q93Y94.1|RPOT1_NICSY RecName: Full=DNA-directed RNA polymeras...  1515   0.0  
ref|NP_001289502.1| DNA-directed RNA polymerase 1, mitochondrial...  1514   0.0  
dbj|BAB69063.1| T7 bacteriophage-type single subunit RNA polymer...  1510   0.0  
ref|XP_004239009.1| PREDICTED: DNA-directed RNA polymerase 1, mi...  1509   0.0  
ref|XP_002267464.1| PREDICTED: DNA-directed RNA polymerase 1, mi...  1483   0.0  
ref|XP_010257888.1| PREDICTED: DNA-directed RNA polymerase 2B, c...  1476   0.0  
ref|XP_010261414.1| PREDICTED: DNA-directed RNA polymerase 2B, c...  1454   0.0  
ref|XP_007225383.1| hypothetical protein PRUPE_ppa000780mg [Prun...  1440   0.0  
ref|XP_008243783.1| PREDICTED: DNA-directed RNA polymerase 1, mi...  1432   0.0  
ref|XP_012438460.1| PREDICTED: DNA-directed RNA polymerase 1B, m...  1428   0.0  
ref|XP_009355625.1| PREDICTED: DNA-directed RNA polymerase 1, mi...  1424   0.0  
ref|XP_008389363.1| PREDICTED: DNA-directed RNA polymerase 1, mi...  1422   0.0  
ref|XP_008339743.1| PREDICTED: DNA-directed RNA polymerase 1B, m...  1420   0.0  
emb|CDP00493.1| unnamed protein product [Coffea canephora]           1420   0.0  
ref|XP_009356470.1| PREDICTED: DNA-directed RNA polymerase 1, mi...  1412   0.0  

>ref|XP_012847643.1| PREDICTED: DNA-directed RNA polymerase 1B, mitochondrial [Erythranthe
            guttatus] gi|604316708|gb|EYU28900.1| hypothetical
            protein MIMGU_mgv1a000798mg [Erythranthe guttata]
          Length = 983

 Score = 1579 bits (4089), Expect = 0.0
 Identities = 778/983 (79%), Positives = 850/983 (86%), Gaps = 5/983 (0%)
 Frame = -2

Query: 3016 MWRNLSKQSSLRKLNYFSESHSSLPVFCSVRSHQDLSFVERSVPLDLKDYVNTQNQELCF 2837
            MWRNLSKQS LR    FSESH S   F + +S +D  FVE +VP  L+  +NT   EL F
Sbjct: 1    MWRNLSKQSYLRNFKVFSESHPSPNAFSAGKSPKDSIFVENAVPRQLRSCINTCGSELGF 60

Query: 2836 SRDYSFWRN-QKIGCHKFAISSEPFGSTWSSRDYXXXXXXXXXXXXEDVDEIQELVEEMN 2660
             R   FWR  ++  C  +AISS  F    S+R Y            E+VDE+QEL+EE+N
Sbjct: 61   RRALVFWRPPREASCPNYAISSHTFRFFGSTRGYAAAAEALVSTSEEEVDELQELIEEIN 120

Query: 2659 KEIQEKG----QQKQPKMVGGMGVAKYNMLRRRQIKLETEAWEEAAKEYQELLVDMCEQK 2492
            KEI  K     +QKQPK+VGGMG+ KYN LRRRQIK+ETEAWE AAKEYQELL DMCEQK
Sbjct: 121  KEINVKSTDNREQKQPKLVGGMGLGKYNSLRRRQIKIETEAWENAAKEYQELLEDMCEQK 180

Query: 2491 LAPNLPYVKSLFLGWFEPLRDAIAAEQELCKKGKNRKSYAPNFDLLPAGMMAVITXXXXX 2312
            LAPNLPY+KSLFLGWFEPLRDAIAAEQ+LCK+GKNR +YAP FD LPA MMAVIT     
Sbjct: 181  LAPNLPYIKSLFLGWFEPLRDAIAAEQDLCKEGKNRGAYAPYFDQLPAEMMAVITMHKLM 240

Query: 2311 XXXXXXXXXGSARVVQAACHIGEAIEQEARIHRFLEKTKTKNALNRSSEEEPDPAVKEQE 2132
                     GSARVVQAACHIGEAIE E RIH+FL+  K KNALNR+SEE PDP  KEQ+
Sbjct: 241  GLLMTGGGNGSARVVQAACHIGEAIEHEVRIHKFLDNCKRKNALNRTSEEGPDPEAKEQD 300

Query: 2131 RLRKKVNILMKKQKLHQVRKIVKQQDDLKPWGQDAQVKIGCRLIQILMETAHIQPPVDQL 1952
            RLRKKV ILMKKQK+ QVR IV+ QDDLKPWGQDAQVK+GCRLIQIL +TA+IQPPVDQ 
Sbjct: 301  RLRKKVKILMKKQKVQQVRNIVRHQDDLKPWGQDAQVKVGCRLIQILTQTAYIQPPVDQR 360

Query: 1951 EDGPPDIRPAFVHSLKTVETQRGSRRYGVIECDPLVRKGLEKTARHMVIPYMPMLVPPLH 1772
            +DG PDIRPAFVH+LK VET +GSRRYGVIECDPLVRKG+EKTARHMVIPYMPMLVPPL+
Sbjct: 361  DDGAPDIRPAFVHTLKCVETLKGSRRYGVIECDPLVRKGMEKTARHMVIPYMPMLVPPLN 420

Query: 1771 WTGYDRGAYLFLPSYIMRTHGAKQQREAVKRVPRKQLEPVFEALNTLGNTKWKVNKRILG 1592
            WTGY+RGAYLFLPSY+MRTHGAKQQREAVKR P+++LEP+F+ALNTLGNTKW+VNKRIL 
Sbjct: 421  WTGYERGAYLFLPSYMMRTHGAKQQREAVKRTPKQELEPIFQALNTLGNTKWRVNKRILS 480

Query: 1591 VVDRIWASGGQLADLVDREDVPLPEEPDTEDXXXXXXXXXXXXXXXXENSERHSQRCDIE 1412
            VVDRIWA+GG+LADLVDRED+PLPEEPDTED                 NSERHSQRCDIE
Sbjct: 481  VVDRIWANGGRLADLVDREDLPLPEEPDTEDEAEIKKWKWKVKAVKKVNSERHSQRCDIE 540

Query: 1411 LKLAVSRKMKDEDGFYYPHNLDFRGRAYPMHPYLNHLGSDLCRGILEFAEGRPLGKSGLQ 1232
            LKLAV+RK+K+E+GFYYPHNLDFRGRAYPMHPYLNHLGSDLCRGILEFAEGRPLGKSGLQ
Sbjct: 541  LKLAVARKIKEEEGFYYPHNLDFRGRAYPMHPYLNHLGSDLCRGILEFAEGRPLGKSGLQ 600

Query: 1231 WLKIHLANLYGSGVDKLSYKGRIAFAENHLEDIFDSADRPLEGKRWWLGAEDPFQCLATC 1052
            WLK+HLANLYG GVDK SY GRI+F ENH+EDIFDSADRPLEGKRWWLGAEDPFQCLATC
Sbjct: 601  WLKVHLANLYGGGVDKFSYDGRISFTENHMEDIFDSADRPLEGKRWWLGAEDPFQCLATC 660

Query: 1051 MNLSEALRSPSPETTISHMPVHQDGSCNGLQHYAALGRDKLGAAAVNLVAGDKPADVYSG 872
            M+L+EALRSP PE+T+S++PVHQDGSCNGLQHYAALGRDKLGAAAVNLVAGDKPADVYSG
Sbjct: 661  MSLTEALRSPYPESTVSYIPVHQDGSCNGLQHYAALGRDKLGAAAVNLVAGDKPADVYSG 720

Query: 871  IATRVLDIMKRDAAKDPATDPNVMRARLLINQVDRKLVKQTVMTSVYGVTYIGARDQIKK 692
            IA RVLDIMKRDAAKDPA DPNVMRARLLINQVDRKLVKQTVMTSVYGVTYIGARDQIK+
Sbjct: 721  IAARVLDIMKRDAAKDPADDPNVMRARLLINQVDRKLVKQTVMTSVYGVTYIGARDQIKR 780

Query: 691  RLKERGAIEDDTELFSAACYAAKTTLTALGEMFEAARSIMSWLGDCAKIIALENEPVRWT 512
            RLKER ++EDDTELF+ ACYAAKTTLTALGEMFEAARSIMSWLGDCAKIIA EN PVRWT
Sbjct: 781  RLKERASMEDDTELFACACYAAKTTLTALGEMFEAARSIMSWLGDCAKIIATENHPVRWT 840

Query: 511  TPLGLPVVQPYRKLGRHLIKTSLQILTLQRETDKVMVKRQRTAFPPNFVHSLDGSHMMMT 332
            TPLGLPVVQPYRKLGRH+IKTSLQ+LTLQRETDKVM KRQRTAFPPNFVHSLDGSHMMMT
Sbjct: 841  TPLGLPVVQPYRKLGRHMIKTSLQVLTLQRETDKVMAKRQRTAFPPNFVHSLDGSHMMMT 900

Query: 331  AIACKDAGLNFAGVHDSYWTHACDVDQMNNILREKFVELYDAPILENLLESFQQSFPKLK 152
            AIAC +AGL+FAGVHDSYWTHACDVD+MN ILREKFVELY+APILENLL+ FQQSFPKLK
Sbjct: 901  AIACSEAGLSFAGVHDSYWTHACDVDKMNEILREKFVELYEAPILENLLDGFQQSFPKLK 960

Query: 151  FPPLPERGDFDLREVLESPYFFN 83
            FPPLPERGDFDLREVL+S YFFN
Sbjct: 961  FPPLPERGDFDLREVLDSTYFFN 983


>sp|Q8L6J5.2|RPO1B_TOBAC RecName: Full=DNA-directed RNA polymerase 1B, mitochondrial; AltName:
            Full=NictaRpoT1-tom; AltName: Full=T7 bacteriophage-type
            single subunit RNA polymerase 1B; Flags: Precursor
            [Nicotiana tabacum]
          Length = 1002

 Score = 1519 bits (3932), Expect = 0.0
 Identities = 776/1009 (76%), Positives = 838/1009 (83%), Gaps = 31/1009 (3%)
 Frame = -2

Query: 3016 MWRNLSKQSSLRKLNYFSESHSSLPVFCSVRSHQDLSFVERSVPLDLKDYVNTQNQELCF 2837
            MWR +SK +  RK   F  SH S  +  S  S    S   ++ PL      +T +  L  
Sbjct: 1    MWRYISKHAYSRK---FRNSHDSALLGFSQYS----SSFGKTRPLQCLCEESTTHPNLGL 53

Query: 2836 SRDYSFWRNQKIGCHKFAISSEPF---------GSTWSS-------------------RD 2741
            S++  F R  +   H   I  E            ST+SS                   R 
Sbjct: 54   SQNSIFSRISRKVRHLEGICEESSKNPHLGLSQNSTFSSVKGDFRICGKRGSGSLGRLRS 113

Query: 2740 YXXXXXXXXXXXXEDVDEIQELVEEMNKE---IQEKGQQKQPKMVGGMGVAKYNMLRRRQ 2570
            Y            ED+DEIQEL+EEM+KE   ++   Q KQPK +GGMGV KYN LRRRQ
Sbjct: 114  YGSAAEAIVSTSEEDIDEIQELIEEMDKENEALKANLQPKQPKTIGGMGVGKYNFLRRRQ 173

Query: 2569 IKLETEAWEEAAKEYQELLVDMCEQKLAPNLPYVKSLFLGWFEPLRDAIAAEQELCKKGK 2390
            IK+ETEAWEEAAKEYQELL+DMCEQKLAPNLPY+KSLFLGWFEPLRDAIAAEQ+LC +GK
Sbjct: 174  IKVETEAWEEAAKEYQELLMDMCEQKLAPNLPYMKSLFLGWFEPLRDAIAAEQKLCDEGK 233

Query: 2389 NRKSYAPNFDLLPAGMMAVITXXXXXXXXXXXXXXGSARVVQAACHIGEAIEQEARIHRF 2210
            NR +YAP FD LPA MMAVIT              GSARVVQAA +IGEAIE EARIHRF
Sbjct: 234  NRGAYAPFFDQLPAEMMAVITMHKLMGLLMTGGGTGSARVVQAASYIGEAIEHEARIHRF 293

Query: 2209 LEKTKTKNALNRSSEEEPDPAVKEQERLRKKVNILMKKQKLHQVRKIVKQQDDLKPWGQD 2030
            LEKTK  NAL+   EE P   +KE+ERLRKKV ILMKKQKL QVRKIVKQQDD KPWGQD
Sbjct: 294  LEKTKKSNALSGDLEETPGDMMKERERLRKKVKILMKKQKLRQVRKIVKQQDDEKPWGQD 353

Query: 2029 AQVKIGCRLIQILMETAHIQPPVDQLEDGPPDIRPAFVHSLKTVETQRGSRRYGVIECDP 1850
              VK+GCRLIQILMETA+IQPP DQL+DGPPDIRPAFVH+LKTVET +GSRRYGVI+CDP
Sbjct: 354  NLVKVGCRLIQILMETAYIQPPNDQLDDGPPDIRPAFVHTLKTVETMKGSRRYGVIQCDP 413

Query: 1849 LVRKGLEKTARHMVIPYMPMLVPPLHWTGYDRGAYLFLPSYIMRTHGAKQQREAVKRVPR 1670
            LVRKGL+KTARHMVIPYMPMLVPP  W GYD+G YLFLPSYIMRTHGAKQQREAVKRVP+
Sbjct: 414  LVRKGLDKTARHMVIPYMPMLVPPQSWLGYDKGGYLFLPSYIMRTHGAKQQREAVKRVPK 473

Query: 1669 KQLEPVFEALNTLGNTKWKVNKRILGVVDRIWASGGQLADLVDREDVPLPEEPDTEDXXX 1490
            KQLEPVF+AL+TLGNTKW+VN+++LG+VDRIWASGG+LADLVDREDVPLPE PDTED   
Sbjct: 474  KQLEPVFQALDTLGNTKWRVNRKVLGIVDRIWASGGRLADLVDREDVPLPEAPDTEDEAE 533

Query: 1489 XXXXXXXXXXXXXENSERHSQRCDIELKLAVSRKMKDEDGFYYPHNLDFRGRAYPMHPYL 1310
                         EN ERHSQRCDIELKLAV+RKMKDEDGFYYPHNLDFRGRAYPMHPYL
Sbjct: 534  IRKWKWKVKGVKKENCERHSQRCDIELKLAVARKMKDEDGFYYPHNLDFRGRAYPMHPYL 593

Query: 1309 NHLGSDLCRGILEFAEGRPLGKSGLQWLKIHLANLYGSGVDKLSYKGRIAFAENHLEDIF 1130
            NHLGSDLCRGILEFAEGRPLG SGL+WLKIHLAN+YG GVDKLSY+GR+AF+ENHLEDIF
Sbjct: 594  NHLGSDLCRGILEFAEGRPLGTSGLRWLKIHLANVYGGGVDKLSYEGRVAFSENHLEDIF 653

Query: 1129 DSADRPLEGKRWWLGAEDPFQCLATCMNLSEALRSPSPETTISHMPVHQDGSCNGLQHYA 950
            DSA+RPLEGKRWWLGAEDPFQCLATC+N++EALRSPSPET IS+MP+HQDGSCNGLQHYA
Sbjct: 654  DSAERPLEGKRWWLGAEDPFQCLATCINIAEALRSPSPETAISYMPIHQDGSCNGLQHYA 713

Query: 949  ALGRDKLGAAAVNLVAGDKPADVYSGIATRVLDIMKRDAAKDPATDPNVMRARLLINQVD 770
            ALGRDKLGAAAVNLVAGDKPADVYSGIA RVLDIMKRDAAKDPA DPNVMRARLLINQVD
Sbjct: 714  ALGRDKLGAAAVNLVAGDKPADVYSGIAARVLDIMKRDAAKDPANDPNVMRARLLINQVD 773

Query: 769  RKLVKQTVMTSVYGVTYIGARDQIKKRLKERGAIEDDTELFSAACYAAKTTLTALGEMFE 590
            RKLVKQTVMTSVYGVTYIGARDQIKKRLKERG IEDD ELF+AACYAAKTTLTALGEMFE
Sbjct: 774  RKLVKQTVMTSVYGVTYIGARDQIKKRLKERGVIEDDNELFAAACYAAKTTLTALGEMFE 833

Query: 589  AARSIMSWLGDCAKIIALENEPVRWTTPLGLPVVQPYRKLGRHLIKTSLQILTLQRETDK 410
            AARSIMSWLGDCAKIIA+EN PVRWTTPLGLPVVQPYRKLGRHLIKTSLQILTLQRETDK
Sbjct: 834  AARSIMSWLGDCAKIIAMENHPVRWTTPLGLPVVQPYRKLGRHLIKTSLQILTLQRETDK 893

Query: 409  VMVKRQRTAFPPNFVHSLDGSHMMMTAIACKDAGLNFAGVHDSYWTHACDVDQMNNILRE 230
            VMVKRQRTAFPPNFVHSLDGSHMMMTAIACK++GL+FAGVHDSYWTHACDVDQMN ILRE
Sbjct: 894  VMVKRQRTAFPPNFVHSLDGSHMMMTAIACKESGLSFAGVHDSYWTHACDVDQMNKILRE 953

Query: 229  KFVELYDAPILENLLESFQQSFPKLKFPPLPERGDFDLREVLESPYFFN 83
            KFVELYDAPILENLLESFQQSFP L+FPPLPERGDFDLREVLESPYFFN
Sbjct: 954  KFVELYDAPILENLLESFQQSFPDLQFPPLPERGDFDLREVLESPYFFN 1002


>ref|XP_006348633.1| PREDICTED: DNA-directed RNA polymerase 1, mitochondrial-like [Solanum
            tuberosum]
          Length = 993

 Score = 1518 bits (3931), Expect = 0.0
 Identities = 774/994 (77%), Positives = 840/994 (84%), Gaps = 16/994 (1%)
 Frame = -2

Query: 3016 MWRNLSKQSSLRKLNYFSESH--SSLPVFCSVRSHQDL-SFVERSVPLDLKD---YVNTQ 2855
            MWR +SKQ+  RKL    +S        F   R  Q L   + R+  L +     +    
Sbjct: 1    MWRYISKQAYSRKLRNTHDSDFLGFAQSFGKTRPLQGLCEEIYRNPNLGVSQSSIFTRVN 60

Query: 2854 NQELCFS-RDYSFWRNQKIGCHKFAISSEP------FGSTWSSRDYXXXXXXXXXXXXED 2696
             +  C         RN  +G  + +I S         GS    R Y            ED
Sbjct: 61   GKSRCLDGMCEDSCRNHYLGFSESSIFSRVKGDFRVCGSLGILRSYGSAAEAIASTSEED 120

Query: 2695 VDEIQELVEEMNKE---IQEKGQQKQPKMVGGMGVAKYNMLRRRQIKLETEAWEEAAKEY 2525
            +DEIQEL+EEMNKE   ++   Q KQPK VGGMG+ KYN+LRRRQIK+ETEAWE+AAKEY
Sbjct: 121  IDEIQELIEEMNKENEALKTNLQPKQPKTVGGMGIGKYNLLRRRQIKVETEAWEDAAKEY 180

Query: 2524 QELLVDMCEQKLAPNLPYVKSLFLGWFEPLRDAIAAEQELCKKGKNRKSYAPNFDLLPAG 2345
            QELL+DMCEQKLAPNLPY+KSLFLGWFEPLRDAIAAEQ+LC +GKNR +YAP FD LPA 
Sbjct: 181  QELLMDMCEQKLAPNLPYIKSLFLGWFEPLRDAIAAEQKLCDEGKNRGAYAPFFDQLPAE 240

Query: 2344 MMAVITXXXXXXXXXXXXXXGSARVVQAACHIGEAIEQEARIHRFLEKTKTKNALNRSSE 2165
            MMAVIT              GSARVVQAA HIGEAIE EARIHRFLEKTK KNAL+ S E
Sbjct: 241  MMAVITMHKLMGLLMTGGGSGSARVVQAASHIGEAIEHEARIHRFLEKTK-KNALDGSLE 299

Query: 2164 EEPDPAVKEQERLRKKVNILMKKQKLHQVRKIVKQQDDLKPWGQDAQVKIGCRLIQILME 1985
            E     +KE+ERLRKKV ILMKKQKL QVRKIVKQQDD KPWGQD  VK+GC+LIQIL+E
Sbjct: 300  ETAGDIMKERERLRKKVKILMKKQKLQQVRKIVKQQDDEKPWGQDNLVKVGCKLIQILIE 359

Query: 1984 TAHIQPPVDQLEDGPPDIRPAFVHSLKTVETQRGSRRYGVIECDPLVRKGLEKTARHMVI 1805
            TA+IQPP DQL+D PPDIRPAF+H+LKTVET +GSRRYGVI+CDPLVRKGL+KTARHMVI
Sbjct: 360  TAYIQPPNDQLDDCPPDIRPAFMHTLKTVETVKGSRRYGVIQCDPLVRKGLDKTARHMVI 419

Query: 1804 PYMPMLVPPLHWTGYDRGAYLFLPSYIMRTHGAKQQREAVKRVPRKQLEPVFEALNTLGN 1625
            PYMPMLVPP +W+GYDRGAYLFLPSYIMRTHGAKQQREAVKRVP+KQLEPVF+AL+TLGN
Sbjct: 420  PYMPMLVPPQNWSGYDRGAYLFLPSYIMRTHGAKQQREAVKRVPKKQLEPVFQALDTLGN 479

Query: 1624 TKWKVNKRILGVVDRIWASGGQLADLVDREDVPLPEEPDTEDXXXXXXXXXXXXXXXXEN 1445
            TKW+VNKR+LG++DRIWASGG+LADLVDREDVPLPEEPDTED                EN
Sbjct: 480  TKWRVNKRVLGILDRIWASGGRLADLVDREDVPLPEEPDTEDEEEIKKWKWKVKAAKKEN 539

Query: 1444 SERHSQRCDIELKLAVSRKMKDEDGFYYPHNLDFRGRAYPMHPYLNHLGSDLCRGILEFA 1265
             ERHSQRCDIELKLAV+RKMKDE+GFYYPHNLDFRGRAYPMHPYLNHLGSDLCRGILEF+
Sbjct: 540  CERHSQRCDIELKLAVARKMKDEEGFYYPHNLDFRGRAYPMHPYLNHLGSDLCRGILEFS 599

Query: 1264 EGRPLGKSGLQWLKIHLANLYGSGVDKLSYKGRIAFAENHLEDIFDSADRPLEGKRWWLG 1085
            EGRPLGKSGL+WLKIHLAN+YG GVDKLSY+GR AF+ENH+EDIFDSADRPLEG+RWWLG
Sbjct: 600  EGRPLGKSGLRWLKIHLANVYGGGVDKLSYEGRAAFSENHVEDIFDSADRPLEGRRWWLG 659

Query: 1084 AEDPFQCLATCMNLSEALRSPSPETTISHMPVHQDGSCNGLQHYAALGRDKLGAAAVNLV 905
            AEDPFQCLATC+N+SEALRSPSPET+ISHMP+HQDGSCNGLQHYAALGRDKLGAAAVNLV
Sbjct: 660  AEDPFQCLATCINISEALRSPSPETSISHMPIHQDGSCNGLQHYAALGRDKLGAAAVNLV 719

Query: 904  AGDKPADVYSGIATRVLDIMKRDAAKDPATDPNVMRARLLINQVDRKLVKQTVMTSVYGV 725
            AGDKPADVYSGIA RVLDIMKRDA KDPATDPNVMRARLLINQVDRKLVKQTVMTSVYGV
Sbjct: 720  AGDKPADVYSGIAARVLDIMKRDADKDPATDPNVMRARLLINQVDRKLVKQTVMTSVYGV 779

Query: 724  TYIGARDQIKKRLKERGAIEDDTELFSAACYAAKTTLTALGEMFEAARSIMSWLGDCAKI 545
            TYIGARDQIK+RLKERGAIEDD ELFSAACYAAKTTLTALGEMFEAARSIMSWLGDCAKI
Sbjct: 780  TYIGARDQIKRRLKERGAIEDDNELFSAACYAAKTTLTALGEMFEAARSIMSWLGDCAKI 839

Query: 544  IALENEPVRWTTPLGLPVVQPYRKLGRHLIKTSLQILTLQRETDKVMVKRQRTAFPPNFV 365
            IA+EN+PVRWTTPLGLPVVQPYRKLGRHLIKTSLQILTLQRETDKVMVKRQRTAFPPNFV
Sbjct: 840  IAMENQPVRWTTPLGLPVVQPYRKLGRHLIKTSLQILTLQRETDKVMVKRQRTAFPPNFV 899

Query: 364  HSLDGSHMMMTAIACKDAGLNFAGVHDSYWTHACDVDQMNNILREKFVELYDAPILENLL 185
            HSLDGSHMMMTAI CK+AGL+FAGVHDSYWTHA DVDQMN ILREKFVELYDAPILENLL
Sbjct: 900  HSLDGSHMMMTAITCKEAGLSFAGVHDSYWTHASDVDQMNKILREKFVELYDAPILENLL 959

Query: 184  ESFQQSFPKLKFPPLPERGDFDLREVLESPYFFN 83
            ESFQQSFP L+FPPLPERGDFDLREVLESPYFFN
Sbjct: 960  ESFQQSFPDLQFPPLPERGDFDLREVLESPYFFN 993


>ref|XP_009627611.1| PREDICTED: DNA-directed RNA polymerase 1B, mitochondrial [Nicotiana
            tomentosiformis]
          Length = 1002

 Score = 1518 bits (3929), Expect = 0.0
 Identities = 774/1009 (76%), Positives = 838/1009 (83%), Gaps = 31/1009 (3%)
 Frame = -2

Query: 3016 MWRNLSKQSSLRKLNYFSESHSSLPVFCSVRSHQDLSFVERSVPLDLKDYVNTQNQELCF 2837
            MWR +SK +  RK   F  SH S  +  S  S    S   ++ PL      +T +  L  
Sbjct: 1    MWRYISKHAYSRK---FRNSHDSALLGFSQYS----SSFGKTRPLQCLCEESTTHPNLGL 53

Query: 2836 SRDYSFWR-----------------NQKIGCHKFAISSEP-----------FGSTWSSRD 2741
            S++  F R                 N  +G  + +I S              GS    R 
Sbjct: 54   SQNSIFSRISRKVRHLEGICEESSKNPHLGLSQNSIFSSVKGDFRICGKRGSGSLGRLRS 113

Query: 2740 YXXXXXXXXXXXXEDVDEIQELVEEMNKE---IQEKGQQKQPKMVGGMGVAKYNMLRRRQ 2570
            Y            ED+DEIQEL+EEM+KE   ++   Q KQPK +GGMGV KYN+LRRRQ
Sbjct: 114  YGSAAEAIVSTSEEDIDEIQELIEEMDKENEALKANLQPKQPKTIGGMGVGKYNLLRRRQ 173

Query: 2569 IKLETEAWEEAAKEYQELLVDMCEQKLAPNLPYVKSLFLGWFEPLRDAIAAEQELCKKGK 2390
            IK+ETEAWEEAAKEYQELL+DMCEQKLAPNLPY+KSLFLGWFEPLRDAIAAEQ+LC +GK
Sbjct: 174  IKVETEAWEEAAKEYQELLMDMCEQKLAPNLPYMKSLFLGWFEPLRDAIAAEQKLCDEGK 233

Query: 2389 NRKSYAPNFDLLPAGMMAVITXXXXXXXXXXXXXXGSARVVQAACHIGEAIEQEARIHRF 2210
            NR +YAP FD LPA MMAVIT              GSARVVQAA +IGEAIE EARIHRF
Sbjct: 234  NRGAYAPFFDQLPAEMMAVITMHKLMGLLMTGGGTGSARVVQAASYIGEAIEHEARIHRF 293

Query: 2209 LEKTKTKNALNRSSEEEPDPAVKEQERLRKKVNILMKKQKLHQVRKIVKQQDDLKPWGQD 2030
            LEKTK  NAL+   EE P   +KE+ERLRKKV  LMKKQKL QVRKIVKQQDD KPWGQD
Sbjct: 294  LEKTKKSNALSGDLEETPGDMMKERERLRKKVKFLMKKQKLQQVRKIVKQQDDEKPWGQD 353

Query: 2029 AQVKIGCRLIQILMETAHIQPPVDQLEDGPPDIRPAFVHSLKTVETQRGSRRYGVIECDP 1850
              VK+GCRLIQILMETA+IQPP DQL+DGPPDIRPAFVH+LKTVET +GSRRYGVI+CDP
Sbjct: 354  NLVKVGCRLIQILMETAYIQPPNDQLDDGPPDIRPAFVHTLKTVETMKGSRRYGVIQCDP 413

Query: 1849 LVRKGLEKTARHMVIPYMPMLVPPLHWTGYDRGAYLFLPSYIMRTHGAKQQREAVKRVPR 1670
            LVRKGL+KTARHMVIPYMPMLVPP  W GYD+G YLFLPSYIMRTHGAKQQREAVKRVP+
Sbjct: 414  LVRKGLDKTARHMVIPYMPMLVPPQSWLGYDKGGYLFLPSYIMRTHGAKQQREAVKRVPK 473

Query: 1669 KQLEPVFEALNTLGNTKWKVNKRILGVVDRIWASGGQLADLVDREDVPLPEEPDTEDXXX 1490
            KQLEPVF+AL+TLGNTKW+VN+++LG+VDRIWASGG+LADLVDREDVPLPE PDTED   
Sbjct: 474  KQLEPVFQALDTLGNTKWRVNRKVLGIVDRIWASGGRLADLVDREDVPLPEAPDTEDEAE 533

Query: 1489 XXXXXXXXXXXXXENSERHSQRCDIELKLAVSRKMKDEDGFYYPHNLDFRGRAYPMHPYL 1310
                         EN ERHSQRCDIELKLAV+RKMKDEDGFYYPHNLDFRGRAYPMHPYL
Sbjct: 534  IRKWKWKVKGVKKENCERHSQRCDIELKLAVARKMKDEDGFYYPHNLDFRGRAYPMHPYL 593

Query: 1309 NHLGSDLCRGILEFAEGRPLGKSGLQWLKIHLANLYGSGVDKLSYKGRIAFAENHLEDIF 1130
            NHLGSDLCRGILEFAEGRPLG SGL+WLKIHLAN+YG GVDKLSY+GR+AF+ENHLEDIF
Sbjct: 594  NHLGSDLCRGILEFAEGRPLGTSGLRWLKIHLANVYGGGVDKLSYEGRVAFSENHLEDIF 653

Query: 1129 DSADRPLEGKRWWLGAEDPFQCLATCMNLSEALRSPSPETTISHMPVHQDGSCNGLQHYA 950
            DSA+RPLEGKRWWLGAEDPFQCLATC+N++EALRSPSPET IS+MP+HQDGSCNGLQHYA
Sbjct: 654  DSAERPLEGKRWWLGAEDPFQCLATCINIAEALRSPSPETAISYMPIHQDGSCNGLQHYA 713

Query: 949  ALGRDKLGAAAVNLVAGDKPADVYSGIATRVLDIMKRDAAKDPATDPNVMRARLLINQVD 770
            ALGRDKLGAAAVNLVAGDKPADVYSGIA RVLDIMKRDAAKDPA DPNVMRARLLINQVD
Sbjct: 714  ALGRDKLGAAAVNLVAGDKPADVYSGIAARVLDIMKRDAAKDPANDPNVMRARLLINQVD 773

Query: 769  RKLVKQTVMTSVYGVTYIGARDQIKKRLKERGAIEDDTELFSAACYAAKTTLTALGEMFE 590
            RKLVKQTVMTSVYGVTYIGARDQIKKRLKERG IEDD ELF+AACYAAKTTLTALGEMFE
Sbjct: 774  RKLVKQTVMTSVYGVTYIGARDQIKKRLKERGVIEDDNELFAAACYAAKTTLTALGEMFE 833

Query: 589  AARSIMSWLGDCAKIIALENEPVRWTTPLGLPVVQPYRKLGRHLIKTSLQILTLQRETDK 410
            AARSIMSWLGDCAKIIA+EN PVRWTTPLGLPVVQPYRKLGRHLIKTSLQILTLQRETDK
Sbjct: 834  AARSIMSWLGDCAKIIAMENHPVRWTTPLGLPVVQPYRKLGRHLIKTSLQILTLQRETDK 893

Query: 409  VMVKRQRTAFPPNFVHSLDGSHMMMTAIACKDAGLNFAGVHDSYWTHACDVDQMNNILRE 230
            VMVKRQRTAFPPNFVHSLDGSHMMMTAIACK++GL+FAGVHDSYWTHACDVDQMN ILRE
Sbjct: 894  VMVKRQRTAFPPNFVHSLDGSHMMMTAIACKESGLSFAGVHDSYWTHACDVDQMNKILRE 953

Query: 229  KFVELYDAPILENLLESFQQSFPKLKFPPLPERGDFDLREVLESPYFFN 83
            KFVELYDAPILENLLESFQQSFP L+FPPLPERGDFDLREVLESPYFFN
Sbjct: 954  KFVELYDAPILENLLESFQQSFPDLQFPPLPERGDFDLREVLESPYFFN 1002


>emb|CAC82574.2| phage-type RNA polymerase [Nicotiana tabacum]
          Length = 1002

 Score = 1517 bits (3927), Expect = 0.0
 Identities = 775/1009 (76%), Positives = 838/1009 (83%), Gaps = 31/1009 (3%)
 Frame = -2

Query: 3016 MWRNLSKQSSLRKLNYFSESHSSLPVFCSVRSHQDLSFVERSVPLDLKDYVNTQNQELCF 2837
            MWR +SK +  RK   F  SH S  +  S  S    S   ++ PL      +T +  L  
Sbjct: 1    MWRYISKHAYSRK---FRNSHDSALLGFSQYS----SSFGKTRPLQCLCEESTTHPNLGL 53

Query: 2836 SRDYSFWRNQKIGCHKFAISSEPF---------GSTWSS-------------------RD 2741
            S++  F R  +   H   I  E            ST+SS                   R 
Sbjct: 54   SQNSIFSRISRKVRHLEGICEESSKNPHLGLSQNSTFSSVKGDFRICGKRGSGSLGRLRS 113

Query: 2740 YXXXXXXXXXXXXEDVDEIQELVEEMNKE---IQEKGQQKQPKMVGGMGVAKYNMLRRRQ 2570
            Y            ED+DEIQEL+EEM+KE   ++   Q KQPK +GGMGV KYN LRRRQ
Sbjct: 114  YGSAAEAIVSTSEEDIDEIQELIEEMDKENEALKANLQPKQPKTIGGMGVGKYNFLRRRQ 173

Query: 2569 IKLETEAWEEAAKEYQELLVDMCEQKLAPNLPYVKSLFLGWFEPLRDAIAAEQELCKKGK 2390
            IK+ETEAWEEAAKEYQELL+DMCEQKLAPNLPY+KSLFLGWFEPLRDAIAAEQ+LC +GK
Sbjct: 174  IKVETEAWEEAAKEYQELLMDMCEQKLAPNLPYMKSLFLGWFEPLRDAIAAEQKLCDEGK 233

Query: 2389 NRKSYAPNFDLLPAGMMAVITXXXXXXXXXXXXXXGSARVVQAACHIGEAIEQEARIHRF 2210
            NR +YAP FD LPA MMAVIT              GSARVVQAA +IGEAIE EARIHRF
Sbjct: 234  NRGAYAPFFDQLPAEMMAVITMHKLMGLLMTGGGTGSARVVQAASYIGEAIEHEARIHRF 293

Query: 2209 LEKTKTKNALNRSSEEEPDPAVKEQERLRKKVNILMKKQKLHQVRKIVKQQDDLKPWGQD 2030
            LEKTK  NAL+   EE P   +KE+ERLRKKV ILMKKQKL QVRKIVKQQDD KPWGQD
Sbjct: 294  LEKTKKSNALSGDLEETPGDMMKERERLRKKVKILMKKQKLRQVRKIVKQQDDEKPWGQD 353

Query: 2029 AQVKIGCRLIQILMETAHIQPPVDQLEDGPPDIRPAFVHSLKTVETQRGSRRYGVIECDP 1850
              VK+GCRLIQILMETA+IQPP DQL+DGPPDIRPAFVH+LKTVET +GSRRYGVI+CDP
Sbjct: 354  NLVKVGCRLIQILMETAYIQPPNDQLDDGPPDIRPAFVHTLKTVETMKGSRRYGVIQCDP 413

Query: 1849 LVRKGLEKTARHMVIPYMPMLVPPLHWTGYDRGAYLFLPSYIMRTHGAKQQREAVKRVPR 1670
            LVRKGL+KTARHMVIPYMPMLVPP  W GYD+G YLFLPSYIMRTHGAKQQREAVKRVP+
Sbjct: 414  LVRKGLDKTARHMVIPYMPMLVPPQSWLGYDKGGYLFLPSYIMRTHGAKQQREAVKRVPK 473

Query: 1669 KQLEPVFEALNTLGNTKWKVNKRILGVVDRIWASGGQLADLVDREDVPLPEEPDTEDXXX 1490
            KQLEPVF+AL+TLGNTKW+VN+++LG+V+RIWASGG+LADLVDREDVPLPE PDTED   
Sbjct: 474  KQLEPVFQALDTLGNTKWRVNRKVLGIVNRIWASGGRLADLVDREDVPLPEAPDTEDEAE 533

Query: 1489 XXXXXXXXXXXXXENSERHSQRCDIELKLAVSRKMKDEDGFYYPHNLDFRGRAYPMHPYL 1310
                         EN ERHSQRCDIELKLAV+RKMKDEDGFYYPHNLDFRGRAYPMHPYL
Sbjct: 534  IRKWKWKVKGVKKENCERHSQRCDIELKLAVARKMKDEDGFYYPHNLDFRGRAYPMHPYL 593

Query: 1309 NHLGSDLCRGILEFAEGRPLGKSGLQWLKIHLANLYGSGVDKLSYKGRIAFAENHLEDIF 1130
            NHLGSDLCRGILEFAEGRPLG SGL+WLKIHLAN+YG GVDKLSY+GR+AF+ENHLEDIF
Sbjct: 594  NHLGSDLCRGILEFAEGRPLGTSGLRWLKIHLANVYGGGVDKLSYEGRVAFSENHLEDIF 653

Query: 1129 DSADRPLEGKRWWLGAEDPFQCLATCMNLSEALRSPSPETTISHMPVHQDGSCNGLQHYA 950
            DSA+RPLEGKRWWLGAEDPFQCLATC+N++EALRSPSPET IS+MP+HQDGSCNGLQHYA
Sbjct: 654  DSAERPLEGKRWWLGAEDPFQCLATCINIAEALRSPSPETAISYMPIHQDGSCNGLQHYA 713

Query: 949  ALGRDKLGAAAVNLVAGDKPADVYSGIATRVLDIMKRDAAKDPATDPNVMRARLLINQVD 770
            ALGRDKLGAAAVNLVAGDKPADVYSGIA RVLDIMKRDAAKDPA DPNVMRARLLINQVD
Sbjct: 714  ALGRDKLGAAAVNLVAGDKPADVYSGIAARVLDIMKRDAAKDPANDPNVMRARLLINQVD 773

Query: 769  RKLVKQTVMTSVYGVTYIGARDQIKKRLKERGAIEDDTELFSAACYAAKTTLTALGEMFE 590
            RKLVKQTVMTSVYGVTYIGARDQIKKRLKERG IEDD ELF+AACYAAKTTLTALGEMFE
Sbjct: 774  RKLVKQTVMTSVYGVTYIGARDQIKKRLKERGVIEDDNELFAAACYAAKTTLTALGEMFE 833

Query: 589  AARSIMSWLGDCAKIIALENEPVRWTTPLGLPVVQPYRKLGRHLIKTSLQILTLQRETDK 410
            AARSIMSWLGDCAKIIA+EN PVRWTTPLGLPVVQPYRKLGRHLIKTSLQILTLQRETDK
Sbjct: 834  AARSIMSWLGDCAKIIAMENHPVRWTTPLGLPVVQPYRKLGRHLIKTSLQILTLQRETDK 893

Query: 409  VMVKRQRTAFPPNFVHSLDGSHMMMTAIACKDAGLNFAGVHDSYWTHACDVDQMNNILRE 230
            VMVKRQRTAFPPNFVHSLDGSHMMMTAIACK++GL+FAGVHDSYWTHACDVDQMN ILRE
Sbjct: 894  VMVKRQRTAFPPNFVHSLDGSHMMMTAIACKESGLSFAGVHDSYWTHACDVDQMNKILRE 953

Query: 229  KFVELYDAPILENLLESFQQSFPKLKFPPLPERGDFDLREVLESPYFFN 83
            KFVELYDAPILENLLESFQQSFP L+FPPLPERGDFDLREVLESPYFFN
Sbjct: 954  KFVELYDAPILENLLESFQQSFPDLQFPPLPERGDFDLREVLESPYFFN 1002


>sp|Q93Y94.1|RPOT1_NICSY RecName: Full=DNA-directed RNA polymerase 1, mitochondrial; AltName:
            Full=NsRpoT-A; AltName: Full=T7 bacteriophage-type single
            subunit RNA polymerase 1; Flags: Precursor [Nicotiana
            sylvestris] gi|15824083|dbj|BAB69431.1| T7
            bacteriophage-type single subunit RNA polymerase
            [Nicotiana sylvestris]
          Length = 1002

 Score = 1515 bits (3922), Expect = 0.0
 Identities = 772/1009 (76%), Positives = 836/1009 (82%), Gaps = 31/1009 (3%)
 Frame = -2

Query: 3016 MWRNLSKQSSLRKLNYFSESHSSLPVFCSVRSHQDLSFVERSVPLDLKDYVNTQNQELCF 2837
            MWR +SKQ+  RK   F  SH S  +  S  S    S   ++ PL      +T N  L  
Sbjct: 1    MWRYISKQAYSRK---FRNSHDSALLGFSQYS----SSFGKTRPLQCLCEESTTNPNLGL 53

Query: 2836 SRDYSFWRNQKIGCHKFAISSEPF----------------------------GSTWSSRD 2741
            S++  F R  +   H   I  E                              GS    R 
Sbjct: 54   SQNSIFSRISRKVRHLEGICEESSKNPHLGLSQNSLFSSVKGDFRVCGKRGSGSLGFLRS 113

Query: 2740 YXXXXXXXXXXXXEDVDEIQELVEEMNKE---IQEKGQQKQPKMVGGMGVAKYNMLRRRQ 2570
            Y            ED+DEIQEL+EEMNKE   ++   Q KQPK +GGMGV KYN+LRRRQ
Sbjct: 114  YGSAAEAIASTSEEDIDEIQELIEEMNKENEALKTNLQPKQPKTIGGMGVGKYNLLRRRQ 173

Query: 2569 IKLETEAWEEAAKEYQELLVDMCEQKLAPNLPYVKSLFLGWFEPLRDAIAAEQELCKKGK 2390
            IK+ETEAWEEAAKEYQELL+DMCEQKLAPNLPY+KSLFLGWFEPLRDAIAAEQ+LC +GK
Sbjct: 174  IKVETEAWEEAAKEYQELLMDMCEQKLAPNLPYMKSLFLGWFEPLRDAIAAEQKLCDEGK 233

Query: 2389 NRKSYAPNFDLLPAGMMAVITXXXXXXXXXXXXXXGSARVVQAACHIGEAIEQEARIHRF 2210
            NR +YAP FD LPA MMAVIT              GSARVVQAA HIGEAIE EARIHRF
Sbjct: 234  NRGAYAPFFDQLPAEMMAVITMHKLMGLLMTGGGTGSARVVQAASHIGEAIEHEARIHRF 293

Query: 2209 LEKTKTKNALNRSSEEEPDPAVKEQERLRKKVNILMKKQKLHQVRKIVKQQDDLKPWGQD 2030
            LEKTK  NAL+   E+ P   +KE+ER+RKKV ILMKKQKL QVRKIVKQQDD KPWGQD
Sbjct: 294  LEKTKKSNALSGDLEDTPGDIMKERERVRKKVKILMKKQKLQQVRKIVKQQDDEKPWGQD 353

Query: 2029 AQVKIGCRLIQILMETAHIQPPVDQLEDGPPDIRPAFVHSLKTVETQRGSRRYGVIECDP 1850
              VK+GCRLIQILMETA+IQPP DQL+D PPDIRPAFVH+LKTVET +GSRRYGVI+CDP
Sbjct: 354  NLVKVGCRLIQILMETAYIQPPNDQLDDCPPDIRPAFVHTLKTVETMKGSRRYGVIQCDP 413

Query: 1849 LVRKGLEKTARHMVIPYMPMLVPPLHWTGYDRGAYLFLPSYIMRTHGAKQQREAVKRVPR 1670
            LVRKGL+KTARHMVIPYMPMLVPP  W GYD+GAYLFLPSYIMRTHGAKQQREAVKRVP+
Sbjct: 414  LVRKGLDKTARHMVIPYMPMLVPPQSWLGYDKGAYLFLPSYIMRTHGAKQQREAVKRVPK 473

Query: 1669 KQLEPVFEALNTLGNTKWKVNKRILGVVDRIWASGGQLADLVDREDVPLPEEPDTEDXXX 1490
            KQLEPVF+AL+TLGNTKW++N+++LG+VDRIWASGG+LADLVDREDVPLPEEPD ED   
Sbjct: 474  KQLEPVFQALDTLGNTKWRLNRKVLGIVDRIWASGGRLADLVDREDVPLPEEPDAEDEAQ 533

Query: 1489 XXXXXXXXXXXXXENSERHSQRCDIELKLAVSRKMKDEDGFYYPHNLDFRGRAYPMHPYL 1310
                         EN ERHSQRCDIELKLAV+RKMKDEDGFYYPHNLDFRGRAYPMHPYL
Sbjct: 534  IRKWKWKVKGVKKENCERHSQRCDIELKLAVARKMKDEDGFYYPHNLDFRGRAYPMHPYL 593

Query: 1309 NHLGSDLCRGILEFAEGRPLGKSGLQWLKIHLANLYGSGVDKLSYKGRIAFAENHLEDIF 1130
            NHLGSDLCRGILEFAEGRPLGKSGL+WLKIHLAN+YG GVDKLSY+GR+AF+ENH+EDIF
Sbjct: 594  NHLGSDLCRGILEFAEGRPLGKSGLRWLKIHLANVYGGGVDKLSYEGRVAFSENHVEDIF 653

Query: 1129 DSADRPLEGKRWWLGAEDPFQCLATCMNLSEALRSPSPETTISHMPVHQDGSCNGLQHYA 950
            DSA+RPLEGKRWWLGAEDPFQCLATC+N++EALRSPSPET IS+MP+HQDGSCNGLQHYA
Sbjct: 654  DSAERPLEGKRWWLGAEDPFQCLATCINIAEALRSPSPETAISYMPIHQDGSCNGLQHYA 713

Query: 949  ALGRDKLGAAAVNLVAGDKPADVYSGIATRVLDIMKRDAAKDPATDPNVMRARLLINQVD 770
            ALGRD LGAAAVNLVAGDKPADVYSGIA RVLDIMKRDAAKDPA DPNVMRARLLINQVD
Sbjct: 714  ALGRDTLGAAAVNLVAGDKPADVYSGIAARVLDIMKRDAAKDPANDPNVMRARLLINQVD 773

Query: 769  RKLVKQTVMTSVYGVTYIGARDQIKKRLKERGAIEDDTELFSAACYAAKTTLTALGEMFE 590
            RKLVKQTVMTSVYGVTYIGARDQIK+RLKERG IEDD ELF+AACYAAKTTLTALGEMFE
Sbjct: 774  RKLVKQTVMTSVYGVTYIGARDQIKRRLKERGVIEDDNELFAAACYAAKTTLTALGEMFE 833

Query: 589  AARSIMSWLGDCAKIIALENEPVRWTTPLGLPVVQPYRKLGRHLIKTSLQILTLQRETDK 410
            AARSIMSWLGDCAKIIA+EN PVRWTTPLGLPVVQPYRKLGRHLIKTSLQILTLQRETDK
Sbjct: 834  AARSIMSWLGDCAKIIAMENHPVRWTTPLGLPVVQPYRKLGRHLIKTSLQILTLQRETDK 893

Query: 409  VMVKRQRTAFPPNFVHSLDGSHMMMTAIACKDAGLNFAGVHDSYWTHACDVDQMNNILRE 230
            VMVKRQRTAFPPNFVHSLDGSHMMMTAIACK++GL+FAGVHDSYWTHA DVDQMN ILRE
Sbjct: 894  VMVKRQRTAFPPNFVHSLDGSHMMMTAIACKESGLSFAGVHDSYWTHASDVDQMNKILRE 953

Query: 229  KFVELYDAPILENLLESFQQSFPKLKFPPLPERGDFDLREVLESPYFFN 83
            KFVELYDAPILENLLESFQQSFP L+FPPLPERGDFDLREVLESPYFFN
Sbjct: 954  KFVELYDAPILENLLESFQQSFPDLQFPPLPERGDFDLREVLESPYFFN 1002


>ref|NP_001289502.1| DNA-directed RNA polymerase 1, mitochondrial [Nicotiana sylvestris]
            gi|21425663|emb|CAC95019.1| mitochondrial RNA polymerase
            [Nicotiana sylvestris]
          Length = 1002

 Score = 1514 bits (3920), Expect = 0.0
 Identities = 772/1009 (76%), Positives = 835/1009 (82%), Gaps = 31/1009 (3%)
 Frame = -2

Query: 3016 MWRNLSKQSSLRKLNYFSESHSSLPVFCSVRSHQDLSFVERSVPLDLKDYVNTQNQELCF 2837
            MWR +SK +  RK   F  SH S  +  S  S    S   ++ PL      +T N  L  
Sbjct: 1    MWRYISKHAYSRK---FRNSHDSALLGFSQYS----SSFGKTRPLQCLCEESTTNPNLGL 53

Query: 2836 SRDYSFWRNQKIGCHKFAISSEPF----------------------------GSTWSSRD 2741
            S++  F R  +   H   I  E                              GS    R 
Sbjct: 54   SQNSIFSRISRKVRHLEGICEESSKNPHLGLSQNSLFSSVKGDFRVCGKRGSGSLGFLRS 113

Query: 2740 YXXXXXXXXXXXXEDVDEIQELVEEMNKE---IQEKGQQKQPKMVGGMGVAKYNMLRRRQ 2570
            Y            ED+DEIQEL+EEMNKE   ++   Q KQPK +GGMGV KYN+LRRRQ
Sbjct: 114  YGSAAEAIASTSEEDIDEIQELIEEMNKENEALKTNLQPKQPKTIGGMGVGKYNLLRRRQ 173

Query: 2569 IKLETEAWEEAAKEYQELLVDMCEQKLAPNLPYVKSLFLGWFEPLRDAIAAEQELCKKGK 2390
            IK+ETEAWEEAAKEYQELL+DMCEQKLAPNLPY+KSLFLGWFEPLRDAIAAEQ+LC +GK
Sbjct: 174  IKVETEAWEEAAKEYQELLMDMCEQKLAPNLPYMKSLFLGWFEPLRDAIAAEQKLCDEGK 233

Query: 2389 NRKSYAPNFDLLPAGMMAVITXXXXXXXXXXXXXXGSARVVQAACHIGEAIEQEARIHRF 2210
            NR +YAP FD LPA MMAVIT              GSARVVQAA HIGEAIE EARIHRF
Sbjct: 234  NRGAYAPFFDQLPAEMMAVITMHKLMGLLMTGGGTGSARVVQAASHIGEAIEHEARIHRF 293

Query: 2209 LEKTKTKNALNRSSEEEPDPAVKEQERLRKKVNILMKKQKLHQVRKIVKQQDDLKPWGQD 2030
            LEKTK  NAL+   E+ P   +KE+ERLRKKV ILMKKQKL QVRKIVKQQDD KPWGQD
Sbjct: 294  LEKTKKSNALSGDLEDTPGDIMKERERLRKKVKILMKKQKLQQVRKIVKQQDDEKPWGQD 353

Query: 2029 AQVKIGCRLIQILMETAHIQPPVDQLEDGPPDIRPAFVHSLKTVETQRGSRRYGVIECDP 1850
              VK+GCRLIQILMETA+IQPP DQL+D PPDIRPAFVH+LKTVET +GSRRYGVI+CDP
Sbjct: 354  NLVKVGCRLIQILMETAYIQPPNDQLDDCPPDIRPAFVHTLKTVETMKGSRRYGVIQCDP 413

Query: 1849 LVRKGLEKTARHMVIPYMPMLVPPLHWTGYDRGAYLFLPSYIMRTHGAKQQREAVKRVPR 1670
            LVRKGL+KTARHMVIPYMPMLVPP  W GYD+GAYLFLPSYIMRTHGAKQQREAVKRVP+
Sbjct: 414  LVRKGLDKTARHMVIPYMPMLVPPQSWLGYDKGAYLFLPSYIMRTHGAKQQREAVKRVPK 473

Query: 1669 KQLEPVFEALNTLGNTKWKVNKRILGVVDRIWASGGQLADLVDREDVPLPEEPDTEDXXX 1490
            KQLEPVF+AL+TLGNTKW++N+++LG+VDRIWASGG+LADLVDREDVPLPEEPD ED   
Sbjct: 474  KQLEPVFQALDTLGNTKWRLNRKVLGIVDRIWASGGRLADLVDREDVPLPEEPDAEDEAQ 533

Query: 1489 XXXXXXXXXXXXXENSERHSQRCDIELKLAVSRKMKDEDGFYYPHNLDFRGRAYPMHPYL 1310
                         EN ERHSQRCDIELKLAV+RKMKDEDGFYYPHNLDFRGRAYPMHPYL
Sbjct: 534  IRKWKWKVKGVKKENCERHSQRCDIELKLAVARKMKDEDGFYYPHNLDFRGRAYPMHPYL 593

Query: 1309 NHLGSDLCRGILEFAEGRPLGKSGLQWLKIHLANLYGSGVDKLSYKGRIAFAENHLEDIF 1130
            NHLGSDLCRGILEFAEGRPLGKSGL+WLKIHLAN+YG GVDKLSY+GR+AF+ENH+EDIF
Sbjct: 594  NHLGSDLCRGILEFAEGRPLGKSGLRWLKIHLANVYGGGVDKLSYEGRVAFSENHVEDIF 653

Query: 1129 DSADRPLEGKRWWLGAEDPFQCLATCMNLSEALRSPSPETTISHMPVHQDGSCNGLQHYA 950
            DSA+RPLEGKRWWLGAEDPFQCLATC+N++EALRSPSPET IS+MP+HQDGSCNGLQHYA
Sbjct: 654  DSAERPLEGKRWWLGAEDPFQCLATCINIAEALRSPSPETAISYMPIHQDGSCNGLQHYA 713

Query: 949  ALGRDKLGAAAVNLVAGDKPADVYSGIATRVLDIMKRDAAKDPATDPNVMRARLLINQVD 770
            ALGRD LGAAAVNLVAGDKPADVYSGIA RVLDIMKRDAAKDPA DPNVMRARLLINQVD
Sbjct: 714  ALGRDTLGAAAVNLVAGDKPADVYSGIAARVLDIMKRDAAKDPANDPNVMRARLLINQVD 773

Query: 769  RKLVKQTVMTSVYGVTYIGARDQIKKRLKERGAIEDDTELFSAACYAAKTTLTALGEMFE 590
            RKLVKQTVMTSVYGVTYIGARDQIK+RLKERG IEDD ELF+AACYAAKTTLTALGEMFE
Sbjct: 774  RKLVKQTVMTSVYGVTYIGARDQIKRRLKERGVIEDDNELFAAACYAAKTTLTALGEMFE 833

Query: 589  AARSIMSWLGDCAKIIALENEPVRWTTPLGLPVVQPYRKLGRHLIKTSLQILTLQRETDK 410
            AARSIMSWLGDCAKIIA+EN PVRWTTPLGLPVVQPYRKLGRHLIKTSLQILTLQRETDK
Sbjct: 834  AARSIMSWLGDCAKIIAMENHPVRWTTPLGLPVVQPYRKLGRHLIKTSLQILTLQRETDK 893

Query: 409  VMVKRQRTAFPPNFVHSLDGSHMMMTAIACKDAGLNFAGVHDSYWTHACDVDQMNNILRE 230
            VMVKRQRTAFPPNFVHSLDGSHMMMTAIACK++GL+FAGVHDSYWTHA DVDQMN ILRE
Sbjct: 894  VMVKRQRTAFPPNFVHSLDGSHMMMTAIACKESGLSFAGVHDSYWTHASDVDQMNKILRE 953

Query: 229  KFVELYDAPILENLLESFQQSFPKLKFPPLPERGDFDLREVLESPYFFN 83
            KFVELYDAPILENLLESFQQSFP L+FPPLPERGDFDLREVLESPYFFN
Sbjct: 954  KFVELYDAPILENLLESFQQSFPDLQFPPLPERGDFDLREVLESPYFFN 1002


>dbj|BAB69063.1| T7 bacteriophage-type single subunit RNA polymerase [Nicotiana
            sylvestris]
          Length = 1002

 Score = 1510 bits (3910), Expect = 0.0
 Identities = 771/1009 (76%), Positives = 834/1009 (82%), Gaps = 31/1009 (3%)
 Frame = -2

Query: 3016 MWRNLSKQSSLRKLNYFSESHSSLPVFCSVRSHQDLSFVERSVPLDLKDYVNTQNQELCF 2837
            MWR +SKQ+  RK   F  SH S  +  S  S    S   ++ PL      +T N  L  
Sbjct: 1    MWRYISKQAYSRK---FRNSHDSALLGFSQYS----SSFGKTRPLQCLCEESTTNPNLGL 53

Query: 2836 SRDYSFWRNQKIGCHKFAISSEPF----------------------------GSTWSSRD 2741
            S++  F R  +   H   I  E                              GS    R 
Sbjct: 54   SQNSIFSRISRKVRHLEGICEESSKNPHLGLSQNSLFSSVKGDFRVCGKRGSGSLGFLRS 113

Query: 2740 YXXXXXXXXXXXXEDVDEIQELVEEMNKE---IQEKGQQKQPKMVGGMGVAKYNMLRRRQ 2570
            Y            ED DEIQEL+EEMNKE   ++   Q KQPK +GGMGV KYN+LRRRQ
Sbjct: 114  YGSAAEAIASTSEEDTDEIQELIEEMNKENEALKTNLQPKQPKTIGGMGVGKYNLLRRRQ 173

Query: 2569 IKLETEAWEEAAKEYQELLVDMCEQKLAPNLPYVKSLFLGWFEPLRDAIAAEQELCKKGK 2390
            IK+ETEAWEEAAKEYQELL+DMCEQKLAPNLPY+KSLFLGWFEPLRDAIAAEQ+LC +GK
Sbjct: 174  IKVETEAWEEAAKEYQELLMDMCEQKLAPNLPYMKSLFLGWFEPLRDAIAAEQKLCDEGK 233

Query: 2389 NRKSYAPNFDLLPAGMMAVITXXXXXXXXXXXXXXGSARVVQAACHIGEAIEQEARIHRF 2210
            NR + AP FD LPA MMAVIT              GSARVVQAA HIGEAIE EARIHRF
Sbjct: 234  NRGACAPFFDQLPAEMMAVITMHKLMGWLMTGGGTGSARVVQAASHIGEAIEHEARIHRF 293

Query: 2209 LEKTKTKNALNRSSEEEPDPAVKEQERLRKKVNILMKKQKLHQVRKIVKQQDDLKPWGQD 2030
            LEKTK  NAL+   E+ P   +KE+ER+RKKV ILMKKQKL QVRKIVKQQDD KPWGQD
Sbjct: 294  LEKTKKSNALSGDLEDTPGDIMKERERVRKKVKILMKKQKLQQVRKIVKQQDDEKPWGQD 353

Query: 2029 AQVKIGCRLIQILMETAHIQPPVDQLEDGPPDIRPAFVHSLKTVETQRGSRRYGVIECDP 1850
              VK+GCRLIQILMETA+IQPP DQL+D PPDIRPAFVH+LKTVET +GSRRYGVI+CDP
Sbjct: 354  NLVKVGCRLIQILMETAYIQPPNDQLDDCPPDIRPAFVHTLKTVETMKGSRRYGVIQCDP 413

Query: 1849 LVRKGLEKTARHMVIPYMPMLVPPLHWTGYDRGAYLFLPSYIMRTHGAKQQREAVKRVPR 1670
            LVRKGL+KTARHMVIPYMPMLVPP  W GYD+GAYLFLPSYIMRTHGAKQQREAVKRVP+
Sbjct: 414  LVRKGLDKTARHMVIPYMPMLVPPQSWLGYDKGAYLFLPSYIMRTHGAKQQREAVKRVPK 473

Query: 1669 KQLEPVFEALNTLGNTKWKVNKRILGVVDRIWASGGQLADLVDREDVPLPEEPDTEDXXX 1490
            KQLEPVF+AL+TLGNTKW++N+++LG+VDRIWASGG+LADLVDREDVPLPEEPD ED   
Sbjct: 474  KQLEPVFQALDTLGNTKWRLNRKVLGIVDRIWASGGRLADLVDREDVPLPEEPDAEDEAQ 533

Query: 1489 XXXXXXXXXXXXXENSERHSQRCDIELKLAVSRKMKDEDGFYYPHNLDFRGRAYPMHPYL 1310
                         EN ERHSQRCDIELKLAV+RKMKDEDGFYYPHNLDFRGRAYPMHPYL
Sbjct: 534  IRKWKWKVKGVKKENCERHSQRCDIELKLAVARKMKDEDGFYYPHNLDFRGRAYPMHPYL 593

Query: 1309 NHLGSDLCRGILEFAEGRPLGKSGLQWLKIHLANLYGSGVDKLSYKGRIAFAENHLEDIF 1130
            NHLGSDLCRGILEFAEGRPLGKSGL+WLKIHLAN+YG GVDKLSY+GR+AF+ENH+EDIF
Sbjct: 594  NHLGSDLCRGILEFAEGRPLGKSGLRWLKIHLANVYGGGVDKLSYEGRVAFSENHVEDIF 653

Query: 1129 DSADRPLEGKRWWLGAEDPFQCLATCMNLSEALRSPSPETTISHMPVHQDGSCNGLQHYA 950
            DSA+RPLEGKRWWLGAEDPFQCLATC+N++EALRSPSPET IS+MP+HQDGSCNGLQHYA
Sbjct: 654  DSAERPLEGKRWWLGAEDPFQCLATCINIAEALRSPSPETAISYMPIHQDGSCNGLQHYA 713

Query: 949  ALGRDKLGAAAVNLVAGDKPADVYSGIATRVLDIMKRDAAKDPATDPNVMRARLLINQVD 770
            ALGRD LGAAAVNLVAGDKPADVYSGIA RVLDIMKRDAAKDPA DPNVMRARLLINQVD
Sbjct: 714  ALGRDTLGAAAVNLVAGDKPADVYSGIAARVLDIMKRDAAKDPANDPNVMRARLLINQVD 773

Query: 769  RKLVKQTVMTSVYGVTYIGARDQIKKRLKERGAIEDDTELFSAACYAAKTTLTALGEMFE 590
            RKLVKQTVMTSVYGVTYIGARDQIK+RLKERG IEDD ELF+AACYAAKTTLTALGEMFE
Sbjct: 774  RKLVKQTVMTSVYGVTYIGARDQIKRRLKERGVIEDDNELFAAACYAAKTTLTALGEMFE 833

Query: 589  AARSIMSWLGDCAKIIALENEPVRWTTPLGLPVVQPYRKLGRHLIKTSLQILTLQRETDK 410
            AARSIMSWLGDCAKIIA+EN PVRWTTPLGLPVVQPYRKLGRHLIKTSLQILTLQRETDK
Sbjct: 834  AARSIMSWLGDCAKIIAMENHPVRWTTPLGLPVVQPYRKLGRHLIKTSLQILTLQRETDK 893

Query: 409  VMVKRQRTAFPPNFVHSLDGSHMMMTAIACKDAGLNFAGVHDSYWTHACDVDQMNNILRE 230
            VMVKRQRTAFPPNFVHSLDGSHMMMTAIACK++GL+FAGVHDSYWTHA DVDQMN ILRE
Sbjct: 894  VMVKRQRTAFPPNFVHSLDGSHMMMTAIACKESGLSFAGVHDSYWTHASDVDQMNKILRE 953

Query: 229  KFVELYDAPILENLLESFQQSFPKLKFPPLPERGDFDLREVLESPYFFN 83
            KFVELYDAPILENLLESFQQSFP L+FPPLPERGDFDLREVLESPYFFN
Sbjct: 954  KFVELYDAPILENLLESFQQSFPDLQFPPLPERGDFDLREVLESPYFFN 1002


>ref|XP_004239009.1| PREDICTED: DNA-directed RNA polymerase 1, mitochondrial [Solanum
            lycopersicum]
          Length = 993

 Score = 1509 bits (3908), Expect = 0.0
 Identities = 749/897 (83%), Positives = 807/897 (89%), Gaps = 3/897 (0%)
 Frame = -2

Query: 2764 GSTWSSRDYXXXXXXXXXXXXEDVDEIQELVEEMNKE---IQEKGQQKQPKMVGGMGVAK 2594
            GS    R Y            ED+DEIQEL+EEMNKE   ++   Q KQPK VGGMG+ K
Sbjct: 98   GSLGVLRSYGSAAEAIASTSEEDIDEIQELIEEMNKENEALKTNLQPKQPKTVGGMGIGK 157

Query: 2593 YNMLRRRQIKLETEAWEEAAKEYQELLVDMCEQKLAPNLPYVKSLFLGWFEPLRDAIAAE 2414
            YN+LRRRQIK+ETEAWE+AAKEYQELL+DMCEQKLAPNLPY+KSLFLGWFEPL+DAIAAE
Sbjct: 158  YNLLRRRQIKVETEAWEDAAKEYQELLMDMCEQKLAPNLPYIKSLFLGWFEPLKDAIAAE 217

Query: 2413 QELCKKGKNRKSYAPNFDLLPAGMMAVITXXXXXXXXXXXXXXGSARVVQAACHIGEAIE 2234
            Q+LC +GKNR +YAP FD LPA MMAVIT              GSARVVQAA HIGEAIE
Sbjct: 218  QKLCDEGKNRGAYAPFFDQLPAEMMAVITMHKLMGLLMTGGGSGSARVVQAASHIGEAIE 277

Query: 2233 QEARIHRFLEKTKTKNALNRSSEEEPDPAVKEQERLRKKVNILMKKQKLHQVRKIVKQQD 2054
             EARIHRFLEKTK KNAL+ S EE     +KE+ERLRKKV ILMKKQKL QVRKIVKQQD
Sbjct: 278  HEARIHRFLEKTK-KNALDGSLEETAGDIMKERERLRKKVKILMKKQKLQQVRKIVKQQD 336

Query: 2053 DLKPWGQDAQVKIGCRLIQILMETAHIQPPVDQLEDGPPDIRPAFVHSLKTVETQRGSRR 1874
            D KPWGQD  VK+GCRLIQIL+ETA+IQPP DQLED PPDIRPAF+H+LKTV+T +GSRR
Sbjct: 337  DEKPWGQDNLVKVGCRLIQILIETAYIQPPNDQLEDCPPDIRPAFMHTLKTVDTVKGSRR 396

Query: 1873 YGVIECDPLVRKGLEKTARHMVIPYMPMLVPPLHWTGYDRGAYLFLPSYIMRTHGAKQQR 1694
            YGVI+CDPLVRKGL+KTARHMVIPYMPMLVPP +W+GYDRGAYLFLPSYIMRTHGAKQQR
Sbjct: 397  YGVIQCDPLVRKGLDKTARHMVIPYMPMLVPPQNWSGYDRGAYLFLPSYIMRTHGAKQQR 456

Query: 1693 EAVKRVPRKQLEPVFEALNTLGNTKWKVNKRILGVVDRIWASGGQLADLVDREDVPLPEE 1514
            EAVKRVP+KQLEPVF+AL+TLGNTKW+VNKR+LG++DRIWASGG+LADLVDREDVPLPEE
Sbjct: 457  EAVKRVPKKQLEPVFQALDTLGNTKWRVNKRVLGILDRIWASGGRLADLVDREDVPLPEE 516

Query: 1513 PDTEDXXXXXXXXXXXXXXXXENSERHSQRCDIELKLAVSRKMKDEDGFYYPHNLDFRGR 1334
            PDTE+                EN ERHSQRCDIELKLAV+RKMKDE+GFYYPHNLDFRGR
Sbjct: 517  PDTENEEEIKKWKWKVKAAKKENCERHSQRCDIELKLAVARKMKDEEGFYYPHNLDFRGR 576

Query: 1333 AYPMHPYLNHLGSDLCRGILEFAEGRPLGKSGLQWLKIHLANLYGSGVDKLSYKGRIAFA 1154
            AYPMHPYLNHLGSDLCRGILEF+EGRPLGKSGL+WLKIHLAN+YG GVDKLS +GR AF+
Sbjct: 577  AYPMHPYLNHLGSDLCRGILEFSEGRPLGKSGLRWLKIHLANVYGGGVDKLSCEGRAAFS 636

Query: 1153 ENHLEDIFDSADRPLEGKRWWLGAEDPFQCLATCMNLSEALRSPSPETTISHMPVHQDGS 974
            ENH+EDIFDSADRPLEG+RWWLGAEDPFQCLATC+++SEALRSPSPET+ISHMP+HQDGS
Sbjct: 637  ENHVEDIFDSADRPLEGRRWWLGAEDPFQCLATCISISEALRSPSPETSISHMPIHQDGS 696

Query: 973  CNGLQHYAALGRDKLGAAAVNLVAGDKPADVYSGIATRVLDIMKRDAAKDPATDPNVMRA 794
            CNGLQHYAALGRDKLGAAAVNLVAGDKPADVYSGIA RVLDIMKRDA KDPATDPNVMRA
Sbjct: 697  CNGLQHYAALGRDKLGAAAVNLVAGDKPADVYSGIAARVLDIMKRDADKDPATDPNVMRA 756

Query: 793  RLLINQVDRKLVKQTVMTSVYGVTYIGARDQIKKRLKERGAIEDDTELFSAACYAAKTTL 614
            RLLINQVDRKLVKQTVMTSVYGVTYIGARDQIK+RLKERGAIEDD ELF+AACYAAKTTL
Sbjct: 757  RLLINQVDRKLVKQTVMTSVYGVTYIGARDQIKRRLKERGAIEDDNELFAAACYAAKTTL 816

Query: 613  TALGEMFEAARSIMSWLGDCAKIIALENEPVRWTTPLGLPVVQPYRKLGRHLIKTSLQIL 434
            TALGEMFEAARSIMSWLGDCAKIIA+EN+PVRWTTPLGLPVVQPYRKLGRHLIKTSLQIL
Sbjct: 817  TALGEMFEAARSIMSWLGDCAKIIAMENQPVRWTTPLGLPVVQPYRKLGRHLIKTSLQIL 876

Query: 433  TLQRETDKVMVKRQRTAFPPNFVHSLDGSHMMMTAIACKDAGLNFAGVHDSYWTHACDVD 254
            TLQRETDKVMVKRQRTAFPPNFVHSLDGSHMMMTAIACK+AGL+FAGVHDSYWTHA DVD
Sbjct: 877  TLQRETDKVMVKRQRTAFPPNFVHSLDGSHMMMTAIACKEAGLSFAGVHDSYWTHASDVD 936

Query: 253  QMNNILREKFVELYDAPILENLLESFQQSFPKLKFPPLPERGDFDLREVLESPYFFN 83
            QMN ILREKFVELYDAPILENLLESFQQSFP L+FPPLPERGDFDLREVLESPYFFN
Sbjct: 937  QMNKILREKFVELYDAPILENLLESFQQSFPDLQFPPLPERGDFDLREVLESPYFFN 993


>ref|XP_002267464.1| PREDICTED: DNA-directed RNA polymerase 1, mitochondrial [Vitis
            vinifera]
          Length = 978

 Score = 1483 bits (3840), Expect = 0.0
 Identities = 740/985 (75%), Positives = 828/985 (84%), Gaps = 7/985 (0%)
 Frame = -2

Query: 3016 MWRNLSKQSSLRKLNYFSESHSSLPVFCSVRSHQDLSFVERSVPLDLKDYVNTQNQELCF 2837
            MWRNL+K +  R+L   S+  S  P  C+ R +    F +++  L+ +D+VN+       
Sbjct: 1    MWRNLAKHAYTRRLQLSSQHSSFSPSNCTSRFY----FPDKARALESQDHVNSLRPVAGL 56

Query: 2836 SR-DYSFWRNQKIGCHKFAISSEP---FGSTWSSRDYXXXXXXXXXXXXED-VDEIQELV 2672
             R     ++  ++G   F ++  P   FG     + Y               VDE+QELV
Sbjct: 57   RRIGVLSFQQDELGRPGFGVTKTPVNFFGLFGYQKGYASAAEAIASEEDMSGVDEVQELV 116

Query: 2671 EEMNKEIQEKGQQKQPKMVGGMGVAKYNMLRRRQIKLETEAWEEAAKEYQELLVDMCEQK 2492
            EE+NK  +    +KQPK++GG+   K+N+LRRRQIK+ETEAWEEAAKEY+ELL DMCEQK
Sbjct: 117  EEVNKGDK---LEKQPKLIGGVAQGKHNVLRRRQIKMETEAWEEAAKEYRELLSDMCEQK 173

Query: 2491 LAPNLPYVKSLFLGWFEPLRDAIAAEQELCKKGKNRKSYAPNFDLLPAGMMAVITXXXXX 2312
            LAPNLPY+KSLFLGWFEPLRD IAAEQ+LCK+GKNR +YAP FD LPA MMAVIT     
Sbjct: 174  LAPNLPYIKSLFLGWFEPLRDVIAAEQDLCKQGKNRAAYAPYFDHLPADMMAVITMHKLM 233

Query: 2311 XXXXXXXXXGSARVVQAACHIGEAIEQEARIHRFLEKTKTKNALNRSSEEEPDPAVKEQE 2132
                     GSARVVQAACHIGEAIE E RI RF+EKTK K+A + + +   +P  KEQE
Sbjct: 234  GLLMTGEGNGSARVVQAACHIGEAIEHEVRIQRFMEKTKKKSASSNNPDGGSNPVTKEQE 293

Query: 2131 RLRKKVNILMKKQKLHQVRKIVKQQDDLKPWGQDAQVKIGCRLIQILMETAHIQPPVDQL 1952
            +LRKKV++LMKKQKL QVR+IVK+QDD KPWGQDA VK+G RLI++L+ETA+IQPP DQL
Sbjct: 294  KLRKKVSMLMKKQKLQQVRQIVKRQDDSKPWGQDANVKVGSRLIELLIETAYIQPPADQL 353

Query: 1951 EDGPPDIRPAFVHSLKTV--ETQRGSRRYGVIECDPLVRKGLEKTARHMVIPYMPMLVPP 1778
             DGPPDIRPAFVH+LKTV  ETQ+G+RRYGVIECDPLVRKGLEKTARHMVIPYMPMLVPP
Sbjct: 354  GDGPPDIRPAFVHTLKTVIKETQKGTRRYGVIECDPLVRKGLEKTARHMVIPYMPMLVPP 413

Query: 1777 LHWTGYDRGAYLFLPSYIMRTHGAKQQREAVKRVPRKQLEPVFEALNTLGNTKWKVNKRI 1598
            L+WTGYD+GAYLFLPSY+MR HGA+QQREA+KR PRK LEP FEALNTLGNTKW++NKR+
Sbjct: 414  LNWTGYDKGAYLFLPSYVMRIHGARQQREAIKRAPRKALEPAFEALNTLGNTKWRINKRV 473

Query: 1597 LGVVDRIWASGGQLADLVDREDVPLPEEPDTEDXXXXXXXXXXXXXXXXENSERHSQRCD 1418
            LGV+DRIWASGG+LADLVDREDVPLPEEPDTED                ENSERHSQRCD
Sbjct: 474  LGVIDRIWASGGRLADLVDREDVPLPEEPDTEDEAEIRKWKWKVRSVKKENSERHSQRCD 533

Query: 1417 IELKLAVSRKMKDEDGFYYPHNLDFRGRAYPMHPYLNHLGSDLCRGILEFAEGRPLGKSG 1238
            IELKLAV+RKMKDEDGF+YPHNLDFRGRAYPMHPYLNHLGSDLCRGILEFAEGRPLGKSG
Sbjct: 534  IELKLAVARKMKDEDGFFYPHNLDFRGRAYPMHPYLNHLGSDLCRGILEFAEGRPLGKSG 593

Query: 1237 LQWLKIHLANLYGSGVDKLSYKGRIAFAENHLEDIFDSADRPLEGKRWWLGAEDPFQCLA 1058
            L+WLKIHLAN+Y  GVDKLSY+GR+AF ENHLEDIFDSADRPLEG+RWWL AEDPFQCLA
Sbjct: 594  LRWLKIHLANVYAGGVDKLSYEGRVAFTENHLEDIFDSADRPLEGRRWWLSAEDPFQCLA 653

Query: 1057 TCMNLSEALRSPSPETTISHMPVHQDGSCNGLQHYAALGRDKLGAAAVNLVAGDKPADVY 878
            TC+NLSEALRS SPETTISHMPVHQDGSCNGLQHYAALGRDKLGAAAVNLVAG+KPADVY
Sbjct: 654  TCINLSEALRSSSPETTISHMPVHQDGSCNGLQHYAALGRDKLGAAAVNLVAGEKPADVY 713

Query: 877  SGIATRVLDIMKRDAAKDPATDPNVMRARLLINQVDRKLVKQTVMTSVYGVTYIGARDQI 698
            SGIA RVLDIM+RDA KDPAT+PN +RARLLI+QVDRKLVKQTVMTSVYGVTYIGARDQI
Sbjct: 714  SGIAARVLDIMQRDAQKDPATEPNALRARLLISQVDRKLVKQTVMTSVYGVTYIGARDQI 773

Query: 697  KKRLKERGAIEDDTELFSAACYAAKTTLTALGEMFEAARSIMSWLGDCAKIIALENEPVR 518
            K+RLKER AI D+ E+FSA+CYAAKTTLTALGEMFEAARSIMSWLGDCAK+IA EN PVR
Sbjct: 774  KRRLKERCAIADEGEVFSASCYAAKTTLTALGEMFEAARSIMSWLGDCAKVIASENHPVR 833

Query: 517  WTTPLGLPVVQPYRKLGRHLIKTSLQILTLQRETDKVMVKRQRTAFPPNFVHSLDGSHMM 338
            W TPLGLPVVQPYRKLGRHLIKTSLQ+L+LQRETDKVMVKRQRTAFPPNFVHSLDGSHMM
Sbjct: 834  WNTPLGLPVVQPYRKLGRHLIKTSLQVLSLQRETDKVMVKRQRTAFPPNFVHSLDGSHMM 893

Query: 337  MTAIACKDAGLNFAGVHDSYWTHACDVDQMNNILREKFVELYDAPILENLLESFQQSFPK 158
            MTA+AC+ AGLNFAGVHDSYWTHACDVD+MN ILREKFVELY  PILENLLE FQ+SFP 
Sbjct: 894  MTAVACQKAGLNFAGVHDSYWTHACDVDEMNRILREKFVELYGMPILENLLEGFQKSFPT 953

Query: 157  LKFPPLPERGDFDLREVLESPYFFN 83
            L FPPLPERGDFDLREVLESPYFFN
Sbjct: 954  LNFPPLPERGDFDLREVLESPYFFN 978


>ref|XP_010257888.1| PREDICTED: DNA-directed RNA polymerase 2B,
            chloroplastic/mitochondrial-like [Nelumbo nucifera]
          Length = 1031

 Score = 1476 bits (3821), Expect = 0.0
 Identities = 742/994 (74%), Positives = 825/994 (82%), Gaps = 16/994 (1%)
 Frame = -2

Query: 3016 MWRNLSKQSSLRKLNYFSESHSSLPVFCSVRSHQDLSFVERSVPLDLKDYVNTQNQELCF 2837
            MWR++++++SL K+    +S S L  F  +   QD    + + P +LK  ++ +  E  F
Sbjct: 40   MWRHIARRASLTKVRLSRDSSSILRTFGFMGFSQDSILNDTTRPFELKSSMSFRFSERSF 99

Query: 2836 SRDYSFWRNQK------IGCHKFAISSEPFGSTWSSRDYXXXXXXXXXXXXED----VDE 2687
             R+      +       +GC +  IS     +    + Y            E+    +DE
Sbjct: 100  LRNGELPSKEDELGRPILGCFRNPISPPRLSN--HPKGYASVAEAVCSMDAEEDLSAIDE 157

Query: 2686 IQELVEEMNKEIQ---EKGQQKQPKMVGGMGVAKYNMLRRRQIKLETEAWEEAAKEYQEL 2516
            IQEL+EEM KE +   E   QKQ K+VGGMG  KY +LRRRQ+K+ETEAWE+AAKEY+EL
Sbjct: 158  IQELLEEMGKEEKKELELRDQKQIKLVGGMGQGKYLLLRRRQVKIETEAWEQAAKEYREL 217

Query: 2515 LVDMCEQKLAPNLPYVKSLFLGWFEPLRDAIAAEQELCKKGKNRKSYAPNFDLLPAGMMA 2336
            L+DMCEQKLAPNLPY+KSLFLGWFEPLRD I AEQELC+KGKNR +YAP FD LPA MM+
Sbjct: 218  LMDMCEQKLAPNLPYMKSLFLGWFEPLRDCIVAEQELCRKGKNRTAYAPYFDQLPAEMMS 277

Query: 2335 VITXXXXXXXXXXXXXXGSARVVQAACHIGEAIEQEARIHRFLEKTKTKNALNRSSEE-E 2159
            VIT              GS RVVQAAC IGEAIE E RIH+FLEKT+ K   ++ ++  E
Sbjct: 278  VITMHKLMGLLMTGGEHGSCRVVQAACQIGEAIENEVRIHKFLEKTRKKTDKDKKADGGE 337

Query: 2158 PDPAVKEQERLRKKVNILMKKQKLHQVRKIVKQQDDLKPWGQDAQVKIGCRLIQILMETA 1979
             DP +KEQ+RLRKKV  LMKKQKL QVR+IVK QDD KPWGQDAQ K+G RLI++LM+TA
Sbjct: 338  SDPVIKEQQRLRKKVTDLMKKQKLQQVRQIVKGQDDSKPWGQDAQAKVGSRLIELLMQTA 397

Query: 1978 HIQPPVDQLEDGPPDIRPAFVHSLKTV--ETQRGSRRYGVIECDPLVRKGLEKTARHMVI 1805
            +IQPPVDQL DGPPDIRPAF HSLKTV  E Q+ SRRYGVIECDPLVRKGLE+TARHMVI
Sbjct: 398  YIQPPVDQLADGPPDIRPAFRHSLKTVTKEAQKTSRRYGVIECDPLVRKGLERTARHMVI 457

Query: 1804 PYMPMLVPPLHWTGYDRGAYLFLPSYIMRTHGAKQQREAVKRVPRKQLEPVFEALNTLGN 1625
            PYMPMLVPP++WTGYD+GAYLFLPSY+MRTHGA+QQREAVKR PRKQLEPVFEAL+TLGN
Sbjct: 458  PYMPMLVPPVNWTGYDKGAYLFLPSYVMRTHGARQQREAVKRAPRKQLEPVFEALDTLGN 517

Query: 1624 TKWKVNKRILGVVDRIWASGGQLADLVDREDVPLPEEPDTEDXXXXXXXXXXXXXXXXEN 1445
            TKW+VNKR+L VVDRIWASGG+LADLVDREDVP+PEEPDTED                EN
Sbjct: 518  TKWRVNKRVLSVVDRIWASGGRLADLVDREDVPIPEEPDTEDEAEIKKWKWKVKAAKKEN 577

Query: 1444 SERHSQRCDIELKLAVSRKMKDEDGFYYPHNLDFRGRAYPMHPYLNHLGSDLCRGILEFA 1265
            SERHSQRCDIELKLAV+R+MKDEDGF+YPHNLDFRGRAYPMHPYLNHLGSDLCRGILEFA
Sbjct: 578  SERHSQRCDIELKLAVARRMKDEDGFFYPHNLDFRGRAYPMHPYLNHLGSDLCRGILEFA 637

Query: 1264 EGRPLGKSGLQWLKIHLANLYGSGVDKLSYKGRIAFAENHLEDIFDSADRPLEGKRWWLG 1085
            EGRPLGKSGLQWLKIHLANLY  GVDKLSY+GRIAF ENHL+DIFDSADRPLEG+RWWL 
Sbjct: 638  EGRPLGKSGLQWLKIHLANLYAGGVDKLSYEGRIAFTENHLDDIFDSADRPLEGRRWWLN 697

Query: 1084 AEDPFQCLATCMNLSEALRSPSPETTISHMPVHQDGSCNGLQHYAALGRDKLGAAAVNLV 905
            AEDPFQCLA C+NLSEALRS SPETTISHMPVHQDGSCNGLQHYAALGRDKLGAAAVNLV
Sbjct: 698  AEDPFQCLAACINLSEALRSSSPETTISHMPVHQDGSCNGLQHYAALGRDKLGAAAVNLV 757

Query: 904  AGDKPADVYSGIATRVLDIMKRDAAKDPATDPNVMRARLLINQVDRKLVKQTVMTSVYGV 725
            AG+KPADVYSGIA RVLDIM+RDA KDP T PN M AR+LINQVDRKLVKQTVMTSVYGV
Sbjct: 758  AGEKPADVYSGIAARVLDIMRRDAEKDPETHPNAMHARILINQVDRKLVKQTVMTSVYGV 817

Query: 724  TYIGARDQIKKRLKERGAIEDDTELFSAACYAAKTTLTALGEMFEAARSIMSWLGDCAKI 545
            TYIGARDQIK+RLKER  I DD+ELF A+CYAAKTTLTALGEMFEAARSIMSWLGDCAKI
Sbjct: 818  TYIGARDQIKRRLKERNVIADDSELFGASCYAAKTTLTALGEMFEAARSIMSWLGDCAKI 877

Query: 544  IALENEPVRWTTPLGLPVVQPYRKLGRHLIKTSLQILTLQRETDKVMVKRQRTAFPPNFV 365
            IA EN+PVRWTTPLGLPVVQPYRKLGRHLIKTSLQ+LTLQRETDKVMVKRQRTAFPPNFV
Sbjct: 878  IASENQPVRWTTPLGLPVVQPYRKLGRHLIKTSLQVLTLQRETDKVMVKRQRTAFPPNFV 937

Query: 364  HSLDGSHMMMTAIACKDAGLNFAGVHDSYWTHACDVDQMNNILREKFVELYDAPILENLL 185
            HSLDGSHMMMTA+AC+ AGLNFAGVHDSYWTHACD+D+MN ILREKFVELY+ PILENLL
Sbjct: 938  HSLDGSHMMMTAVACRKAGLNFAGVHDSYWTHACDIDEMNKILREKFVELYEKPILENLL 997

Query: 184  ESFQQSFPKLKFPPLPERGDFDLREVLESPYFFN 83
            ESFQQSFP L FPPLPERGDFDLREVL+SPYFFN
Sbjct: 998  ESFQQSFPTLNFPPLPERGDFDLREVLDSPYFFN 1031


>ref|XP_010261414.1| PREDICTED: DNA-directed RNA polymerase 2B,
            chloroplastic/mitochondrial-like isoform X1 [Nelumbo
            nucifera]
          Length = 990

 Score = 1454 bits (3764), Expect = 0.0
 Identities = 732/992 (73%), Positives = 819/992 (82%), Gaps = 14/992 (1%)
 Frame = -2

Query: 3016 MWRNLSKQSSLRKLNYFS-ESHSSLPVFCSVRSHQDLSFVERSVPLDLKDYVNTQNQELC 2840
            MWRN+ KQ+     N+FS +S S L  F  V   Q   F +++   + K  +N    E C
Sbjct: 1    MWRNIVKQAC--STNFFSRDSSSMLRTFGVVGYSQYPVFHDKARQFEFKSSINAGFSESC 58

Query: 2839 FSRD-YSFWRNQKIGCHKFAISSEPFGSTWSSRDYXXXXXXXXXXXXED-------VDEI 2684
            F R+  S  +   +G   F       G +  S                D       VDEI
Sbjct: 59   FLRNGESPSKEDDLGILSFGCFRNSMGLSRFSNHPKGYASVAEVLSSTDAEEDVSVVDEI 118

Query: 2683 QELVEEMNKEIQEK--GQQKQPKMVGGMGVAKYNMLRRRQIKLETEAWEEAAKEYQELLV 2510
            QEL+EEM+KE +E     QKQ K+VGGMG  KY +LRRRQ+K+ETEAWE+AAKEY+ELL+
Sbjct: 119  QELLEEMSKEEKELEFSHQKQTKLVGGMGQGKYLLLRRRQVKIETEAWEQAAKEYKELLM 178

Query: 2509 DMCEQKLAPNLPYVKSLFLGWFEPLRDAIAAEQELCKKGKNRKSYAPNFDLLPAGMMAVI 2330
            DMCEQKLAPNLPY+KSLFLGWFEPLRD IAAEQELC+KGKNR +YAP FD LPA MM+VI
Sbjct: 179  DMCEQKLAPNLPYMKSLFLGWFEPLRDCIAAEQELCRKGKNRAAYAPYFDQLPAEMMSVI 238

Query: 2329 TXXXXXXXXXXXXXXGSARVVQAACHIGEAIEQEARIHRFLEKTKTKNALNRSSEE-EPD 2153
            T              GSARVVQAAC IG+AIE E RI++FLEKTK K   ++ +E  E D
Sbjct: 239  TMHKLVGLLMTGGEHGSARVVQAACLIGQAIENEVRIYKFLEKTKKKTDKDKKAEGGESD 298

Query: 2152 PAVKEQERLRKKVNILMKKQKLHQVRKIVKQQDDLKPWGQDAQVKIGCRLIQILMETAHI 1973
            PA+KEQ+RLRKKV  LMKKQKL QVR+IVK QDD KPWGQDAQ K+G  LI++LM+TA+I
Sbjct: 299  PAIKEQQRLRKKVTDLMKKQKLQQVRQIVKSQDDSKPWGQDAQAKVGSHLIELLMQTAYI 358

Query: 1972 QPPVDQLEDGPPDIRPAFVHSLKTV--ETQRGSRRYGVIECDPLVRKGLEKTARHMVIPY 1799
            Q P DQL DGPPDIRPAF H+LKT+  E+Q+ SRRYG+IECDPLVRKGLE+TARHMVIPY
Sbjct: 359  QSPADQLADGPPDIRPAFRHTLKTITKESQKTSRRYGLIECDPLVRKGLERTARHMVIPY 418

Query: 1798 MPMLVPPLHWTGYDRGAYLFLPSYIMRTHGAKQQREAVKRVPRKQLEPVFEALNTLGNTK 1619
            MPMLVPPL+WTGYD+GAYLFLPSY+MRTHGA+QQREAVKR  RKQLEP+FEAL+TLGNTK
Sbjct: 419  MPMLVPPLNWTGYDKGAYLFLPSYVMRTHGARQQREAVKRTSRKQLEPIFEALDTLGNTK 478

Query: 1618 WKVNKRILGVVDRIWASGGQLADLVDREDVPLPEEPDTEDXXXXXXXXXXXXXXXXENSE 1439
            W++NKR+LGVVDRIWASGG+LADLVDREDVPLPEEP+TED                ENSE
Sbjct: 479  WRINKRVLGVVDRIWASGGRLADLVDREDVPLPEEPETEDEAELKKWKWKVKAVKKENSE 538

Query: 1438 RHSQRCDIELKLAVSRKMKDEDGFYYPHNLDFRGRAYPMHPYLNHLGSDLCRGILEFAEG 1259
            RHSQRCD ELKLAV+R+MKDE+GF+YPHNLDFRGRAYPMHPYLNHLGSDLCRGILEFAEG
Sbjct: 539  RHSQRCDTELKLAVARRMKDENGFFYPHNLDFRGRAYPMHPYLNHLGSDLCRGILEFAEG 598

Query: 1258 RPLGKSGLQWLKIHLANLYGSGVDKLSYKGRIAFAENHLEDIFDSADRPLEGKRWWLGAE 1079
            RPLGKSGL+WLKIHLANLY  GVDKLSY+GRIAF ENHL+DIFDSADRPLEG+RWWL A+
Sbjct: 599  RPLGKSGLRWLKIHLANLYAGGVDKLSYEGRIAFTENHLDDIFDSADRPLEGRRWWLNAD 658

Query: 1078 DPFQCLATCMNLSEALRSPSPETTISHMPVHQDGSCNGLQHYAALGRDKLGAAAVNLVAG 899
            DPFQCLA C+NLSEALRS SPET ISH+P+HQDGSCNGLQHYAALGRDKLGAAAVNLVAG
Sbjct: 659  DPFQCLAVCINLSEALRSCSPETMISHIPIHQDGSCNGLQHYAALGRDKLGAAAVNLVAG 718

Query: 898  DKPADVYSGIATRVLDIMKRDAAKDPATDPNVMRARLLINQVDRKLVKQTVMTSVYGVTY 719
            DKPADVYSG+A RVLDIM+RDA KDP T+PN M ARLLINQVDRKLVKQTVMTSVYGVTY
Sbjct: 719  DKPADVYSGVAARVLDIMRRDAQKDPTTEPNAMHARLLINQVDRKLVKQTVMTSVYGVTY 778

Query: 718  IGARDQIKKRLKERGAIEDDTELFSAACYAAKTTLTALGEMFEAARSIMSWLGDCAKIIA 539
            IGARDQIK+RLKER AI D++ELF A+CYAAKTT+TALGEMF+AARSIMSWLGDCAKIIA
Sbjct: 779  IGARDQIKRRLKERNAIADESELFGASCYAAKTTITALGEMFKAARSIMSWLGDCAKIIA 838

Query: 538  LENEPVRWTTPLGLPVVQPYRKLGRHLIKTSLQILTLQRETDKVMVKRQRTAFPPNFVHS 359
             EN+PVRWTTPLGLPVVQPYRKLGRHLIKTSLQ+LTLQRETDKVMVKRQRTAFPPNF+HS
Sbjct: 839  SENQPVRWTTPLGLPVVQPYRKLGRHLIKTSLQVLTLQRETDKVMVKRQRTAFPPNFIHS 898

Query: 358  LDGSHMMMTAIACKDAGLNFAGVHDSYWTHACDVDQMNNILREKFVELYDAPILENLLES 179
            LDGSHMMMTA+ACK AGLNFAGVHDS+WTHACDVD+MN ILREKFVELY+ PI+ENLLES
Sbjct: 899  LDGSHMMMTAVACKRAGLNFAGVHDSFWTHACDVDEMNKILREKFVELYETPIMENLLES 958

Query: 178  FQQSFPKLKFPPLPERGDFDLREVLESPYFFN 83
            FQQSFP L FPPLPE GDFDL EVL SPYFFN
Sbjct: 959  FQQSFPALSFPPLPECGDFDLHEVLVSPYFFN 990


>ref|XP_007225383.1| hypothetical protein PRUPE_ppa000780mg [Prunus persica]
            gi|462422319|gb|EMJ26582.1| hypothetical protein
            PRUPE_ppa000780mg [Prunus persica]
          Length = 1006

 Score = 1440 bits (3727), Expect = 0.0
 Identities = 729/1018 (71%), Positives = 829/1018 (81%), Gaps = 40/1018 (3%)
 Frame = -2

Query: 3016 MWRNLSKQSSLRKLNYFSESHSSLPVFCSVRSHQDLSFVERSVPLDLKDYVN-------- 2861
            MWRNL+KQ + RK N  S+SH   P   S+   Q+ SF++++   + +  +N        
Sbjct: 1    MWRNLAKQVASRKTNLSSQSHFGSPSSTSMIFSQESSFLDKARHFEARKCINNRILVMGF 60

Query: 2860 -------TQNQEL--CFSRDYSFWRNQKIGCH---KFAISSEPFGSTWSSRDYXXXXXXX 2717
                   +Q +EL  C S + S+       C+    +A  +E   ST    D        
Sbjct: 61   RQVGDMASQKEELGRCSSLNPSYPYGISGFCNYAKGYASVAEAIASTDGEED-------- 112

Query: 2716 XXXXXEDVDEIQELVEEMNKE-IQEKGQQKQPK-MVGGMGVAKYNMLRRRQIKLETEAWE 2543
                    +EIQE++E++ +E    +   KQPK +V GMGV KYN+LR+RQIKLETEAW+
Sbjct: 113  ----SSGSEEIQEMLEDLIRENNMVESHFKQPKRVVVGMGVGKYNLLRKRQIKLETEAWQ 168

Query: 2542 EAAKEYQELLVDMCEQKLAPNLPYVKSLFLGWFEPLRDAIAAEQELCKKGKNRKSYAPNF 2363
            EAAKEYQELL DMCEQKLAPNLPY+KSLFLGWFEPLRDAIAA+Q+ CK+  +R+S+AP F
Sbjct: 169  EAAKEYQELLADMCEQKLAPNLPYIKSLFLGWFEPLRDAIAADQDSCKQPNSRQSHAPYF 228

Query: 2362 DLLPAGMMAVIT-XXXXXXXXXXXXXXGSARVVQAACHIGEAIEQEARIHRFLEKT-KTK 2189
            D LPA  MAVIT               GS RVVQAAC IGEAIE E RIHRFLEKT K K
Sbjct: 229  DHLPADKMAVITMHKLMGLLMTNNGGIGSVRVVQAACAIGEAIEHEVRIHRFLEKTKKKK 288

Query: 2188 NALNRSSE--------------EEPDPAVKEQERLRKKVNILMKKQKLHQVRKIVKQQDD 2051
            N +++ +E              +E +   KEQERLRKKVN L+K+QK+ QVR IVK+Q+D
Sbjct: 289  NTIDKKAEADSVPVTIEQEKLADEQEKLTKEQERLRKKVNKLIKRQKMQQVRGIVKEQED 348

Query: 2050 LKPWGQDAQVKIGCRLIQILMETAHIQPPVDQLEDGPPDIRPAFVHSLKTV--ETQRGSR 1877
            LKPWGQ+A VK+GCRLIQ+LM+TA+IQPPVDQ+ DGPPDIRPAFVH+LKT+  +TQ+ SR
Sbjct: 349  LKPWGQEAHVKVGCRLIQLLMDTAYIQPPVDQIGDGPPDIRPAFVHNLKTITRDTQKTSR 408

Query: 1876 RYGVIECDPLVRKGLEKTARHMVIPYMPMLVPPLHWTGYDRGAYLFLPSYIMRTHGAKQQ 1697
            RYGVIECDP+VRKG+EKTARHMV+PYMPMLVPP++WTGYDRGAYLFLPSY+MRTHGAKQQ
Sbjct: 409  RYGVIECDPIVRKGMEKTARHMVMPYMPMLVPPINWTGYDRGAYLFLPSYVMRTHGAKQQ 468

Query: 1696 REAVKRVPRKQLEPVFEALNTLGNTKWKVNKRILGVVDRIWASGGQLADLVDREDVPLPE 1517
            RE VKR PRKQLEPVFEAL+TLG+TKW+VNKR+LGV+DRIWASGG+LADLVDREDVPLPE
Sbjct: 469  REVVKRTPRKQLEPVFEALDTLGSTKWRVNKRVLGVIDRIWASGGRLADLVDREDVPLPE 528

Query: 1516 EPDTEDXXXXXXXXXXXXXXXXENSERHSQRCDIELKLAVSRKMKDEDGFYYPHNLDFRG 1337
            EPDTED                ENSERHSQRCDIELKLA SRKMKDE+GFYYPHNLDFRG
Sbjct: 529  EPDTEDEAEIRKWKWKLKAAKKENSERHSQRCDIELKLAASRKMKDEEGFYYPHNLDFRG 588

Query: 1336 RAYPMHPYLNHLGSDLCRGILEFAEGRPLGKSGLQWLKIHLANLYGSGVDKLSYKGRIAF 1157
            RAYPMHPYLNHLGSD+CRGILEF+EGR LGKSGL+WLKIHLANLY  GVDKLS+  R AF
Sbjct: 589  RAYPMHPYLNHLGSDMCRGILEFSEGRHLGKSGLRWLKIHLANLYAGGVDKLSFDDRAAF 648

Query: 1156 AENHLEDIFDSADRPLEGKRWWLGAEDPFQCLATCMNLSEALRSPSPETTISHMPVHQDG 977
             ENH+++IFDSADRPLEG+RWWLGAEDPFQCLA C+NL EALRSPSPETTIS+MPVHQDG
Sbjct: 649  TENHVDEIFDSADRPLEGRRWWLGAEDPFQCLAACINLCEALRSPSPETTISYMPVHQDG 708

Query: 976  SCNGLQHYAALGRDKLGAAAVNLVAGDKPADVYSGIATRVLDIMKRDAAKDPATDPNVMR 797
            SCNGLQHYAALGRDKLGAAAVNLV GDKPADVYSGIA RVLDIM+ DA KDPAT+PN + 
Sbjct: 709  SCNGLQHYAALGRDKLGAAAVNLVGGDKPADVYSGIAARVLDIMRNDAEKDPATNPNALH 768

Query: 796  ARLLINQVDRKLVKQTVMTSVYGVTYIGARDQIKKRLKERGAIEDDTELFSAACYAAKTT 617
            ARLLINQVDRKLVKQTVMTSVYGVTY+GARDQIK+RLKERG+I DDT LF+AACYAA+TT
Sbjct: 769  ARLLINQVDRKLVKQTVMTSVYGVTYVGARDQIKRRLKERGSIADDTALFAAACYAARTT 828

Query: 616  LTALGEMFEAARSIMSWLGDCAKIIALENEPVRWTTPLGLPVVQPYRKLGRHLIKTSLQI 437
            LTALGEMFEAARSIMSWLG+CAK+IA EN+PVRW TPLGLPVVQPYR+LGRHLIKTSLQ+
Sbjct: 829  LTALGEMFEAARSIMSWLGECAKVIASENQPVRWITPLGLPVVQPYRQLGRHLIKTSLQV 888

Query: 436  LTLQRETDKVMVKRQRTAFPPNFVHSLDGSHMMMTAIACKDAGLNFAGVHDSYWTHACDV 257
            LTLQRETDKVMVKRQRTAFPPNFVHSLDGSHMMMTA+ACK AGLNFAGVHDSYWTHACD+
Sbjct: 889  LTLQRETDKVMVKRQRTAFPPNFVHSLDGSHMMMTAVACKKAGLNFAGVHDSYWTHACDI 948

Query: 256  DQMNNILREKFVELYDAPILENLLESFQQSFPKLKFPPLPERGDFDLREVLESPYFFN 83
            D+MN ILREKFVELY+APILENLLE FQQSFP L FPPLP+RGDFDLR+VLESPYFFN
Sbjct: 949  DEMNRILREKFVELYEAPILENLLEGFQQSFPTLTFPPLPDRGDFDLRDVLESPYFFN 1006


>ref|XP_008243783.1| PREDICTED: DNA-directed RNA polymerase 1, mitochondrial [Prunus mume]
          Length = 1006

 Score = 1432 bits (3706), Expect = 0.0
 Identities = 727/1018 (71%), Positives = 825/1018 (81%), Gaps = 40/1018 (3%)
 Frame = -2

Query: 3016 MWRNLSKQSSLRKLNYFSESHSSLPVFCSVRSHQDLSFVERSVPLDLKDYVN-------- 2861
            MWRNL+KQ + RK N  S+SH S P   S+   Q+ SF+E++   + +  +N        
Sbjct: 1    MWRNLAKQVASRKTNLSSQSHFSSPSSTSMIFSQESSFLEKAWHFEARKCINNRILVMGF 60

Query: 2860 -------TQNQEL--CFSRDYSFWRNQKIGCH---KFAISSEPFGSTWSSRDYXXXXXXX 2717
                   +Q  EL  C S + S+       C+    +A  +E   ST    D        
Sbjct: 61   RQVGDMASQKDELGRCSSLNPSYPYGISGFCNYAKGYASVAEAIASTDGEED-------- 112

Query: 2716 XXXXXEDVDEIQELVEEMNKE-IQEKGQQKQPK-MVGGMGVAKYNMLRRRQIKLETEAWE 2543
                    +EIQE++E++ +E    +   KQPK +V GMGV KYN+LR+RQIKLETEAW+
Sbjct: 113  ----SSGSEEIQEMLEDLIRENNMVESHFKQPKRVVVGMGVGKYNLLRKRQIKLETEAWQ 168

Query: 2542 EAAKEYQELLVDMCEQKLAPNLPYVKSLFLGWFEPLRDAIAAEQELCKKGKNRKSYAPNF 2363
            EAAKEYQELL DMCEQKLAPNLPY+KSLFLGWFEPLRDAIAA+Q+ CK+  +R+S+AP F
Sbjct: 169  EAAKEYQELLADMCEQKLAPNLPYIKSLFLGWFEPLRDAIAADQDSCKQTNSRQSHAPYF 228

Query: 2362 DLLPAGMMAVIT-XXXXXXXXXXXXXXGSARVVQAACHIGEAIEQEARIHRFLEKT-KTK 2189
            D LPA  MAVIT               GS RVVQAAC IGEAIE E RIHRFLEKT K K
Sbjct: 229  DHLPADKMAVITMHKLMGLLMTNNGGVGSVRVVQAACAIGEAIEHEVRIHRFLEKTKKKK 288

Query: 2188 NALNRSSEEEPDPA--------------VKEQERLRKKVNILMKKQKLHQVRKIVKQQDD 2051
            N  ++ +E +  P                 EQE+LRKKVN L+K+QK+ QVR IVK+Q+D
Sbjct: 289  NTTDKKAEADSVPVTDEQEKLADEQGKLADEQEKLRKKVNKLIKRQKMQQVRGIVKEQED 348

Query: 2050 LKPWGQDAQVKIGCRLIQILMETAHIQPPVDQLEDGPPDIRPAFVHSLKTV--ETQRGSR 1877
            LKPWGQ+A VK+GCRLIQ+LM+TA+IQPPVDQ+ DGPPDIRPAFVH+LKT+  +TQ+ SR
Sbjct: 349  LKPWGQEAHVKVGCRLIQLLMDTAYIQPPVDQIGDGPPDIRPAFVHNLKTITKDTQKTSR 408

Query: 1876 RYGVIECDPLVRKGLEKTARHMVIPYMPMLVPPLHWTGYDRGAYLFLPSYIMRTHGAKQQ 1697
            RYGVIECDPLVRKG++KTARHMV+PYMPMLVPP++WTGYDRGAYLFLPSY+MRTHGAKQQ
Sbjct: 409  RYGVIECDPLVRKGMDKTARHMVMPYMPMLVPPINWTGYDRGAYLFLPSYVMRTHGAKQQ 468

Query: 1696 REAVKRVPRKQLEPVFEALNTLGNTKWKVNKRILGVVDRIWASGGQLADLVDREDVPLPE 1517
            RE VKR PRKQLEPVFEAL+TLG+TKW+VNKR+LGV+DRIWASGG+LADLVDREDVPLPE
Sbjct: 469  REVVKRTPRKQLEPVFEALDTLGSTKWRVNKRVLGVIDRIWASGGRLADLVDREDVPLPE 528

Query: 1516 EPDTEDXXXXXXXXXXXXXXXXENSERHSQRCDIELKLAVSRKMKDEDGFYYPHNLDFRG 1337
            EPDTED                ENSERHSQRCDIELKLA SRKMKDE+GFYYPHNLDFRG
Sbjct: 529  EPDTEDEAEIRKWKWKLKAAKKENSERHSQRCDIELKLAASRKMKDEEGFYYPHNLDFRG 588

Query: 1336 RAYPMHPYLNHLGSDLCRGILEFAEGRPLGKSGLQWLKIHLANLYGSGVDKLSYKGRIAF 1157
            RAYPMHPYLNHLGSD+CRGILEF+EGR LGKSGL+WLKIHLANLY  GVDKLS+  R AF
Sbjct: 589  RAYPMHPYLNHLGSDMCRGILEFSEGRHLGKSGLRWLKIHLANLYAGGVDKLSFDDRAAF 648

Query: 1156 AENHLEDIFDSADRPLEGKRWWLGAEDPFQCLATCMNLSEALRSPSPETTISHMPVHQDG 977
             ENH+++IFDSADRPLEG+RWWLGAEDPFQCLA C+NL EALRSPSPETTIS+MPVHQDG
Sbjct: 649  TENHVDEIFDSADRPLEGRRWWLGAEDPFQCLAACINLCEALRSPSPETTISYMPVHQDG 708

Query: 976  SCNGLQHYAALGRDKLGAAAVNLVAGDKPADVYSGIATRVLDIMKRDAAKDPATDPNVMR 797
            SCNGLQHYAALGRDKLGAAAVNLV GDKPADVYSGIA RVLDIM+ DA KDPAT+PN + 
Sbjct: 709  SCNGLQHYAALGRDKLGAAAVNLVGGDKPADVYSGIAARVLDIMRNDAEKDPATNPNALH 768

Query: 796  ARLLINQVDRKLVKQTVMTSVYGVTYIGARDQIKKRLKERGAIEDDTELFSAACYAAKTT 617
            ARLLINQVDRKLVKQTVMTSVYGVTY+GAR+QIK+RLKERG+I DDT LF AACYAA+TT
Sbjct: 769  ARLLINQVDRKLVKQTVMTSVYGVTYVGAREQIKRRLKERGSIADDTALFVAACYAARTT 828

Query: 616  LTALGEMFEAARSIMSWLGDCAKIIALENEPVRWTTPLGLPVVQPYRKLGRHLIKTSLQI 437
            LTALGEMFEAARSIMSWLG+CAK+IA EN+PVRW TPLGLPVVQPYR+LGRHLIKTSLQ+
Sbjct: 829  LTALGEMFEAARSIMSWLGECAKVIASENQPVRWITPLGLPVVQPYRQLGRHLIKTSLQV 888

Query: 436  LTLQRETDKVMVKRQRTAFPPNFVHSLDGSHMMMTAIACKDAGLNFAGVHDSYWTHACDV 257
            LTLQRETDKVMVKRQRTAFPPNFVHSLDGSHMMMTA+ACK AGLNFAGVHDSYWTHACD+
Sbjct: 889  LTLQRETDKVMVKRQRTAFPPNFVHSLDGSHMMMTAVACKKAGLNFAGVHDSYWTHACDI 948

Query: 256  DQMNNILREKFVELYDAPILENLLESFQQSFPKLKFPPLPERGDFDLREVLESPYFFN 83
            D+MN ILREKFVELY+APILENLLE FQ+SFP L FPPLP+RGDFDLR+VLESPYFFN
Sbjct: 949  DEMNRILREKFVELYEAPILENLLEGFQRSFPTLTFPPLPDRGDFDLRDVLESPYFFN 1006


>ref|XP_012438460.1| PREDICTED: DNA-directed RNA polymerase 1B, mitochondrial isoform X1
            [Gossypium raimondii] gi|763783438|gb|KJB50509.1|
            hypothetical protein B456_008G174700 [Gossypium
            raimondii]
          Length = 996

 Score = 1428 bits (3696), Expect = 0.0
 Identities = 729/998 (73%), Positives = 815/998 (81%), Gaps = 20/998 (2%)
 Frame = -2

Query: 3016 MWRNLSKQSS-LRKLNYFSES-HSSLPVFCSVRSHQDLSFVERSVPLDLKDYVNTQNQEL 2843
            MWR+L KQ+S   K  +  ES  SSL    S    Q  +F+ +  P    ++  +    L
Sbjct: 1    MWRSLLKQASHTHKSKFVPESCTSSLSSSSSTGFCQTSAFINKFRPSKAINHGFSGCPIL 60

Query: 2842 CFSRDYSFWRNQK--IGCHKFAISSEPF---GSTWSSRDYXXXXXXXXXXXXE--DVDEI 2684
             F  +Y F  +QK  +G   F+ S  P    G  W+ + Y            +    +EI
Sbjct: 61   GFRENYVF-PSQKDCLGRFGFSHSGNPLTFSGKFWNFKGYASAAEAIVSNEDDLSGSEEI 119

Query: 2683 QELVEEMNKEIQEKGQQKQPK-MVGGMGVAKYNMLRRRQIKLETEAWEEAAKEYQELLVD 2507
             ELVE M KE +++   KQPK MVGGMGVAKYN L+RRQIK+ETEAWEEAAKEYQEL+ D
Sbjct: 120  NELVEAMIKEERKESFSKQPKIMVGGMGVAKYNTLKRRQIKIETEAWEEAAKEYQELIAD 179

Query: 2506 MCEQKLAPNLPYVKSLFLGWFEPLRDAIAAEQELCKKGKNRKSYAPNFDLLPAGMMAVIT 2327
            MC+QKLAPNLPYVKSLFLGWFEPLRD+IAAEQE+CK G  + S+A  F+ L A MMAV+T
Sbjct: 180  MCQQKLAPNLPYVKSLFLGWFEPLRDSIAAEQEVCK-GNFKISHAAYFNELSADMMAVVT 238

Query: 2326 XXXXXXXXXXXXXXGSA-RVVQAACHIGEAIEQEARIHRFLEKTKTKNALNRSSEEEPDP 2150
                              RVVQAAC IGEAIE EARI +FLEKTK KN  ++ S  E +P
Sbjct: 239  MHKLMGLLMTNTAGTGGIRVVQAACQIGEAIENEARIQKFLEKTKKKNTTDKKSVTESEP 298

Query: 2149 AVKEQ-------ERLRKKVNILMKKQKLHQVRKIVKQQDDLKPWGQDAQVKIGCRLIQIL 1991
               EQ       E+LRKKV  LMKKQK+HQVR+IVK +D  KPWGQ+A VK+GCRLIQ+L
Sbjct: 299  ETTEQGKLAKNEEKLRKKVTQLMKKQKVHQVREIVKGRDTSKPWGQEAHVKVGCRLIQLL 358

Query: 1990 METAHIQPPVDQLEDGPPDIRPAFVHSLKTV--ETQRGSRRYGVIECDPLVRKGLEKTAR 1817
            ME A+IQPPVDQ+ DGPPDIRPAFVH+LK V  +  +GSRRYGVIECDPLVRKGLEKTA+
Sbjct: 359  MENAYIQPPVDQIGDGPPDIRPAFVHALKNVIKDGNKGSRRYGVIECDPLVRKGLEKTAK 418

Query: 1816 HMVIPYMPMLVPPLHWTGYDRGAYLFLPSYIMRTHGAKQQREAVKRVPRKQLEPVFEALN 1637
            HMVIPYMPMLVPP +WTGYD+GAYLFLPSY+MRTHGAKQQRE VKR PRKQLEPVFEAL+
Sbjct: 419  HMVIPYMPMLVPPQNWTGYDQGAYLFLPSYVMRTHGAKQQRETVKRTPRKQLEPVFEALD 478

Query: 1636 TLGNTKWKVNKRILGVVDRIWASGGQLADLVDREDVPLPEEPDTEDXXXXXXXXXXXXXX 1457
            TLGNTKW++N+RILGVVDR+WA+GG+LADLVDREDVPLPEEPDTED              
Sbjct: 479  TLGNTKWRINRRILGVVDRLWANGGRLADLVDREDVPLPEEPDTEDETEIRKWKWKVKAV 538

Query: 1456 XXENSERHSQRCDIELKLAVSRKMKDEDGFYYPHNLDFRGRAYPMHPYLNHLGSDLCRGI 1277
              EN+ERHSQRCD+ELKLAV+RKMKDE GFYYPHNLDFRGRAYPMHPYLNHLGSDLCRG+
Sbjct: 539  KKENNERHSQRCDVELKLAVARKMKDEVGFYYPHNLDFRGRAYPMHPYLNHLGSDLCRGV 598

Query: 1276 LEFAEGRPLGKSGLQWLKIHLANLYGSGVDKLSYKGRIAFAENHLEDIFDSADRPLEGKR 1097
            LEFAEGRPLGKSGL+WLKIHLANLY  GVDKLSY+GR+ F E+HL+DIFDSADRPLEGKR
Sbjct: 599  LEFAEGRPLGKSGLRWLKIHLANLYAGGVDKLSYEGRVEFTESHLDDIFDSADRPLEGKR 658

Query: 1096 WWLGAEDPFQCLATCMNLSEALRSPSPETTISHMPVHQDGSCNGLQHYAALGRDKLGAAA 917
            WWL AEDPFQCLA C+NLSEALRS  PE TISHMPVHQDGSCNGLQHYAALGRDKLGAAA
Sbjct: 659  WWLSAEDPFQCLAACINLSEALRSSIPEATISHMPVHQDGSCNGLQHYAALGRDKLGAAA 718

Query: 916  VNLVAGDKPADVYSGIATRVLDIMKRDAAKDPATDPNVMRARLLINQVDRKLVKQTVMTS 737
            VNLVAGDKPADVYSGIA RVLDIMKRDA +DPAT+PN + ARLLINQVDRKLVKQTVMTS
Sbjct: 719  VNLVAGDKPADVYSGIAARVLDIMKRDAQEDPATNPNALHARLLINQVDRKLVKQTVMTS 778

Query: 736  VYGVTYIGARDQIKKRLKERGAIEDDTELFSAACYAAKTTLTALGEMFEAARSIMSWLGD 557
            VYGVTY+GARDQIK+RLKERGAI DDT+LF A+CYAA+TTLTALGEMF+AARSIM WLG+
Sbjct: 779  VYGVTYVGARDQIKRRLKERGAIADDTQLFVASCYAARTTLTALGEMFQAARSIMGWLGE 838

Query: 556  CAKIIALENEPVRWTTPLGLPVVQPYRKLGRHLIKTSLQILTLQRETDKVMVKRQRTAFP 377
            CAK+IA EN+PVRW TPLGLPVVQPYR+LGRHLIKTSLQ+LTLQRETDKVMVKRQRTAFP
Sbjct: 839  CAKVIASENQPVRWVTPLGLPVVQPYRQLGRHLIKTSLQVLTLQRETDKVMVKRQRTAFP 898

Query: 376  PNFVHSLDGSHMMMTAIACKDAGLNFAGVHDSYWTHACDVDQMNNILREKFVELYDAPIL 197
            PNFVHSLDGSHMMMTA+ACK AGLNFAGVHDSYWTHACDVD+MN ILREKFVELY+APIL
Sbjct: 899  PNFVHSLDGSHMMMTAVACKKAGLNFAGVHDSYWTHACDVDEMNRILREKFVELYEAPIL 958

Query: 196  ENLLESFQQSFPKLKFPPLPERGDFDLREVLESPYFFN 83
            ENLLESFQ++FP L FPPLPERGDFDLREVLESPYFFN
Sbjct: 959  ENLLESFQKAFPSLNFPPLPERGDFDLREVLESPYFFN 996


>ref|XP_009355625.1| PREDICTED: DNA-directed RNA polymerase 1, mitochondrial-like [Pyrus x
            bretschneideri]
          Length = 1007

 Score = 1424 bits (3685), Expect = 0.0
 Identities = 721/1008 (71%), Positives = 821/1008 (81%), Gaps = 30/1008 (2%)
 Frame = -2

Query: 3016 MWRNLSKQSSLRKLNYFSESHSSLPVFCSVRSHQDLSFVERSVPLDLKDYVNTQNQELCF 2837
            MWRN +K+ + RK N  S+ H       SV+  Q+ SF+E++   D ++ VN +   + F
Sbjct: 1    MWRNFAKKVASRKANPSSQFHLGFATSSSVKFSQESSFIEKTRHFDARNCVNNRLLVMGF 60

Query: 2836 SRDYSFWRNQKIGCHKFAISSEPF-----GSTWSSRDYXXXXXXXXXXXXED----VDEI 2684
             R      +QK    + ++ +  +     G    +R Y            ++     +EI
Sbjct: 61   -RQIGDTASQKDELGRCSLLNPSYFHGVSGFYGYARGYASAAEAIASTDGDEESSGSEEI 119

Query: 2683 QELVEEMNKEIQE-KGQQKQP-KMVGGMGVAKYNMLRRRQIKLETEAWEEAAKEYQELLV 2510
            QEL+E++ +E  + +   KQP K+V G+GV KYN+LR+RQIKLETEAWEEAA EYQELLV
Sbjct: 120  QELLEDLIRENNKVESHFKQPKKVVAGIGVGKYNLLRKRQIKLETEAWEEAANEYQELLV 179

Query: 2509 DMCEQKLAPNLPYVKSLFLGWFEPLRDAIAAEQELCKKGKNRKSYAPNFDLLPAGMMAVI 2330
            DMCEQKLAPNLPY+KSLFLGWFEPLR+AIA +QE C++  NR S+AP  D LPA  MAVI
Sbjct: 180  DMCEQKLAPNLPYIKSLFLGWFEPLRNAIAEDQEACRQPNNRVSHAPYIDHLPADKMAVI 239

Query: 2329 T-XXXXXXXXXXXXXXGSARVVQAACHIGEAIEQEARIHRFLEKT-KTKNALNRSSEEEP 2156
            T               GS RVVQAAC IGEAIE E RIHRFLEKT K KN  ++  E+E 
Sbjct: 240  TMHKLMGLLMTNNGGVGSVRVVQAACAIGEAIENEVRIHRFLEKTKKKKNPTDKKPEDES 299

Query: 2155 DPAV---------------KEQERLRKKVNILMKKQKLHQVRKIVKQQDDLKPWGQDAQV 2021
            DP +               KEQ+RLRKKVN L+KKQK+ QVR+IVK+Q+DLKPWGQ+A V
Sbjct: 300  DPVIIEQEQLMISEQEKLTKEQQRLRKKVNKLIKKQKMKQVREIVKEQEDLKPWGQEAHV 359

Query: 2020 KIGCRLIQILMETAHIQPPVDQLEDGPPDIRPAFVHSLKTV--ETQRGSRRYGVIECDPL 1847
            K+GCRLIQ+LM+TA+IQPPVDQ  D P DIRPAFVH LKT+  +TQ+ SRRYGVIECDPL
Sbjct: 360  KVGCRLIQLLMDTAYIQPPVDQSGDDPLDIRPAFVHVLKTITKDTQKTSRRYGVIECDPL 419

Query: 1846 VRKGLEKTARHMVIPYMPMLVPPLHWTGYDRGAYLFLPSYIMRTHGAKQQREAVKRVPRK 1667
            VRKG+EK+ARHMVIPYMPMLVPP++WTGYDRGAYLFLPSY+MRTHGAKQQR+ VKR PR 
Sbjct: 420  VRKGMEKSARHMVIPYMPMLVPPINWTGYDRGAYLFLPSYVMRTHGAKQQRQVVKRTPRT 479

Query: 1666 QLEPVFEALNTLGNTKWKVNKRILGVVDRIWASGGQLADLVDREDVPLPEEPDTEDXXXX 1487
            QLEPVFEAL+TLG+TKW+VNKR+LGV+DRIWASGG+LADLVDREDVPLPEEPDTED    
Sbjct: 480  QLEPVFEALDTLGSTKWRVNKRVLGVIDRIWASGGRLADLVDREDVPLPEEPDTEDETEI 539

Query: 1486 XXXXXXXXXXXXENSERHSQRCDIELKLAVSRKMKDEDGFYYPHNLDFRGRAYPMHPYLN 1307
                        ENSERHSQRCDIELKLAVSRKMKDE+GFYYPHNLDFRGRAYPMHPYLN
Sbjct: 540  KKWKWKVKAAKKENSERHSQRCDIELKLAVSRKMKDEEGFYYPHNLDFRGRAYPMHPYLN 599

Query: 1306 HLGSDLCRGILEFAEGRPLGKSGLQWLKIHLANLYGSGVDKLSYKGRIAFAENHLEDIFD 1127
            HLGSD+CRGILEFAEGRPLGKSGL+WLKIHLANLY  GVDKLS+  R+AF ENH+++IFD
Sbjct: 600  HLGSDMCRGILEFAEGRPLGKSGLRWLKIHLANLYAGGVDKLSFDERVAFTENHVDEIFD 659

Query: 1126 SADRPLEGKRWWLGAEDPFQCLATCMNLSEALRSPSPETTISHMPVHQDGSCNGLQHYAA 947
            SA RPLEGKRWWLGAEDPFQCLA C+NL EALRSPSPETTIS+MPVHQDGSCNGLQHYAA
Sbjct: 660  SAVRPLEGKRWWLGAEDPFQCLAACINLYEALRSPSPETTISYMPVHQDGSCNGLQHYAA 719

Query: 946  LGRDKLGAAAVNLVAGDKPADVYSGIATRVLDIMKRDAAKDPATDPNVMRARLLINQVDR 767
            LGRDKLGAAAVNLV G+KPADVYSGIA RVLDIM+ DA KDPAT+PN + ARLLINQVDR
Sbjct: 720  LGRDKLGAAAVNLVGGEKPADVYSGIAARVLDIMRSDAEKDPATNPNALHARLLINQVDR 779

Query: 766  KLVKQTVMTSVYGVTYIGARDQIKKRLKERGAIEDDTELFSAACYAAKTTLTALGEMFEA 587
            KLVKQTVMTSVYGVTY+GARDQIK+RLKER  I DD+ LF+AACYAA+TTLTALGEMFEA
Sbjct: 780  KLVKQTVMTSVYGVTYVGARDQIKRRLKERNNIADDSALFNAACYAARTTLTALGEMFEA 839

Query: 586  ARSIMSWLGDCAKIIALENEPVRWTTPLGLPVVQPYRKLGRHLIKTSLQILTLQRETDKV 407
            ARSIMSWLG+CAK+IA EN PV+WTTPLGLPVVQPYR+LGRHLIKTSLQ+LTLQRETDKV
Sbjct: 840  ARSIMSWLGECAKVIASENHPVQWTTPLGLPVVQPYRQLGRHLIKTSLQVLTLQRETDKV 899

Query: 406  MVKRQRTAFPPNFVHSLDGSHMMMTAIACKDAGLNFAGVHDSYWTHACDVDQMNNILREK 227
            MVKRQRTAFPPNFVHSLDGSHMMMTA+ACK AGLNFAGVHDSYWTHACDVD+MN ILREK
Sbjct: 900  MVKRQRTAFPPNFVHSLDGSHMMMTAVACKKAGLNFAGVHDSYWTHACDVDEMNGILREK 959

Query: 226  FVELYDAPILENLLESFQQSFPKLKFPPLPERGDFDLREVLESPYFFN 83
            FVELY+APILENLLE FQ+SFP + FPPLP+RGDFDLR+VLESPYFFN
Sbjct: 960  FVELYNAPILENLLEGFQESFPNMTFPPLPDRGDFDLRDVLESPYFFN 1007


>ref|XP_008389363.1| PREDICTED: DNA-directed RNA polymerase 1, mitochondrial [Malus
            domestica]
          Length = 1007

 Score = 1422 bits (3680), Expect = 0.0
 Identities = 721/1019 (70%), Positives = 819/1019 (80%), Gaps = 41/1019 (4%)
 Frame = -2

Query: 3016 MWRNLSKQSSLRKLNYFSESHSSLPVFCSVRSHQDLSFVERSVPLDLKDYVN-------- 2861
            MWRN +K+ + RK N  S+ H       SV+ +Q+ SF+E++   + ++  N        
Sbjct: 1    MWRNFAKKVASRKXNLSSQFHLGSATSSSVKFYQESSFLEKTRHFEARNCANNRFLVMGF 60

Query: 2860 -------TQNQEL--CFSRDYSFWRNQKIGC---HKFAISSEPFGSTWSSRDYXXXXXXX 2717
                   +Q  EL  C   + S+       C     +A ++E   ST    D        
Sbjct: 61   PQIGDKASQKDELGRCSLMNPSYSHAVSGFCSYARGYASAAEAIASTDGEED-------- 112

Query: 2716 XXXXXEDVDEIQELVEEMNKEIQ--EKGQQKQPKMVGGMGVAKYNMLRRRQIKLETEAWE 2543
                    +EIQEL+E++ +E    E   ++  K+VGGMGV KYN+LR+RQIKLETEAWE
Sbjct: 113  ----SSGSEEIQELLEDLIRENNKVESHFKQTKKVVGGMGVGKYNLLRKRQIKLETEAWE 168

Query: 2542 EAAKEYQELLVDMCEQKLAPNLPYVKSLFLGWFEPLRDAIAAEQELCKKGKNRKSYAPNF 2363
            EAA EYQELLVDMCEQKLAPNLPY+KSLFLGWFEPLR+AIA +QE C++  +R S+AP F
Sbjct: 169  EAANEYQELLVDMCEQKLAPNLPYIKSLFLGWFEPLRNAIAEDQEACRQPNSRASHAPYF 228

Query: 2362 DLLPAGMMAVIT-XXXXXXXXXXXXXXGSARVVQAACHIGEAIEQEARIHRFLEKT-KTK 2189
            D LPA  MAVIT               GS RVVQAAC IGEAIE E RIHRFLEKT K K
Sbjct: 229  DHLPADKMAVITMHKLMGLLMTNNGGVGSVRVVQAACAIGEAIENEVRIHRFLEKTKKKK 288

Query: 2188 NALNRSSEEEPDPA---------------VKEQERLRKKVNILMKKQKLHQVRKIVKQQD 2054
            N  ++  E+E DP                 KE+ERLRKKVN L+KKQK+ QVR+IVK+Q+
Sbjct: 289  NLTDKKPEDESDPVAIEQEKLTISEQEKLTKEKERLRKKVNKLIKKQKMKQVREIVKEQE 348

Query: 2053 DLKPWGQDAQVKIGCRLIQILMETAHIQPPVDQLEDGPPDIRPAFVHSLKTV--ETQRGS 1880
            DLKPWGQ+A VK+GCRLIQ+LM+TA+IQPPVDQ  D   DIRPAFVH LKTV  +TQ+ S
Sbjct: 349  DLKPWGQEAHVKVGCRLIQLLMDTAYIQPPVDQSGDASLDIRPAFVHVLKTVTKDTQKTS 408

Query: 1879 RRYGVIECDPLVRKGLEKTARHMVIPYMPMLVPPLHWTGYDRGAYLFLPSYIMRTHGAKQ 1700
            RRYG+IECDPLV KG+EKTARHMVIPYMPMLVPP++WTGYDRGAYLFLPSY+MRTHGAKQ
Sbjct: 409  RRYGMIECDPLVHKGMEKTARHMVIPYMPMLVPPINWTGYDRGAYLFLPSYVMRTHGAKQ 468

Query: 1699 QREAVKRVPRKQLEPVFEALNTLGNTKWKVNKRILGVVDRIWASGGQLADLVDREDVPLP 1520
            QR+ VKR PR QLEPVFEAL+TLG+TKW+VNKR+LGV+DRIWA+GG LADLVDREDVPLP
Sbjct: 469  QRQVVKRTPRTQLEPVFEALDTLGSTKWRVNKRVLGVIDRIWANGGHLADLVDREDVPLP 528

Query: 1519 EEPDTEDXXXXXXXXXXXXXXXXENSERHSQRCDIELKLAVSRKMKDEDGFYYPHNLDFR 1340
            EEPDTED                ENSERHSQRCDIELKLAVSRKMKDE+GFYYPHNLDFR
Sbjct: 529  EEPDTEDETEIKKWKWKVKDAKKENSERHSQRCDIELKLAVSRKMKDEEGFYYPHNLDFR 588

Query: 1339 GRAYPMHPYLNHLGSDLCRGILEFAEGRPLGKSGLQWLKIHLANLYGSGVDKLSYKGRIA 1160
            GRAYPMHPYLNHLGSD+CRGILEF+EGR LGKSGL+WLKIHLANLY  GVDKLS+ GR+A
Sbjct: 589  GRAYPMHPYLNHLGSDMCRGILEFSEGRRLGKSGLRWLKIHLANLYAGGVDKLSFDGRVA 648

Query: 1159 FAENHLEDIFDSADRPLEGKRWWLGAEDPFQCLATCMNLSEALRSPSPETTISHMPVHQD 980
            F ENH+++IFDSADR LEG+RWWLGAEDPFQCLA C+NL+EALRSPSPETT+S+MPVHQD
Sbjct: 649  FTENHVDEIFDSADRXLEGRRWWLGAEDPFQCLAACINLAEALRSPSPETTVSYMPVHQD 708

Query: 979  GSCNGLQHYAALGRDKLGAAAVNLVAGDKPADVYSGIATRVLDIMKRDAAKDPATDPNVM 800
            GSCNGLQHYAALGRDKLGAAAVNLV G+KPADVYSGIA RVLDIM+ DA KDPAT+PN +
Sbjct: 709  GSCNGLQHYAALGRDKLGAAAVNLVGGEKPADVYSGIAARVLDIMRSDAEKDPATNPNAL 768

Query: 799  RARLLINQVDRKLVKQTVMTSVYGVTYIGARDQIKKRLKERGAIEDDTELFSAACYAAKT 620
             ARLL+NQVDRKLVKQTVMTSVYGVTY+GARDQIK+RLKERG I DD+ LF+AACYAA+T
Sbjct: 769  HARLLVNQVDRKLVKQTVMTSVYGVTYVGARDQIKRRLKERGNIADDSALFAAACYAART 828

Query: 619  TLTALGEMFEAARSIMSWLGDCAKIIALENEPVRWTTPLGLPVVQPYRKLGRHLIKTSLQ 440
            TLTALGEMFEAARSIMSWLG+CAK+IA EN PVRWTTPLGLPVVQPYR+LGRHLIKTSLQ
Sbjct: 829  TLTALGEMFEAARSIMSWLGECAKVIASENHPVRWTTPLGLPVVQPYRQLGRHLIKTSLQ 888

Query: 439  ILTLQRETDKVMVKRQRTAFPPNFVHSLDGSHMMMTAIACKDAGLNFAGVHDSYWTHACD 260
            +LTLQRETDKVMVKRQRTAFPPNFVHSLDGSHMMMTA+ACK AGLNFAGVHDSYWTHACD
Sbjct: 889  VLTLQRETDKVMVKRQRTAFPPNFVHSLDGSHMMMTAVACKKAGLNFAGVHDSYWTHACD 948

Query: 259  VDQMNNILREKFVELYDAPILENLLESFQQSFPKLKFPPLPERGDFDLREVLESPYFFN 83
            VD+MN ILREKFVELY+APILENLLESFQ+SFP L FPPLP+RGDFDLR+VLESPYFFN
Sbjct: 949  VDEMNRILREKFVELYEAPILENLLESFQESFPNLTFPPLPDRGDFDLRDVLESPYFFN 1007


>ref|XP_008339743.1| PREDICTED: DNA-directed RNA polymerase 1B, mitochondrial-like [Malus
            domestica]
          Length = 1007

 Score = 1420 bits (3676), Expect = 0.0
 Identities = 723/1019 (70%), Positives = 820/1019 (80%), Gaps = 41/1019 (4%)
 Frame = -2

Query: 3016 MWRNLSKQSSLRKLNYFSESHSSLPVFCSVRSHQDLSFVERSVPLDLKDYVN-------- 2861
            MWRN +K+ + RK N  S+ H       SV+  Q+ SF++++   + ++ VN        
Sbjct: 1    MWRNFAKKVASRKANPSSQFHLGSATSSSVKFSQESSFIKKTRHFEARNCVNSRLLVMGF 60

Query: 2860 -------TQNQEL--CFSRDYSFWRNQKIGC---HKFAISSEPFGSTWSSRDYXXXXXXX 2717
                   +Q  EL  C   + S++      C     +A ++E   ST    +        
Sbjct: 61   RKIGDTASQKDELGRCSLLNPSYFHGVSGFCSYARGYASAAEAIASTDGDEE-------- 112

Query: 2716 XXXXXEDVDEIQELVEEMNKEIQE-KGQQKQP-KMVGGMGVAKYNMLRRRQIKLETEAWE 2543
                    +EIQEL+E++ +E  + +   KQP K+V G+GV KYN LR+RQIKLETEAWE
Sbjct: 113  ----SSGSEEIQELLEDLIRENNKVESHFKQPKKVVAGIGVGKYNXLRKRQIKLETEAWE 168

Query: 2542 EAAKEYQELLVDMCEQKLAPNLPYVKSLFLGWFEPLRDAIAAEQELCKKGKNRKSYAPNF 2363
            EAA EYQELLVDMCEQKLAPNLPY+KSLFLGWFEPLR+AIA +QE C++  NR S+AP  
Sbjct: 169  EAANEYQELLVDMCEQKLAPNLPYIKSLFLGWFEPLRNAIAEDQEACRQPHNRVSHAPYI 228

Query: 2362 DLLPAGMMAVIT-XXXXXXXXXXXXXXGSARVVQAACHIGEAIEQEARIHRFLEKT-KTK 2189
            DLLPA  MAVIT               GS RVVQAAC IGEAIE E RIHRFL+KT K K
Sbjct: 229  DLLPADKMAVITMHKLMGLLMTNNGGVGSVRVVQAACAIGEAIENEVRIHRFLDKTKKKK 288

Query: 2188 NALNRSSEEEPDPAV---------------KEQERLRKKVNILMKKQKLHQVRKIVKQQD 2054
            N  ++  E+E DP +               KEQERLRKKVN L+KKQK+ QVR+IVK+Q+
Sbjct: 289  NPTDKKPEDESDPVIIEQEQLSISEQEKLTKEQERLRKKVNKLIKKQKMKQVREIVKEQE 348

Query: 2053 DLKPWGQDAQVKIGCRLIQILMETAHIQPPVDQLEDGPPDIRPAFVHSLKTV--ETQRGS 1880
            DLKPWGQ+A VK+GCRLIQ+LM+TA+IQPPVDQ  D P DIRPAFVH LKT+  +TQ+ S
Sbjct: 349  DLKPWGQEAHVKVGCRLIQLLMDTAYIQPPVDQSGDDPLDIRPAFVHVLKTITKDTQKTS 408

Query: 1879 RRYGVIECDPLVRKGLEKTARHMVIPYMPMLVPPLHWTGYDRGAYLFLPSYIMRTHGAKQ 1700
            RRYGVIECDPLVRKG+EK+ARHMVIPYMPMLVPP++WTGYDRGAYLFLPSY+MRTHGAKQ
Sbjct: 409  RRYGVIECDPLVRKGMEKSARHMVIPYMPMLVPPINWTGYDRGAYLFLPSYVMRTHGAKQ 468

Query: 1699 QREAVKRVPRKQLEPVFEALNTLGNTKWKVNKRILGVVDRIWASGGQLADLVDREDVPLP 1520
            QR+ VKR PR QLEPVFEAL+TLG+TKW+VNKR+LGV+DRIWASGG+LADLVDREDVPLP
Sbjct: 469  QRQVVKRTPRXQLEPVFEALDTLGSTKWRVNKRVLGVIDRIWASGGRLADLVDREDVPLP 528

Query: 1519 EEPDTEDXXXXXXXXXXXXXXXXENSERHSQRCDIELKLAVSRKMKDEDGFYYPHNLDFR 1340
            EEPDTED                ENSERHSQRCDIELKLAVSRKMKDE+GFYYPHNLDFR
Sbjct: 529  EEPDTEDETEIKKWKWKVKAAKKENSERHSQRCDIELKLAVSRKMKDEEGFYYPHNLDFR 588

Query: 1339 GRAYPMHPYLNHLGSDLCRGILEFAEGRPLGKSGLQWLKIHLANLYGSGVDKLSYKGRIA 1160
            GRAYPMHPYLNHLGSD+CRGILEFAEGR LGKSGLQWLKIHLANLY  GVDKLS+  R+A
Sbjct: 589  GRAYPMHPYLNHLGSDMCRGILEFAEGRRLGKSGLQWLKIHLANLYAGGVDKLSFDERVA 648

Query: 1159 FAENHLEDIFDSADRPLEGKRWWLGAEDPFQCLATCMNLSEALRSPSPETTISHMPVHQD 980
            F ENH+++IFDSA RPLEG+RWWLGAEDPFQCLA C+NL EALRSPSPETTIS+MPVHQD
Sbjct: 649  FTENHVDEIFDSAVRPLEGRRWWLGAEDPFQCLAACINLYEALRSPSPETTISYMPVHQD 708

Query: 979  GSCNGLQHYAALGRDKLGAAAVNLVAGDKPADVYSGIATRVLDIMKRDAAKDPATDPNVM 800
            GSCNGLQHYAALGRDKLGAAAVNLV G+KPADVYSGIA RVLDIM+ DA KDPAT+PN +
Sbjct: 709  GSCNGLQHYAALGRDKLGAAAVNLVGGEKPADVYSGIAXRVLDIMRSDAEKDPATNPNAL 768

Query: 799  RARLLINQVDRKLVKQTVMTSVYGVTYIGARDQIKKRLKERGAIEDDTELFSAACYAAKT 620
             ARLLINQVDRKLVKQTVMTSVYGVTY+GARDQIK+RLKER  I DD+ LF+AACYAA+T
Sbjct: 769  HARLLINQVDRKLVKQTVMTSVYGVTYVGARDQIKRRLKERNNIADDSALFAAACYAART 828

Query: 619  TLTALGEMFEAARSIMSWLGDCAKIIALENEPVRWTTPLGLPVVQPYRKLGRHLIKTSLQ 440
            TLTALGEMFEAARSIMSWLG+CAK+IA EN PV+WTTPLGLPVVQPYR+LGRHLIKTSLQ
Sbjct: 829  TLTALGEMFEAARSIMSWLGECAKVIASENHPVQWTTPLGLPVVQPYRQLGRHLIKTSLQ 888

Query: 439  ILTLQRETDKVMVKRQRTAFPPNFVHSLDGSHMMMTAIACKDAGLNFAGVHDSYWTHACD 260
            +LTLQRETDKVMVKRQRTAFPPNFVHSLDGSHMMMTA+ACK AGLNFAGVHDSYWTHACD
Sbjct: 889  VLTLQRETDKVMVKRQRTAFPPNFVHSLDGSHMMMTAVACKKAGLNFAGVHDSYWTHACD 948

Query: 259  VDQMNNILREKFVELYDAPILENLLESFQQSFPKLKFPPLPERGDFDLREVLESPYFFN 83
            VD+MN ILREKFVELYDAPILENLLE FQ+SFP + FPPLP+RGDFDLR+VLESPYFFN
Sbjct: 949  VDEMNRILREKFVELYDAPILENLLEGFQESFPNMTFPPLPDRGDFDLRDVLESPYFFN 1007


>emb|CDP00493.1| unnamed protein product [Coffea canephora]
          Length = 808

 Score = 1420 bits (3675), Expect = 0.0
 Identities = 683/808 (84%), Positives = 748/808 (92%)
 Frame = -2

Query: 2506 MCEQKLAPNLPYVKSLFLGWFEPLRDAIAAEQELCKKGKNRKSYAPNFDLLPAGMMAVIT 2327
            MCEQKLAPNLPY+KSLFLGWFEPL+DAIAAEQ+LCK GKNR +YA  FD LPA MMAVIT
Sbjct: 1    MCEQKLAPNLPYIKSLFLGWFEPLKDAIAAEQDLCKDGKNRGAYAQYFDQLPAEMMAVIT 60

Query: 2326 XXXXXXXXXXXXXXGSARVVQAACHIGEAIEQEARIHRFLEKTKTKNALNRSSEEEPDPA 2147
                          GSARVVQAACHIGEAIE E RIH+FLEKTK KNA+N++ E+E +P 
Sbjct: 61   MHKLMGLLMTGGGYGSARVVQAACHIGEAIEHEVRIHKFLEKTKRKNAMNKNPEKETEPV 120

Query: 2146 VKEQERLRKKVNILMKKQKLHQVRKIVKQQDDLKPWGQDAQVKIGCRLIQILMETAHIQP 1967
             K ++RLRKKVN+LMKKQKLHQVR+IVK  D  KPWGQDAQVK+GCRLIQI+META+IQP
Sbjct: 121  AKAEDRLRKKVNVLMKKQKLHQVREIVKHHDASKPWGQDAQVKVGCRLIQIMMETAYIQP 180

Query: 1966 PVDQLEDGPPDIRPAFVHSLKTVETQRGSRRYGVIECDPLVRKGLEKTARHMVIPYMPML 1787
            PVDQ EDGPPDIRPAFVH+LKTVETQRGSRRYGVIECDPLVRKGLE+TA+HMVIPYMPML
Sbjct: 181  PVDQFEDGPPDIRPAFVHTLKTVETQRGSRRYGVIECDPLVRKGLERTAKHMVIPYMPML 240

Query: 1786 VPPLHWTGYDRGAYLFLPSYIMRTHGAKQQREAVKRVPRKQLEPVFEALNTLGNTKWKVN 1607
            VPPL+WTGYDRGAYLFLPSYIMRTHGAKQQREA++R P++QLEPVF+AL+TLG+TKW+VN
Sbjct: 241  VPPLNWTGYDRGAYLFLPSYIMRTHGAKQQREALRRCPKQQLEPVFQALDTLGSTKWRVN 300

Query: 1606 KRILGVVDRIWASGGQLADLVDREDVPLPEEPDTEDXXXXXXXXXXXXXXXXENSERHSQ 1427
            KR+LGV+DRIWASGG+LADLVDR+D+PLPEEPDTED                ENSERHSQ
Sbjct: 301  KRVLGVIDRIWASGGRLADLVDRDDIPLPEEPDTEDEREIRKWKWKVNNVKKENSERHSQ 360

Query: 1426 RCDIELKLAVSRKMKDEDGFYYPHNLDFRGRAYPMHPYLNHLGSDLCRGILEFAEGRPLG 1247
            RCDIELKLAV+RKMKDE+GF+YPHNLDFRGRAYPMHP+LNHLGSDLCRGILEFAEGRPLG
Sbjct: 361  RCDIELKLAVARKMKDEEGFFYPHNLDFRGRAYPMHPHLNHLGSDLCRGILEFAEGRPLG 420

Query: 1246 KSGLQWLKIHLANLYGSGVDKLSYKGRIAFAENHLEDIFDSADRPLEGKRWWLGAEDPFQ 1067
             SGL WLKIHLAN+YG GVDKLS++GR AFAENHLEDIFDSADRPLEG+RWWL AED FQ
Sbjct: 421  NSGLNWLKIHLANVYGGGVDKLSHEGRAAFAENHLEDIFDSADRPLEGRRWWLNAEDSFQ 480

Query: 1066 CLATCMNLSEALRSPSPETTISHMPVHQDGSCNGLQHYAALGRDKLGAAAVNLVAGDKPA 887
            CLATCMNLSEALRSPSPETT+SH+P+HQDGSCNGLQHYAALGRDKLGAAAVNLVAG+KPA
Sbjct: 481  CLATCMNLSEALRSPSPETTMSHLPIHQDGSCNGLQHYAALGRDKLGAAAVNLVAGEKPA 540

Query: 886  DVYSGIATRVLDIMKRDAAKDPATDPNVMRARLLINQVDRKLVKQTVMTSVYGVTYIGAR 707
            DVYSGIA RVLDIM+RDAA+DPA+DPNV+RARLLINQVDRKLVKQTVMTSVYGVTYIGAR
Sbjct: 541  DVYSGIAARVLDIMQRDAARDPASDPNVLRARLLINQVDRKLVKQTVMTSVYGVTYIGAR 600

Query: 706  DQIKKRLKERGAIEDDTELFSAACYAAKTTLTALGEMFEAARSIMSWLGDCAKIIALENE 527
            DQIK+RLKER AIE++ ELFSAACYAAKTTLTALGEMFEAARSIMSWLGDCAK+IA+EN+
Sbjct: 601  DQIKRRLKERCAIEEEAELFSAACYAAKTTLTALGEMFEAARSIMSWLGDCAKVIAMENQ 660

Query: 526  PVRWTTPLGLPVVQPYRKLGRHLIKTSLQILTLQRETDKVMVKRQRTAFPPNFVHSLDGS 347
            PVRWTTPLGLPVVQPYRKLGRHLIKTSLQ+LTLQRETDKVMVKRQRTAFPPNFVHSLDGS
Sbjct: 661  PVRWTTPLGLPVVQPYRKLGRHLIKTSLQVLTLQRETDKVMVKRQRTAFPPNFVHSLDGS 720

Query: 346  HMMMTAIACKDAGLNFAGVHDSYWTHACDVDQMNNILREKFVELYDAPILENLLESFQQS 167
            HMMMTAIAC++AGLNFAGVHDSYWTHACDVDQMN ILR+KFVELY+APILE+LL++FQ+S
Sbjct: 721  HMMMTAIACREAGLNFAGVHDSYWTHACDVDQMNKILRQKFVELYEAPILEDLLDNFQKS 780

Query: 166  FPKLKFPPLPERGDFDLREVLESPYFFN 83
            FPKLKFPPLPERGDFDLREVLESPYFFN
Sbjct: 781  FPKLKFPPLPERGDFDLREVLESPYFFN 808


>ref|XP_009356470.1| PREDICTED: DNA-directed RNA polymerase 1, mitochondrial-like [Pyrus x
            bretschneideri]
          Length = 1007

 Score = 1412 bits (3654), Expect = 0.0
 Identities = 714/1019 (70%), Positives = 817/1019 (80%), Gaps = 41/1019 (4%)
 Frame = -2

Query: 3016 MWRNLSKQSSLRKLNYFSESHSSLPVFCSVRSHQDLSFVERSVPLDLKDYVN-------- 2861
            MWRN +K+ + RK N  S+ H       SV+ +Q+ SF+E++   + ++  N        
Sbjct: 1    MWRNFAKKVASRKANLSSQFHLGSATSSSVKFYQESSFLEKTRHFEARNCANNGFLVMGF 60

Query: 2860 -------TQNQEL--CFSRDYSFWRNQKIGC---HKFAISSEPFGSTWSSRDYXXXXXXX 2717
                   +Q  EL  C   + S+       C     +A ++E   ST    D        
Sbjct: 61   RQIGDKASQKDELGRCSLMNPSYSHAVSGFCSYARGYASAAEAIASTDGEED-------- 112

Query: 2716 XXXXXEDVDEIQELVEEMNKEIQ--EKGQQKQPKMVGGMGVAKYNMLRRRQIKLETEAWE 2543
                    +EI+EL++++ +E    E   ++  K+VGGMGV KYN+LR+RQIKLETEAWE
Sbjct: 113  ----SSGSEEIEELLDDLIRENNKVESHFKQTKKVVGGMGVGKYNLLRKRQIKLETEAWE 168

Query: 2542 EAAKEYQELLVDMCEQKLAPNLPYVKSLFLGWFEPLRDAIAAEQELCKKGKNRKSYAPNF 2363
            EAA EYQELLVDMCEQKLAPNLPY+KSLFLGWFEPLR+AIA +QE C++  +R S+AP F
Sbjct: 169  EAANEYQELLVDMCEQKLAPNLPYIKSLFLGWFEPLRNAIAEDQEACRQPNSRVSHAPYF 228

Query: 2362 DLLPAGMMAVIT-XXXXXXXXXXXXXXGSARVVQAACHIGEAIEQEARIHRFLEKT-KTK 2189
            D LPA  MAVIT               GS RVVQAAC IGEAIE E RIHRFLEKT K K
Sbjct: 229  DHLPADKMAVITMHKLMGLLMTNNGGVGSVRVVQAACAIGEAIENEVRIHRFLEKTKKKK 288

Query: 2188 NALNRSSEEEPDPA---------------VKEQERLRKKVNILMKKQKLHQVRKIVKQQD 2054
            N  ++  E+E DP                 KE+ERLRKKVN L+KKQK+ QVR+IVK+Q+
Sbjct: 289  NLTDKKPEDESDPVAIEQEKLTISEQEELTKEKERLRKKVNKLIKKQKMKQVREIVKEQE 348

Query: 2053 DLKPWGQDAQVKIGCRLIQILMETAHIQPPVDQLEDGPPDIRPAFVHSLKTV--ETQRGS 1880
            DLKPWGQ+A VK+GCRLIQ+LM+TA+IQPPVDQ  DG  DIRPAFVH LKT+  +TQ+ S
Sbjct: 349  DLKPWGQEAHVKVGCRLIQLLMDTAYIQPPVDQSGDGSLDIRPAFVHVLKTITKDTQKTS 408

Query: 1879 RRYGVIECDPLVRKGLEKTARHMVIPYMPMLVPPLHWTGYDRGAYLFLPSYIMRTHGAKQ 1700
            RRYGVI+CDPLVRKG+EKTARHMVIPYMPMLVPP++WTGYDRGAYLFLPSY+MRTHGAKQ
Sbjct: 409  RRYGVIQCDPLVRKGMEKTARHMVIPYMPMLVPPINWTGYDRGAYLFLPSYVMRTHGAKQ 468

Query: 1699 QREAVKRVPRKQLEPVFEALNTLGNTKWKVNKRILGVVDRIWASGGQLADLVDREDVPLP 1520
            QR+ VKR PR QLEPVFEAL+TLG+TKW+VNKR+LGV+DRIWA+GG LADLVDREDVPLP
Sbjct: 469  QRQVVKRTPRTQLEPVFEALDTLGSTKWRVNKRVLGVIDRIWANGGHLADLVDREDVPLP 528

Query: 1519 EEPDTEDXXXXXXXXXXXXXXXXENSERHSQRCDIELKLAVSRKMKDEDGFYYPHNLDFR 1340
            EEPDTED                EN ERHSQRCDIELKLAVSRKMKDE+GFYYPHNLDFR
Sbjct: 529  EEPDTEDETEIKKWKWKVKDAKKENCERHSQRCDIELKLAVSRKMKDEEGFYYPHNLDFR 588

Query: 1339 GRAYPMHPYLNHLGSDLCRGILEFAEGRPLGKSGLQWLKIHLANLYGSGVDKLSYKGRIA 1160
            GRAYPMHPYLNHLGSD+CR ILEF+EGR LGK GL+WLKIHLANLY   VDKLS+ GR+A
Sbjct: 589  GRAYPMHPYLNHLGSDMCRSILEFSEGRRLGKLGLRWLKIHLANLYAGAVDKLSFDGRVA 648

Query: 1159 FAENHLEDIFDSADRPLEGKRWWLGAEDPFQCLATCMNLSEALRSPSPETTISHMPVHQD 980
            F ENH+++IFDSADRPLEG+RWWLGAEDPFQCLA C+NL+EALRSPSPETT+S+MPVHQD
Sbjct: 649  FTENHVDEIFDSADRPLEGRRWWLGAEDPFQCLAACINLAEALRSPSPETTVSYMPVHQD 708

Query: 979  GSCNGLQHYAALGRDKLGAAAVNLVAGDKPADVYSGIATRVLDIMKRDAAKDPATDPNVM 800
            GSCNGLQHYAALGRD+LGAAAVNLV G+KPADVYSGIA RVLDIM+ DA KDPAT+PN +
Sbjct: 709  GSCNGLQHYAALGRDRLGAAAVNLVGGEKPADVYSGIAARVLDIMRSDAEKDPATNPNAL 768

Query: 799  RARLLINQVDRKLVKQTVMTSVYGVTYIGARDQIKKRLKERGAIEDDTELFSAACYAAKT 620
             ARLL+NQVDRKLVKQTVMTSVYGVTY+GARDQIK+RLKERG I DD+ LF+AACYAA+T
Sbjct: 769  HARLLVNQVDRKLVKQTVMTSVYGVTYVGARDQIKRRLKERGNISDDSALFAAACYAART 828

Query: 619  TLTALGEMFEAARSIMSWLGDCAKIIALENEPVRWTTPLGLPVVQPYRKLGRHLIKTSLQ 440
            TLTALGEMFEAARSIMSWLG+CAK+IA EN PV+WTTPLGLPVVQPYR+LGRHLIKTSLQ
Sbjct: 829  TLTALGEMFEAARSIMSWLGECAKVIASENHPVQWTTPLGLPVVQPYRQLGRHLIKTSLQ 888

Query: 439  ILTLQRETDKVMVKRQRTAFPPNFVHSLDGSHMMMTAIACKDAGLNFAGVHDSYWTHACD 260
            +LTLQRETDKVMVKRQRTAFPPNFVHSLDGSHMMMTA+ACK AGLNFAGVHDSYWTHACD
Sbjct: 889  VLTLQRETDKVMVKRQRTAFPPNFVHSLDGSHMMMTAVACKKAGLNFAGVHDSYWTHACD 948

Query: 259  VDQMNNILREKFVELYDAPILENLLESFQQSFPKLKFPPLPERGDFDLREVLESPYFFN 83
            VD+MN ILREKFVELY APILENLLESFQ+SFP L FPPLP+RGDFDLR+VLESPYFF+
Sbjct: 949  VDEMNRILREKFVELYKAPILENLLESFQESFPNLTFPPLPDRGDFDLRDVLESPYFFH 1007